F045620

General Info

Members Datasets Scaffolds Average Seq Length
107 84 215 194

Family's Representative Sequence

Representative Sequence 3300050489|nmdc:mga03683_12776_c1|nmdc:mga03683_12776_c1_886_1566
Length 226
Sequence VGAKLGCPETGHGVSCFMSHHGLTTHRSKEIAMPAQAPALSDERALLLVYIAQQRDGVRNAAFGLTDEQARLTPTVSSLSIGGLIKHVAKTERGWIDMVRAVPRTTDQADDEADYVDGFRLRDDETLADALAAYELVQRETEEVLASIDDLGRDVPVPKGVPWFPDDVEAWSVRWVLLHVIEETARHAGHADLIREAIDGATMYPLLAAAEGWPATDWLQPWTPSR

Samples

Sample ID Description Type Environment
1 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
6 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
7 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
10 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
15 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
16 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
17 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
18 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
19 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
20 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
21 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
22 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
23 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
24 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
25 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
26 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
29 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
30 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
38 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
40 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
41 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
42 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
43 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
44 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
45 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
46 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
47 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
48 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
49 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
50 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
51 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
52 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
53 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
54 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
55 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
56 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
57 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
58 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
59 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
60 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
61 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
62 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
63 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
64 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
65 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
66 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
67 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
68 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
69 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
70 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
71 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
72 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
73 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
74 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
75 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
76 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
77 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
78 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
79 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
80 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
81 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
82 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
83 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
84 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.26
Metatranscriptomes 0
Isolates 3.74

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 20.56
Nodule 0
Rhizoplane 3.74
Rhizosphere 67.29
Stem 0
Stem Tuber 0.93
Unclassified 2.8

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga03683_12776_c1 3300050489 Bacteria 3074
2 rootH1_10152747 3300003316 Bacteria 1437
3 rootH1_10152747 3300003323 Bacteria 1518
4 JGI25407J50210_10094577 3300003373 Bacteria 739
5 Ga0070668_100032575 3300005347 Bacteria 3966
6 Ga0070669_100163726 3300005353 Bacteria 1730
7 Ga0070674_100790345 3300005356 Bacteria 819
8 Ga0070674_100913845 3300005356 Bacteria 765
9 Ga0070667_100842154 3300005367 Bacteria 852
10 Ga0070714_100014772 3300005435 Bacteria 6275
11 Ga0070700_100331111 3300005441 Bacteria 1122
12 Ga0070663_100001194 3300005455 Bacteria 14276
13 Ga0070706_100479879 3300005467 Bacteria 1157
14 Ga0070707_100177297 3300005468 Bacteria 2078
15 Ga0070699_100410589 3300005518 Bacteria 1225
16 Ga0070693_100265248 3300005547 Bacteria 1144
17 Ga0068864_101850813 3300005618 Bacteria 609
18 Ga0068861_100945821 3300005719 Bacteria 819
19 Ga0068861_101048036 3300005719 Bacteria 781
20 Ga0068860_100177075 3300005843 Bacteria 2061
21 Ga0081538_10000499 3300005981 Bacteria 43846
22 Ga0075365_10010904 3300006038 Bacteria 5322
23 Ga0075365_10081580 3300006038 Bacteria 2191
24 Ga0075365_10284582 3300006038 Bacteria 1163
25 Ga0075368_10002621 3300006042 Bacteria 5904
26 Ga0075363_100006972 3300006048 Bacteria 5166
27 Ga0075363_100023968 3300006048 Bacteria 3098
28 Ga0075364_10007224 3300006051 Bacteria 6582
29 Ga0075364_10239488 3300006051 Bacteria 1232
30 Ga0075362_10009882 3300006177 Bacteria 3706
31 Ga0075369_10154190 3300006186 Bacteria 1051
32 Ga0075370_10390137 3300006353 Bacteria 835
33 Ga0111539_10657071 3300009094 Unclassified 1221
34 Ga0111539_11099360 3300009094 Bacteria 924
35 Ga0114129_10148328 3300009147 Bacteria 3212
36 Ga0114129_10650424 3300009147 Bacteria 1361
37 Ga0105239_11463147 3300010375 Bacteria 789
38 Ga0157375_11746940 3300013308 Bacteria 737
39 Ga0207684_10229469 3300025910 Bacteria 1602
40 Ga0207684_10384168 3300025910 Bacteria 1207
41 Ga0207684_10506639 3300025910 Bacteria 1034
42 Ga0207646_11117550 3300025922 Bacteria 693
43 Ga0207681_10177185 3300025923 Bacteria 1621
44 Ga0207664_10012214 3300025929 Bacteria 6137
45 Ga0207668_10174404 3300025972 Bacteria 1689
46 Ga0207678_10000391 3300026067 Bacteria 39957
47 Ga0207708_10448881 3300026075 Bacteria 1074
48 Ga0207428_10202703 3300027907 Unclassified 1492
49 Ga0268264_10148843 3300028381 Bacteria 2097
50 Ga0307515_10129466 3300028794 Bacteria 2791
51 Ga0307513_10039124 3300031456 Bacteria 5259
52 Ga0307405_10098736 3300031731 Bacteria 1953
53 Ga0307413_10034680 3300031824 Bacteria 2887
54 Ga0307410_10325346 3300031852 Bacteria 1221
55 Ga0307406_10290754 3300031901 Bacteria 1251
56 Ga0307407_10191718 3300031903 Bacteria 1363
57 Ga0307412_10305343 3300031911 Bacteria 1260
58 Ga0307416_100014192 3300032002 Bacteria 5446
59 Ga0307416_101113275 3300032002 Bacteria 894
60 Ga0307415_100535943 3300032126 Bacteria 1030
61 Ga0307507_10004437 3300033179 Bacteria 24904
62 Ga0307510_10043927 3300033180 Bacteria 4848
63 Ga0439465_0037301 3300041413 Bacteria 1563
64 Ga0439465_0146441 3300041413 Bacteria 841
65 Ga0466972_0002175 3300044658 Bacteria 9624
66 Ga0466966_0107193 3300044684 Bacteria 1724
67 Ga0466961_0336081 3300044693 Bacteria 920
68 Ga0466963_0079523 3300044694 Bacteria 2218
69 Ga0466963_0844948 3300044694 Bacteria 645
70 Ga0466970_0078132 3300044765 Bacteria 1785
71 Ga0466960_0349090 3300044901 Bacteria 843
72 Ga0466959_0061612 3300045049 Bacteria 2728
73 Ga0466959_0401997 3300045049 Bacteria 931
74 Ga0466958_0061722 3300045836 Bacteria 2284
75 Ga0466958_0223311 3300045836 Bacteria 1202
76 Ga0495588_0402665 3300046674 Bacteria 718
77 Ga0495658_0113021 3300046683 Bacteria 1635
78 Ga0495613_0704185 3300046689 Bacteria 665
79 Ga0495680_0175094 3300047322 Bacteria 1552
80 Ga0496109_0447802 3300048912 Bacteria 1220
81 Ga0496110_0178948 3300048913 Bacteria 1925
82 Ga0496110_0955156 3300048913 Bacteria 764
83 Ga0496111_0058361 3300048914 Bacteria 2794
84 Ga0501036_0425656 3300049572 Bacteria 1107
85 Ga0501042_0718119 3300049578 Unclassified 727
86 nmdc:mga03n38_155267_c1 3300050490 Bacteria 1155
87 nmdc:mga03n38_9764_c1 3300050490 Bacteria 3502
88 nmdc:mga00v17_18011_c1 3300050491 Bacteria 4008
89 nmdc:mga00v17_444788_c1 3300050491 Bacteria 841
90 nmdc:mga00v17_498500_c1 3300050491 Bacteria 789
91 nmdc:mga0yw44_263693_c1 3300050492 Bacteria 1148
92 nmdc:mga0yw44_4700_c1 3300050492 Bacteria 6314
93 nmdc:mga04h51_52560_c1 3300050495 Bacteria 1372
94 nmdc:mga07m45_328935_c1 3300050496 Bacteria 888
95 nmdc:mga05p37_120197_c1 3300050507 Bacteria 3227
96 nmdc:mga05p37_520523_c1 3300050507 Bacteria 1361
97 nmdc:mga0qj67_346386_c1 3300050509 Bacteria 1201
98 nmdc:mga08y16_342436_c1 3300050511 Bacteria 1537
99 nmdc:mga08y16_767623_c1 3300050511 Bacteria 959
100 nmdc:mga0n895_503554_c1 3300050512 Bacteria 1220
101 nmdc:mga0sz30_46726_c1 3300050516 Bacteria 1828
102 Ga0501084_0652915 3300054114 Bacteria 888
103 Ga0466962_0120484 3300061719 Bacteria 1266
104 Ga0466962_0220432 3300061719 Bacteria 929
105 2899372703 2899370129 Bacteria 6781179
106 2917740506 2917736166 Bacteria 9690793
107 8003322210 8003314358 Bacteria 10575343
108 8003857063 8003856774 Bacteria 7675274
109 nmdc:mga03683_12776_c1
110 rootH1_10152747
111 JGI25407J50210_10094577
112 Ga0070668_100032575
113 Ga0070669_100163726
114 Ga0070674_100790345
115 Ga0070674_100913845
116 Ga0070667_100842154
117 Ga0070714_100014772
118 Ga0070700_100331111
119 Ga0070663_100001194
120 Ga0070706_100479879
121 Ga0070707_100177297
122 Ga0070699_100410589
123 Ga0070693_100265248
124 Ga0068864_101850813
125 Ga0068861_100945821
126 Ga0068861_101048036
127 Ga0068860_100177075
128 Ga0081538_10000499
129 Ga0075365_10010904
130 Ga0075365_10081580
131 Ga0075365_10284582
132 Ga0075368_10002621
133 Ga0075363_100006972
134 Ga0075363_100023968
135 Ga0075364_10007224
136 Ga0075364_10239488
137 Ga0075362_10009882
138 Ga0075369_10154190
139 Ga0075370_10390137
140 Ga0111539_10657071
141 Ga0111539_11099360
142 Ga0114129_10148328
143 Ga0114129_10650424
144 Ga0105239_11463147
145 Ga0157375_11746940
146 Ga0207684_10229469
147 Ga0207684_10384168
148 Ga0207684_10506639
149 Ga0207646_11117550
150 Ga0207681_10177185
151 Ga0207664_10012214
152 Ga0207668_10174404
153 Ga0207678_10000391
154 Ga0207708_10448881
155 Ga0207428_10202703
156 Ga0268264_10148843
157 Ga0307515_10129466
158 Ga0307513_10039124
159 Ga0307405_10098736
160 Ga0307413_10034680
161 Ga0307410_10325346
162 Ga0307406_10290754
163 Ga0307407_10191718
164 Ga0307412_10305343
165 Ga0307416_100014192
166 Ga0307416_101113275
167 Ga0307415_100535943
168 Ga0307507_10004437
169 Ga0307510_10043927
170 Ga0439465_0037301
171 Ga0439465_0146441
172 Ga0466972_0002175
173 Ga0466966_0107193
174 Ga0466961_0336081
175 Ga0466963_0079523
176 Ga0466963_0844948
177 Ga0466970_0078132
178 Ga0466960_0349090
179 Ga0466959_0061612
180 Ga0466959_0401997
181 Ga0466958_0061722
182 Ga0466958_0223311
183 Ga0495588_0402665
184 Ga0495658_0113021
185 Ga0495613_0704185
186 Ga0495680_0175094
187 Ga0496109_0447802
188 Ga0496110_0178948
189 Ga0496110_0955156
190 Ga0496111_0058361
191 Ga0501036_0425656
192 Ga0501042_0718119
193 nmdc:mga03n38_155267_c1
194 nmdc:mga03n38_9764_c1
195 nmdc:mga00v17_18011_c1
196 nmdc:mga00v17_444788_c1
197 nmdc:mga00v17_498500_c1
198 nmdc:mga0yw44_263693_c1
199 nmdc:mga0yw44_4700_c1
200 nmdc:mga04h51_52560_c1
201 nmdc:mga07m45_328935_c1
202 nmdc:mga05p37_120197_c1
203 nmdc:mga05p37_520523_c1
204 nmdc:mga0qj67_346386_c1
205 nmdc:mga08y16_342436_c1
206 nmdc:mga08y16_767623_c1
207 nmdc:mga0n895_503554_c1
208 nmdc:mga0sz30_46726_c1
209 Ga0501084_0652915
210 Ga0466962_0120484
211 Ga0466962_0220432
212 2899372703
213 2917740506
214 8003322210
215 8003857063

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04978

DUF664

Protein of unknown function (DUF664)

46

200

0.98

PF12867

DinB_2

DinB superfamily

50

191

0.82

PF05163

DinB

DinB family

35

197

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
2yqy-assembly2.cif.gz_B crystal structure of tt2238, a four-helix bundle protein 0.8096 11 158
2yqy-assembly1.cif.gz_A crystal structure of tt2238, a four-helix bundle protein 0.8008 11 157
2f22-assembly1.cif.gz_A crystal structure of a putative dna damage-inducable (dinb) protein (bh3987) from bacillus halodurans at 1.42 a resolution 0.8 16 165
2yqy-assembly2.cif.gz_B crystal structure of tt2238, a four-helix bundle protein 0.7804 11 158
2yqy-assembly1.cif.gz_A crystal structure of tt2238, a four-helix bundle protein 0.7719 11 157
ID Description Score Start End Superfamily
2yqyB00 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.8096 11 158 1.20.120.450
2yqyB00 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.7804 11 158 1.20.120.450
af_P71985_5_134_1.20.120.450 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.7683 18 162 1.20.120.450
af_P71985_5_134_1.20.120.450 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.7533 18 162 1.20.120.450
2ou6A00 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.7419 2 165 1.20.120.450
ID Description Score Start End GO Terms
AF-A0A5C4LYS5-F1-model_v4 DinB family protein 0.9775 1 192
AF-A0A557YII2-F1-model_v4 deleted 0.9769 1 191
AF-A0A5C4LYS5-F1-model_v4 DinB family protein 0.9725 1 192
AF-A0A557YII2-F1-model_v4 deleted 0.9669 1 191
AF-D3QA46-F1-model_v4 DinB family protein 0.9666 1 180

Map