F052410

General Info

Members Datasets Scaffolds Average Seq Length
109 84 109 293

Family's Representative Sequence

Representative Sequence 3300005337|Ga0070682_100068745|Ga0070682_1000687452
Length 324
Sequence MTEIQSVSAPINTTPTRAVQPNSIAAWLLASRPKTLSAAAAPVLVGTACASARGQVQWGPALAALLGALLLQIGANFANDVFDFEKGADTAERLGPTRAVQAGLLSARSMRRGMWLVFALALAIGVYLTTVSGPVILLIGCASIASAIAYTGGPYPLGYHGLGDVFVFIFFGLVAVCGTTLVEIGHVPGLAVASAIPVGALATAILVVNNLRDRVTDLGAGKRTLAVRYGRGFALGQYRSLIAVSYLTPLGLALSGSTGPEVMLSWLSLPLALKTERAVSKTEGRALNPLLAATAKLLAIFGLLFALGLCLRGLLARFGVASAP

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
8 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
9 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
10 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
11 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
14 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
15 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
16 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
17 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
18 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
19 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
20 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
22 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
23 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
24 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
25 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
26 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
27 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
44 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
45 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
46 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
47 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
48 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
49 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
50 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
51 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
52 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
53 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
54 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
55 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
56 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
57 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
58 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
59 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
60 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
61 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
62 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
63 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
64 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
65 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
66 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
67 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
69 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
70 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
71 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
72 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
73 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
74 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
75 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
76 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
77 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
78 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
79 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
80 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
81 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
82 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
83 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
84 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.83
Nodule 0
Rhizoplane 2.75
Rhizosphere 79.82
Stem 0
Stem Tuber 0
Unclassified 15.6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10073427 3300003320 Bacteria 1615
2 rootH2_10118691 3300003320 Bacteria 2887
3 rootH1_10126192 3300003323 Bacteria 6351
4 rootH1_10131190 3300003323 Bacteria 10470
5 Ga0068869_100041981 3300005334 Bacteria 3277
6 Ga0070680_100283770 3300005336 Archaea 1403
7 Ga0070682_100068745 3300005337 Unclassified 2260
8 Ga0068868_100316651 3300005338 Bacteria 1328
9 Ga0070681_10410368 3300005458 Archaea 1266
10 Ga0070707_100029808 3300005468 Bacteria 5192
11 Ga0070707_100355616 3300005468 Bacteria 1422
12 Ga0070679_100042789 3300005530 Bacteria 4511
13 Ga0070672_100006574 3300005543 Bacteria 7822
14 Ga0070665_100001563 3300005548 Bacteria 26398
15 Ga0068855_100000013 3300005563 Bacteria 234207
16 Ga0068855_100000889 3300005563 Bacteria 37099
17 Ga0068855_100407021 3300005563 Archaea 1490
18 Ga0068859_100084089 3300005617 Bacteria 3226
19 Ga0068864_100365358 3300005618 Bacteria 1365
20 Ga0068861_100248485 3300005719 Bacteria 1517
21 Ga0068870_10214352 3300005840 Bacteria 1175
22 Ga0075429_100027147 3300006880 Bacteria 4969
23 Ga0075429_100187831 3300006880 Bacteria 1811
24 Ga0097620_100084094 3300006931 Bacteria 3226
25 Ga0105245_10001155 3300009098 Bacteria 23872
26 Ga0105245_10008879 3300009098 Bacteria 8771
27 Ga0105245_10335737 3300009098 Bacteria 1493
28 Ga0114129_11341851 3300009147 Bacteria 885
29 Ga0105241_10036409 3300009174 Bacteria 3703
30 Ga0157374_10030485 3300013296 Bacteria 4897
31 Ga0157379_10645654 3300014968 Bacteria 990
32 Ga0157376_10102626 3300014969 Bacteria 2502
33 Ga0213876_10072315 3300021384 Bacteria 1821
34 Ga0213875_10131102 3300021388 Unclassified 1172
35 Ga0207682_10008914 3300025893 Bacteria 3967
36 Ga0207643_10286606 3300025908 Bacteria 1022
37 Ga0207684_10175164 3300025910 Unclassified 1849
38 Ga0207684_10213115 3300025910 Bacteria 1666
39 Ga0207707_10304558 3300025912 Archaea 1377
40 Ga0207660_10093862 3300025917 Archaea 2230
41 Ga0207652_10006763 3300025921 Bacteria 9247
42 Ga0207687_10000465 3300025927 Bacteria 27650
43 Ga0207687_10083493 3300025927 Bacteria 2313
44 Ga0207669_10062726 3300025937 Bacteria 2291
45 Ga0207691_10001881 3300025940 Bacteria 20513
46 Ga0207689_10048068 3300025942 Bacteria 3520
47 Ga0207667_10000227 3300025949 Bacteria 79027
48 Ga0207667_10007875 3300025949 Bacteria 12720
49 Ga0207667_10345129 3300025949 Archaea 1519
50 Ga0207648_10134804 3300026089 Bacteria 2175
51 Ga0207676_10322831 3300026095 Bacteria 1418
52 Ga0207674_10106847 3300026116 Bacteria 2776
53 Ga0207675_100446546 3300026118 Bacteria 1281
54 Ga0207675_100490751 3300026118 Unclassified 1222
55 Ga0268266_10097644 3300028379 Bacteria 2583
56 Ga0307517_10039262 3300028786 Bacteria 5206
57 Ga0307515_10221051 3300028794 Bacteria 1712
58 Ga0307513_10028165 3300031456 Bacteria 6429
59 Ga0307509_10013216 3300031507 Bacteria 9794
60 Ga0307508_10001652 3300031616 Bacteria 24831
61 Ga0265314_10013475 3300031711 Bacteria 6601
62 Ga0307516_10004195 3300031730 Bacteria 17952
63 Ga0316577_10007755 3300031733 Bacteria 5734
64 Ga0307406_10141694 3300031901 Bacteria 1702
65 Ga0307406_10277257 3300031901 Bacteria 1277
66 Ga0307415_100335283 3300032126 Archaea 1267
67 Ga0373949_0000104 3300035090 Bacteria 31468
68 Ga0373943_0094372 3300035170 Bacteria 1555
69 Ga0373961_0000141 3300035241 Bacteria 35831
70 Ga0316574_0077309 3300035398 Bacteria 2109
71 Ga0316574_0090716 3300035398 Bacteria 1948
72 Ga0373925_0151958 3300037068 Bacteria 1819
73 Ga0436365_1151496 3300039437 Bacteria 4099
74 Ga0436365_1151846 3300039437 Bacteria 15584
75 Ga0436365_1685828 3300039437 Bacteria 1974
76 Ga0451789_0315150 3300041443 Unclassified 1050
77 Ga0451807_1322147 3300041486 Unclassified 3069
78 Ga0451851_0007377 3300041507 Bacteria 1783
79 Ga0451853_0870196 3300041512 Bacteria 7033
80 Ga0451577_0323323 3300042876 Bacteria 1399
81 Ga0466969_0185265 3300044656 Archaea 952
82 Ga0495649_0088013 3300046694 Bacteria 1657
83 Ga0496115_0402885 3300048918 Archaea 1110
84 Ga0501034_0320125 3300049571 Bacteria 1484
85 Ga0501047_0008952 3300049581 Bacteria 9452
86 Ga0501067_0007191 3300049583 Bacteria 6185
87 Ga0501067_0024881 3300049583 Bacteria 3320
88 Ga0501068_0108992 3300049584 Bacteria 1721
89 Ga0501070_0017106 3300049586 Bacteria 6085
90 Ga0501070_0142214 3300049586 Unclassified 1981
91 Ga0501071_0128939 3300049587 Bacteria 1878
92 Ga0501073_0102022 3300049589 Unclassified 1992
93 Ga0501073_0143008 3300049589 Bacteria 1658
94 Ga0501076_0112986 3300049592 Bacteria 2197
95 Ga0501077_0046713 3300049593 Bacteria 2751
96 Ga0501225_0012251 3300049705 Bacteria 2409
97 Ga0501080_0028486 3300049742 Bacteria 5197
98 Ga0501080_0097075 3300049742 Bacteria 2736
99 Ga0501081_0234185 3300049743 Bacteria 1338
100 Ga0501083_0005974 3300049744 Bacteria 8619
101 Ga0501083_0022742 3300049744 Unclassified 4350
102 nmdc:mga09592_308937_c1 3300050508 Bacteria 1370
103 nmdc:mga09592_48072_c1 3300050508 Bacteria 3596
104 nmdc:mga09592_76464_c1 3300050508 Bacteria 2847
105 Ga0500597_065824 3300053120 Bacteria 1561
106 Ga0500616_0049506 3300053153 Bacteria 2223
107 Ga0501084_0009776 3300054114 Bacteria 7931
108 Ga0501084_0337469 3300054114 Bacteria 1273
109 Ga0501082_0090423 3300060353 Bacteria 2643

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049584 Ga0501068_0108992 Ga0501068_0108992_496_1350 262
2 3300049586 Ga0501070_0017106 Ga0501070_0017106_3408_4262 262
3 3300005548 Ga0070665_100001563 Ga0070665_1000015635 266
4 3300028379 Ga0268266_10097644 Ga0268266_100976442 266
5 3300048918 Ga0496115_0402885 Ga0496115_0402885_63_926 266
6 3300009147 Ga0114129_11341851 Ga0114129_113418511 268
7 3300021384 Ga0213876_10072315 Ga0213876_100723152 269
8 3300039437 Ga0436365_1685828 Ga0436365_1685828_94_912 271
9 3300005618 Ga0068864_100365358 Ga0068864_1003653582 273
10 3300005719 Ga0068861_100248485 Ga0068861_1002484852 273
11 3300005840 Ga0068870_10214352 Ga0068870_102143522 273
12 3300009098 Ga0105245_10335737 Ga0105245_103357372 273
13 3300025908 Ga0207643_10286606 Ga0207643_102866061 273
14 3300026089 Ga0207648_10134804 Ga0207648_101348042 273
15 3300026095 Ga0207676_10322831 Ga0207676_103228312 273
16 3300026118 Ga0207675_100446546 Ga0207675_1004465462 273
17 3300049589 Ga0501073_0102022 Ga0501073_0102022_1080_1901 273
18 3300035398 Ga0316574_0077309 Ga0316574_0077309_463_1347 274
19 3300014968 Ga0157379_10645654 Ga0157379_106456541 277
20 3300035090 Ga0373949_0000104 Ga0373949_0000104_28950_29837 277
21 3300005563 Ga0068855_100407021 Ga0068855_1004070212 278
22 3300025912 Ga0207707_10304558 Ga0207707_103045582 278
23 3300025917 Ga0207660_10093862 Ga0207660_100938622 278
24 3300025921 Ga0207652_10006763 Ga0207652_100067637 278
25 3300025949 Ga0207667_10345129 Ga0207667_103451292 278
26 3300005468 Ga0070707_100029808 Ga0070707_1000298082 279
27 3300035241 Ga0373961_0000141 Ga0373961_0000141_8791_9762 279
28 3300006880 Ga0075429_100187831 Ga0075429_1001878312 280
29 3300031901 Ga0307406_10141694 Ga0307406_101416942 280
30 3300032126 Ga0307415_100335283 Ga0307415_1003352832 280
31 3300049581 Ga0501047_0008952 Ga0501047_0008952_3868_4713 281
32 3300028786 Ga0307517_10039262 Ga0307517_100392622 282
33 3300049589 Ga0501073_0143008 Ga0501073_0143008_588_1442 283
34 3300049743 Ga0501081_0234185 Ga0501081_0234185_231_1085 283
35 3300060353 Ga0501082_0090423 Ga0501082_0090423_223_1077 283
36 3300005563 Ga0068855_100000013 Ga0068855_10000001362 284
37 3300025949 Ga0207667_10000227 Ga0207667_1000022741 284
38 3300049742 Ga0501080_0028486 Ga0501080_0028486_815_1669 284
39 3300049744 Ga0501083_0005974 Ga0501083_0005974_5037_5891 284
40 3300049744 Ga0501083_0022742 Ga0501083_0022742_2544_3398 284
41 3300054114 Ga0501084_0009776 Ga0501084_0009776_695_1549 284
42 3300054114 Ga0501084_0337469 Ga0501084_0337469_329_1183 284
43 3300006880 Ga0075429_100027147 Ga0075429_1000271472 286
44 3300050508 nmdc:mga09592_48072_c1 nmdc:mga09592_48072_c1_175_1038 286
45 3300050508 nmdc:mga09592_76464_c1 nmdc:mga09592_76464_c1_210_1073 286
46 3300005336 Ga0070680_100283770 Ga0070680_1002837702 287
47 3300005458 Ga0070681_10410368 Ga0070681_104103682 287
48 3300005530 Ga0070679_100042789 Ga0070679_1000427893 287
49 3300013296 Ga0157374_10030485 Ga0157374_100304852 287
50 3300026116 Ga0207674_10106847 Ga0207674_101068472 287
51 3300031507 Ga0307509_10013216 Ga0307509_100132168 287
52 3300042876 Ga0451577_0323323 Ga0451577_0323323_370_1236 287
53 3300005334 Ga0068869_100041981 Ga0068869_1000419812 288
54 3300009098 Ga0105245_10001155 Ga0105245_100011556 288
55 3300025927 Ga0207687_10000465 Ga0207687_100004653 288
56 3300025942 Ga0207689_10048068 Ga0207689_100480682 288
57 3300031901 Ga0307406_10277257 Ga0307406_102772572 288
58 3300025937 Ga0207669_10062726 Ga0207669_100627262 289
59 3300046694 Ga0495649_0088013 Ga0495649_0088013_224_1099 290
60 3300049705 Ga0501225_0012251 Ga0501225_0012251_1082_1960 291
61 3300053153 Ga0500616_0049506 Ga0500616_0049506_141_1016 291
62 3300050508 nmdc:mga09592_308937_c1 nmdc:mga09592_308937_c1_210_1088 292
63 3300005468 Ga0070707_100355616 Ga0070707_1003556161 293
64 3300049583 Ga0501067_0024881 Ga0501067_0024881_1320_2201 293
65 3300049587 Ga0501071_0128939 Ga0501071_0128939_380_1303 294
66 3300049592 Ga0501076_0112986 Ga0501076_0112986_189_1112 294
67 3300049742 Ga0501080_0097075 Ga0501080_0097075_1304_2227 294
68 3300031711 Ga0265314_10013475 Ga0265314_100134756 295
69 3300053120 Ga0500597_065824 Ga0500597_065824_573_1484 295
70 3300005563 Ga0068855_100000889 Ga0068855_1000008898 298
71 3300025949 Ga0207667_10007875 Ga0207667_100078757 298
72 3300035398 Ga0316574_0090716 Ga0316574_0090716_707_1603 298
73 3300039437 Ga0436365_1151496 Ga0436365_1151496_2386_3285 298
74 3300035170 Ga0373943_0094372 Ga0373943_0094372_555_1460 299
75 3300037068 Ga0373925_0151958 Ga0373925_0151958_261_1166 299
76 3300039437 Ga0436365_1151846 Ga0436365_1151846_472_1374 299
77 3300025910 Ga0207684_10175164 Ga0207684_101751641 300
78 3300025910 Ga0207684_10213115 Ga0207684_102131152 300
79 3300041443 Ga0451789_0315150 Ga0451789_0315150_21_926 301
80 3300044656 Ga0466969_0185265 Ga0466969_0185265_35_940 301
81 3300049586 Ga0501070_0142214 Ga0501070_0142214_633_1538 301
82 3300003320 rootH2_10118691 rootH2_101186912 303
83 3300021388 Ga0213875_10131102 Ga0213875_101311022 305
84 3300049593 Ga0501077_0046713 Ga0501077_0046713_787_1743 305
85 3300031733 Ga0316577_10007755 Ga0316577_100077554 312
86 3300003323 rootH1_10126192 rootH1_101261925 313
87 3300009098 Ga0105245_10008879 Ga0105245_100088798 313
88 3300009174 Ga0105241_10036409 Ga0105241_100364094 313
89 3300014969 Ga0157376_10102626 Ga0157376_101026263 313
90 3300025927 Ga0207687_10083493 Ga0207687_100834932 313
91 3300049583 Ga0501067_0007191 Ga0501067_0007191_3992_4945 313
92 3300026118 Ga0207675_100490751 Ga0207675_1004907512 314
93 3300041486 Ga0451807_1322147 Ga0451807_1322147_1820_2764 314
94 3300041507 Ga0451851_0007377 Ga0451851_0007377_61_1017 314
95 3300041512 Ga0451853_0870196 Ga0451853_0870196_2484_3440 314
96 3300049571 Ga0501034_0320125 Ga0501034_0320125_17_964 314
97 3300005617 Ga0068859_100084089 Ga0068859_1000840893 315
98 3300006931 Ga0097620_100084094 Ga0097620_1000840943 315
99 3300031616 Ga0307508_10001652 Ga0307508_1000165211 315
100 3300031730 Ga0307516_10004195 Ga0307516_1000419510 315
101 3300031456 Ga0307513_10028165 Ga0307513_100281653 318
102 3300028794 Ga0307515_10221051 Ga0307515_102210511 319
103 3300005338 Ga0068868_100316651 Ga0068868_1003166512 320
104 3300005543 Ga0070672_100006574 Ga0070672_1000065747 320
105 3300025893 Ga0207682_10008914 Ga0207682_100089144 320
106 3300025940 Ga0207691_10001881 Ga0207691_100018817 320
107 3300003320 rootH2_10073427 rootH2_100734272 322
108 3300003323 rootH1_10131190 rootH1_101311906 322
109 3300005337 Ga0070682_100068745 Ga0070682_1000687452 322

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01040

UbiA

UbiA prenyltransferase family

39

288

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
8djm-assembly1.cif.gz_B hmgcr-ubiad1 complex state 1 0.8191 23 308
8djm-assembly1.cif.gz_B hmgcr-ubiad1 complex state 1 0.7748 23 308
4od4-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.7556 35 302
4od4-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.7244 35 302
4tq6-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.695 24 310
ID Description Score Start End Superfamily
af_P9WIP3_19_264_1.10.357.140 Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;UbiA prenyltransferase 0.9309 37 282 1.10.357.140
af_D3ZG27_215_338_1.20.120.550 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Membrane associated eicosanoid/glutathione metabolism-like domain 0.9305 192 306 1.20.120.550
af_Q2FZM0_184_310_1.20.120.1780 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);UbiA prenyltransferase 0.9284 191 312 1.20.120.1780
af_P32166_24_288_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.9193 41 292 1.20.1070.10
af_P9WIP3_19_264_1.10.357.140 Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;UbiA prenyltransferase 0.913 37 282 1.10.357.140
ID Description Score Start End GO Terms
AF-A0A0S8C226-F1-model_v4 1,4-dihydroxy-2-naphthoate octaprenyltransferase (EC 2.5.1.74) 0.9905 146 308 GO:0009234
GO:0016020
GO:0032194
GO:0042371
GO:0046428
AF-A0A4U1BNZ5-F1-model_v4 1,4-dihydroxy-2-naphthoate octaprenyltransferase (DHNA-octaprenyltransferase) (EC 2.5.1.74) 0.98 21 307 GO:0005886
GO:0009234
GO:0032194
GO:0042371
GO:0046428
AF-A0A2D6PP01-F1-model_v4 1,4-dihydroxy-2-naphthoate octaprenyltransferase (EC 2.5.1.74) 0.9795 82 307 GO:0009234
GO:0016020
GO:0032194
GO:0042371
GO:0046428
AF-A0A382SHQ5-F1-model_v4 1,4-dihydroxy-2-naphthoate octaprenyltransferase 0.9764 75 307 GO:0004659
GO:0009234
GO:0016020
GO:0032194
GO:0042371
AF-A0A0S8C226-F1-model_v4 1,4-dihydroxy-2-naphthoate octaprenyltransferase (EC 2.5.1.74) 0.9727 146 308 GO:0009234
GO:0016020
GO:0032194
GO:0042371
GO:0046428

Feature Viewer

pLDDT pTM Quality
88.2 0.86 High
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Predicted Structure (AlphaFold2)

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