F032612

General Info

Members Datasets Scaffolds Average Seq Length
105 68 105 919

Family's Representative Sequence

Representative Sequence 3300025936|Ga0207670_10001633|Ga0207670_1000163310
Length 1077
Sequence MKSLSADSLFARLLAKLARTVLRREGWFIYPQVVLFVLSILLTVRYLEFDTSRNNLVGPNKKYHQNFLEFKKEFPTQDDLVVVVESEDAEKNRQLVERLAPKLEAETNLFTHIFFKGDLKMLGAKALLFVPDESPPTISAAHIKDLASLSAKLRQPADAVSSFLHSRLSAATRQALTNYQVSTGDPISLLGTLTNDLNGILGGQLIFEPQRFSGITLRAKTQRLLTENPDGKKLAHLNRLLLEDAYPQEISRSDLDELLRTLRDFRPFIEQFTRTTNLVTFFDMVNWQIGHATREKNAQTDSMIKALPALERIVLEATTCLNRPGVPPSPGVTALFDAGEEAQQQQYITFDHGRIYLLTAQAPRPRVPKAEVVETSFASRLWKILRYERKAAEENLNNKAVERLRQLVEETRTEVPGVNVGLTGEPVLEHDEMLQSQKDTTIASIVSLVLSALIFIYGYQETGRPVKATVCLLVGLAYTFAFATLTIGHLNILTITFLPMLIGLAIDFGVHLVTRYEEELRHGRSEVEALTKAMVFTGQGIFTGALTTAGAFLAMSFTNFKGIQEMGVICGGGLAICLVPMMTMLPALLLRGRQNVIDHQLGDKLETRARIERMWLRRPVFVMVMTVLFCALAATQYPKVYFDYNLLNMQSDGLPAVEFERKLISASSSTNASARSVLFAAVVADSPEEAAGFEVRLKQLPAVAAVDSISQFINENQTGKLGLIGEIKQELSTLRFREPDARPVKVPELSRTLYSLHGYLGLALDEVPQDEASLRKQLISLRQAIWGLRKEMLRLSQYREDASAEKLAAFQRALFDDVRDTFEALRNQDNREPLRVEDLPPALRDRFVGVSGKYLLQVYPKKDAWQRENQREFIHELRQALDPKDTNHPIITGTPVQLYEYTTLLKNSYQEAAKYSLAAIAVLVFLHFRSLGSVILALLPVAIGSIWLGGLMGLCDVPLNPANIMTLPLVIGIGVTNGIHILNRFAEEREPSILAKSTGKAVLVSGLTTIAGFGSLILAKHQGIQSLGILMATGTATCMIAGLTFLPALLNLLMPRRGKEQPSADNAQSTLGREEPR

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
3 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
4 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
5 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
6 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
7 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
8 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
9 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
10 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
11 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
12 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
13 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
14 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
15 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
16 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
17 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
18 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
23 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
25 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
26 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
27 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
28 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
29 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
30 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
31 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
32 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
33 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
34 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
35 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
36 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
37 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
38 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
39 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
40 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
41 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
42 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
43 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
44 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
45 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
46 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
47 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
48 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
49 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
50 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
51 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
52 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
53 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
54 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
55 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
56 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
57 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
58 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
59 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
60 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
61 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
62 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
63 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
64 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
65 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
66 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
67 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
68 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 99.05
Stem 0
Stem Tuber 0
Unclassified 0.95

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10026230 3300003320 Bacteria 24584
2 Ga0070681_10065141 3300005458 Unclassified 3613
3 Ga0070679_100032668 3300005530 Bacteria 5149
4 Ga0070686_100024710 3300005544 Unclassified 3604
5 Ga0068855_100045886 3300005563 Bacteria 5166
6 Ga0068855_100131805 3300005563 Unclassified 2854
7 Ga0068857_100023719 3300005577 Bacteria 5401
8 Ga0068856_100000017 3300005614 Bacteria 154589
9 Ga0068856_100025987 3300005614 Bacteria 5710
10 Ga0068859_100001579 3300005617 Bacteria 23225
11 Ga0068871_100004429 3300006358 Bacteria 9768
12 Ga0075428_100004561 3300006844 Bacteria 15316
13 Ga0097620_100001579 3300006931 Bacteria 23225
14 Ga0105240_10001027 3300009093 Bacteria 49580
15 Ga0105240_10011727 3300009093 Bacteria 12176
16 Ga0105240_10015951 3300009093 Bacteria 10189
17 Ga0111539_10073346 3300009094 Unclassified 4036
18 Ga0105242_10008365 3300009176 Bacteria 7948
19 Ga0105238_10018503 3300009551 Bacteria 7089
20 Ga0105238_10020005 3300009551 Bacteria 6814
21 Ga0157375_10000072 3300013308 Bacteria 106823
22 Ga0163163_10032073 3300014325 Bacteria 5075
23 Ga0163163_10061405 3300014325 Bacteria 3724
24 Ga0207695_10005918 3300025913 Bacteria 16028
25 Ga0207695_10007536 3300025913 Bacteria 13797
26 Ga0207652_10044306 3300025921 Bacteria 3790
27 Ga0207694_10013996 3300025924 Bacteria 6049
28 Ga0207670_10001633 3300025936 Bacteria 11701
29 Ga0207670_10019012 3300025936 Unclassified 4187
30 Ga0207702_10003903 3300026078 Bacteria 13421
31 Ga0207674_10033240 3300026116 Bacteria 5401
32 Ga0265337_1000313 3300028556 Bacteria 25839
33 Ga0265337_1002338 3300028556 Bacteria 8783
34 Ga0265337_1004093 3300028556 Bacteria 6130
35 Ga0265319_1000003 3300028563 Bacteria 340561
36 Ga0265334_10010976 3300028573 Unclassified 3821
37 Ga0265318_10012846 3300028577 Unclassified 3552
38 Ga0265323_10000852 3300028653 Bacteria 16223
39 Ga0265322_10002305 3300028654 Bacteria 5919
40 Ga0265336_10001367 3300028666 Bacteria 11251
41 Ga0265338_10000433 3300028800 Bacteria 75181
42 Ga0265338_10001568 3300028800 Bacteria 36872
43 Ga0265338_10002121 3300028800 Bacteria 30468
44 Ga0265338_10003767 3300028800 Bacteria 21069
45 Ga0265338_10004710 3300028800 Bacteria 18257
46 Ga0265338_10005872 3300028800 Bacteria 15830
47 Ga0265338_10009147 3300028800 Bacteria 11889
48 Ga0265338_10012878 3300028800 Bacteria 9503
49 Ga0265338_10022461 3300028800 Bacteria 6531
50 Ga0265338_10024490 3300028800 Bacteria 6164
51 Ga0265338_10040915 3300028800 Bacteria 4344
52 Ga0265324_10000058 3300029957 Bacteria 93345
53 Ga0265320_10000393 3300031240 Bacteria 35365
54 Ga0265320_10004859 3300031240 Bacteria 8729
55 Ga0265320_10015489 3300031240 Bacteria 4309
56 Ga0265325_10020661 3300031241 Bacteria 3627
57 Ga0265329_10000651 3300031242 Bacteria 17748
58 Ga0265340_10005086 3300031247 Bacteria 7316
59 Ga0265340_10007476 3300031247 Bacteria 5931
60 Ga0265327_10005123 3300031251 Bacteria 11128
61 Ga0265327_10008404 3300031251 Bacteria 7696
62 Ga0265316_10003242 3300031344 Bacteria 16524
63 Ga0265316_10008230 3300031344 Bacteria 9706
64 Ga0265313_10001728 3300031595 Bacteria 20106
65 Ga0265313_10003751 3300031595 Bacteria 12076
66 Ga0265314_10000435 3300031711 Bacteria 55753
67 Ga0265314_10038168 3300031711 Bacteria 3474
68 Ga0373926_0005136 3300035083 Bacteria 4305
69 Ga0373928_0000208 3300035084 Bacteria 11323
70 Ga0373932_0000001 3300035112 Bacteria 1459067
71 Ga0373962_0000036 3300035242 Bacteria 33304
72 Ga0373931_0000002 3300035691 Bacteria 599830
73 Ga0373935_0001937 3300035692 Bacteria 11638
74 Ga0373927_0006421 3300035695 Bacteria 8013
75 Ga0373925_0002767 3300037068 Bacteria 13862
76 Ga0373925_0009913 3300037068 Bacteria 6920
77 Ga0373925_0013583 3300037068 Bacteria 5895
78 Ga0451577_0004273 3300042876 Bacteria 15190
79 Ga0451577_0010229 3300042876 Bacteria 8985
80 Ga0453684_0001984 3300044712 Bacteria 52481
81 Ga0453684_0004775 3300044712 Bacteria 27950
82 Ga0453684_0022258 3300044712 Bacteria 9416
83 Ga0451576_0027122 3300045051 Bacteria 6156
84 Ga0495592_0000138 3300046454 Bacteria 63936
85 Ga0495618_0001148 3300046514 Bacteria 17948
86 Ga0495628_0000559 3300046516 Bacteria 34273
87 Ga0495630_0000043 3300046517 Bacteria 104062
88 Ga0495630_0026454 3300046517 Bacteria 4295
89 Ga0495586_0000077 3300046535 Bacteria 60087
90 Ga0495586_0001259 3300046535 Bacteria 14214
91 Ga0495586_0001532 3300046535 Bacteria 12749
92 Ga0495634_0005467 3300046642 Bacteria 9770
93 Ga0495599_0002844 3300046678 Bacteria 10082
94 Ga0495658_0005544 3300046683 Bacteria 6205
95 Ga0495613_0001848 3300046689 Bacteria 16109
96 Ga0495674_0003120 3300047319 Bacteria 16101
97 Ga0495680_0023873 3300047322 Bacteria 5081
98 Ga0501031_0000282 3300049568 Bacteria 28806
99 Ga0501031_0003489 3300049568 Bacteria 10093
100 Ga0501032_0012999 3300049569 Bacteria 5929
101 Ga0501033_0004318 3300049570 Bacteria 11410
102 Ga0501035_0004568 3300049822 Bacteria 13126
103 Ga0501044_0000442 3300049823 Bacteria 50741
104 Ga0501044_0012126 3300049823 Bacteria 9333
105 nmdc:mga08y16_10103_c1 3300050511 Bacteria 9907

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300028800 Ga0265338_10005872 Ga0265338_100058724 812
2 3300005614 Ga0068856_100000017 Ga0068856_10000001783 818
3 3300026078 Ga0207702_10003903 Ga0207702_100039039 818
4 3300025936 Ga0207670_10019012 Ga0207670_100190122 827
5 3300044712 Ga0453684_0004775 Ga0453684_0004775_22151_24946 828
6 3300045051 Ga0451576_0027122 Ga0451576_0027122_3095_5890 828
7 3300028563 Ga0265319_1000003 Ga0265319_1000003122 829
8 3300031595 Ga0265313_10001728 Ga0265313_1000172817 829
9 3300006358 Ga0068871_100004429 Ga0068871_1000044294 831
10 3300042876 Ga0451577_0004273 Ga0451577_0004273_1800_4580 838
11 3300044712 Ga0453684_0022258 Ga0453684_0022258_4866_7646 838
12 3300009093 Ga0105240_10011727 Ga0105240_100117279 841
13 3300025913 Ga0207695_10005918 Ga0207695_100059185 841
14 3300005563 Ga0068855_100045886 Ga0068855_1000458863 844
15 3300005563 Ga0068855_100131805 Ga0068855_1001318051 844
16 3300009551 Ga0105238_10020005 Ga0105238_100200052 844
17 3300028800 Ga0265338_10009147 Ga0265338_100091475 844
18 3300046683 Ga0495658_0005544 Ga0495658_0005544_364_3087 846
19 3300005458 Ga0070681_10065141 Ga0070681_100651412 847
20 3300005530 Ga0070679_100032668 Ga0070679_1000326682 847
21 3300009093 Ga0105240_10015951 Ga0105240_100159512 847
22 3300025921 Ga0207652_10044306 Ga0207652_100443062 847
23 3300035083 Ga0373926_0005136 Ga0373926_0005136_157_2940 847
24 3300035692 Ga0373935_0001937 Ga0373935_0001937_6799_9582 847
25 3300035695 Ga0373927_0006421 Ga0373927_0006421_3444_6227 847
26 3300037068 Ga0373925_0009913 Ga0373925_0009913_2341_5124 847
27 3300005544 Ga0070686_100024710 Ga0070686_1000247102 849
28 3300013308 Ga0157375_10000072 Ga0157375_1000007222 849
29 3300046517 Ga0495630_0000043 Ga0495630_0000043_89437_92229 849
30 3300046535 Ga0495586_0000077 Ga0495586_0000077_11850_14642 849
31 3300047319 Ga0495674_0003120 Ga0495674_0003120_1440_4232 849
32 3300031242 Ga0265329_10000651 Ga0265329_100006519 851
33 3300031711 Ga0265314_10000435 Ga0265314_1000043527 851
34 3300037068 Ga0373925_0013583 Ga0373925_0013583_3143_5869 851
35 3300046517 Ga0495630_0026454 Ga0495630_0026454_336_3062 851
36 3300035084 Ga0373928_0000208 Ga0373928_0000208_4776_7547 857
37 3300035112 Ga0373932_0000001 Ga0373932_0000001_1436760_1439531 857
38 3300035242 Ga0373962_0000036 Ga0373962_0000036_2902_5673 857
39 3300035691 Ga0373931_0000002 Ga0373931_0000002_55867_58638 857
40 3300037068 Ga0373925_0002767 Ga0373925_0002767_3460_6231 857
41 3300042876 Ga0451577_0010229 Ga0451577_0010229_392_3208 857
42 3300044712 Ga0453684_0001984 Ga0453684_0001984_49384_52218 857
43 3300046454 Ga0495592_0000138 Ga0495592_0000138_21231_23978 857
44 3300046516 Ga0495628_0000559 Ga0495628_0000559_24589_27336 857
45 3300046535 Ga0495586_0001259 Ga0495586_0001259_10675_13422 857
46 3300046678 Ga0495599_0002844 Ga0495599_0002844_5406_8153 857
47 3300031240 Ga0265320_10000393 Ga0265320_1000039326 858
48 3300028800 Ga0265338_10004710 Ga0265338_100047104 859
49 3300028800 Ga0265338_10040915 Ga0265338_100409152 859
50 3300005577 Ga0068857_100023719 Ga0068857_1000237193 860
51 3300009094 Ga0111539_10073346 Ga0111539_100733462 860
52 3300026116 Ga0207674_10033240 Ga0207674_100332402 860
53 3300009093 Ga0105240_10001027 Ga0105240_100010277 861
54 3300014325 Ga0163163_10061405 Ga0163163_100614052 861
55 3300025913 Ga0207695_10007536 Ga0207695_100075364 861
56 3300005617 Ga0068859_100001579 Ga0068859_1000015798 862
57 3300006931 Ga0097620_100001579 Ga0097620_1000015798 862
58 3300009176 Ga0105242_10008365 Ga0105242_100083656 862
59 3300009551 Ga0105238_10018503 Ga0105238_100185033 862
60 3300014325 Ga0163163_10032073 Ga0163163_100320732 862
61 3300025924 Ga0207694_10013996 Ga0207694_100139965 862
62 3300025936 Ga0207670_10001633 Ga0207670_1000163310 862
63 3300028577 Ga0265318_10012846 Ga0265318_100128462 862
64 3300028800 Ga0265338_10002121 Ga0265338_1000212118 862
65 3300031247 Ga0265340_10005086 Ga0265340_100050866 862
66 3300006844 Ga0075428_100004561 Ga0075428_10000456111 863
67 3300028556 Ga0265337_1000313 Ga0265337_100031319 863
68 3300028556 Ga0265337_1002338 Ga0265337_10023387 863
69 3300028666 Ga0265336_10001367 Ga0265336_100013678 863
70 3300031240 Ga0265320_10004859 Ga0265320_100048591 863
71 3300031240 Ga0265320_10015489 Ga0265320_100154892 863
72 3300031251 Ga0265327_10008404 Ga0265327_100084044 863
73 3300031711 Ga0265314_10038168 Ga0265314_100381682 863
74 3300049568 Ga0501031_0003489 Ga0501031_0003489_2206_4977 863
75 3300049822 Ga0501035_0004568 Ga0501035_0004568_8646_11417 863
76 3300049823 Ga0501044_0012126 Ga0501044_0012126_1807_4578 863
77 3300050511 nmdc:mga08y16_10103_c1 nmdc:mga08y16_10103_c1_172_2952 863
78 3300028653 Ga0265323_10000852 Ga0265323_1000085214 864
79 3300028654 Ga0265322_10002305 Ga0265322_100023052 864
80 3300028800 Ga0265338_10022461 Ga0265338_100224615 864
81 3300049568 Ga0501031_0000282 Ga0501031_0000282_13545_16322 864
82 3300049569 Ga0501032_0012999 Ga0501032_0012999_1522_4299 864
83 3300049570 Ga0501033_0004318 Ga0501033_0004318_7882_10659 864
84 3300049823 Ga0501044_0000442 Ga0501044_0000442_14023_16800 864
85 3300031251 Ga0265327_10005123 Ga0265327_100051235 865
86 3300029957 Ga0265324_10000058 Ga0265324_1000005839 868
87 3300028800 Ga0265338_10000433 Ga0265338_1000043339 869
88 3300046514 Ga0495618_0001148 Ga0495618_0001148_10431_13214 870
89 3300046535 Ga0495586_0001532 Ga0495586_0001532_3816_6599 870
90 3300046642 Ga0495634_0005467 Ga0495634_0005467_4027_6810 870
91 3300046689 Ga0495613_0001848 Ga0495613_0001848_10322_13105 870
92 3300047322 Ga0495680_0023873 Ga0495680_0023873_17_2800 870
93 3300005614 Ga0068856_100025987 Ga0068856_1000259876 872
94 3300031247 Ga0265340_10007476 Ga0265340_100074763 872
95 3300028556 Ga0265337_1004093 Ga0265337_10040933 874
96 3300028573 Ga0265334_10010976 Ga0265334_100109762 874
97 3300028800 Ga0265338_10001568 Ga0265338_100015689 874
98 3300028800 Ga0265338_10003767 Ga0265338_100037679 874
99 3300028800 Ga0265338_10012878 Ga0265338_100128782 874
100 3300028800 Ga0265338_10024490 Ga0265338_100244904 874
101 3300031241 Ga0265325_10020661 Ga0265325_100206612 874
102 3300031344 Ga0265316_10003242 Ga0265316_100032429 874
103 3300031344 Ga0265316_10008230 Ga0265316_100082303 874
104 3300031595 Ga0265313_10003751 Ga0265313_100037517 874
105 3300003320 rootH2_10026230 rootH2_1002623016 879

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03176

MMPL

MMPL family

793

1071

0.81

PF03176

MMPL

MMPL family

379

625

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
5khn-assembly1.cif.gz_A crystal structures of the burkholderia multivorans hopanoid transporter hpnn 0.7627 5 837
5khs-assembly1.cif.gz_B crystal structures of the burkholderia multivorans hopanoid transporter hpnn 0.7566 5 837
5khn-assembly1.cif.gz_B crystal structures of the burkholderia multivorans hopanoid transporter hpnn 0.7534 5 836
6wu0-assembly1.cif.gz_B cryoem structure of burkholderia pseudomallei hopanoid biosynthesis-associated rnd transporter hpnn 0.7436 7 837
6n40-assembly1.cif.gz_A crystal structure of mmpl3 from mycobacterium smegmatis 0.7295 10 840
ID Description Score Start End Superfamily
af_P9WJU1_134_330_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.9287 222 393 1.20.1640.10
af_Q58957_173_376_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.9276 194 391 1.20.1640.10
af_Q2FXT8_201_397_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.9015 235 392 1.20.1640.10
af_P9WJV9_185_352_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.9004 235 392 1.20.1640.10
af_Q58957_173_376_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.8933 194 391 1.20.1640.10
ID Description Score Start End GO Terms
AF-X1RQ93-F1-model_v4 SSD domain-containing protein 0.9162 254 392 GO:0005886
AF-A0A351KSU8-F1-model_v4 Membrane transport protein MMPL domain-containing protein 0.9103 626 851 GO:0005886
AF-A0A7R9AHN5-F1-model_v4 Protein translocase subunit SecD 0.9059 235 392 GO:0005886
GO:0006886
GO:0015450
AF-S7VDE4-F1-model_v4 RND efflux system, inner membrane transporter CmeB 0.8815 229 392 GO:0005886
GO:0042910
AF-A0A3A0G3J1-F1-model_v4 SSD domain-containing protein 0.8813 246 398 GO:0005886

Feature Viewer

pLDDT pTM Quality
80.69 0.73 High
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Predicted Structure (AlphaFold2)

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