F043522

General Info

Members Datasets Scaffolds Average Seq Length
107 61 214 159

Family's Representative Sequence

Representative Sequence 3300021388|Ga0213875_10001736|Ga0213875_1000173610
Length 170
Sequence MILNGLSARLALLRRSRTVAMVGASNKTTRPSYFVFSYLRTHRVLEVTPINPALAEIDGIKAFPTLTAYAAERGAPDIVDVFRKPSEAAAVAREAVAVGAKAIWFQYGVIDPEAIRIADEGGLDVVVDRCIKVESARFDGGLSVGGFNSGLVTARRFRPLESEPMGRHAR

Samples

Sample ID Description Type Environment
1 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
12 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
17 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
18 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
19 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
20 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
21 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
22 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
23 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
37 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
38 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
39 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
40 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
41 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
42 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
43 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
44 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
45 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
46 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
47 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
48 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
49 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
50 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
51 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
52 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
53 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
54 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
55 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
56 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
57 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
58 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
59 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
60 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
61 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane

Type Distribution

Type Percentage (%)
Metagenomes 99.07
Metatranscriptomes 0.93
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.87
Rhizosphere 80.37
Stem 0
Stem Tuber 0
Unclassified 13.08

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0213875_10001736 3300021388 Bacteria 13657
2 Ga0070683_100370546 3300005329 Bacteria 1364
3 Ga0070670_100410197 3300005331 Bacteria 1197
4 Ga0070668_101208465 3300005347 Bacteria 685
5 Ga0070709_10563458 3300005434 Bacteria 873
6 Ga0070714_100104911 3300005435 Bacteria 2494
7 Ga0070713_100846935 3300005436 Bacteria 878
8 Ga0070710_10436306 3300005437 Bacteria 885
9 Ga0070711_100080150 3300005439 Bacteria 2324
10 Ga0070681_10908936 3300005458 Unclassified 799
11 Ga0070707_100654380 3300005468 Unclassified 1013
12 Ga0068853_100074619 3300005539 Bacteria 2959
13 Ga0068853_100926854 3300005539 Bacteria 837
14 Ga0068855_100019545 3300005563 Bacteria 8138
15 Ga0068854_100000023 3300005578 Bacteria 127086
16 Ga0068856_100001167 3300005614 Bacteria 27617
17 Ga0070717_10983889 3300006028 Bacteria 768
18 Ga0157374_11526337 3300013296 Unclassified 691
19 Ga0157376_10955250 3300014969 Unclassified 878
20 Ga0206354_10427405 3300020081 Bacteria 993
21 Ga0213873_10031938 3300021358 Bacteria 1313
22 Ga0213872_10330375 3300021361 Bacteria 628
23 Ga0213872_10351327 3300021361 Unclassified 605
24 Ga0213875_10138657 3300021388 Archaea 1138
25 Ga0213871_10001681 3300021441 Bacteria 3816
26 Ga0207699_10649524 3300025906 Bacteria 770
27 Ga0207649_11143247 3300025920 Bacteria 615
28 Ga0207652_10382039 3300025921 Bacteria 1271
29 Ga0207646_10182396 3300025922 Unclassified 1896
30 Ga0207700_10459099 3300025928 Bacteria 1123
31 Ga0207700_10669091 3300025928 Bacteria 926
32 Ga0207664_10011391 3300025929 Bacteria 6319
33 Ga0207664_10389747 3300025929 Bacteria 1238
34 Ga0207664_11383551 3300025929 Bacteria 624
35 Ga0207661_10196044 3300025944 Bacteria 1773
36 Ga0207667_10003749 3300025949 Bacteria 18721
37 Ga0207640_10000233 3300025981 Bacteria 38424
38 Ga0207639_10335838 3300026041 Bacteria 1346
39 Ga0207639_10473153 3300026041 Bacteria 1141
40 Ga0207678_10053703 3300026067 Bacteria 3472
41 Ga0207702_10031358 3300026078 Bacteria 4430
42 Ga0207698_10015847 3300026142 Bacteria 5064
43 Ga0265338_10000396 3300028800 Bacteria 78090
44 Ga0265338_10239908 3300028800 Archaea 1343
45 Ga0265332_10261095 3300031238 Bacteria 716
46 Ga0265325_10002702 3300031241 Bacteria 11854
47 Ga0265325_10007239 3300031241 Bacteria 6672
48 Ga0265340_10027522 3300031247 Bacteria 2866
49 Ga0265339_10013288 3300031249 Bacteria 4995
50 Ga0265331_10300909 3300031250 Bacteria 719
51 Ga0265327_10101890 3300031251 Bacteria 1384
52 Ga0265316_10013612 3300031344 Bacteria 7218
53 Ga0265316_10180393 3300031344 Bacteria 1572
54 Ga0265313_10002107 3300031595 Bacteria 17723
55 Ga0265342_10005825 3300031712 Bacteria 9306
56 Ga0395899_0006290 3300037312 Bacteria 9192
57 Ga0395900_0007278 3300037418 Bacteria 11457
58 Ga0395898_0022498 3300037466 Bacteria 6384
59 Ga0436364_0043031 3300037853 Bacteria 2162
60 Ga0436364_0207181 3300037853 Bacteria 13657
61 Ga0436364_0295859 3300037853 Archaea 1107
62 Ga0436364_0408054 3300037853 Bacteria 951
63 Ga0436364_0907618 3300037853 Bacteria 14979
64 Ga0436364_0973407 3300037853 Bacteria 1645
65 Ga0436364_1197694 3300037853 Unclassified 1302
66 Ga0395901_0013332 3300038443 Bacteria 8350
67 Ga0436365_1250060 3300039437 Bacteria 1579
68 Ga0436365_1591737 3300039437 Bacteria 1437
69 Ga0436360_0069009 3300039438 Bacteria 599
70 Ga0436360_0129838 3300039438 Bacteria 894
71 Ga0436360_0353174 3300039438 Unclassified 620
72 Ga0436360_0488107 3300039438 Bacteria 2216
73 Ga0436360_0575760 3300039438 Bacteria 2276
74 Ga0436360_0637559 3300039438 Bacteria 13683
75 Ga0436360_0727255 3300039438 Bacteria 1270
76 Ga0436360_0730550 3300039438 Unclassified 577
77 Ga0436360_1072712 3300039438 Unclassified 545
78 Ga0436360_1158678 3300039438 Bacteria 3681
79 Ga0436360_1173788 3300039438 Eukaryota 2528
80 Ga0436361_0015904 3300039447 Bacteria 769
81 Ga0436361_0206114 3300039447 Bacteria 9384
82 Ga0436361_0676819 3300039447 Bacteria 1957
83 Ga0436361_0801218 3300039447 Eukaryota 1204
84 Ga0436361_0972305 3300039447 Bacteria 1182
85 Ga0436361_1074052 3300039447 Bacteria 1874
86 Ga0436363_0106353 3300039450 Bacteria 1653
87 Ga0436363_0222640 3300039450 Unclassified 1800
88 Ga0436363_0344567 3300039450 Bacteria 718
89 Ga0436363_0757526 3300039450 Bacteria 601
90 Ga0436363_0816471 3300039450 Bacteria 4402
91 Ga0436363_0856493 3300039450 Bacteria 712
92 Ga0436363_1354757 3300039450 Bacteria 667
93 Ga0436363_1643065 3300039450 Unclassified 579
94 Ga0436362_0025444 3300039453 Bacteria 5827
95 Ga0436362_0491232 3300039453 Bacteria 2091
96 Ga0436362_0648278 3300039453 Bacteria 605
97 Ga0436362_0746139 3300039453 Bacteria 1223
98 Ga0436362_0924874 3300039453 Unclassified 2153
99 Ga0436362_0954139 3300039453 Bacteria 672
100 Ga0436362_0961248 3300039453 Bacteria 1971
101 Ga0436362_1231765 3300039453 Bacteria 1154
102 Ga0451793_1779609 3300041452 Bacteria 826
103 Ga0466961_0243382 3300044693 Unclassified 1105
104 Ga0466963_0598576 3300044694 Bacteria 779
105 Ga0466959_0272908 3300045049 Bacteria 1162
106 Ga0466958_0014217 3300045836 Bacteria 4544
107 Ga0496115_0270631 3300048918 Bacteria 1396
108 Ga0213875_10001736
109 Ga0070683_100370546
110 Ga0070670_100410197
111 Ga0070668_101208465
112 Ga0070709_10563458
113 Ga0070714_100104911
114 Ga0070713_100846935
115 Ga0070710_10436306
116 Ga0070711_100080150
117 Ga0070681_10908936
118 Ga0070707_100654380
119 Ga0068853_100074619
120 Ga0068853_100926854
121 Ga0068855_100019545
122 Ga0068854_100000023
123 Ga0068856_100001167
124 Ga0070717_10983889
125 Ga0157374_11526337
126 Ga0157376_10955250
127 Ga0206354_10427405
128 Ga0213873_10031938
129 Ga0213872_10330375
130 Ga0213872_10351327
131 Ga0213875_10138657
132 Ga0213871_10001681
133 Ga0207699_10649524
134 Ga0207649_11143247
135 Ga0207652_10382039
136 Ga0207646_10182396
137 Ga0207700_10459099
138 Ga0207700_10669091
139 Ga0207664_10011391
140 Ga0207664_10389747
141 Ga0207664_11383551
142 Ga0207661_10196044
143 Ga0207667_10003749
144 Ga0207640_10000233
145 Ga0207639_10335838
146 Ga0207639_10473153
147 Ga0207678_10053703
148 Ga0207702_10031358
149 Ga0207698_10015847
150 Ga0265338_10000396
151 Ga0265338_10239908
152 Ga0265332_10261095
153 Ga0265325_10002702
154 Ga0265325_10007239
155 Ga0265340_10027522
156 Ga0265339_10013288
157 Ga0265331_10300909
158 Ga0265327_10101890
159 Ga0265316_10013612
160 Ga0265316_10180393
161 Ga0265313_10002107
162 Ga0265342_10005825
163 Ga0395899_0006290
164 Ga0395900_0007278
165 Ga0395898_0022498
166 Ga0436364_0043031
167 Ga0436364_0207181
168 Ga0436364_0295859
169 Ga0436364_0408054
170 Ga0436364_0907618
171 Ga0436364_0973407
172 Ga0436364_1197694
173 Ga0395901_0013332
174 Ga0436365_1250060
175 Ga0436365_1591737
176 Ga0436360_0069009
177 Ga0436360_0129838
178 Ga0436360_0353174
179 Ga0436360_0488107
180 Ga0436360_0575760
181 Ga0436360_0637559
182 Ga0436360_0727255
183 Ga0436360_0730550
184 Ga0436360_1072712
185 Ga0436360_1158678
186 Ga0436360_1173788
187 Ga0436361_0015904
188 Ga0436361_0206114
189 Ga0436361_0676819
190 Ga0436361_0801218
191 Ga0436361_0972305
192 Ga0436361_1074052
193 Ga0436363_0106353
194 Ga0436363_0222640
195 Ga0436363_0344567
196 Ga0436363_0757526
197 Ga0436363_0816471
198 Ga0436363_0856493
199 Ga0436363_1354757
200 Ga0436363_1643065
201 Ga0436362_0025444
202 Ga0436362_0491232
203 Ga0436362_0648278
204 Ga0436362_0746139
205 Ga0436362_0924874
206 Ga0436362_0954139
207 Ga0436362_0961248
208 Ga0436362_1231765
209 Ga0451793_1779609
210 Ga0466961_0243382
211 Ga0466963_0598576
212 Ga0466959_0272908
213 Ga0466958_0014217
214 Ga0496115_0270631

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13380

CoA_binding_2

CoA binding domain

17

136

0.97

PF02629

CoA_binding

CoA binding domain

14

106

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
2d5a-assembly1.cif.gz_A hypothetical protein from pyrococcus horikoshii ot3 0.9553 5 137
3q9n-assembly1.cif.gz_A in silico and in vitro co-evolution of a high affinity complementary protein-protein interface 0.9514 5 140
1y81-assembly1.cif.gz_A conserved hypothetical protein pfu-723267-001 from pyrococcus furiosus 0.9367 17 134
3q9u-assembly2.cif.gz_B in silico and in vitro co-evolution of a high affinity complementary protein-protein interface 0.9364 5 137
3q9n-assembly2.cif.gz_B in silico and in vitro co-evolution of a high affinity complementary protein-protein interface 0.9349 5 140
ID Description Score Start End Superfamily
3q9nB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9349 5 140 3.40.50.720
1y81A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9348 17 131 3.40.50.720
1iulA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9279 5 137 3.40.50.720
1iulA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9016 5 137 3.40.50.720
1y81A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8964 17 131 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A249KQE0-F1-model_v4 deleted 0.9863 2 138
AF-R4V0Y9-F1-model_v4 deleted 0.9863 5 137
AF-A0A829QJM4-F1-model_v4 CoA-binding domain-containing protein 0.9856 5 137
AF-A0A840LMR1-F1-model_v4 deleted 0.9841 5 140
AF-A0A849AG91-F1-model_v4 CoA-binding protein 0.9827 5 137

Map