F072063
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 113 | 89 | 109 | 436 |
Family's Representative Sequence
| Representative Sequence | 3300005327|Ga0070658_10003285|Ga0070658_100032854 |
| Length | 472 |
| Sequence | MVRIERCTQGTAQCGCATAPANQTQQNTMSETKPVTWYDDPAHFQKTSRREFLFAGLVGGLGLTMGEYFKLRAEEAALTDGLVAKADSLIHIYLPGGAAHQEMWDPKPFAPIEYRGPLTTVDTKIPGVKFSQYMQNTAKIADKISVVRSMTHGEAAHERGTHNMFTGYRPSPAIHYPSMGSVVSHELGSRNSLPPYVCIPSVPNEFASTGYLSTSYGPFSLGGDPGNRAFKVRDLSMHDGITTERFDQRRNILSTVDEHFRTMEKSDALTAMDSFYQSAYSLVSSASAREAFNLSAEPEKIRAEYGQHDAGQRFLMARRLVEAGVRFVSVTFGGWDMHQNIARNMENQLPKFDQAYAALVTDLDRRGMLDKTLIMVSSEFGRTPKINKDAGRDHWPRVFSIAFAGGGFKRGYIHGSSDPTGAEPDTDPLTVENMAATVFNQLGINGEKKLMSPGGRPQAIVKDGTVVTDLLA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2687453257 | Planctomyces sp. SH-PL62 | Isolate | Unclassified |
| 2 | 2687453341 | Pirellula sp. SH-Sr6A | Isolate | Unclassified |
| 3 | 2836160341 | Unclassified Planctomycetes Bin 134 | Isolate | Unclassified |
| 4 | 2920107658 | Aquisphaera insulae JC669 | Isolate | Rhizosphere |
| 5 | 3300004803 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 6 | 3300005290 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) | Metagenome | Rhizosphere |
| 7 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 11 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 13 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 14 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 16 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 17 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 18 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 19 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 20 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 21 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 22 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 23 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 24 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 25 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 26 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 27 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 28 | 3300020078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 29 | 3300020610 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 30 | 3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 31 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 32 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 46 | 3300031090 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 47 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 48 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 49 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 50 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 51 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 52 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 53 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 54 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 55 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 56 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 57 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 58 | 3300032168 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 59 | 3300033524 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 60 | 3300033541 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 61 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 62 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 63 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 64 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 65 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 66 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 67 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 68 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 69 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 70 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 71 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 72 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 73 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 74 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 75 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 76 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 77 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 78 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 79 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 80 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 81 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 82 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 83 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 87 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 88 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 89 | 3300059506 | Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 52R_CW_T2_R2 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 84.07 |
| Metatranscriptomes | 12.39 |
| Isolates | 3.54 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 3.54 |
| Nodule | 0 |
| Rhizoplane | 3.54 |
| Rhizosphere | 90.27 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 2.65 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0058862_12305300 | 3300004803 | Bacteria | 1405 |
| 2 | Ga0065712_10083266 | 3300005290 | Bacteria | 2850 |
| 3 | Ga0070658_10003285 | 3300005327 | Bacteria | 13341 |
| 4 | Ga0070670_100146675 | 3300005331 | Bacteria | 2041 |
| 5 | Ga0070660_100094678 | 3300005339 | Bacteria | 2360 |
| 6 | Ga0070689_100088293 | 3300005340 | Bacteria | 2440 |
| 7 | Ga0070667_100033930 | 3300005367 | Bacteria | 4269 |
| 8 | Ga0070698_100116294 | 3300005471 | Bacteria | 2638 |
| 9 | Ga0068853_100000011 | 3300005539 | Bacteria | 246709 |
| 10 | Ga0070665_100000506 | 3300005548 | Bacteria | 55878 |
| 11 | Ga0070665_100199425 | 3300005548 | Bacteria | 2002 |
| 12 | Ga0070665_100205929 | 3300005548 | Bacteria | 1968 |
| 13 | Ga0068855_100000471 | 3300005563 | Bacteria | 49481 |
| 14 | Ga0068863_100073529 | 3300005841 | Bacteria | 3234 |
| 15 | Ga0068858_100019673 | 3300005842 | Bacteria | 6312 |
| 16 | Ga0068858_100022775 | 3300005842 | Bacteria | 5841 |
| 17 | Ga0068860_100001213 | 3300005843 | Bacteria | 28133 |
| 18 | Ga0068860_100138154 | 3300005843 | Bacteria | 2341 |
| 19 | Ga0075428_100038509 | 3300006844 | Bacteria | 5262 |
| 20 | Ga0075430_100006116 | 3300006846 | Bacteria | 10149 |
| 21 | Ga0075431_100027563 | 3300006847 | Bacteria | 5830 |
| 22 | Ga0105240_10001022 | 3300009093 | Bacteria | 49888 |
| 23 | Ga0105240_10122384 | 3300009093 | Bacteria | 3131 |
| 24 | Ga0111539_10034546 | 3300009094 | Bacteria | 6130 |
| 25 | Ga0114129_10347047 | 3300009147 | Bacteria | 1967 |
| 26 | Ga0105238_10000182 | 3300009551 | Bacteria | 68695 |
| 27 | Ga0157369_10053233 | 3300013105 | Bacteria | 4376 |
| 28 | Ga0157372_10289964 | 3300013307 | Bacteria | 1903 |
| 29 | Ga0206352_11280914 | 3300020078 | Bacteria | 2080 |
| 30 | Ga0154015_1337450 | 3300020610 | Bacteria | 1500 |
| 31 | Ga0224712_10028870 | 3300022467 | Bacteria | 1987 |
| 32 | Ga0209050_1000157 | 3300025298 | Bacteria | 157997 |
| 33 | Ga0207695_10000095 | 3300025913 | Bacteria | 265435 |
| 34 | Ga0207695_10000908 | 3300025913 | Bacteria | 53344 |
| 35 | Ga0207671_10003037 | 3300025914 | Bacteria | 17182 |
| 36 | Ga0207657_10101919 | 3300025919 | Bacteria | 2382 |
| 37 | Ga0207659_10032404 | 3300025926 | Bacteria | 3587 |
| 38 | Ga0207659_10100674 | 3300025926 | Bacteria | 2178 |
| 39 | Ga0207687_10046450 | 3300025927 | Bacteria | 3006 |
| 40 | Ga0207664_10156077 | 3300025929 | Bacteria | 1943 |
| 41 | Ga0207670_10019514 | 3300025936 | Bacteria | 4142 |
| 42 | Ga0207667_10002193 | 3300025949 | Bacteria | 24512 |
| 43 | Ga0207703_10166675 | 3300026035 | Bacteria | 1934 |
| 44 | Ga0207639_10000019 | 3300026041 | Bacteria | 246728 |
| 45 | Ga0207639_10023035 | 3300026041 | Bacteria | 4493 |
| 46 | Ga0207641_10059644 | 3300026088 | Bacteria | 3250 |
| 47 | Ga0268266_10000322 | 3300028379 | Bacteria | 75312 |
| 48 | Ga0268266_10159108 | 3300028379 | Bacteria | 2042 |
| 49 | Ga0268264_10000692 | 3300028381 | Bacteria | 39202 |
| 50 | Ga0268264_10212178 | 3300028381 | Bacteria | 1778 |
| 51 | Ga0265338_10002415 | 3300028800 | Bacteria | 28118 |
| 52 | Ga0265760_10003967 | 3300031090 | Bacteria | 4271 |
| 53 | Ga0265325_10000597 | 3300031241 | Bacteria | 26311 |
| 54 | Ga0265339_10000160 | 3300031249 | Bacteria | 56039 |
| 55 | Ga0265331_10000256 | 3300031250 | Bacteria | 61768 |
| 56 | Ga0265331_10005127 | 3300031250 | Bacteria | 7983 |
| 57 | Ga0265327_10002737 | 3300031251 | Bacteria | 17952 |
| 58 | Ga0265327_10002927 | 3300031251 | Bacteria | 17088 |
| 59 | Ga0265327_10010224 | 3300031251 | Bacteria | 6628 |
| 60 | Ga0307408_100033522 | 3300031548 | Bacteria | 3589 |
| 61 | Ga0265313_10000250 | 3300031595 | Bacteria | 58597 |
| 62 | Ga0265314_10000317 | 3300031711 | Bacteria | 67783 |
| 63 | Ga0265342_10036775 | 3300031712 | Bacteria | 2989 |
| 64 | Ga0307410_10118561 | 3300031852 | Bacteria | 1926 |
| 65 | Ga0307406_10000218 | 3300031901 | Bacteria | 34667 |
| 66 | Ga0307409_100040907 | 3300031995 | Bacteria | 3457 |
| 67 | Ga0316593_10000864 | 3300032168 | Bacteria | 6132 |
| 68 | Ga0316593_10011525 | 3300032168 | Bacteria | 2571 |
| 69 | Ga0316593_10015899 | 3300032168 | Bacteria | 2272 |
| 70 | Ga0316593_10016537 | 3300032168 | Bacteria | 2237 |
| 71 | Ga0316593_10024018 | 3300032168 | Bacteria | 1930 |
| 72 | Ga0316593_10031020 | 3300032168 | Bacteria | 1739 |
| 73 | Ga0316592_1005155 | 3300033524 | Bacteria | 2467 |
| 74 | Ga0316596_1013613 | 3300033541 | Bacteria | 2011 |
| 75 | Ga0395905_0381159 | 3300037471 | Bacteria | 1304 |
| 76 | Ga0395901_0134860 | 3300038443 | Bacteria | 2595 |
| 77 | Ga0451577_0001319 | 3300042876 | Bacteria | 33869 |
| 78 | Ga0451576_0094574 | 3300045051 | Unclassified | 3108 |
| 79 | Ga0495662_0003800 | 3300046476 | Bacteria | 7612 |
| 80 | Ga0495630_0000005 | 3300046517 | Bacteria | 406219 |
| 81 | Ga0495643_0000091 | 3300046522 | Bacteria | 152803 |
| 82 | Ga0496105_0021774 | 3300048908 | Bacteria | 5189 |
| 83 | Ga0496109_0144550 | 3300048912 | Bacteria | 2224 |
| 84 | Ga0496111_0163912 | 3300048914 | Bacteria | 1651 |
| 85 | Ga0496113_0332216 | 3300048916 | Bacteria | 1219 |
| 86 | Ga0501034_0000974 | 3300049571 | Bacteria | 41151 |
| 87 | Ga0501034_0003119 | 3300049571 | Bacteria | 19089 |
| 88 | Ga0501034_0007506 | 3300049571 | Bacteria | 11600 |
| 89 | Ga0501034_0022458 | 3300049571 | Bacteria | 6430 |
| 90 | Ga0501046_0077901 | 3300049580 | Bacteria | 2565 |
| 91 | Ga0501047_0112837 | 3300049581 | Bacteria | 2600 |
| 92 | Ga0501070_0000829 | 3300049586 | Bacteria | 28103 |
| 93 | Ga0501073_0068675 | 3300049589 | Bacteria | 2470 |
| 94 | Ga0501076_0129674 | 3300049592 | Bacteria | 2045 |
| 95 | Ga0501080_0011962 | 3300049742 | Bacteria | 7949 |
| 96 | Ga0501080_0067345 | 3300049742 | Bacteria | 3330 |
| 97 | Ga0501080_0221600 | 3300049742 | Bacteria | 1731 |
| 98 | Ga0501035_0188984 | 3300049822 | Bacteria | 1771 |
| 99 | Ga0501044_0053046 | 3300049823 | Bacteria | 4174 |
| 100 | Ga0501044_0169144 | 3300049823 | Bacteria | 2158 |
| 101 | nmdc:mga05p37_223501_c1 | 3300050507 | Bacteria | 2271 |
| 102 | nmdc:mga06r32_51482_c1 | 3300050510 | Bacteria | 3941 |
| 103 | Ga0495601_0023392 | 3300053077 | Bacteria | 3795 |
| 104 | Ga0495595_0064549 | 3300053084 | Bacteria | 1721 |
| 105 | Ga0495619_0089438 | 3300053085 | Bacteria | 2083 |
| 106 | Ga0500559_0000981 | 3300053136 | Bacteria | 17792 |
| 107 | Ga0500568_0007265 | 3300053139 | Bacteria | 5456 |
| 108 | Ga0500616_0006687 | 3300053153 | Bacteria | 7486 |
| 109 | Ga0587085_002299 | 3300059506 | Bacteria | 1927 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300037471 | Ga0395905_0381159 | Ga0395905_0381159_148_1290 | 366 |
| 2 | 3300005843 | Ga0068860_100001213 | Ga0068860_10000121321 | 375 |
| 3 | 3300028381 | Ga0268264_10000692 | Ga0268264_1000069215 | 375 |
| 4 | 3300048916 | Ga0496113_0332216 | Ga0496113_0332216_17_1156 | 379 |
| 5 | iso_pu_bacteria | 2836160341 | 2836163335 | 379 |
| 6 | 3300053139 | Ga0500568_0007265 | Ga0500568_0007265_3424_4770 | 395 |
| 7 | 3300031995 | Ga0307409_100040907 | Ga0307409_1000409072 | 396 |
| 8 | 3300042876 | Ga0451577_0001319 | Ga0451577_0001319_2976_4310 | 396 |
| 9 | 3300049589 | Ga0501073_0068675 | Ga0501073_0068675_570_1904 | 396 |
| 10 | 3300038443 | Ga0395901_0134860 | Ga0395901_0134860_44_1414 | 407 |
| 11 | 3300026035 | Ga0207703_10166675 | Ga0207703_101666751 | 416 |
| 12 | 3300005539 | Ga0068853_100000011 | Ga0068853_100000011141 | 417 |
| 13 | 3300009094 | Ga0111539_10034546 | Ga0111539_100345464 | 417 |
| 14 | 3300026041 | Ga0207639_10000019 | Ga0207639_1000001959 | 417 |
| 15 | 3300048908 | Ga0496105_0021774 | Ga0496105_0021774_32_1291 | 417 |
| 16 | 3300048912 | Ga0496109_0144550 | Ga0496109_0144550_203_1462 | 417 |
| 17 | 3300048914 | Ga0496111_0163912 | Ga0496111_0163912_302_1561 | 417 |
| 18 | 3300053084 | Ga0495595_0064549 | Ga0495595_0064549_377_1708 | 417 |
| 19 | 3300009093 | Ga0105240_10122384 | Ga0105240_101223842 | 418 |
| 20 | 3300009147 | Ga0114129_10347047 | Ga0114129_103470472 | 418 |
| 21 | 3300013105 | Ga0157369_10053233 | Ga0157369_100532333 | 418 |
| 22 | 3300013307 | Ga0157372_10289964 | Ga0157372_102899642 | 418 |
| 23 | 3300032168 | Ga0316593_10024018 | Ga0316593_100240181 | 418 |
| 24 | 3300049571 | Ga0501034_0000974 | Ga0501034_0000974_31694_32995 | 418 |
| 25 | 3300050507 | nmdc:mga05p37_223501_c1 | nmdc:mga05p37_223501_c1_65_1345 | 418 |
| 26 | iso_pu_bacteria | 2687453341 | 2688394002 | 418 |
| 27 | 3300005290 | Ga0065712_10083266 | Ga0065712_100832663 | 419 |
| 28 | 3300005340 | Ga0070689_100088293 | Ga0070689_1000882933 | 419 |
| 29 | 3300005471 | Ga0070698_100116294 | Ga0070698_1001162942 | 419 |
| 30 | 3300005548 | Ga0070665_100000506 | Ga0070665_10000050640 | 419 |
| 31 | 3300025927 | Ga0207687_10046450 | Ga0207687_100464506 | 419 |
| 32 | 3300025936 | Ga0207670_10019514 | Ga0207670_100195142 | 419 |
| 33 | 3300028379 | Ga0268266_10000322 | Ga0268266_1000032213 | 419 |
| 34 | 3300031090 | Ga0265760_10003967 | Ga0265760_100039672 | 419 |
| 35 | 3300031250 | Ga0265331_10005127 | Ga0265331_100051273 | 419 |
| 36 | 3300031251 | Ga0265327_10002737 | Ga0265327_100027375 | 419 |
| 37 | 3300031251 | Ga0265327_10010224 | Ga0265327_100102241 | 419 |
| 38 | 3300031548 | Ga0307408_100033522 | Ga0307408_1000335222 | 419 |
| 39 | 3300031852 | Ga0307410_10118561 | Ga0307410_101185612 | 419 |
| 40 | 3300031901 | Ga0307406_10000218 | Ga0307406_1000021810 | 419 |
| 41 | 3300032168 | Ga0316593_10000864 | Ga0316593_100008641 | 419 |
| 42 | 3300032168 | Ga0316593_10011525 | Ga0316593_100115252 | 419 |
| 43 | 3300032168 | Ga0316593_10015899 | Ga0316593_100158991 | 419 |
| 44 | 3300032168 | Ga0316593_10016537 | Ga0316593_100165371 | 419 |
| 45 | 3300032168 | Ga0316593_10031020 | Ga0316593_100310201 | 419 |
| 46 | 3300033524 | Ga0316592_1005155 | Ga0316592_10051552 | 419 |
| 47 | 3300033541 | Ga0316596_1013613 | Ga0316596_10136131 | 419 |
| 48 | 3300049571 | Ga0501034_0003119 | Ga0501034_0003119_8499_9803 | 419 |
| 49 | 3300049571 | Ga0501034_0007506 | Ga0501034_0007506_1285_2589 | 419 |
| 50 | 3300049580 | Ga0501046_0077901 | Ga0501046_0077901_454_1755 | 419 |
| 51 | 3300049581 | Ga0501047_0112837 | Ga0501047_0112837_861_2162 | 419 |
| 52 | 3300049586 | Ga0501070_0000829 | Ga0501070_0000829_13333_14634 | 419 |
| 53 | 3300049742 | Ga0501080_0011962 | Ga0501080_0011962_4154_5467 | 419 |
| 54 | 3300049742 | Ga0501080_0067345 | Ga0501080_0067345_1756_3105 | 419 |
| 55 | 3300049822 | Ga0501035_0188984 | Ga0501035_0188984_346_1674 | 419 |
| 56 | 3300049823 | Ga0501044_0053046 | Ga0501044_0053046_2377_3705 | 419 |
| 57 | 3300049823 | Ga0501044_0169144 | Ga0501044_0169144_83_1387 | 419 |
| 58 | 3300053077 | Ga0495601_0023392 | Ga0495601_0023392_166_1488 | 419 |
| 59 | 3300053085 | Ga0495619_0089438 | Ga0495619_0089438_657_1979 | 419 |
| 60 | 3300053136 | Ga0500559_0000981 | Ga0500559_0000981_8769_10100 | 419 |
| 61 | 3300059506 | Ga0587085_002299 | Ga0587085_002299_258_1562 | 419 |
| 62 | iso_pu_bacteria | 2687453257 | 2688069233 | 419 |
| 63 | iso_pu_bacteria | 2920107658 | 2920107726 | 419 |
| 64 | 3300004803 | Ga0058862_12305300 | Ga0058862_123053001 | 420 |
| 65 | 3300005327 | Ga0070658_10003285 | Ga0070658_100032854 | 420 |
| 66 | 3300005331 | Ga0070670_100146675 | Ga0070670_1001466751 | 420 |
| 67 | 3300005339 | Ga0070660_100094678 | Ga0070660_1000946782 | 420 |
| 68 | 3300005367 | Ga0070667_100033930 | Ga0070667_1000339302 | 420 |
| 69 | 3300005548 | Ga0070665_100199425 | Ga0070665_1001994252 | 420 |
| 70 | 3300005548 | Ga0070665_100205929 | Ga0070665_1002059291 | 420 |
| 71 | 3300005563 | Ga0068855_100000471 | Ga0068855_10000047137 | 420 |
| 72 | 3300005841 | Ga0068863_100073529 | Ga0068863_1000735294 | 420 |
| 73 | 3300005842 | Ga0068858_100019673 | Ga0068858_1000196734 | 420 |
| 74 | 3300005842 | Ga0068858_100022775 | Ga0068858_1000227752 | 420 |
| 75 | 3300005843 | Ga0068860_100138154 | Ga0068860_1001381542 | 420 |
| 76 | 3300006844 | Ga0075428_100038509 | Ga0075428_1000385094 | 420 |
| 77 | 3300006846 | Ga0075430_100006116 | Ga0075430_1000061164 | 420 |
| 78 | 3300006847 | Ga0075431_100027563 | Ga0075431_1000275632 | 420 |
| 79 | 3300009093 | Ga0105240_10001022 | Ga0105240_1000102227 | 420 |
| 80 | 3300009551 | Ga0105238_10000182 | Ga0105238_1000018231 | 420 |
| 81 | 3300020078 | Ga0206352_11280914 | Ga0206352_112809141 | 420 |
| 82 | 3300020610 | Ga0154015_1337450 | Ga0154015_13374501 | 420 |
| 83 | 3300022467 | Ga0224712_10028870 | Ga0224712_100288701 | 420 |
| 84 | 3300025298 | Ga0209050_1000157 | Ga0209050_10001579 | 420 |
| 85 | 3300025913 | Ga0207695_10000095 | Ga0207695_1000009519 | 420 |
| 86 | 3300025913 | Ga0207695_10000908 | Ga0207695_100009089 | 420 |
| 87 | 3300025914 | Ga0207671_10003037 | Ga0207671_100030376 | 420 |
| 88 | 3300025919 | Ga0207657_10101919 | Ga0207657_101019192 | 420 |
| 89 | 3300025926 | Ga0207659_10032404 | Ga0207659_100324042 | 420 |
| 90 | 3300025926 | Ga0207659_10100674 | Ga0207659_101006741 | 420 |
| 91 | 3300025929 | Ga0207664_10156077 | Ga0207664_101560771 | 420 |
| 92 | 3300025949 | Ga0207667_10002193 | Ga0207667_100021934 | 420 |
| 93 | 3300026041 | Ga0207639_10023035 | Ga0207639_100230352 | 420 |
| 94 | 3300026088 | Ga0207641_10059644 | Ga0207641_100596442 | 420 |
| 95 | 3300028379 | Ga0268266_10159108 | Ga0268266_101591081 | 420 |
| 96 | 3300028381 | Ga0268264_10212178 | Ga0268264_102121782 | 420 |
| 97 | 3300028800 | Ga0265338_10002415 | Ga0265338_100024152 | 420 |
| 98 | 3300031241 | Ga0265325_10000597 | Ga0265325_100005975 | 420 |
| 99 | 3300031249 | Ga0265339_10000160 | Ga0265339_1000016043 | 420 |
| 100 | 3300031250 | Ga0265331_10000256 | Ga0265331_100002564 | 420 |
| 101 | 3300031251 | Ga0265327_10002927 | Ga0265327_100029272 | 420 |
| 102 | 3300031595 | Ga0265313_10000250 | Ga0265313_1000025043 | 420 |
| 103 | 3300031711 | Ga0265314_10000317 | Ga0265314_100003174 | 420 |
| 104 | 3300031712 | Ga0265342_10036775 | Ga0265342_100367752 | 420 |
| 105 | 3300045051 | Ga0451576_0094574 | Ga0451576_0094574_235_1581 | 420 |
| 106 | 3300046476 | Ga0495662_0003800 | Ga0495662_0003800_5086_6390 | 420 |
| 107 | 3300046517 | Ga0495630_0000005 | Ga0495630_0000005_372283_373587 | 420 |
| 108 | 3300046522 | Ga0495643_0000091 | Ga0495643_0000091_117646_119031 | 420 |
| 109 | 3300049571 | Ga0501034_0022458 | Ga0501034_0022458_2895_4190 | 420 |
| 110 | 3300049592 | Ga0501076_0129674 | Ga0501076_0129674_582_1892 | 420 |
| 111 | 3300049742 | Ga0501080_0221600 | Ga0501080_0221600_240_1550 | 420 |
| 112 | 3300050510 | nmdc:mga06r32_51482_c1 | nmdc:mga06r32_51482_c1_1390_2724 | 420 |
| 113 | 3300053153 | Ga0500616_0006687 | Ga0500616_0006687_2004_3344 | 420 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 7p4j-assembly1.cif.gz_A | crystal structure of autotaxin and tetrahydrocannabinol | 0.7628 | 258 | 330 |
| 6wfj-assembly2.cif.gz_BcB | crystal structures of human e-npp 1: apo | 0.7608 | 261 | 330 |
| 6weu-assembly1.cif.gz_AbA | crystal structures of human e-npp 1: bound to adenosine-5'-thio-monophosphate | 0.7525 | 261 | 330 |
| 4gtz-assembly2.cif.gz_B | crystal structure of mouse enpp1 in complex with cmp | 0.7502 | 261 | 330 |
| 5ijs-assembly1.cif.gz_A | crystal structure of autotaxin with orthovanadate bound as a trigonal bipyramidal intermediate analog | 0.7501 | 258 | 330 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q8N4W6_269_337_1.10.287.110 | Mainly Alpha;Orthogonal Bundle;Helix Hairpins;DnaJ domain | 0.753 | 182 | 233 | 1.10.287.110 |
| af_Q4D8K5_228_300_1.10.287.110 | Mainly Alpha;Orthogonal Bundle;Helix Hairpins;DnaJ domain | 0.7215 | 182 | 244 | 1.10.287.110 |
| 5eghA01 | Alpha Beta;3-Layer(aba) Sandwich;Alkaline Phosphatase, subunit A;Alkaline Phosphatase, subunit A | 0.7004 | 261 | 393 | 3.40.720.10 |
| af_Q4D8K5_228_300_1.10.287.110 | Mainly Alpha;Orthogonal Bundle;Helix Hairpins;DnaJ domain | 0.6195 | 182 | 244 | 1.10.287.110 |
| af_Q9VVM1_35_379_3.40.720.10 | Alpha Beta;3-Layer(aba) Sandwich;Alkaline Phosphatase, subunit A;Alkaline Phosphatase, subunit A | 0.6131 | 254 | 393 | 3.40.720.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A3C0WGX7-F1-model_v4 | DUF1501 domain-containing protein | 0.9714 | 240 | 420 |
|
| AF-A0A2E7NR52-F1-model_v4 | deleted | 0.9699 | 245 | 420 |
|
| AF-A0A257TD62-F1-model_v4 | DUF1501 domain-containing protein | 0.9657 | 242 | 419 |
|
| AF-A0A3D1DIZ4-F1-model_v4 | DUF1501 domain-containing protein | 0.9633 | 283 | 420 |
|
| AF-A0A352E091-F1-model_v4 | DUF1501 domain-containing protein | 0.9605 | 233 | 420 |
|
Predicted Structure (AlphaFold2)
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