F056031

General Info

Members Datasets Scaffolds Average Seq Length
109 83 75 159

Family's Representative Sequence

Representative Sequence 3300048928|Ga0496125_0012431|Ga0496125_0012431_2074_2598
Length 174
Sequence MLRHPPLFVTGRRTMESWNARVAAVWDDDTLSDAERIDRIDALAGERAEGDARALFERAGARDSAGEEAEAEVLYRRALDAGLDDEHRPQAVIQLASTLRNLGEVDEALGLLRAERERGGPLTDAASAFYALALVTHGESREAAAIALEALAPHLPRYTRSVTAYARELVDPPR

Samples

Sample ID Description Type Environment
1 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
2 2643221546 Microbacterium sp. Root53 Isolate Unclassified
3 2643221553 Microbacterium sp. Root553 Isolate Unclassified
4 2643221630 Microbacterium sp. Root322 Isolate Unclassified
5 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
6 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
7 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
8 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
9 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
10 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
11 2808606372 Agromyces sp. 23-23 Isolate Unclassified
12 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
13 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
14 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
15 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
16 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
17 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
18 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
19 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
20 2919069694 Microbacterium sp. 1154 Isolate Unclassified
21 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
22 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
23 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
24 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
25 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
26 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
27 2977228692 Microbacterium sp. SORGH_AS 421 Isolate Unclassified
28 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
29 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
30 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
31 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
32 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
33 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
34 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
35 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
36 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
37 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
38 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
41 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
42 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
43 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
44 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
45 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
46 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
47 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
48 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
49 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
50 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
51 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
52 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
53 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
54 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
55 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
56 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
57 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
58 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
59 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
60 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
61 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
62 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
63 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
64 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
65 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
66 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
67 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
68 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
69 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
70 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
71 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
72 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
73 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
74 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
75 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
76 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
77 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
78 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
79 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
80 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
81 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
82 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
83 8057568493 Actinorhabdospora filicis NBRC 111898 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 68.81
Metatranscriptomes 0
Isolates 31.19

Biome Distribution

Category Percentage (%)
Aerial Root 0.92
Bulb 0
Endosphere 7.34
Nodule 0
Rhizoplane 9.17
Rhizosphere 35.78
Stem 0
Stem Tuber 0
Unclassified 46.79

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10003018 3300001979 Bacteria 7451
2 JGI25154J39366_1001355 3300002738 Bacteria 8957
3 rootH2_10106839 3300003320 Bacteria 4111
4 Ga0075365_10004127 3300006038 Bacteria 7638
5 Ga0075369_10060356 3300006186 Bacteria 1654
6 Ga0105244_10190230 3300009036 Bacteria 971
7 Ga0157371_10041953 3300013102 Bacteria 3263
8 Ga0157370_10132400 3300013104 Bacteria 2325
9 Ga0157370_10268207 3300013104 Bacteria 1577
10 Ga0157370_10943079 3300013104 Bacteria 782
11 Ga0157372_10727934 3300013307 Bacteria 1154
12 Ga0163163_11373973 3300014325 Bacteria 768
13 Ga0163161_10113591 3300017792 Bacteria 2027
14 Ga0163161_11622392 3300017792 Bacteria 571
15 Ga0209646_1000071 3300025246 Bacteria 228702
16 Ga0307405_10298669 3300031731 Bacteria 1221
17 Ga0307406_10000821 3300031901 Bacteria 17418
18 Ga0307406_10009301 3300031901 Bacteria 5506
19 Ga0307412_10259974 3300031911 Bacteria 1353
20 Ga0307416_100811329 3300032002 Bacteria 1032
21 Ga0307414_10120463 3300032004 Bacteria 2016
22 Ga0307414_10374530 3300032004 Bacteria 1229
23 Ga0307414_10815992 3300032004 Bacteria 851
24 Ga0395900_0791317 3300037418 Bacteria 877
25 Ga0395898_0082022 3300037466 Bacteria 3109
26 Ga0439465_0057755 3300041413 Bacteria 1281
27 Ga0451791_1744299 3300041451 Bacteria 900
28 Ga0451841_0884716 3300041498 Bacteria 673
29 Ga0466970_0202682 3300044765 Bacteria 1104
30 Ga0466970_0372145 3300044765 Bacteria 813
31 Ga0495627_000393 3300046453 Bacteria 39677
32 Ga0495638_0066264 3300046460 Bacteria 2220
33 Ga0495644_0194635 3300046523 Bacteria 781
34 Ga0496100_1251437 3300048903 Bacteria 586
35 Ga0496104_0020999 3300048907 Bacteria 5991
36 Ga0496105_0016186 3300048908 Bacteria 5949
37 Ga0496105_0673506 3300048908 Bacteria 796
38 Ga0496108_0260746 3300048911 Bacteria 1508
39 Ga0496109_0236870 3300048912 Bacteria 1717
40 Ga0496113_0072756 3300048916 Bacteria 2617
41 Ga0496114_0419383 3300048917 Bacteria 1185
42 Ga0496115_0957249 3300048918 Bacteria 657
43 Ga0496117_0000053 3300048920 Bacteria 279396
44 Ga0496117_0003089 3300048920 Bacteria 19931
45 Ga0496117_0018670 3300048920 Bacteria 5732
46 Ga0496117_0314814 3300048920 Bacteria 823
47 Ga0496117_0534685 3300048920 Bacteria 561
48 Ga0496118_0043392 3300048921 Bacteria 3536
49 Ga0496119_0002404 3300048922 Bacteria 20558
50 Ga0496119_0010769 3300048922 Bacteria 7657
51 Ga0496119_0241673 3300048922 Bacteria 914
52 Ga0496120_0003532 3300048923 Bacteria 14148
53 Ga0496120_0026228 3300048923 Bacteria 3601
54 Ga0496122_0003193 3300048925 Bacteria 21866
55 Ga0496122_0098523 3300048925 Bacteria 1963
56 Ga0496122_0119287 3300048925 Bacteria 1706
57 Ga0496123_0012608 3300048926 Bacteria 7186
58 Ga0496123_0080393 3300048926 Bacteria 1987
59 Ga0496123_0143848 3300048926 Bacteria 1299
60 Ga0496124_0024369 3300048927 Bacteria 5504
61 Ga0496125_0004557 3300048928 Bacteria 15898
62 Ga0496125_0012431 3300048928 Bacteria 8452
63 Ga0496125_0024172 3300048928 Bacteria 5590
64 Ga0496125_0110814 3300048928 Bacteria 1988
65 Ga0496125_0194457 3300048928 Bacteria 1335
66 Ga0496126_0033990 3300048929 Bacteria 4794
67 Ga0496126_0382886 3300048929 Bacteria 1145
68 Ga0496126_0571769 3300048929 Bacteria 894
69 Ga0501034_0007983 3300049571 Bacteria 11237
70 nmdc:mga00v17_145672_c1 3300050491 Bacteria 1520
71 nmdc:mga0yw44_172022_c1 3300050492 Bacteria 1423
72 nmdc:mga04h51_209654_c1 3300050495 Bacteria 768
73 nmdc:mga0sz30_31088_c1 3300050516 Bacteria 2208
74 Ga0500573_0000023 3300053140 Bacteria 152268
75 Ga0500573_0105420 3300053140 Bacteria 1583

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300031901 Ga0307406_10000821 Ga0307406_100008215 120
2 3300013104 Ga0157370_10132400 Ga0157370_101324002 123
3 3300013104 Ga0157370_10943079 Ga0157370_109430791 123
4 3300046453 Ga0495627_000393 Ga0495627_000393_12154_12693 130
5 3300031901 Ga0307406_10009301 Ga0307406_100093016 134
6 3300032004 Ga0307414_10120463 Ga0307414_101204632 134
7 3300048903 Ga0496100_1251437 Ga0496100_1251437_26_511 149
8 3300032004 Ga0307414_10374530 Ga0307414_103745301 150
9 3300041451 Ga0451791_1744299 Ga0451791_1744299_186_737 151
10 iso_pu_bacteria 8057568493 8057570882 152
11 3300048925 Ga0496122_0098523 Ga0496122_0098523_274_756 155
12 3300048926 Ga0496123_0143848 Ga0496123_0143848_422_904 155
13 3300048928 Ga0496125_0194457 Ga0496125_0194457_854_1321 155
14 iso_pu_bacteria 2808606372 2808901875 156
15 iso_pu_bacteria 2857723135 2857724164 156
16 iso_pu_bacteria 2857737099 2857738483 156
17 iso_pu_bacteria 2919443155 2919446329 156
18 3300048929 Ga0496126_0033990 Ga0496126_0033990_1148_1642 157
19 iso_pu_bacteria 2808606306 2808631102 157
20 iso_pu_bacteria 2833709550 2833711056 157
21 3300032004 Ga0307414_10815992 Ga0307414_108159921 158
22 iso_pu_bacteria 2757320536 2758226037 158
23 iso_pu_bacteria 2773857758 2774380272 158
24 iso_pu_bacteria 2904509784 2904511892 158
25 iso_pu_bacteria 2908678064 2908680814 158
26 iso_pu_bacteria 2919069694 2919071637 158
27 iso_pu_bacteria 2974294766 2974297271 158
28 iso_pu_bacteria 2974324384 2974326494 158
29 iso_pu_bacteria 2977228692 2977231517 158
30 iso_pu_bacteria 2977236895 2977240298 158
31 iso_pu_bacteria 2977264416 2977266735 158
32 iso_pu_bacteria 2984542743 2984545423 158
33 iso_pu_bacteria 8016254467 8016257447 158
34 iso_pu_bacteria 2946041624 2946044580 159
35 iso_pu_bacteria 8045830549 8045831682 159
36 3300013104 Ga0157370_10268207 Ga0157370_102682072 160
37 3300014325 Ga0163163_11373973 Ga0163163_113739732 160
38 3300017792 Ga0163161_10113591 Ga0163161_101135913 160
39 3300031731 Ga0307405_10298669 Ga0307405_102986692 160
40 3300032002 Ga0307416_100811329 Ga0307416_1008113292 160
41 3300041498 Ga0451841_0884716 Ga0451841_0884716_112_594 160
42 3300046460 Ga0495638_0066264 Ga0495638_0066264_1221_1703 160
43 3300048920 Ga0496117_0003089 Ga0496117_0003089_9924_10406 160
44 3300048922 Ga0496119_0241673 Ga0496119_0241673_405_887 160
45 3300048925 Ga0496122_0119287 Ga0496122_0119287_611_1093 160
46 3300048926 Ga0496123_0080393 Ga0496123_0080393_90_572 160
47 3300048928 Ga0496125_0012431 Ga0496125_0012431_2074_2598 160
48 3300048928 Ga0496125_0024172 Ga0496125_0024172_2647_3129 160
49 3300048928 Ga0496125_0110814 Ga0496125_0110814_77_559 160
50 3300048929 Ga0496126_0382886 Ga0496126_0382886_644_1126 160
51 3300048929 Ga0496126_0571769 Ga0496126_0571769_322_804 160
52 3300053140 Ga0500573_0000023 Ga0500573_0000023_38874_39359 160
53 iso_pu_bacteria 2643221542 2643733413 160
54 iso_pu_bacteria 2643221546 2643753439 160
55 iso_pu_bacteria 2643221630 2644169987 160
56 iso_pu_bacteria 2852646457 2852648651 160
57 iso_pu_bacteria 2852663356 2852666975 160
58 iso_pu_bacteria 2945968032 2945968078 160
59 iso_pu_bacteria 2946080515 2946080659 160
60 iso_pu_bacteria 8004182704 8004184896 160
61 3300006038 Ga0075365_10004127 Ga0075365_100041274 161
62 3300006186 Ga0075369_10060356 Ga0075369_100603562 161
63 3300048907 Ga0496104_0020999 Ga0496104_0020999_1234_1719 161
64 3300048908 Ga0496105_0016186 Ga0496105_0016186_673_1158 161
65 3300048911 Ga0496108_0260746 Ga0496108_0260746_32_517 161
66 3300048912 Ga0496109_0236870 Ga0496109_0236870_783_1268 161
67 3300048916 Ga0496113_0072756 Ga0496113_0072756_1379_1864 161
68 3300048918 Ga0496115_0957249 Ga0496115_0957249_25_510 161
69 3300050492 nmdc:mga0yw44_172022_c1 nmdc:mga0yw44_172022_c1_22_507 161
70 3300050495 nmdc:mga04h51_209654_c1 nmdc:mga04h51_209654_c1_112_597 161
71 3300050516 nmdc:mga0sz30_31088_c1 nmdc:mga0sz30_31088_c1_1067_1552 161
72 iso_pu_bacteria 2643221553 2643786105 161
73 iso_pu_bacteria 2747842429 2747953044 161
74 iso_pu_bacteria 2857729791 2857730066 161
75 3300009036 Ga0105244_10190230 Ga0105244_101902301 162
76 3300017792 Ga0163161_11622392 Ga0163161_116223921 162
77 3300041413 Ga0439465_0057755 Ga0439465_0057755_630_1121 162
78 3300044765 Ga0466970_0372145 Ga0466970_0372145_87_587 162
79 3300048908 Ga0496105_0673506 Ga0496105_0673506_258_770 162
80 3300048917 Ga0496114_0419383 Ga0496114_0419383_641_1129 162
81 3300048920 Ga0496117_0000053 Ga0496117_0000053_183032_183520 162
82 3300048920 Ga0496117_0018670 Ga0496117_0018670_5166_5660 162
83 3300048920 Ga0496117_0534685 Ga0496117_0534685_47_535 162
84 3300048921 Ga0496118_0043392 Ga0496118_0043392_561_1055 162
85 3300048922 Ga0496119_0002404 Ga0496119_0002404_20027_20515 162
86 3300048922 Ga0496119_0010769 Ga0496119_0010769_4271_4759 162
87 3300048923 Ga0496120_0003532 Ga0496120_0003532_3260_3748 162
88 3300048923 Ga0496120_0026228 Ga0496120_0026228_3048_3536 162
89 3300048925 Ga0496122_0003193 Ga0496122_0003193_17597_18085 162
90 3300048926 Ga0496123_0012608 Ga0496123_0012608_2908_3396 162
91 3300048927 Ga0496124_0024369 Ga0496124_0024369_3155_3643 162
92 3300048928 Ga0496125_0004557 Ga0496125_0004557_5770_6258 162
93 3300046523 Ga0495644_0194635 Ga0495644_0194635_168_671 163
94 3300049571 Ga0501034_0007983 Ga0501034_0007983_3181_3672 163
95 3300053140 Ga0500573_0105420 Ga0500573_0105420_106_642 163
96 3300001979 JGI24740J21852_10003018 JGI24740J21852_100030186 164
97 3300002738 JGI25154J39366_1001355 JGI25154J39366_10013559 164
98 3300003320 rootH2_10106839 rootH2_101068392 164
99 3300013102 Ga0157371_10041953 Ga0157371_100419534 164
100 3300013307 Ga0157372_10727934 Ga0157372_107279341 164
101 3300025246 Ga0209646_1000071 Ga0209646_1000071169 164
102 3300031911 Ga0307412_10259974 Ga0307412_102599742 164
103 3300037418 Ga0395900_0791317 Ga0395900_0791317_173_667 164
104 3300037466 Ga0395898_0082022 Ga0395898_0082022_1258_1752 164
105 3300044765 Ga0466970_0202682 Ga0466970_0202682_26_520 164
106 3300048920 Ga0496117_0314814 Ga0496117_0314814_65_559 164
107 3300050491 nmdc:mga00v17_145672_c1 nmdc:mga00v17_145672_c1_159_653 164
108 iso_pu_bacteria 2643221724 2644680497 164
109 iso_pu_bacteria 2728369380 2730229956 164

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12688

TPR_5

Tetratrico peptide repeat

52

169

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
2v5f-assembly1.cif.gz_A crystal structure of wild type peptide-binding domain of human type i collagen prolyl 4-hydroxylase. 0.8752 39 113
4bt8-assembly1.cif.gz_B crystal structure of the apo form of n-terminal domain and peptide substrate binding domain of prolyl-4 hydroxylase type i from human 0.874 39 113
4btb-assembly1.cif.gz_A crystal structure of the peptide(pro)9 bound complex of n-terminal domain and peptide substrate binding domain of prolyl-4 hydroxylase (residues 1-238) type i from human 0.8693 39 113
8fwd-assembly1.cif.gz_2 fast and versatile sequence- independent protein docking for nanomaterials design using rpxdock 0.8607 40 141
8fwd-assembly1.cif.gz_P fast and versatile sequence- independent protein docking for nanomaterials design using rpxdock 0.8606 40 141
ID Description Score Start End Superfamily
af_Q6Z697_487_596_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8832 40 144 1.25.40.10
af_A0A0R0E971_72_178_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8814 39 141 1.25.40.10
af_Q09485_2_117_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8687 40 141 1.25.40.10
af_F4KCL7_477_587_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8683 40 142 1.25.40.10
af_A0A1D6NUQ7_146_259_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8642 40 147 1.25.40.10
ID Description Score Start End GO Terms
AF-A0A6L9XZ70-F1-model_v4 Tetratricopeptide repeat protein 0.9842 56 158
AF-A0A0F0LK83-F1-model_v4 Tetratrico peptide repeat protein 0.9823 1 164
AF-A0A259S7D1-F1-model_v4 Tetratrico peptide repeat group 5 domain-containing protein 0.9822 71 164
AF-A0A1Y2KBL2-F1-model_v4 deleted 0.9769 1 163
AF-A0A259S7D1-F1-model_v4 Tetratrico peptide repeat group 5 domain-containing protein 0.9719 71 164

Feature Viewer

pLDDT pTM Quality
95.1 0.88 High
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Predicted Structure (AlphaFold2)

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