F058489
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 110 | 80 | 220 | 482 |
Family's Representative Sequence
| Representative Sequence | 3300006038|Ga0075365_10123218|Ga0075365_101232181 |
| Length | 504 |
| Sequence | MKILFATPECAPYVKTGGLGDVSAALPATLAALGHDVRVLMPAYKGMKVSGEIGDGVDLPPWGPWPAAQLLPVKVANGVTMLLLACPSLYQRPGGPYVDASGHDYHDNALRFGLLARVAAQIGTAHSPVRGWSADVVHANDWPCGMAPLYLAQSRMVAPLEPTAASVITIHNLAFQGVFPMASADLLDVPHQWRGMDGVEFWGELSMLKAGLQFADAITAVSPSYAREIQTPAHGVGFDGILRQRAARLRGILNGIDTQVWSPQADPHLPFHFGPDDLQGKAQCKAALQARLGLPAESSAMLFAVVSRLTPQKGIDLVLGALPRLLAAGAQLVVLGQGEPGLQQALKDAARKHPRQIAVNLGFDEGLAHLIEAGADVFLMPSRFEPCGLNQMYSQAYGTPPIVAPVGGLLDSVTDASADPQHGTGFVMTGVDPVGLEDAIARASRLWREPQRWRRVQANGMARHFGWEDSAGQYLEVYARAIARMPLASEPGEPRLHAPRPSRP |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 2 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 3 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 4 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 5 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 6 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 7 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 8 | 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 10 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 11 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 13 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 14 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 15 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 16 | 3300028556 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG | Metagenome | Rhizosphere |
| 17 | 3300028563 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG | Metagenome | Rhizosphere |
| 18 | 3300028577 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG | Metagenome | Rhizosphere |
| 19 | 3300028653 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG | Metagenome | Rhizosphere |
| 20 | 3300028654 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG | Metagenome | Rhizosphere |
| 21 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 22 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 23 | 3300031235 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG | Metagenome | Rhizosphere |
| 24 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 25 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 26 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 27 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 28 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 29 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 30 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 31 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 32 | 3300031665 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 | Metagenome | Rhizosphere |
| 33 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 34 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 35 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 36 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 37 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 38 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 39 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 40 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 41 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 42 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 43 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 44 | 3300042007 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 | Metagenome | Rhizosphere |
| 45 | 3300042157 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 | Metagenome | Rhizosphere |
| 46 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 47 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 48 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 49 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 50 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 51 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 52 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 53 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 54 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 55 | 3300046528 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere | Metagenome | Rhizosphere |
| 56 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 57 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 58 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 59 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 60 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 61 | 3300049675 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control | Metagenome | Rhizosphere |
| 62 | 3300049763 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control | Metagenome | Rhizosphere |
| 63 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 64 | 2540341094 | Bacillus subtilis XF-1 | Isolate | Rhizosphere |
| 65 | 2643221609 | Acidovorax sp. Root217 | Isolate | Unclassified |
| 66 | 2643221611 | Acidovorax sp. Root219 | Isolate | Unclassified |
| 67 | 2738543012 | Acidovorax sp. CF301 | Isolate | Unclassified |
| 68 | 2786546940 | Opitutaceae bacterium EW11 | Isolate | Unclassified |
| 69 | 2808606399 | Bacillus sp. SJZ110 | Isolate | Rhizosphere |
| 70 | 2816332133 | Acidovorax radicis 2721A | Isolate | Unclassified |
| 71 | 2842718218 | Acidovorax sp. R-73343 | Isolate | Unclassified |
| 72 | 2860837431 | Bacillus sp. WR11 | Isolate | Unclassified |
| 73 | 2962290636 | Bacillus subtilis TLO3 | Isolate | Rhizosphere |
| 74 | 2969136845 | Bacillus subtilis TLO3 | Isolate | Rhizosphere |
| 75 | 2969765954 | Bacillus intestinalis GM2 | Isolate | Rhizosphere |
| 76 | 2969770375 | Bacillus subtilis GM5 | Isolate | Rhizosphere |
| 77 | 2974320154 | Acidovorax wautersii SORGH_AS 335 | Isolate | Unclassified |
| 78 | 2980492589 | Bacillus subtilis GQJK2 | Isolate | Rhizosphere |
| 79 | 3006879489 | Bacillus atrophaeus UCMB-5137 | Isolate | Rhizosphere |
| 80 | 8022653035 | Bacillus sp. Rc4 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 83.64 |
| Metatranscriptomes | 0 |
| Isolates | 16.36 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 6.36 |
| Nodule | 0 |
| Rhizoplane | 0 |
| Rhizosphere | 80 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0.91 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0075365_10123218 | 3300006038 | Bacteria | 1790 |
| 2 | rootH2_10008616 | 3300003320 | Bacteria | 34848 |
| 3 | rootL2_10011319 | 3300003322 | Bacteria | 3311 |
| 4 | rootL2_10259898 | 3300003322 | Bacteria | 2240 |
| 5 | Ga0055531_10001259 | 3300003794 | Bacteria | 19156 |
| 6 | Ga0070683_100002725 | 3300005329 | Bacteria | 14109 |
| 7 | Ga0070683_100015423 | 3300005329 | Bacteria | 6711 |
| 8 | Ga0070713_100005859 | 3300005436 | Bacteria | 8443 |
| 9 | Ga0070684_100091514 | 3300005535 | Bacteria | 2706 |
| 10 | Ga0070693_100083742 | 3300005547 | Bacteria | 1907 |
| 11 | Ga0068857_100023036 | 3300005577 | Bacteria | 5478 |
| 12 | Ga0068856_100086804 | 3300005614 | Bacteria | 3109 |
| 13 | Ga0070717_10000060 | 3300006028 | Bacteria | 92521 |
| 14 | Ga0209673_1017033 | 3300025273 | Bacteria | 2692 |
| 15 | Ga0209051_1000254 | 3300025303 | Bacteria | 90411 |
| 16 | Ga0209257_1000012 | 3300025304 | Bacteria | 1111138 |
| 17 | Ga0209257_1000045 | 3300025304 | Bacteria | 484429 |
| 18 | Ga0209257_1000137 | 3300025304 | Bacteria | 204210 |
| 19 | Ga0207700_10004350 | 3300025928 | Bacteria | 8337 |
| 20 | Ga0265337_1011016 | 3300028556 | Bacteria | 3135 |
| 21 | Ga0265319_1000031 | 3300028563 | Bacteria | 124456 |
| 22 | Ga0265318_10002069 | 3300028577 | Bacteria | 10993 |
| 23 | Ga0265318_10029329 | 3300028577 | Bacteria | 2146 |
| 24 | Ga0265323_10000015 | 3300028653 | Bacteria | 105428 |
| 25 | Ga0265323_10001882 | 3300028653 | Bacteria | 9902 |
| 26 | Ga0265323_10008841 | 3300028653 | Bacteria | 4140 |
| 27 | Ga0265323_10014914 | 3300028653 | Bacteria | 3065 |
| 28 | Ga0265322_10000927 | 3300028654 | Bacteria | 10272 |
| 29 | Ga0265322_10001206 | 3300028654 | Bacteria | 8819 |
| 30 | Ga0307515_10175012 | 3300028794 | Unclassified | 2121 |
| 31 | Ga0265338_10000329 | 3300028800 | Bacteria | 86337 |
| 32 | Ga0265338_10015910 | 3300028800 | Bacteria | 8229 |
| 33 | Ga0265330_10018336 | 3300031235 | Bacteria | 3214 |
| 34 | Ga0265332_10043792 | 3300031238 | Bacteria | 1932 |
| 35 | Ga0265320_10011728 | 3300031240 | Bacteria | 5141 |
| 36 | Ga0265320_10019597 | 3300031240 | Bacteria | 3693 |
| 37 | Ga0265320_10031675 | 3300031240 | Bacteria | 2714 |
| 38 | Ga0265339_10009864 | 3300031249 | Bacteria | 5965 |
| 39 | Ga0265327_10002958 | 3300031251 | Bacteria | 16975 |
| 40 | Ga0265327_10004561 | 3300031251 | Bacteria | 12204 |
| 41 | Ga0265316_10006493 | 3300031344 | Bacteria | 11164 |
| 42 | Ga0265316_10024581 | 3300031344 | Bacteria | 5042 |
| 43 | Ga0307408_100066293 | 3300031548 | Bacteria | 2651 |
| 44 | Ga0265313_10000533 | 3300031595 | Bacteria | 39787 |
| 45 | Ga0265313_10022455 | 3300031595 | Bacteria | 3422 |
| 46 | Ga0307508_10001746 | 3300031616 | Bacteria | 24119 |
| 47 | Ga0316575_10011683 | 3300031665 | Bacteria | 3254 |
| 48 | Ga0265314_10008022 | 3300031711 | Bacteria | 9103 |
| 49 | Ga0265342_10015822 | 3300031712 | Bacteria | 4951 |
| 50 | Ga0265342_10021820 | 3300031712 | Bacteria | 4082 |
| 51 | Ga0265342_10060754 | 3300031712 | Bacteria | 2227 |
| 52 | Ga0316578_10017104 | 3300031728 | Bacteria | 3941 |
| 53 | Ga0307416_100113092 | 3300032002 | Bacteria | 2398 |
| 54 | Ga0316574_0001370 | 3300035398 | Bacteria | 11480 |
| 55 | Ga0373933_0025295 | 3300035724 | Bacteria | 3404 |
| 56 | Ga0316584_0008250 | 3300036712 | Bacteria | 7171 |
| 57 | Ga0395900_0066691 | 3300037418 | Bacteria | 3698 |
| 58 | Ga0395900_0281612 | 3300037418 | Bacteria | 1654 |
| 59 | Ga0395898_0003968 | 3300037466 | Bacteria | 16291 |
| 60 | Ga0395898_0009334 | 3300037466 | Bacteria | 10309 |
| 61 | Ga0395905_0009822 | 3300037471 | Bacteria | 9327 |
| 62 | Ga0395905_0041095 | 3300037471 | Bacteria | 4339 |
| 63 | Ga0395905_0045469 | 3300037471 | Bacteria | 4117 |
| 64 | Ga0395905_0055485 | 3300037471 | Bacteria | 3707 |
| 65 | Ga0395905_0078391 | 3300037471 | Bacteria | 3096 |
| 66 | Ga0395901_0014505 | 3300038443 | Bacteria | 8013 |
| 67 | Ga0439449_0000288 | 3300042007 | Bacteria | 18174 |
| 68 | Ga0439458_0010506 | 3300042157 | Bacteria | 2066 |
| 69 | Ga0451577_0193373 | 3300042876 | Bacteria | 1835 |
| 70 | Ga0466969_0004756 | 3300044656 | Bacteria | 7224 |
| 71 | Ga0453683_0000982 | 3300044673 | Bacteria | 26920 |
| 72 | Ga0453683_0077659 | 3300044673 | Bacteria | 2079 |
| 73 | Ga0466966_0006069 | 3300044684 | Bacteria | 7978 |
| 74 | Ga0466961_0016907 | 3300044693 | Bacteria | 4687 |
| 75 | Ga0453684_0112294 | 3300044712 | Bacteria | 3308 |
| 76 | Ga0466957_0070574 | 3300044842 | Bacteria | 2159 |
| 77 | Ga0466959_0043404 | 3300045049 | Bacteria | 3314 |
| 78 | Ga0451576_0000087 | 3300045051 | Bacteria | 234554 |
| 79 | Ga0451576_0006613 | 3300045051 | Bacteria | 14171 |
| 80 | Ga0451576_0263277 | 3300045051 | Bacteria | 1802 |
| 81 | Ga0495642_0014885 | 3300046528 | Bacteria | 3019 |
| 82 | Ga0501032_0003314 | 3300049569 | Bacteria | 12387 |
| 83 | Ga0501034_0021634 | 3300049571 | Bacteria | 6551 |
| 84 | Ga0501034_0052935 | 3300049571 | Bacteria | 4089 |
| 85 | Ga0501036_0169585 | 3300049572 | Bacteria | 1839 |
| 86 | Ga0501046_0042690 | 3300049580 | Bacteria | 3614 |
| 87 | Ga0501047_0006142 | 3300049581 | Bacteria | 11289 |
| 88 | Ga0501047_0017351 | 3300049581 | Bacteria | 6894 |
| 89 | Ga0501047_0133011 | 3300049581 | Bacteria | 2367 |
| 90 | Ga0501243_000238 | 3300049675 | Bacteria | 6899 |
| 91 | Ga0501266_000058 | 3300049763 | Bacteria | 17471 |
| 92 | Ga0501044_0000220 | 3300049823 | Bacteria | 72153 |
| 93 | 2540607975 | 2540341094 | Bacteria | 4061186 |
| 94 | 2644062333 | 2643221609 | Bacteria | 6756331 |
| 95 | 2644073745 | 2643221611 | Bacteria | 6820941 |
| 96 | 2739243074 | 2738543012 | Bacteria | 7115078 |
| 97 | 2788434765 | 2786546940 | Bacteria | 6396474 |
| 98 | 2809056345 | 2808606399 | Bacteria | 4021018 |
| 99 | 2816473234 | 2816332133 | Bacteria | 7249298 |
| 100 | 2816474336 | 2816332133 | Bacteria | 7249298 |
| 101 | 2842719418 | 2842718218 | Bacteria | 4560148 |
| 102 | 2860840759 | 2860837431 | Bacteria | 4202080 |
| 103 | 2962293980 | 2962290636 | Bacteria | 4072939 |
| 104 | 2969139965 | 2969136845 | Bacteria | 3923176 |
| 105 | 2969769567 | 2969765954 | Bacteria | 4216713 |
| 106 | 2969772631 | 2969770375 | Bacteria | 4271280 |
| 107 | 2974323507 | 2974320154 | Bacteria | 4571377 |
| 108 | 2980495753 | 2980492589 | Bacteria | 4072961 |
| 109 | 3006882064 | 3006879489 | Bacteria | 4064221 |
| 110 | 8022654919 | 8022653035 | Bacteria | 4035078 |
| 111 | Ga0075365_10123218 | |||
| 112 | rootH2_10008616 | |||
| 113 | rootL2_10011319 | |||
| 114 | rootL2_10259898 | |||
| 115 | Ga0055531_10001259 | |||
| 116 | Ga0070683_100002725 | |||
| 117 | Ga0070683_100015423 | |||
| 118 | Ga0070713_100005859 | |||
| 119 | Ga0070684_100091514 | |||
| 120 | Ga0070693_100083742 | |||
| 121 | Ga0068857_100023036 | |||
| 122 | Ga0068856_100086804 | |||
| 123 | Ga0070717_10000060 | |||
| 124 | Ga0209673_1017033 | |||
| 125 | Ga0209051_1000254 | |||
| 126 | Ga0209257_1000012 | |||
| 127 | Ga0209257_1000045 | |||
| 128 | Ga0209257_1000137 | |||
| 129 | Ga0207700_10004350 | |||
| 130 | Ga0265337_1011016 | |||
| 131 | Ga0265319_1000031 | |||
| 132 | Ga0265318_10002069 | |||
| 133 | Ga0265318_10029329 | |||
| 134 | Ga0265323_10000015 | |||
| 135 | Ga0265323_10001882 | |||
| 136 | Ga0265323_10008841 | |||
| 137 | Ga0265323_10014914 | |||
| 138 | Ga0265322_10000927 | |||
| 139 | Ga0265322_10001206 | |||
| 140 | Ga0307515_10175012 | |||
| 141 | Ga0265338_10000329 | |||
| 142 | Ga0265338_10015910 | |||
| 143 | Ga0265330_10018336 | |||
| 144 | Ga0265332_10043792 | |||
| 145 | Ga0265320_10011728 | |||
| 146 | Ga0265320_10019597 | |||
| 147 | Ga0265320_10031675 | |||
| 148 | Ga0265339_10009864 | |||
| 149 | Ga0265327_10002958 | |||
| 150 | Ga0265327_10004561 | |||
| 151 | Ga0265316_10006493 | |||
| 152 | Ga0265316_10024581 | |||
| 153 | Ga0307408_100066293 | |||
| 154 | Ga0265313_10000533 | |||
| 155 | Ga0265313_10022455 | |||
| 156 | Ga0307508_10001746 | |||
| 157 | Ga0316575_10011683 | |||
| 158 | Ga0265314_10008022 | |||
| 159 | Ga0265342_10015822 | |||
| 160 | Ga0265342_10021820 | |||
| 161 | Ga0265342_10060754 | |||
| 162 | Ga0316578_10017104 | |||
| 163 | Ga0307416_100113092 | |||
| 164 | Ga0316574_0001370 | |||
| 165 | Ga0373933_0025295 | |||
| 166 | Ga0316584_0008250 | |||
| 167 | Ga0395900_0066691 | |||
| 168 | Ga0395900_0281612 | |||
| 169 | Ga0395898_0003968 | |||
| 170 | Ga0395898_0009334 | |||
| 171 | Ga0395905_0009822 | |||
| 172 | Ga0395905_0041095 | |||
| 173 | Ga0395905_0045469 | |||
| 174 | Ga0395905_0055485 | |||
| 175 | Ga0395905_0078391 | |||
| 176 | Ga0395901_0014505 | |||
| 177 | Ga0439449_0000288 | |||
| 178 | Ga0439458_0010506 | |||
| 179 | Ga0451577_0193373 | |||
| 180 | Ga0466969_0004756 | |||
| 181 | Ga0453683_0000982 | |||
| 182 | Ga0453683_0077659 | |||
| 183 | Ga0466966_0006069 | |||
| 184 | Ga0466961_0016907 | |||
| 185 | Ga0453684_0112294 | |||
| 186 | Ga0466957_0070574 | |||
| 187 | Ga0466959_0043404 | |||
| 188 | Ga0451576_0000087 | |||
| 189 | Ga0451576_0006613 | |||
| 190 | Ga0451576_0263277 | |||
| 191 | Ga0495642_0014885 | |||
| 192 | Ga0501032_0003314 | |||
| 193 | Ga0501034_0021634 | |||
| 194 | Ga0501034_0052935 | |||
| 195 | Ga0501036_0169585 | |||
| 196 | Ga0501046_0042690 | |||
| 197 | Ga0501047_0006142 | |||
| 198 | Ga0501047_0017351 | |||
| 199 | Ga0501047_0133011 | |||
| 200 | Ga0501243_000238 | |||
| 201 | Ga0501266_000058 | |||
| 202 | Ga0501044_0000220 | |||
| 203 | 2540607975 | |||
| 204 | 2644062333 | |||
| 205 | 2644073745 | |||
| 206 | 2739243074 | |||
| 207 | 2788434765 | |||
| 208 | 2809056345 | |||
| 209 | 2816473234 | |||
| 210 | 2816474336 | |||
| 211 | 2842719418 | |||
| 212 | 2860840759 | |||
| 213 | 2962293980 | |||
| 214 | 2969139965 | |||
| 215 | 2969769567 | |||
| 216 | 2969772631 | |||
| 217 | 2974323507 | |||
| 218 | 2980495753 | |||
| 219 | 3006882064 | |||
| 220 | 8022654919 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3cx4-assembly1.cif.gz_A | crystal structure of e.coli gs mutant e377a in complex with adp and oligosaccharides | 0.9408 | 1 | 478 |
| 3cx4-assembly1.cif.gz_A | crystal structure of e.coli gs mutant e377a in complex with adp and oligosaccharides | 0.9369 | 1 | 478 |
| 2r4t-assembly1.cif.gz_A | crystal structure of wild-type e.coli gs in complex with adp and glucose(wtgsc) | 0.9354 | 1 | 480 |
| 2r4t-assembly1.cif.gz_A | crystal structure of wild-type e.coli gs in complex with adp and glucose(wtgsc) | 0.9335 | 1 | 480 |
| 6gne-assembly1.cif.gz_A | catalytic domain of starch synthase iv from arabidopsis thaliana bound to adp and acarbose | 0.9204 | 3 | 479 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3copA02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; | 0.9638 | 256 | 461 | 3.40.50.2000 |
| af_Q0DEC8_405_613_3.40.50.2000 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; | 0.9583 | 256 | 459 | 3.40.50.2000 |
| 3copA02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; | 0.9415 | 256 | 461 | 3.40.50.2000 |
| af_Q59001_288_450_3.40.50.2000 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; | 0.9378 | 292 | 443 | 3.40.50.2000 |
| 1rzvB02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; | 0.9356 | 256 | 461 | 3.40.50.2000 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7W0J5G2-F1-model_v4 | starch synthase (EC 2.4.1.21) | 0.9712 | 52 | 479 |
GO:0004373
GO:0005978 GO:0009011 |
| AF-A0A7C6T2F9-F1-model_v4 | Glycosyltransferase | 0.9692 | 300 | 478 |
GO:0016757
|
| AF-Q093U1-F1-model_v4 | starch synthase (EC 2.4.1.21) | 0.9679 | 188 | 478 |
GO:0004373
GO:0005978 GO:0009011 |
| AF-A0A7W1DR79-F1-model_v4 | starch synthase (EC 2.4.1.21) | 0.9673 | 64 | 480 |
GO:0004373
GO:0005978 GO:0009011 |
| AF-A0A7X8EBL3-F1-model_v4 | Glycosyltransferase | 0.9656 | 299 | 479 |
GO:0016757
|