F075648

General Info

Members Datasets Scaffolds Average Seq Length
113 101 113 348

Family's Representative Sequence

Representative Sequence 3300048088|Ga0495602_0031656|Ga0495602_0031656_2393_3505
Length 370
Sequence VRGRLKLRRGVVVSAEPLTVEVDGERRPAWADAALLGEMREGDEVVVNTEALDLGLGSGGVDLVHVNLTRGLEGGSSSDEHVIKLNYTSLQHPVAPIERPLFDSRHRRGKGTAGQEGGRAERGFPAAGAMPVLVLPLHGYLAPAAWAAGQAAPGSTVGYVQTGGGALPGSLSRDVAQLRERGLLCDHITAAPAYGGEREAISVAGALDAAANSLGWDAAIAGPGPGIIGSDTRLGHGGIAALDTAHASLALGLPTLLSPRLSSADPRERHRPVSHHTLTVLQMLLAPVKIPVPAAEPVPIAVLATAAGWRHRLAEAPVDLPGYRASNLPARTMGRTIQEDPLFFAAALASGRALAQSQPSARSLANQGLR

Samples

Sample ID Description Type Environment
1 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
2 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
3 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
7 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
8 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
9 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
10 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
11 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
12 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
13 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
14 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
15 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
16 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
17 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
18 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
19 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
20 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
21 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
22 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
23 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
24 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
26 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
27 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
28 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
29 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
30 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
48 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
49 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
50 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
51 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
52 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
53 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
54 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
55 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
56 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
57 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
58 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
59 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
60 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
61 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
62 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
63 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
64 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
65 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
66 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
67 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
68 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
69 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
70 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
71 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
72 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
73 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
74 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
75 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
76 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
77 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
78 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
79 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
80 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
81 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
82 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
83 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
84 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
85 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
86 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
87 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
88 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
89 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
90 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
91 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
92 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
93 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
94 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
95 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
97 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
98 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
99 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
100 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
101 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.77
Nodule 0
Rhizoplane 16.81
Rhizosphere 81.42
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100355909 3300005329 Bacteria 1394
2 Ga0070677_10000015 3300005333 Bacteria 52793
3 Ga0070682_100000078 3300005337 Bacteria 87953
4 Ga0068868_100000609 3300005338 Bacteria 24032
5 Ga0070714_100127474 3300005435 Bacteria 2271
6 Ga0070700_100061233 3300005441 Unclassified 2374
7 Ga0070679_100004332 3300005530 Bacteria 13108
8 Ga0070684_100007091 3300005535 Bacteria 8711
9 Ga0070665_100000141 3300005548 Bacteria 135473
10 Ga0068856_100119403 3300005614 Bacteria 2638
11 Ga0068866_10000003 3300005718 Bacteria 281675
12 Ga0068863_100000129 3300005841 Bacteria 79654
13 Ga0068858_100000118 3300005842 Bacteria 83359
14 Ga0068860_100005371 3300005843 Bacteria 12998
15 Ga0075365_10022339 3300006038 Bacteria 3963
16 Ga0075364_10005663 3300006051 Bacteria 7282
17 Ga0070715_10000029 3300006163 Bacteria 88994
18 Ga0070716_100029517 3300006173 Bacteria 2966
19 Ga0097621_100068876 3300006237 Bacteria 2920
20 Ga0075433_10047704 3300006852 Bacteria 3726
21 Ga0075434_100163538 3300006871 Unclassified 2245
22 Ga0075435_100074957 3300007076 Unclassified 2769
23 Ga0105245_10000517 3300009098 Bacteria 35353
24 Ga0114129_10367611 3300009147 Bacteria 1902
25 Ga0105238_10000009 3300009551 Bacteria 288729
26 Ga0157370_10016677 3300013104 Bacteria 7434
27 Ga0157374_10000268 3300013296 Bacteria 48268
28 Ga0157374_10419232 3300013296 Bacteria 1337
29 Ga0157375_10063880 3300013308 Bacteria 3664
30 Ga0163161_10247493 3300017792 Bacteria 1388
31 Ga0207642_10000002 3300025899 Bacteria 658166
32 Ga0207685_10000031 3300025905 Bacteria 77451
33 Ga0207707_10044017 3300025912 Bacteria 3893
34 Ga0207663_10010028 3300025916 Bacteria 5021
35 Ga0207652_10004118 3300025921 Bacteria 11868
36 Ga0207694_10000004 3300025924 Bacteria 967075
37 Ga0207687_10000085 3300025927 Bacteria 68919
38 Ga0207690_10014142 3300025932 Bacteria 4814
39 Ga0207669_10000001 3300025937 Bacteria 377747
40 Ga0207665_10027650 3300025939 Bacteria 3747
41 Ga0207661_10002160 3300025944 Bacteria 13551
42 Ga0207661_10300291 3300025944 Bacteria 1439
43 Ga0207677_10000397 3300026023 Bacteria 29959
44 Ga0207703_10000061 3300026035 Bacteria 132671
45 Ga0207702_10165142 3300026078 Bacteria 2025
46 Ga0207641_10000016 3300026088 Bacteria 307363
47 Ga0268266_10000056 3300028379 Bacteria 289176
48 Ga0268264_10010495 3300028381 Bacteria 7656
49 Ga0265337_1000007 3300028556 Bacteria 98412
50 Ga0265326_10000019 3300028558 Bacteria 137370
51 Ga0265322_10000011 3300028654 Bacteria 167597
52 Ga0265336_10003542 3300028666 Bacteria 6100
53 Ga0265338_10148042 3300028800 Bacteria 1829
54 Ga0265324_10000989 3300029957 Bacteria 17483
55 Ga0265320_10000011 3300031240 Bacteria 249534
56 Ga0265331_10001501 3300031250 Bacteria 17222
57 Ga0265327_10000015 3300031251 Bacteria 496677
58 Ga0265314_10000513 3300031711 Bacteria 49998
59 Ga0307410_10069588 3300031852 Bacteria 2435
60 Ga0307416_100015511 3300032002 Bacteria 5266
61 Ga0307415_100144294 3300032126 Unclassified 1823
62 Ga0395898_0163323 3300037466 Unclassified 2130
63 Ga0395901_0039493 3300038443 Bacteria 4884
64 Ga0466963_0000004 3300044694 Bacteria 102526
65 Ga0466967_0410899 3300045976 Bacteria 1318
66 Ga0495603_0001205 3300046455 Bacteria 15104
67 Ga0495603_0051756 3300046455 Bacteria 2439
68 Ga0495582_0000001 3300046473 Bacteria 252434
69 Ga0495662_0000001 3300046476 Bacteria 179185
70 Ga0495608_0050888 3300046511 Bacteria 2748
71 Ga0495620_0011080 3300046515 Bacteria 4721
72 Ga0495652_0000010 3300046529 Bacteria 261584
73 Ga0495586_0000083 3300046535 Bacteria 57851
74 Ga0495667_0000020 3300046559 Bacteria 180876
75 Ga0495656_0003543 3300046615 Bacteria 5286
76 Ga0495635_0123081 3300046663 Bacteria 1769
77 Ga0495647_0000001 3300046681 Bacteria 222371
78 Ga0495658_0000002 3300046683 Bacteria 309651
79 Ga0495669_0000076 3300046684 Bacteria 65203
80 Ga0495649_0003593 3300046694 Bacteria 10394
81 Ga0495604_0000067 3300047317 Bacteria 90345
82 Ga0495676_0000238 3300047321 Bacteria 44160
83 Ga0495680_0047995 3300047322 Bacteria 3355
84 Ga0495602_0031656 3300048088 Bacteria 4997
85 Ga0496100_0000059 3300048903 Bacteria 65518
86 Ga0496101_0000135 3300048904 Bacteria 65518
87 Ga0496104_0000025 3300048907 Bacteria 228519
88 Ga0496105_0000023 3300048908 Bacteria 156126
89 Ga0496106_0000030 3300048909 Bacteria 136804
90 Ga0496106_0000772 3300048909 Bacteria 23158
91 Ga0496107_0000054 3300048910 Bacteria 60902
92 Ga0496108_0000006 3300048911 Bacteria 469473
93 Ga0496108_0000397 3300048911 Bacteria 35950
94 Ga0496108_0036840 3300048911 Bacteria 4071
95 Ga0496109_0000009 3300048912 Bacteria 236561
96 Ga0496109_0000803 3300048912 Bacteria 26180
97 Ga0496109_0134988 3300048912 Bacteria 2305
98 Ga0496110_0022820 3300048913 Bacteria 5317
99 Ga0496111_0089362 3300048914 Bacteria 2256
100 Ga0496113_0038596 3300048916 Bacteria 3512
101 Ga0496113_0157850 3300048916 Bacteria 1792
102 Ga0496114_0002880 3300048917 Bacteria 13188
103 Ga0496115_0006835 3300048918 Bacteria 8373
104 Ga0501042_0012067 3300049578 Bacteria 5845
105 Ga0501071_0162084 3300049587 Bacteria 1672
106 nmdc:mga05p37_332722_c1 3300050507 Bacteria 1793
107 nmdc:mga0a205_4244_c1 3300050515 Bacteria 3688
108 nmdc:mga0a205_71507_c1 3300050515 Bacteria 3350
109 Ga0495601_0000448 3300053077 Bacteria 21585
110 Ga0495601_0004637 3300053077 Bacteria 7956
111 Ga0495601_0007612 3300053077 Bacteria 6360
112 Ga0495612_0003548 3300053078 Bacteria 6469
113 Ga0495619_0091200 3300053085 Bacteria 2063

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053077 Ga0495601_0004637 Ga0495601_0004637_7018_7920 300
2 3300046511 Ga0495608_0050888 Ga0495608_0050888_17_1015 321
3 3300046455 Ga0495603_0001205 Ga0495603_0001205_63_1031 322
4 3300009098 Ga0105245_10000517 Ga0105245_1000051737 323
5 3300013104 Ga0157370_10016677 Ga0157370_100166773 323
6 3300025927 Ga0207687_10000085 Ga0207687_1000008532 323
7 3300006871 Ga0075434_100163538 Ga0075434_1001635382 328
8 3300007076 Ga0075435_100074957 Ga0075435_1000749572 328
9 3300048912 Ga0496109_0134988 Ga0496109_0134988_671_1657 328
10 3300050515 nmdc:mga0a205_71507_c1 nmdc:mga0a205_71507_c1_612_1694 328
11 3300053085 Ga0495619_0091200 Ga0495619_0091200_989_2050 329
12 3300037466 Ga0395898_0163323 Ga0395898_0163323_870_1892 333
13 3300038443 Ga0395901_0039493 Ga0395901_0039493_2372_3394 333
14 3300013296 Ga0157374_10419232 Ga0157374_104192322 334
15 3300053077 Ga0495601_0007612 Ga0495601_0007612_1479_2537 334
16 3300045976 Ga0466967_0410899 Ga0466967_0410899_37_1125 335
17 3300009147 Ga0114129_10367611 Ga0114129_103676112 336
18 3300028556 Ga0265337_1000007 Ga0265337_100000768 336
19 3300028558 Ga0265326_10000019 Ga0265326_1000001966 336
20 3300028654 Ga0265322_10000011 Ga0265322_1000001166 336
21 3300028666 Ga0265336_10003542 Ga0265336_100035422 336
22 3300028800 Ga0265338_10148042 Ga0265338_101480422 336
23 3300029957 Ga0265324_10000989 Ga0265324_100009894 336
24 3300031240 Ga0265320_10000011 Ga0265320_1000001166 336
25 3300031250 Ga0265331_10001501 Ga0265331_100015014 336
26 3300031251 Ga0265327_10000015 Ga0265327_10000015174 336
27 3300031711 Ga0265314_10000513 Ga0265314_1000051353 336
28 3300031852 Ga0307410_10069588 Ga0307410_100695882 336
29 3300032002 Ga0307416_100015511 Ga0307416_1000155115 336
30 3300032126 Ga0307415_100144294 Ga0307415_1001442942 336
31 3300048911 Ga0496108_0000397 Ga0496108_0000397_8366_9391 336
32 3300048912 Ga0496109_0000803 Ga0496109_0000803_2380_3405 336
33 3300050507 nmdc:mga05p37_332722_c1 nmdc:mga05p37_332722_c1_672_1742 336
34 3300006038 Ga0075365_10022339 Ga0075365_100223394 337
35 3300006051 Ga0075364_10005663 Ga0075364_100056635 337
36 3300013308 Ga0157375_10063880 Ga0157375_100638803 337
37 3300046529 Ga0495652_0000010 Ga0495652_0000010_216924_218045 337
38 3300048907 Ga0496104_0000025 Ga0496104_0000025_60477_61583 337
39 3300048908 Ga0496105_0000023 Ga0496105_0000023_60477_61583 337
40 3300053077 Ga0495601_0000448 Ga0495601_0000448_11456_12517 337
41 3300005614 Ga0068856_100119403 Ga0068856_1001194032 338
42 3300026078 Ga0207702_10165142 Ga0207702_101651422 338
43 3300046455 Ga0495603_0051756 Ga0495603_0051756_155_1174 338
44 3300047317 Ga0495604_0000067 Ga0495604_0000067_58549_59586 338
45 3300048913 Ga0496110_0022820 Ga0496110_0022820_3900_4916 338
46 3300048914 Ga0496111_0089362 Ga0496111_0089362_923_1939 338
47 3300048916 Ga0496113_0157850 Ga0496113_0157850_27_1043 338
48 3300049587 Ga0501071_0162084 Ga0501071_0162084_300_1316 338
49 3300049578 Ga0501042_0012067 Ga0501042_0012067_1418_2494 339
50 3300006237 Ga0097621_100068876 Ga0097621_1000688763 340
51 3300025944 Ga0207661_10002160 Ga0207661_100021604 340
52 3300005333 Ga0070677_10000015 Ga0070677_1000001521 341
53 3300005338 Ga0068868_100000609 Ga0068868_10000060915 342
54 3300026023 Ga0207677_10000397 Ga0207677_100003972 342
55 3300046684 Ga0495669_0000076 Ga0495669_0000076_55469_56554 342
56 3300005530 Ga0070679_100004332 Ga0070679_1000043323 343
57 3300025912 Ga0207707_10044017 Ga0207707_100440172 345
58 3300025921 Ga0207652_10004118 Ga0207652_100041189 345
59 3300046615 Ga0495656_0003543 Ga0495656_0003543_1382_2419 345
60 3300048911 Ga0496108_0036840 Ga0496108_0036840_94_1149 345
61 3300048916 Ga0496113_0038596 Ga0496113_0038596_2002_3057 345
62 3300053078 Ga0495612_0003548 Ga0495612_0003548_2642_3721 345
63 3300005435 Ga0070714_100127474 Ga0070714_1001274742 346
64 3300046559 Ga0495667_0000020 Ga0495667_0000020_13111_14151 346
65 3300046663 Ga0495635_0123081 Ga0495635_0123081_600_1643 346
66 3300047322 Ga0495680_0047995 Ga0495680_0047995_704_1744 346
67 3300048918 Ga0496115_0006835 Ga0496115_0006835_4419_5459 346
68 3300044694 Ga0466963_0000004 Ga0466963_0000004_71461_72531 347
69 3300046515 Ga0495620_0011080 Ga0495620_0011080_42_1100 347
70 3300005329 Ga0070683_100355909 Ga0070683_1003559092 348
71 3300005337 Ga0070682_100000078 Ga0070682_10000007873 348
72 3300005441 Ga0070700_100061233 Ga0070700_1000612332 348
73 3300005535 Ga0070684_100007091 Ga0070684_1000070912 348
74 3300005548 Ga0070665_100000141 Ga0070665_10000014179 348
75 3300005718 Ga0068866_10000003 Ga0068866_10000003243 348
76 3300005841 Ga0068863_100000129 Ga0068863_10000012918 348
77 3300005842 Ga0068858_100000118 Ga0068858_10000011830 348
78 3300005843 Ga0068860_100005371 Ga0068860_1000053717 348
79 3300006163 Ga0070715_10000029 Ga0070715_1000002949 348
80 3300006173 Ga0070716_100029517 Ga0070716_1000295173 348
81 3300006852 Ga0075433_10047704 Ga0075433_100477043 348
82 3300009551 Ga0105238_10000009 Ga0105238_10000009237 348
83 3300013296 Ga0157374_10000268 Ga0157374_100002686 348
84 3300017792 Ga0163161_10247493 Ga0163161_102474932 348
85 3300025899 Ga0207642_10000002 Ga0207642_10000002493 348
86 3300025905 Ga0207685_10000031 Ga0207685_1000003141 348
87 3300025916 Ga0207663_10010028 Ga0207663_100100283 348
88 3300025924 Ga0207694_10000004 Ga0207694_1000000458 348
89 3300025932 Ga0207690_10014142 Ga0207690_100141422 348
90 3300025937 Ga0207669_10000001 Ga0207669_1000000149 348
91 3300025939 Ga0207665_10027650 Ga0207665_100276502 348
92 3300025944 Ga0207661_10300291 Ga0207661_103002911 348
93 3300026035 Ga0207703_10000061 Ga0207703_1000006148 348
94 3300026088 Ga0207641_10000016 Ga0207641_10000016104 348
95 3300028379 Ga0268266_10000056 Ga0268266_1000005687 348
96 3300028381 Ga0268264_10010495 Ga0268264_100104952 348
97 3300046473 Ga0495582_0000001 Ga0495582_0000001_27061_28122 348
98 3300046476 Ga0495662_0000001 Ga0495662_0000001_63181_64251 348
99 3300046535 Ga0495586_0000083 Ga0495586_0000083_39318_40385 348
100 3300046681 Ga0495647_0000001 Ga0495647_0000001_13442_14488 348
101 3300046683 Ga0495658_0000002 Ga0495658_0000002_150667_151728 348
102 3300046694 Ga0495649_0003593 Ga0495649_0003593_5688_6737 348
103 3300047321 Ga0495676_0000238 Ga0495676_0000238_34598_35647 348
104 3300048088 Ga0495602_0031656 Ga0495602_0031656_2393_3505 348
105 3300048903 Ga0496100_0000059 Ga0496100_0000059_44777_45859 348
106 3300048904 Ga0496101_0000135 Ga0496101_0000135_19660_20742 348
107 3300048909 Ga0496106_0000030 Ga0496106_0000030_45156_46205 348
108 3300048909 Ga0496106_0000772 Ga0496106_0000772_2417_3499 348
109 3300048910 Ga0496107_0000054 Ga0496107_0000054_19660_20742 348
110 3300048911 Ga0496108_0000006 Ga0496108_0000006_449136_450272 348
111 3300048912 Ga0496109_0000009 Ga0496109_0000009_216224_217360 348
112 3300048917 Ga0496114_0002880 Ga0496114_0002880_4897_5943 348
113 3300050515 nmdc:mga0a205_4244_c1 nmdc:mga0a205_4244_c1_2597_3661 348

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12982

DUF3866

Protein of unknown function (DUF3866)

28

351

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
7oa5-assembly1.cif.gz_A ruva complexed to a holliday junction. 0.6999 7 48
7oa5-assembly1.cif.gz_G ruva complexed to a holliday junction. 0.6997 7 48
7oa5-assembly1.cif.gz_C ruva complexed to a holliday junction. 0.6992 7 48
7oa5-assembly1.cif.gz_E ruva complexed to a holliday junction. 0.6989 7 48
2ztd-assembly1.cif.gz_B mtruva form iii 0.6344 1 48
ID Description Score Start End Superfamily
af_Q8MXU4_1_107_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.73 7 47 2.40.50.140
3wwvA00 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.6975 1 67 2.40.50.140
3wwvA00 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.659 1 67 2.40.50.140
3cp0A00 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.6572 5 67 2.40.50.140
2ztdA01 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.6347 1 48 2.40.50.140
ID Description Score Start End GO Terms
AF-A0A7W0S144-F1-model_v4 DUF3866 family protein 0.9514 146 344
AF-A0A3D1SXQ7-F1-model_v4 DUF3866 domain-containing protein 0.9402 117 348
AF-A0A353MK97-F1-model_v4 deleted 0.9354 120 346
AF-A0A2C6M8R2-F1-model_v4 Uncharacterized protein 0.9303 151 264
AF-A0A2N6PKM4-F1-model_v4 DUF3866 domain-containing protein 0.9276 127 345

Feature Viewer

pLDDT pTM Quality
81.97 0.8 High
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Predicted Structure (AlphaFold2)

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