F075878

General Info

Members Datasets Scaffolds Average Seq Length
113 87 109 474

Family's Representative Sequence

Representative Sequence 3300049571|Ga0501034_0000219|Ga0501034_0000219_104351_106063
Length 544
Sequence MSSHELSSAGEGIDRRTLLKSLTAVGLAAAASACAETAAQGPAWREAPLLTSAPPQPLGRRRRYAIVGTGGRHNMFRRAILDAYKDHAELVGLCDRNPGRVDLARRDTAQRGINVPGYAHTDFDQMIRETKPDTVIVTTVDGTHHGYMIRAMELGCDVISEKPMTTTAEKCQQILDAKARTGKNVRVTFNYRYAPPRTQVKDLLMSGVIGDILSVDFHWLLNTTHGADYFRRWHSNKVNSGGLMIHKASHHFDLVNWWLGAVPVSVFATGKREFYTPTMARRLGLMSHHERCLTCPEKTKCTFYMDLAASNHKQLYLEQEKYDGYFRDKCVWRPDIDIEDTMNVTVRYNTGTTLSYSLNAFNAWEGYHVAFNGTKGRLEHSIVEDGKVFADNTVVGAAVAGGVSTRIIPMRSPARSVTPWSGQGGHGGGDEIMLRDIFVSPTAHEAPATTSGDVEFPEGSAPPIARATGPHDKYLRASDERAGAAAILVGVAANRCFVEKKPVEIGSLVSGLRMPVYAPMPGKGERVPMPPAVQXATRAGAAPA

Samples

Sample ID Description Type Environment
1 2738541280 Massilia sp. GV090 Isolate Unclassified
2 2739367756 Asticcacaulis sp. CF398 Isolate Unclassified
3 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
26 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
27 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
28 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
45 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
46 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
47 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
48 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
49 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
50 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
51 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
52 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
53 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
54 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
55 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
56 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
57 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
58 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
59 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
60 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
61 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
62 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
63 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
64 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
65 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
66 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
67 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
68 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
69 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
70 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
71 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
72 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
73 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
74 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
75 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
78 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
79 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
80 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
81 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
82 3300049764 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J12_A_4_control Metagenome Rhizosphere
83 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
84 3300053124 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 endosphere Metagenome Endosphere
85 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
86 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
87 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.46
Metatranscriptomes 0
Isolates 3.54

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.42
Nodule 0
Rhizoplane 0.88
Rhizosphere 84.07
Stem 0
Stem Tuber 0
Unclassified 10.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10040992 3300003320 Bacteria 3150
2 rootL2_10142937 3300003322 Bacteria 3265
3 Ga0055537_1001600 3300003773 Bacteria 8535
4 Ga0070690_100015412 3300005330 Bacteria 4558
5 Ga0070690_100029991 3300005330 Bacteria 3377
6 Ga0070670_100094814 3300005331 Bacteria 2567
7 Ga0070689_100018260 3300005340 Bacteria 5164
8 Ga0070689_100091859 3300005340 Bacteria 2394
9 Ga0070691_10016141 3300005341 Bacteria 3432
10 Ga0070687_100002964 3300005343 Bacteria 6516
11 Ga0070668_100015900 3300005347 Bacteria 5629
12 Ga0070669_100007547 3300005353 Bacteria 7787
13 Ga0070675_100167164 3300005354 Bacteria 1895
14 Ga0070674_100027854 3300005356 Bacteria 3706
15 Ga0070673_100019108 3300005364 Bacteria 4915
16 Ga0070688_100038603 3300005365 Bacteria 2918
17 Ga0070688_100053634 3300005365 Bacteria 2523
18 Ga0070688_100057020 3300005365 Bacteria 2454
19 Ga0070662_100044830 3300005457 Bacteria 3170
20 Ga0070685_10012960 3300005466 Bacteria 4390
21 Ga0068853_100129000 3300005539 Bacteria 2262
22 Ga0070686_100005972 3300005544 Bacteria 6753
23 Ga0070686_100089955 3300005544 Bacteria 2051
24 Ga0070665_100000473 3300005548 Bacteria 57982
25 Ga0070717_10000037 3300006028 Bacteria 121470
26 Ga0105240_10316680 3300009093 Unclassified 1779
27 Ga0105243_10022616 3300009148 Bacteria 4780
28 Ga0105248_10260907 3300009177 Bacteria 1950
29 Ga0163163_10030900 3300014325 Bacteria 5164
30 Ga0207680_10104108 3300025903 Bacteria 1829
31 Ga0207645_10017061 3300025907 Bacteria 4797
32 Ga0207662_10006041 3300025918 Bacteria 6509
33 Ga0207681_10001271 3300025923 Bacteria 16284
34 Ga0207650_10079287 3300025925 Bacteria 2487
35 Ga0207659_10029852 3300025926 Bacteria 3720
36 Ga0207644_10126415 3300025931 Bacteria 1952
37 Ga0207670_10007973 3300025936 Bacteria 5950
38 Ga0207704_10001523 3300025938 Bacteria 10386
39 Ga0207691_10038763 3300025940 Bacteria 4410
40 Ga0207651_10005852 3300025960 Bacteria 6356
41 Ga0207658_10048018 3300025986 Bacteria 3128
42 Ga0207677_10150987 3300026023 Bacteria 1792
43 Ga0207639_10149991 3300026041 Bacteria 1952
44 Ga0207675_100012338 3300026118 Bacteria 7983
45 Ga0268266_10000061 3300028379 Bacteria 255207
46 Ga0265318_10000188 3300028577 Bacteria 55134
47 Ga0265323_10001374 3300028653 Bacteria 12052
48 Ga0265323_10032833 3300028653 Bacteria 1925
49 Ga0307515_10150063 3300028794 Bacteria 2442
50 Ga0265320_10005232 3300031240 Bacteria 8366
51 Ga0265331_10026720 3300031250 Bacteria 2898
52 Ga0265316_10006342 3300031344 Bacteria 11314
53 Ga0265316_10045425 3300031344 Bacteria 3487
54 Ga0265313_10007440 3300031595 Bacteria 7485
55 Ga0307508_10000024 3300031616 Bacteria 176806
56 Ga0265314_10011475 3300031711 Bacteria 7309
57 Ga0265314_10036882 3300031711 Bacteria 3547
58 Ga0316577_10012740 3300031733 Bacteria 4585
59 Ga0307414_10128816 3300032004 Bacteria 1961
60 Ga0307411_10003536 3300032005 Bacteria 7273
61 Ga0316584_0014681 3300036712 Bacteria 5587
62 Ga0316584_0028252 3300036712 Bacteria 4134
63 Ga0316581_0045625 3300037588 Unclassified 1339
64 Ga0400483_264007 3300039062 Bacteria 1841
65 Ga0451849_0644254 3300041505 Bacteria 3195
66 Ga0451853_0609574 3300041512 Bacteria 5796
67 Ga0439445_0004542 3300042004 Bacteria 3143
68 Ga0451577_0000017 3300042876 Bacteria 523453
69 Ga0451577_0001739 3300042876 Bacteria 28067
70 Ga0451577_0023814 3300042876 Bacteria 5577
71 Ga0451577_0040319 3300042876 Bacteria 4193
72 Ga0451577_0044364 3300042876 Bacteria 3981
73 Ga0453683_0003655 3300044673 Bacteria 11265
74 Ga0453684_0000045 3300044712 Bacteria 582917
75 Ga0453684_0006090 3300044712 Bacteria 23261
76 Ga0453684_0061050 3300044712 Bacteria 4842
77 Ga0453684_0061946 3300044712 Bacteria 4796
78 Ga0453684_0140649 3300044712 Bacteria 2882
79 Ga0453684_0307492 3300044712 Bacteria 1800
80 Ga0451576_0000214 3300045051 Bacteria 144183
81 Ga0451576_0001356 3300045051 Bacteria 42234
82 Ga0451576_0004640 3300045051 Bacteria 17719
83 Ga0451576_0312321 3300045051 Bacteria 1644
84 Ga0495650_0000085 3300046471 Bacteria 235655
85 Ga0495607_0003621 3300046501 Bacteria 11730
86 Ga0495631_0003773 3300046518 Bacteria 8243
87 Ga0495637_0001649 3300046520 Bacteria 12903
88 Ga0495625_0001002 3300046660 Bacteria 37395
89 Ga0495659_0000087 3300046664 Bacteria 40627
90 Ga0496112_0042841 3300048915 Bacteria 4430
91 Ga0496124_0005981 3300048927 Bacteria 13433
92 Ga0495678_000006 3300049459 Bacteria 463690
93 Ga0501034_0000219 3300049571 Bacteria 109174
94 Ga0501034_0055786 3300049571 Bacteria 3976
95 Ga0501034_0156194 3300049571 Bacteria 2255
96 Ga0501046_0000233 3300049580 Bacteria 57393
97 Ga0501047_0001519 3300049581 Bacteria 22666
98 Ga0501047_0005692 3300049581 Bacteria 11728
99 Ga0501070_0078461 3300049586 Bacteria 2733
100 Ga0501073_0011913 3300049589 Bacteria 6348
101 Ga0501080_0077696 3300049742 Bacteria 3087
102 Ga0501083_0001166 3300049744 Bacteria 17691
103 Ga0501267_001864 3300049764 Bacteria 1853
104 Ga0501044_0000491 3300049823 Bacteria 47931
105 Ga0501044_0004144 3300049823 Bacteria 16281
106 Ga0500617_021140 3300053124 Bacteria 2860
107 Ga0500568_0000345 3300053139 Bacteria 36283
108 Ga0500616_0000119 3300053153 Bacteria 143264
109 Ga0500645_001633 3300053730 Bacteria 11054

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300037588 Ga0316581_0045625 Ga0316581_0045625_97_1263 388
2 3300044712 Ga0453684_0061946 Ga0453684_0061946_41_1312 422
3 3300044712 Ga0453684_0140649 Ga0453684_0140649_1554_2825 422
4 3300042876 Ga0451577_0044364 Ga0451577_0044364_2283_3599 437
5 3300044712 Ga0453684_0061050 Ga0453684_0061050_283_1599 437
6 3300025907 Ga0207645_10017061 Ga0207645_100170613 438
7 3300025923 Ga0207681_10001271 Ga0207681_100012713 438
8 3300025938 Ga0207704_10001523 Ga0207704_100015233 438
9 3300025940 Ga0207691_10038763 Ga0207691_100387633 438
10 3300025986 Ga0207658_10048018 Ga0207658_100480183 438
11 3300026041 Ga0207639_10149991 Ga0207639_101499911 438
12 3300049580 Ga0501046_0000233 Ga0501046_0000233_7894_9249 438
13 3300049581 Ga0501047_0001519 Ga0501047_0001519_5362_6717 438
14 3300026023 Ga0207677_10150987 Ga0207677_101509871 442
15 3300049823 Ga0501044_0004144 Ga0501044_0004144_807_2186 442
16 3300049744 Ga0501083_0001166 Ga0501083_0001166_11312_12700 444
17 3300006028 Ga0070717_10000037 Ga0070717_1000003726 446
18 3300005331 Ga0070670_100094814 Ga0070670_1000948142 450
19 3300025925 Ga0207650_10079287 Ga0207650_100792872 450
20 3300053124 Ga0500617_021140 Ga0500617_021140_481_1842 453
21 3300031733 Ga0316577_10012740 Ga0316577_100127405 455
22 3300039062 Ga0400483_264007 Ga0400483_264007_95_1462 455
23 3300044712 Ga0453684_0006090 Ga0453684_0006090_18215_19585 455
24 3300005330 Ga0070690_100029991 Ga0070690_1000299912 456
25 3300005341 Ga0070691_10016141 Ga0070691_100161413 456
26 3300005347 Ga0070668_100015900 Ga0070668_1000159005 456
27 3300005353 Ga0070669_100007547 Ga0070669_1000075475 456
28 3300005356 Ga0070674_100027854 Ga0070674_1000278544 456
29 3300005457 Ga0070662_100044830 Ga0070662_1000448302 456
30 3300005539 Ga0068853_100129000 Ga0068853_1001290001 456
31 3300005544 Ga0070686_100089955 Ga0070686_1000899552 456
32 3300009148 Ga0105243_10022616 Ga0105243_100226164 456
33 3300036712 Ga0316584_0014681 Ga0316584_0014681_171_1547 456
34 3300005365 Ga0070688_100038603 Ga0070688_1000386032 460
35 3300026118 Ga0207675_100012338 Ga0207675_1000123382 460
36 3300009177 Ga0105248_10260907 Ga0105248_102609071 461
37 3300046501 Ga0495607_0003621 Ga0495607_0003621_4801_6234 463
38 3300005330 Ga0070690_100015412 Ga0070690_1000154122 464
39 3300005340 Ga0070689_100018260 Ga0070689_1000182606 464
40 3300005343 Ga0070687_100002964 Ga0070687_1000029644 464
41 3300005544 Ga0070686_100005972 Ga0070686_1000059725 464
42 3300025903 Ga0207680_10104108 Ga0207680_101041081 464
43 3300025918 Ga0207662_10006041 Ga0207662_100060414 464
44 3300025936 Ga0207670_10007973 Ga0207670_100079732 464
45 3300049581 Ga0501047_0005692 Ga0501047_0005692_1535_2932 465
46 iso_pu_bacteria 2786546940 2788435094 468
47 3300031711 Ga0265314_10011475 Ga0265314_100114754 469
48 3300009093 Ga0105240_10316680 Ga0105240_103166801 470
49 3300032005 Ga0307411_10003536 Ga0307411_100035361 470
50 3300046518 Ga0495631_0003773 Ga0495631_0003773_4448_5905 470
51 3300046660 Ga0495625_0001002 Ga0495625_0001002_34333_35781 470
52 3300053139 Ga0500568_0000345 Ga0500568_0000345_8263_9726 470
53 3300053153 Ga0500616_0000119 Ga0500616_0000119_24788_26251 470
54 3300028653 Ga0265323_10001374 Ga0265323_100013747 471
55 3300028653 Ga0265323_10032833 Ga0265323_100328331 471
56 3300031344 Ga0265316_10006342 Ga0265316_100063423 471
57 3300031344 Ga0265316_10045425 Ga0265316_100454252 471
58 3300005365 Ga0070688_100057020 Ga0070688_1000570202 472
59 3300005466 Ga0070685_10012960 Ga0070685_100129604 472
60 3300032004 Ga0307414_10128816 Ga0307414_101288162 472
61 3300005354 Ga0070675_100167164 Ga0070675_1001671641 473
62 3300049589 Ga0501073_0011913 Ga0501073_0011913_4268_5797 474
63 3300048927 Ga0496124_0005981 Ga0496124_0005981_7305_8789 475
64 3300049459 Ga0495678_000006 Ga0495678_000006_189410_190894 475
65 3300044712 Ga0453684_0000045 Ga0453684_0000045_186100_187542 476
66 3300048915 Ga0496112_0042841 Ga0496112_0042841_1774_3213 476
67 iso_pu_bacteria 2739367756 2739793636 476
68 3300045051 Ga0451576_0000214 Ga0451576_0000214_107284_108753 477
69 3300005548 Ga0070665_100000473 Ga0070665_10000047317 478
70 3300025926 Ga0207659_10029852 Ga0207659_100298523 478
71 3300028379 Ga0268266_10000061 Ga0268266_1000006117 478
72 3300041505 Ga0451849_0644254 Ga0451849_0644254_1675_3117 478
73 3300041512 Ga0451853_0609574 Ga0451853_0609574_4283_5725 478
74 3300042876 Ga0451577_0023814 Ga0451577_0023814_2966_4447 478
75 3300045051 Ga0451576_0004640 Ga0451576_0004640_14620_16080 478
76 iso_pu_bacteria 2738541280 2738741680 478
77 3300046664 Ga0495659_0000087 Ga0495659_0000087_34746_36206 479
78 3300005340 Ga0070689_100091859 Ga0070689_1000918592 480
79 3300005364 Ga0070673_100019108 Ga0070673_1000191084 480
80 3300005365 Ga0070688_100053634 Ga0070688_1000536342 480
81 3300025931 Ga0207644_10126415 Ga0207644_101264152 480
82 3300025960 Ga0207651_10005852 Ga0207651_100058524 480
83 3300046471 Ga0495650_0000085 Ga0495650_0000085_60252_61712 481
84 3300046520 Ga0495637_0001649 Ga0495637_0001649_5642_7111 481
85 3300003773 Ga0055537_1001600 Ga0055537_10016004 482
86 3300014325 Ga0163163_10030900 Ga0163163_100309002 482
87 3300042876 Ga0451577_0001739 Ga0451577_0001739_21673_23136 482
88 3300028577 Ga0265318_10000188 Ga0265318_1000018845 483
89 3300031240 Ga0265320_10005232 Ga0265320_100052324 483
90 3300031250 Ga0265331_10026720 Ga0265331_100267201 483
91 3300031595 Ga0265313_10007440 Ga0265313_100074403 483
92 3300031711 Ga0265314_10036882 Ga0265314_100368823 483
93 3300042876 Ga0451577_0040319 Ga0451577_0040319_1344_2819 483
94 3300049764 Ga0501267_001864 Ga0501267_001864_34_1503 483
95 3300036712 Ga0316584_0028252 Ga0316584_0028252_1509_2981 484
96 iso_pu_bacteria 2786546940 2788432897 484
97 3300044712 Ga0453684_0307492 Ga0453684_0307492_130_1668 486
98 3300049571 Ga0501034_0055786 Ga0501034_0055786_1142_2623 486
99 3300049586 Ga0501070_0078461 Ga0501070_0078461_1087_2568 486
100 3300049742 Ga0501080_0077696 Ga0501080_0077696_29_1510 486
101 3300049823 Ga0501044_0000491 Ga0501044_0000491_34590_36071 486
102 3300003322 rootL2_10142937 rootL2_101429372 487
103 3300028794 Ga0307515_10150063 Ga0307515_101500632 487
104 3300031616 Ga0307508_10000024 Ga0307508_1000002468 487
105 3300045051 Ga0451576_0001356 Ga0451576_0001356_4528_6027 487
106 3300049571 Ga0501034_0156194 Ga0501034_0156194_150_1637 487
107 3300053730 Ga0500645_001633 Ga0500645_001633_5985_7472 487
108 3300042004 Ga0439445_0004542 Ga0439445_0004542_230_1711 488
109 3300042876 Ga0451577_0000017 Ga0451577_0000017_22872_24359 488
110 3300044673 Ga0453683_0003655 Ga0453683_0003655_6311_8038 488
111 3300045051 Ga0451576_0312321 Ga0451576_0312321_148_1626 488
112 3300049571 Ga0501034_0000219 Ga0501034_0000219_104351_106063 488
113 3300003320 rootH2_10040992 rootH2_100409922 490

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22725

GFO_IDH_MocA_C3

GFO/IDH/MocA C-terminal domain

198

379

0.96

PF01408

GFO_IDH_MocA

Oxidoreductase family, NAD-binding Rossmann fold

62

189

0.89

PF02894

GFO_IDH_MocA_C

Oxidoreductase family, C-terminal alpha/beta domain

201

392

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
3q2k-assembly1.cif.gz_E crystal structure of the wlba dehydrogenase from bordetella pertussis in complex with nadh and udp-glcnaca 0.8441 35 454
3wg9-assembly2.cif.gz_D crystal structure of rsp, a rex-family repressor 0.837 36 139
3q2k-assembly2.cif.gz_P crystal structure of the wlba dehydrogenase from bordetella pertussis in complex with nadh and udp-glcnaca 0.8356 35 454
1zh8-assembly1.cif.gz_B crystal structure of oxidoreductase (tm0312) from thermotoga maritima at 2.50 a resolution 0.8352 35 459
1zh8-assembly1.cif.gz_B crystal structure of oxidoreductase (tm0312) from thermotoga maritima at 2.50 a resolution 0.8328 35 459
ID Description Score Start End Superfamily
3q2kH01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.907 35 168 3.40.50.720
4hktB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8832 37 164 3.40.50.720
4n54A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8781 35 165 3.40.50.720
3ceaC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8762 35 165 3.40.50.720
2ixbA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8758 35 163 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A0G4MTS9-F1-model_v4 Gfo/Idh/MocA-like oxidoreductase N-terminal domain-containing protein 0.992 36 120
AF-V9GB31-F1-model_v4 Myo-inositol 2-dehydrogenase 1 0.9631 141 460
AF-V9GB31-F1-model_v4 Myo-inositol 2-dehydrogenase 1 0.9543 141 460
AF-A0A7L5A597-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.9427 42 466 GO:0000166
AF-A0A0G4MTS9-F1-model_v4 Gfo/Idh/MocA-like oxidoreductase N-terminal domain-containing protein 0.9372 36 120

Feature Viewer

pLDDT pTM Quality
89.23 0.87 High
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Predicted Structure (AlphaFold2)

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