F074909

General Info

Members Datasets Scaffolds Average Seq Length
113 95 109 386

Family's Representative Sequence

Representative Sequence 3300037312|Ga0395899_0010564|Ga0395899_0010564_3281_4573
Length 430
Sequence LISAILDRVRAQSAMEREQVMAAVPSSEAKAAGTWPEVLMAFLRLGLTSFGGPVAHLGYFRQDIVERRRWLDERAFVDLIALCQFLPGPASSQVGIGIGLYRAGLAGALAAWVGFTLPSALALVLFASGVEAIGGSLGSGWLHGLKIAAVAVVALAVWGMARSMANDRPRATLAVAATLLVFAVPGATGQLGAILLGAIAGMVLLRGDSDERARSPTSLGHGRALGAVCLVVFFLLLIGLPVAAAHWPRQDLAVASAFYRAGSLVFGGGHVVLPLLRAMVVPPGWVSDNLFLAGYGAAQAVPGPLFTFSAYLGFVLDRPPDGWAGAALCLCAIFLPSFLLVIGALPFWDRLRGRRGAQAALRGVNAAVVGLLLAALYDPVWKSAISTAGDFALAAVALVMLAAWKAPPWLVVIVCALGGAGLAHLQGGLP

Samples

Sample ID Description Type Environment
1 2510917020 Caulobacter sp. AP07 Isolate Rhizosphere
2 2524614857 Deinococcus ficus DSM 19119 Isolate Rhizosphere
3 2643221583 Caulobacter sp. Root655 Isolate Unclassified
4 2739367875 Deinococcus ficus CC-FR2-10 Isolate Unclassified
5 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
6 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
7 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
12 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
26 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
27 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
28 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
29 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
36 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
37 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
38 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
39 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
48 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
50 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
51 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
52 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
53 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
54 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
55 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
56 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
57 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
58 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
59 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
60 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
61 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
62 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
63 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
64 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
65 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
66 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
67 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
68 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
69 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
70 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
71 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
72 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
73 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
74 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
75 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
76 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
77 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
78 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
79 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
80 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
81 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
82 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
83 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
84 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
89 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
90 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
91 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
92 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
93 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
94 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
95 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.58
Metatranscriptomes 0.88
Isolates 3.54

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.65
Nodule 0
Rhizoplane 0
Rhizosphere 92.92
Stem 0
Stem Tuber 0
Unclassified 4.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJNas_1000161 3300000546 Bacteria 10916
2 JGI24739J22299_10016537 3300001989 Bacteria 2668
3 JGI25151J46595_10002218 3300003187 Bacteria 12001
4 Ga0070658_10105476 3300005327 Bacteria 2331
5 Ga0070691_10007420 3300005341 Bacteria 5024
6 Ga0070667_100072277 3300005367 Bacteria 2939
7 Ga0070705_100020708 3300005440 Bacteria 3486
8 Ga0068867_100088095 3300005459 Bacteria 2352
9 Ga0070698_100035953 3300005471 Bacteria 5120
10 Ga0070699_100029276 3300005518 Bacteria 4748
11 Ga0070679_100150078 3300005530 Bacteria 2308
12 Ga0068853_100035839 3300005539 Bacteria 4216
13 Ga0070695_100002317 3300005545 Bacteria 10919
14 Ga0070665_100000387 3300005548 Bacteria 64945
15 Ga0070665_100260319 3300005548 Bacteria 1736
16 Ga0068855_100000578 3300005563 Bacteria 44980
17 Ga0068857_100052133 3300005577 Bacteria 3630
18 Ga0068856_100026084 3300005614 Bacteria 5698
19 Ga0068852_100161812 3300005616 Bacteria 2090
20 Ga0068859_100161131 3300005617 Bacteria 2322
21 Ga0068858_100108667 3300005842 Bacteria 2589
22 Ga0081455_10044497 3300005937 Bacteria 3872
23 Ga0081455_10173223 3300005937 Bacteria 1641
24 Ga0081538_10000049 3300005981 Bacteria 110906
25 Ga0075428_100087922 3300006844 Bacteria 3390
26 Ga0075430_100051725 3300006846 Bacteria 3461
27 Ga0075431_100217450 3300006847 Bacteria 1950
28 Ga0075431_100368754 3300006847 Bacteria 1441
29 Ga0097620_100161148 3300006931 Bacteria 2322
30 Ga0105240_10006483 3300009093 Bacteria 17188
31 Ga0105240_10055996 3300009093 Unclassified 4935
32 Ga0105240_10297096 3300009093 Bacteria 1849
33 Ga0105245_10082492 3300009098 Bacteria 2941
34 Ga0105245_10398474 3300009098 Bacteria 1375
35 Ga0105248_10096001 3300009177 Bacteria 3338
36 Ga0105238_10151562 3300009551 Unclassified 2293
37 Ga0105238_10192679 3300009551 Bacteria 2014
38 Ga0157370_10007530 3300013104 Bacteria 11828
39 Ga0182008_10003941 3300014497 Bacteria 8786
40 Ga0213875_10001964 3300021388 Bacteria 12725
41 Ga0209025_1000136 3300025294 Bacteria 190335
42 Ga0207695_10009603 3300025913 Bacteria 11944
43 Ga0207695_10165634 3300025913 Bacteria 2139
44 Ga0207711_10132446 3300025941 Bacteria 2236
45 Ga0207689_10036189 3300025942 Bacteria 4098
46 Ga0207667_10027462 3300025949 Bacteria 6195
47 Ga0207667_10066939 3300025949 Bacteria 3743
48 Ga0207703_10006551 3300026035 Bacteria 9285
49 Ga0207702_10278016 3300026078 Bacteria 1582
50 Ga0207674_10108810 3300026116 Bacteria 2748
51 Ga0207698_10138132 3300026142 Bacteria 2094
52 Ga0207698_10222410 3300026142 Bacteria 1707
53 Ga0265354_1002363 3300028016 Bacteria 2357
54 Ga0268266_10000607 3300028379 Bacteria 48767
55 Ga0265323_10004519 3300028653 Bacteria 5994
56 Ga0265338_10114841 3300028800 Bacteria 2160
57 Ga0265760_10004043 3300031090 Bacteria 4231
58 Ga0265330_10000054 3300031235 Bacteria 101420
59 Ga0265332_10000002 3300031238 Bacteria 709510
60 Ga0265332_10001119 3300031238 Bacteria 15625
61 Ga0265328_10002779 3300031239 Bacteria 7833
62 Ga0265328_10053773 3300031239 Bacteria 1477
63 Ga0265340_10003957 3300031247 Bacteria 8332
64 Ga0265339_10007662 3300031249 Bacteria 6952
65 Ga0265339_10007924 3300031249 Bacteria 6813
66 Ga0265331_10011459 3300031250 Bacteria 4855
67 Ga0265316_10070072 3300031344 Bacteria 2705
68 Ga0265314_10000012 3300031711 Bacteria 415184
69 Ga0265314_10093903 3300031711 Bacteria 1946
70 Ga0265342_10000110 3300031712 Bacteria 91145
71 Ga0265342_10042261 3300031712 Bacteria 2755
72 Ga0307412_10042105 3300031911 Bacteria 2964
73 Ga0307416_100024623 3300032002 Bacteria 4398
74 Ga0307411_10043454 3300032005 Bacteria 2875
75 Ga0373936_0032662 3300035113 Unclassified 2059
76 Ga0373943_0064292 3300035170 Bacteria 1842
77 Ga0395899_0010564 3300037312 Bacteria 7074
78 Ga0395900_0050356 3300037418 Bacteria 4290
79 Ga0395900_0120259 3300037418 Bacteria 2695
80 Ga0436364_0441644 3300037853 Bacteria 5681
81 Ga0436361_0207229 3300039447 Bacteria 16890
82 Ga0439466_0029839 3300041411 Bacteria 1874
83 Ga0466969_0003847 3300044656 Bacteria 7971
84 Ga0466959_0006691 3300045049 Bacteria 8016
85 Ga0466959_0044874 3300045049 Bacteria 3256
86 Ga0495627_000650 3300046453 Bacteria 26905
87 Ga0495638_0021283 3300046460 Bacteria 4276
88 Ga0495584_0001800 3300046491 Bacteria 12469
89 Ga0495606_0071356 3300046507 Bacteria 2187
90 Ga0495618_0121542 3300046514 Bacteria 1673
91 Ga0495628_0022244 3300046516 Bacteria 5210
92 Ga0495645_0005860 3300046543 Bacteria 8484
93 Ga0495671_0005896 3300046692 Bacteria 7129
94 Ga0495673_0000078 3300047469 Bacteria 203066
95 Ga0495593_0060335 3300047673 Bacteria 1986
96 Ga0496126_0026255 3300048929 Bacteria 5587
97 Ga0501034_0041381 3300049571 Bacteria 4662
98 Ga0501040_0023876 3300049576 Bacteria 4100
99 Ga0501043_0032342 3300049579 Bacteria 4113
100 Ga0501047_0000825 3300049581 Bacteria 32128
101 Ga0501072_0106022 3300049588 Bacteria 2235
102 Ga0501257_000008 3300049686 Bacteria 54624
103 Ga0501083_0193869 3300049744 Bacteria 1326
104 nmdc:mga0qj67_37376_c1 3300050509 Bacteria 3803
105 nmdc:mga06r32_129471_c1 3300050510 Bacteria 2494
106 nmdc:mga06r32_424193_c1 3300050510 Bacteria 1311
107 Ga0500577_0002201 3300053142 Bacteria 4986
108 Ga0501082_0034149 3300060353 Bacteria 4388
109 Ga0530510_0073205 3300061734 Bacteria 2487

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005471 Ga0070698_100035953 Ga0070698_1000359535 291
2 3300005937 Ga0081455_10173223 Ga0081455_101732232 291
3 3300046514 Ga0495618_0121542 Ga0495618_0121542_39_1295 291
4 3300005842 Ga0068858_100108667 Ga0068858_1001086672 296
5 3300026035 Ga0207703_10006551 Ga0207703_100065512 296
6 3300005518 Ga0070699_100029276 Ga0070699_1000292762 302
7 3300025913 Ga0207695_10165634 Ga0207695_101656342 302
8 3300049686 Ga0501257_000008 Ga0501257_000008_42374_43579 304
9 3300031235 Ga0265330_10000054 Ga0265330_1000005450 305
10 3300031238 Ga0265332_10000002 Ga0265332_10000002244 305
11 3300031711 Ga0265314_10000012 Ga0265314_10000012141 305
12 3300046516 Ga0495628_0022244 Ga0495628_0022244_2616_3872 308
13 3300005937 Ga0081455_10044497 Ga0081455_100444972 310
14 3300049576 Ga0501040_0023876 Ga0501040_0023876_1617_2717 313
15 3300061734 Ga0530510_0073205 Ga0530510_0073205_706_2001 318
16 3300014497 Ga0182008_10003941 Ga0182008_100039414 319
17 3300005530 Ga0070679_100150078 Ga0070679_1001500784 320
18 3300031239 Ga0265328_10002779 Ga0265328_100027794 320
19 3300006844 Ga0075428_100087922 Ga0075428_1000879222 322
20 3300032002 Ga0307416_100024623 Ga0307416_1000246234 322
21 3300046460 Ga0495638_0021283 Ga0495638_0021283_1141_2361 322
22 3300046491 Ga0495584_0001800 Ga0495584_0001800_10460_11680 322
23 3300031249 Ga0265339_10007924 Ga0265339_100079244 323
24 3300028800 Ga0265338_10114841 Ga0265338_101148412 324
25 3300005548 Ga0070665_100000387 Ga0070665_10000038744 327
26 3300028379 Ga0268266_10000607 Ga0268266_1000060730 327
27 3300048929 Ga0496126_0026255 Ga0496126_0026255_566_1792 328
28 3300044656 Ga0466969_0003847 Ga0466969_0003847_5252_6385 329
29 3300045049 Ga0466959_0044874 Ga0466959_0044874_318_1451 329
30 3300009098 Ga0105245_10398474 Ga0105245_103984742 330
31 3300025941 Ga0207711_10132446 Ga0207711_101324463 330
32 3300005327 Ga0070658_10105476 Ga0070658_101054762 331
33 3300005548 Ga0070665_100260319 Ga0070665_1002603192 331
34 3300005614 Ga0068856_100026084 Ga0068856_1000260846 331
35 3300009093 Ga0105240_10297096 Ga0105240_102970962 331
36 3300009551 Ga0105238_10192679 Ga0105238_101926792 331
37 3300025949 Ga0207667_10066939 Ga0207667_100669394 331
38 3300026078 Ga0207702_10278016 Ga0207702_102780162 331
39 3300026142 Ga0207698_10138132 Ga0207698_101381322 331
40 3300031238 Ga0265332_10001119 Ga0265332_100011198 335
41 3300031239 Ga0265328_10053773 Ga0265328_100537732 335
42 3300031247 Ga0265340_10003957 Ga0265340_100039573 335
43 3300031249 Ga0265339_10007662 Ga0265339_100076627 335
44 3300031250 Ga0265331_10011459 Ga0265331_100114592 335
45 3300031711 Ga0265314_10093903 Ga0265314_100939031 335
46 3300031712 Ga0265342_10000110 Ga0265342_1000011062 335
47 3300032005 Ga0307411_10043454 Ga0307411_100434543 336
48 3300009093 Ga0105240_10055996 Ga0105240_100559962 337
49 3300009551 Ga0105238_10151562 Ga0105238_101515622 338
50 3300049571 Ga0501034_0041381 Ga0501034_0041381_1378_2535 339
51 3300049744 Ga0501083_0193869 Ga0501083_0193869_19_1170 339
52 3300028653 Ga0265323_10004519 Ga0265323_100045197 340
53 3300031712 Ga0265342_10042261 Ga0265342_100422611 340
54 3300003187 JGI25151J46595_10002218 JGI25151J46595_100022189 343
55 3300005367 Ga0070667_100072277 Ga0070667_1000722774 343
56 3300025294 Ga0209025_1000136 Ga0209025_1000136192 343
57 3300046507 Ga0495606_0071356 Ga0495606_0071356_631_1818 343
58 3300049579 Ga0501043_0032342 Ga0501043_0032342_1944_3299 343
59 iso_pu_bacteria 2524614857 2526062437 343
60 iso_pu_bacteria 2739367875 2740063785 343
61 3300021388 Ga0213875_10001964 Ga0213875_100019643 344
62 3300028016 Ga0265354_1002363 Ga0265354_10023632 344
63 3300031090 Ga0265760_10004043 Ga0265760_100040434 344
64 3300037853 Ga0436364_0441644 Ga0436364_0441644_1833_3035 344
65 3300001989 JGI24739J22299_10016537 JGI24739J22299_100165371 345
66 3300005539 Ga0068853_100035839 Ga0068853_1000358392 345
67 3300005577 Ga0068857_100052133 Ga0068857_1000521332 345
68 3300005616 Ga0068852_100161812 Ga0068852_1001618122 345
69 3300026116 Ga0207674_10108810 Ga0207674_101088103 345
70 3300026142 Ga0207698_10222410 Ga0207698_102224102 345
71 3300031911 Ga0307412_10042105 Ga0307412_100421052 345
72 3300049588 Ga0501072_0106022 Ga0501072_0106022_628_1776 345
73 iso_pu_bacteria 2510917020 2511120396 345
74 3300009177 Ga0105248_10096001 Ga0105248_100960014 346
75 3300031344 Ga0265316_10070072 Ga0265316_100700722 346
76 3300037418 Ga0395900_0050356 Ga0395900_0050356_1458_2696 346
77 3300053142 Ga0500577_0002201 Ga0500577_0002201_1729_2898 346
78 3300035113 Ga0373936_0032662 Ga0373936_0032662_702_1901 347
79 3300039447 Ga0436361_0207229 Ga0436361_0207229_2985_4160 347
80 3300041411 Ga0439466_0029839 Ga0439466_0029839_356_1561 347
81 3300045049 Ga0466959_0006691 Ga0466959_0006691_2641_3864 347
82 3300046453 Ga0495627_000650 Ga0495627_000650_6286_7512 347
83 3300047469 Ga0495673_0000078 Ga0495673_0000078_46577_47806 347
84 iso_pu_bacteria 2643221583 2643924804 347
85 3300005341 Ga0070691_10007420 Ga0070691_100074204 348
86 3300005440 Ga0070705_100020708 Ga0070705_1000207083 348
87 3300005459 Ga0068867_100088095 Ga0068867_1000880953 348
88 3300005545 Ga0070695_100002317 Ga0070695_1000023174 348
89 3300005563 Ga0068855_100000578 Ga0068855_10000057831 348
90 3300005617 Ga0068859_100161131 Ga0068859_1001611312 348
91 3300005981 Ga0081538_10000049 Ga0081538_1000004957 348
92 3300006846 Ga0075430_100051725 Ga0075430_1000517253 348
93 3300006847 Ga0075431_100217450 Ga0075431_1002174502 348
94 3300006847 Ga0075431_100368754 Ga0075431_1003687541 348
95 3300006931 Ga0097620_100161148 Ga0097620_1001611482 348
96 3300009093 Ga0105240_10006483 Ga0105240_100064837 348
97 3300009098 Ga0105245_10082492 Ga0105245_100824923 348
98 3300013104 Ga0157370_10007530 Ga0157370_100075308 348
99 3300025913 Ga0207695_10009603 Ga0207695_100096036 348
100 3300025942 Ga0207689_10036189 Ga0207689_100361894 348
101 3300025949 Ga0207667_10027462 Ga0207667_100274623 348
102 3300035170 Ga0373943_0064292 Ga0373943_0064292_508_1764 348
103 3300037312 Ga0395899_0010564 Ga0395899_0010564_3281_4573 348
104 3300037418 Ga0395900_0120259 Ga0395900_0120259_1102_2394 348
105 3300046692 Ga0495671_0005896 Ga0495671_0005896_2090_3370 348
106 3300047673 Ga0495593_0060335 Ga0495593_0060335_567_1793 348
107 3300050509 nmdc:mga0qj67_37376_c1 nmdc:mga0qj67_37376_c1_1670_2887 348
108 3300050510 nmdc:mga06r32_129471_c1 nmdc:mga06r32_129471_c1_709_1926 348
109 3300050510 nmdc:mga06r32_424193_c1 nmdc:mga06r32_424193_c1_60_1301 348
110 3300060353 Ga0501082_0034149 Ga0501082_0034149_43_1251 348
111 3300049581 Ga0501047_0000825 Ga0501047_0000825_451_1674 349
112 3300000546 LJNas_1000161 LJNas_10001617 351
113 3300046543 Ga0495645_0005860 Ga0495645_0005860_3057_4256 351

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02417

Chromate_transp

Chromate transporter

252

420

0.92

PF02417

Chromate_transp

Chromate transporter

36

202

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
7lhv-assembly1.cif.gz_B structure of arabidopsis thaliana sulfate transporter atsultr4;1 0.3802 17 346
7lhv-assembly1.cif.gz_B structure of arabidopsis thaliana sulfate transporter atsultr4;1 0.3621 17 346
3qe7-assembly1.cif.gz_A crystal structure of uracil transporter--uraa 0.2854 2 345
3qe7-assembly1.cif.gz_A crystal structure of uracil transporter--uraa 0.2803 2 345
5x9h-assembly1.cif.gz_A crystal structure of the mg2+ channel mgte in complex with atp 0.2731 177 313
ID Description Score Start End Superfamily
af_Q9VTL9_350_552_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3506 177 301 1.20.1250.20
af_Q54G39_363_560_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3432 177 299 1.20.1250.20
af_P76103_4_381_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.2567 2 346 1.20.1740.10
af_P76103_4_381_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.2527 2 346 1.20.1740.10
af_Q8RWF4_3_311_1.20.1280.290 Mainly Alpha;Up-down Bundle;Monooxygenase; 0.248 2 343 1.20.1280.290
ID Description Score Start End GO Terms
AF-A0A2S5LP15-F1-model_v4 Chromate transporter 0.9822 2 83 GO:0005886
GO:0015109
AF-A0A4Q3VU98-F1-model_v4 Chromate transporter 0.9703 2 85 GO:0005886
GO:0015109
AF-A0A537J2Z7-F1-model_v4 Chromate transporter 0.9672 2 82 GO:0005886
GO:0015109
AF-A0A3B9KJ06-F1-model_v4 Chromate transporter 0.9634 2 82 GO:0005886
GO:0015109
AF-A0A6J4U6F8-F1-model_v4 Chromate transport protein ChrA 0.9619 2 85 GO:0005886
GO:0015109

Feature Viewer

pLDDT pTM Quality
71.96 0.63 Medium
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Predicted Structure (AlphaFold2)

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