F032355
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 105 | 90 | 98 | 269 |
Family's Representative Sequence
| Representative Sequence | 3300015261|Ga0182006_1000250|Ga0182006_100025028 |
| Length | 280 |
| Sequence | MPAKNPKTSSRSPSGSDDKKNRYETIIEHIFVQHYQAGITEFEFEREEIRKAADILSIKVPDNIGDLPYTFRYRRDLPRAIRETADAGKEWIIQGVGRSKYQFKQVTLNRIVPREELVTIKVPDATPEIIGAYALGDEQALLAKVRYNRLVDIFLGITAYSLQNHLRTTVKGIGQIEIDEIYVGIDRNGRQFVVPVQAKGGNDKHGVVQTQQDIACCRQKFKSLICRPLSAQFMSNGRIAMFELTVEEDEVKIVDEKHYQLVPANNISDEDLLNYKVRGE |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2643221609 | Acidovorax sp. Root217 | Isolate | Unclassified |
| 2 | 2643221645 | Massilia sp. Root351 | Isolate | Unclassified |
| 3 | 2854681122 | Luteovulum sphaeroides SCJ | Isolate | Unclassified |
| 4 | 2896184354 | Aurantiacibacter suaedae GH3-15 | Isolate | Rhizosphere |
| 5 | 2978969890 | Agrobacterium sp. SORGH_AS 787 | Isolate | Unclassified |
| 6 | 2989392574 | Methylomonas rhizoryzae GJ1 | Isolate | Unclassified |
| 7 | 3300000546 | Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled | Metagenome | Rhizosphere |
| 8 | 3300001979 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 | Metagenome | Rhizosphere |
| 9 | 3300002704 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB | Metagenome | Unclassified |
| 10 | 3300002705 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS | Metagenome | Unclassified |
| 11 | 3300002738 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA | Metagenome | Unclassified |
| 12 | 3300002741 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL | Metagenome | Unclassified |
| 13 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 14 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 15 | 3300003775 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 | Metagenome | Endosphere |
| 16 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 19 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 20 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 22 | 3300006177 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 | Metagenome | Endosphere |
| 23 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 24 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 25 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 26 | 3300009979 | Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG | Metagenome | Rhizosphere |
| 27 | 3300012513 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510 | Metagenome | Rhizosphere |
| 28 | 3300015261 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG | Metagenome | Rhizosphere |
| 29 | 3300015689 | Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A02 | Metagenome | Rhizosphere |
| 30 | 3300025206 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) | Metagenome | Unclassified |
| 31 | 3300025246 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) | Metagenome | Unclassified |
| 32 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 33 | 3300025256 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) | Metagenome | Unclassified |
| 34 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 35 | 3300025299 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 36 | 3300025728 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300028563 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG | Metagenome | Rhizosphere |
| 43 | 3300028577 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG | Metagenome | Rhizosphere |
| 44 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 45 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 46 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 47 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 48 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 49 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 50 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 51 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 52 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 53 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 54 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 55 | 3300046458 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere | Metagenome | Rhizosphere |
| 56 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 57 | 3300046474 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere | Metagenome | Rhizosphere |
| 58 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 59 | 3300046501 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere | Metagenome | Rhizosphere |
| 60 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 61 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 62 | 3300046530 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere | Metagenome | Rhizosphere |
| 63 | 3300046542 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere | Metagenome | Rhizosphere |
| 64 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 65 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 66 | 3300047470 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere | Metagenome | Rhizosphere |
| 67 | 3300048091 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere | Metagenome | Rhizosphere |
| 68 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 69 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 70 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 71 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 72 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 73 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 74 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 75 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 76 | 3300049459 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere | Metagenome | Rhizosphere |
| 77 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 78 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 79 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 80 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 81 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 82 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 83 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 84 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 85 | 3300050489 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation | Metagenome | Endosphere |
| 86 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 87 | 3300053125 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere | Metagenome | Endosphere |
| 88 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 89 | 3300053730 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere | Metagenome | Endosphere |
| 90 | 8005246636 | Rhizobium wuzhouense W44 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 93.33 |
| Metatranscriptomes | 0 |
| Isolates | 6.67 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 10.48 |
| Nodule | 0 |
| Rhizoplane | 0 |
| Rhizosphere | 64.76 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 24.76 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | LJNas_1002507 | 3300000546 | Viruses | 2205 |
| 2 | JGI24740J21852_10001923 | 3300001979 | Bacteria | 9514 |
| 3 | JGI25155J39150_1000014 | 3300002704 | Bacteria | 196159 |
| 4 | JGI25156J39149_1000083 | 3300002705 | Bacteria | 70138 |
| 5 | JGI25154J39366_1000139 | 3300002738 | Bacteria | 56829 |
| 6 | JGI25157J39369_1000110 | 3300002741 | Bacteria | 69643 |
| 7 | rootH2_10047187 | 3300003320 | Bacteria | 16652 |
| 8 | rootH2_10184168 | 3300003320 | Unclassified | 1461 |
| 9 | rootH1_10038810 | 3300003323 | Bacteria | 13711 |
| 10 | Ga0055524_1004545 | 3300003775 | Bacteria | 6386 |
| 11 | Ga0055524_1005072 | 3300003775 | Bacteria | 5957 |
| 12 | Ga0070658_10032983 | 3300005327 | Bacteria | 4164 |
| 13 | Ga0070669_100004863 | 3300005353 | Bacteria | 9695 |
| 14 | Ga0070681_10365823 | 3300005458 | Bacteria | 1352 |
| 15 | Ga0070706_100209565 | 3300005467 | Bacteria | 1820 |
| 16 | Ga0070696_100007814 | 3300005546 | Bacteria | 7140 |
| 17 | Ga0068855_100118361 | 3300005563 | Bacteria | 3034 |
| 18 | Ga0075362_10010102 | 3300006177 | Bacteria | 3675 |
| 19 | Ga0105244_10003807 | 3300009036 | Bacteria | 10641 |
| 20 | Ga0105240_10001055 | 3300009093 | Bacteria | 48787 |
| 21 | Ga0105240_10107363 | 3300009093 | Bacteria | 3385 |
| 22 | Ga0105242_10444744 | 3300009176 | Bacteria | 1220 |
| 23 | Ga0105032_100069 | 3300009979 | Bacteria | 11670 |
| 24 | Ga0157326_1007914 | 3300012513 | Unclassified | 1153 |
| 25 | Ga0182006_1000250 | 3300015261 | Bacteria | 50197 |
| 26 | Ga0183360_10002 | 3300015689 | Bacteria | 953821 |
| 27 | Ga0209435_100027 | 3300025206 | Bacteria | 196217 |
| 28 | Ga0209646_1000086 | 3300025246 | Bacteria | 196217 |
| 29 | Ga0209026_1000082 | 3300025250 | Bacteria | 196315 |
| 30 | Ga0209759_1000063 | 3300025256 | Bacteria | 196315 |
| 31 | Ga0209673_1040670 | 3300025273 | Viruses | 1328 |
| 32 | Ga0209256_1000784 | 3300025299 | Bacteria | 40988 |
| 33 | Ga0209256_1001155 | 3300025299 | Bacteria | 29900 |
| 34 | Ga0207655_1001336 | 3300025728 | Bacteria | 23242 |
| 35 | Ga0207705_10027096 | 3300025909 | Bacteria | 4085 |
| 36 | Ga0207707_10235909 | 3300025912 | Bacteria | 1591 |
| 37 | Ga0207695_10003207 | 3300025913 | Bacteria | 23305 |
| 38 | Ga0207695_10277501 | 3300025913 | Unclassified | 1570 |
| 39 | Ga0207681_10003555 | 3300025923 | Bacteria | 9706 |
| 40 | Ga0207667_10052748 | 3300025949 | Bacteria | 4281 |
| 41 | Ga0265319_1005406 | 3300028563 | Bacteria | 6112 |
| 42 | Ga0265319_1024190 | 3300028563 | Bacteria | 2189 |
| 43 | Ga0265318_10011909 | 3300028577 | Bacteria | 3720 |
| 44 | Ga0265338_10015641 | 3300028800 | Bacteria | 8314 |
| 45 | Ga0265338_10063066 | 3300028800 | Bacteria | 3234 |
| 46 | Ga0265320_10002343 | 3300031240 | Bacteria | 13273 |
| 47 | Ga0265314_10039966 | 3300031711 | Bacteria | 3372 |
| 48 | Ga0265314_10168539 | 3300031711 | Unclassified | 1324 |
| 49 | Ga0307412_10022082 | 3300031911 | Bacteria | 3895 |
| 50 | Ga0307416_100016362 | 3300032002 | Bacteria | 5153 |
| 51 | Ga0373935_0012072 | 3300035692 | Bacteria | 5192 |
| 52 | Ga0395905_0068650 | 3300037471 | Unclassified | 3320 |
| 53 | Ga0453683_0122150 | 3300044673 | Bacteria | 1640 |
| 54 | Ga0466965_0069919 | 3300044683 | Bacteria | 1764 |
| 55 | Ga0466963_0046509 | 3300044694 | Bacteria | 2862 |
| 56 | Ga0451576_0018643 | 3300045051 | Bacteria | 7593 |
| 57 | Ga0495591_014446 | 3300046458 | Bacteria | 2838 |
| 58 | Ga0495650_0000749 | 3300046471 | Bacteria | 40585 |
| 59 | Ga0495605_0019384 | 3300046474 | Bacteria | 3633 |
| 60 | Ga0495585_0002166 | 3300046492 | Bacteria | 14280 |
| 61 | Ga0495607_0000475 | 3300046501 | Bacteria | 40108 |
| 62 | Ga0495610_0042676 | 3300046512 | Unclassified | 2266 |
| 63 | Ga0495643_0000002 | 3300046522 | Bacteria | 1131278 |
| 64 | Ga0495643_0000060 | 3300046522 | Bacteria | 190075 |
| 65 | Ga0495643_0018881 | 3300046522 | Bacteria | 3994 |
| 66 | Ga0495654_0001038 | 3300046530 | Bacteria | 20317 |
| 67 | Ga0495597_0029605 | 3300046542 | Bacteria | 2499 |
| 68 | Ga0495625_0014770 | 3300046660 | Bacteria | 6216 |
| 69 | Ga0495649_0003067 | 3300046694 | Bacteria | 11433 |
| 70 | Ga0495681_0000004 | 3300047470 | Bacteria | 241909 |
| 71 | Ga0495626_0000001 | 3300048091 | Bacteria | 1077129 |
| 72 | Ga0496116_0003701 | 3300048919 | Bacteria | 14960 |
| 73 | Ga0496117_0000091 | 3300048920 | Bacteria | 203826 |
| 74 | Ga0496117_0005048 | 3300048920 | Bacteria | 14148 |
| 75 | Ga0496117_0090041 | 3300048920 | Bacteria | 1979 |
| 76 | Ga0496118_0001201 | 3300048921 | Bacteria | 39864 |
| 77 | Ga0496121_0026396 | 3300048924 | Bacteria | 5476 |
| 78 | Ga0496122_0004070 | 3300048925 | Bacteria | 18554 |
| 79 | Ga0496123_0001859 | 3300048926 | Bacteria | 27720 |
| 80 | Ga0496124_0413512 | 3300048927 | Unclassified | 932 |
| 81 | Ga0496125_0003404 | 3300048928 | Bacteria | 19333 |
| 82 | Ga0495678_000869 | 3300049459 | Bacteria | 26902 |
| 83 | Ga0495678_014281 | 3300049459 | Unclassified | 3698 |
| 84 | Ga0501032_0000944 | 3300049569 | Bacteria | 23507 |
| 85 | Ga0501046_0071642 | 3300049580 | Unclassified | 2692 |
| 86 | Ga0501047_0035800 | 3300049581 | Unclassified | 4796 |
| 87 | Ga0501047_0106615 | 3300049581 | Unclassified | 2683 |
| 88 | Ga0501067_0003791 | 3300049583 | Bacteria | 8332 |
| 89 | Ga0501073_0001237 | 3300049589 | Bacteria | 18664 |
| 90 | Ga0501080_0082192 | 3300049742 | Unclassified | 2992 |
| 91 | Ga0501080_0174194 | 3300049742 | Bacteria | 1983 |
| 92 | Ga0501035_0000849 | 3300049822 | Bacteria | 32602 |
| 93 | Ga0501044_0001818 | 3300049823 | Bacteria | 24837 |
| 94 | nmdc:mga03683_4246_c1 | 3300050489 | Bacteria | 4724 |
| 95 | Ga0500595_013580 | 3300053119 | Bacteria | 3117 |
| 96 | Ga0500618_000495 | 3300053125 | Bacteria | 25258 |
| 97 | Ga0500616_0001243 | 3300053153 | Bacteria | 25559 |
| 98 | Ga0500645_000012 | 3300053730 | Bacteria | 168579 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | iso_pu_bacteria | 2643221609 | 2644057343 | 246 |
| 2 | 3300046474 | Ga0495605_0019384 | Ga0495605_0019384_2379_3167 | 251 |
| 3 | 3300046522 | Ga0495643_0000060 | Ga0495643_0000060_140897_141685 | 251 |
| 4 | 3300046530 | Ga0495654_0001038 | Ga0495654_0001038_19222_20010 | 251 |
| 5 | 3300049459 | Ga0495678_014281 | Ga0495678_014281_889_1677 | 251 |
| 6 | 3300025299 | Ga0209256_1001155 | Ga0209256_100115527 | 253 |
| 7 | iso_pu_bacteria | 2896184354 | 2896186853 | 255 |
| 8 | 3300046522 | Ga0495643_0000002 | Ga0495643_0000002_646726_647559 | 257 |
| 9 | 3300049459 | Ga0495678_000869 | Ga0495678_000869_22252_23085 | 257 |
| 10 | 3300046471 | Ga0495650_0000749 | Ga0495650_0000749_16515_17351 | 258 |
| 11 | 3300046542 | Ga0495597_0029605 | Ga0495597_0029605_581_1417 | 258 |
| 12 | 3300046660 | Ga0495625_0014770 | Ga0495625_0014770_1470_2291 | 258 |
| 13 | 3300047470 | Ga0495681_0000004 | Ga0495681_0000004_100243_101064 | 258 |
| 14 | 3300048091 | Ga0495626_0000001 | Ga0495626_0000001_205656_206492 | 258 |
| 15 | iso_pu_bacteria | 2978969890 | 2978973906 | 259 |
| 16 | iso_pu_bacteria | 8005246636 | 8005251161 | 259 |
| 17 | 3300005546 | Ga0070696_100007814 | Ga0070696_10000781410 | 261 |
| 18 | 3300028800 | Ga0265338_10015641 | Ga0265338_100156414 | 261 |
| 19 | 3300001979 | JGI24740J21852_10001923 | JGI24740J21852_1000192310 | 263 |
| 20 | 3300002704 | JGI25155J39150_1000014 | JGI25155J39150_1000014182 | 263 |
| 21 | 3300002705 | JGI25156J39149_1000083 | JGI25156J39149_100008353 | 263 |
| 22 | 3300002738 | JGI25154J39366_1000139 | JGI25154J39366_100013936 | 263 |
| 23 | 3300002741 | JGI25157J39369_1000110 | JGI25157J39369_100011025 | 263 |
| 24 | 3300003323 | rootH1_10038810 | rootH1_100388105 | 263 |
| 25 | 3300005327 | Ga0070658_10032983 | Ga0070658_100329834 | 263 |
| 26 | 3300025206 | Ga0209435_100027 | Ga0209435_100027176 | 263 |
| 27 | 3300025246 | Ga0209646_1000086 | Ga0209646_1000086176 | 263 |
| 28 | 3300025250 | Ga0209026_1000082 | Ga0209026_1000082176 | 263 |
| 29 | 3300025256 | Ga0209759_1000063 | Ga0209759_100006325 | 263 |
| 30 | 3300025909 | Ga0207705_10027096 | Ga0207705_100270964 | 263 |
| 31 | 3300028563 | Ga0265319_1024190 | Ga0265319_10241902 | 263 |
| 32 | 3300028577 | Ga0265318_10011909 | Ga0265318_100119093 | 263 |
| 33 | 3300046522 | Ga0495643_0018881 | Ga0495643_0018881_1280_2071 | 263 |
| 34 | 3300048919 | Ga0496116_0003701 | Ga0496116_0003701_3200_3997 | 263 |
| 35 | iso_pu_bacteria | 2989392574 | 2989394382 | 263 |
| 36 | 3300005563 | Ga0068855_100118361 | Ga0068855_1001183614 | 264 |
| 37 | 3300025949 | Ga0207667_10052748 | Ga0207667_100527483 | 264 |
| 38 | 3300028800 | Ga0265338_10063066 | Ga0265338_100630662 | 264 |
| 39 | 3300031711 | Ga0265314_10039966 | Ga0265314_100399662 | 264 |
| 40 | 3300003775 | Ga0055524_1004545 | Ga0055524_10045453 | 265 |
| 41 | 3300003775 | Ga0055524_1005072 | Ga0055524_10050724 | 265 |
| 42 | 3300005458 | Ga0070681_10365823 | Ga0070681_103658232 | 265 |
| 43 | 3300006177 | Ga0075362_10010102 | Ga0075362_100101022 | 265 |
| 44 | 3300009093 | Ga0105240_10107363 | Ga0105240_101073633 | 265 |
| 45 | 3300025912 | Ga0207707_10235909 | Ga0207707_102359092 | 265 |
| 46 | 3300025913 | Ga0207695_10277501 | Ga0207695_102775012 | 265 |
| 47 | 3300048920 | Ga0496117_0000091 | Ga0496117_0000091_163726_164529 | 265 |
| 48 | 3300050489 | nmdc:mga03683_4246_c1 | nmdc:mga03683_4246_c1_2554_3357 | 265 |
| 49 | iso_pu_bacteria | 2643221645 | 2644250404 | 265 |
| 50 | 3300025273 | Ga0209673_1040670 | Ga0209673_10406702 | 266 |
| 51 | 3300025299 | Ga0209256_1000784 | Ga0209256_10007845 | 266 |
| 52 | 3300031711 | Ga0265314_10168539 | Ga0265314_101685392 | 266 |
| 53 | 3300037471 | Ga0395905_0068650 | Ga0395905_0068650_1981_2781 | 266 |
| 54 | 3300003320 | rootH2_10184168 | rootH2_101841681 | 267 |
| 55 | 3300009176 | Ga0105242_10444744 | Ga0105242_104447441 | 267 |
| 56 | 3300009979 | Ga0105032_100069 | Ga0105032_1000695 | 267 |
| 57 | 3300015689 | Ga0183360_10002 | Ga0183360_10002536 | 267 |
| 58 | 3300031911 | Ga0307412_10022082 | Ga0307412_100220822 | 267 |
| 59 | 3300032002 | Ga0307416_100016362 | Ga0307416_1000163624 | 267 |
| 60 | 3300049581 | Ga0501047_0106615 | Ga0501047_0106615_528_1331 | 267 |
| 61 | 3300049583 | Ga0501067_0003791 | Ga0501067_0003791_1869_2672 | 267 |
| 62 | 3300049589 | Ga0501073_0001237 | Ga0501073_0001237_15939_16742 | 267 |
| 63 | 3300049742 | Ga0501080_0082192 | Ga0501080_0082192_294_1097 | 267 |
| 64 | 3300003320 | rootH2_10047187 | rootH2_100471877 | 268 |
| 65 | 3300009036 | Ga0105244_10003807 | Ga0105244_100038078 | 268 |
| 66 | 3300012513 | Ga0157326_1007914 | Ga0157326_10079141 | 268 |
| 67 | 3300025728 | Ga0207655_1001336 | Ga0207655_10013369 | 268 |
| 68 | 3300048920 | Ga0496117_0005048 | Ga0496117_0005048_7175_7984 | 268 |
| 69 | 3300048921 | Ga0496118_0001201 | Ga0496118_0001201_31025_31834 | 268 |
| 70 | 3300048927 | Ga0496124_0413512 | Ga0496124_0413512_56_865 | 268 |
| 71 | 3300005353 | Ga0070669_100004863 | Ga0070669_1000048634 | 269 |
| 72 | 3300025923 | Ga0207681_10003555 | Ga0207681_100035555 | 269 |
| 73 | 3300046458 | Ga0495591_014446 | Ga0495591_014446_147_959 | 269 |
| 74 | 3300046492 | Ga0495585_0002166 | Ga0495585_0002166_8257_9069 | 269 |
| 75 | 3300046501 | Ga0495607_0000475 | Ga0495607_0000475_27898_28710 | 269 |
| 76 | 3300046512 | Ga0495610_0042676 | Ga0495610_0042676_87_899 | 269 |
| 77 | 3300046694 | Ga0495649_0003067 | Ga0495649_0003067_3443_4255 | 269 |
| 78 | 3300048924 | Ga0496121_0026396 | Ga0496121_0026396_4101_4913 | 269 |
| 79 | 3300048925 | Ga0496122_0004070 | Ga0496122_0004070_3400_4212 | 269 |
| 80 | 3300048926 | Ga0496123_0001859 | Ga0496123_0001859_23559_24371 | 269 |
| 81 | 3300048928 | Ga0496125_0003404 | Ga0496125_0003404_2615_3427 | 269 |
| 82 | 3300053119 | Ga0500595_013580 | Ga0500595_013580_410_1219 | 269 |
| 83 | 3300053153 | Ga0500616_0001243 | Ga0500616_0001243_11833_12645 | 269 |
| 84 | 3300053730 | Ga0500645_000012 | Ga0500645_000012_96604_97437 | 269 |
| 85 | iso_pu_bacteria | 2854681122 | 2854681617 | 269 |
| 86 | 3300005467 | Ga0070706_100209565 | Ga0070706_1002095652 | 270 |
| 87 | 3300009093 | Ga0105240_10001055 | Ga0105240_1000105531 | 270 |
| 88 | 3300025913 | Ga0207695_10003207 | Ga0207695_100032072 | 270 |
| 89 | 3300035692 | Ga0373935_0012072 | Ga0373935_0012072_787_1608 | 270 |
| 90 | 3300048920 | Ga0496117_0090041 | Ga0496117_0090041_184_1038 | 270 |
| 91 | 3300049569 | Ga0501032_0000944 | Ga0501032_0000944_22210_23025 | 270 |
| 92 | 3300049580 | Ga0501046_0071642 | Ga0501046_0071642_1361_2176 | 270 |
| 93 | 3300049581 | Ga0501047_0035800 | Ga0501047_0035800_2309_3124 | 270 |
| 94 | 3300049742 | Ga0501080_0174194 | Ga0501080_0174194_245_1066 | 270 |
| 95 | 3300049822 | Ga0501035_0000849 | Ga0501035_0000849_21912_22727 | 270 |
| 96 | 3300049823 | Ga0501044_0001818 | Ga0501044_0001818_1867_2682 | 270 |
| 97 | 3300015261 | Ga0182006_1000250 | Ga0182006_100025028 | 271 |
| 98 | 3300028563 | Ga0265319_1005406 | Ga0265319_10054063 | 271 |
| 99 | 3300031240 | Ga0265320_10002343 | Ga0265320_100023436 | 271 |
| 100 | 3300044673 | Ga0453683_0122150 | Ga0453683_0122150_176_994 | 271 |
| 101 | 3300044683 | Ga0466965_0069919 | Ga0466965_0069919_628_1470 | 271 |
| 102 | 3300044694 | Ga0466963_0046509 | Ga0466963_0046509_820_1662 | 271 |
| 103 | 3300045051 | Ga0451576_0018643 | Ga0451576_0018643_283_1110 | 271 |
| 104 | 3300053125 | Ga0500618_000495 | Ga0500618_000495_10846_11670 | 271 |
| 105 | 3300000546 | LJNas_1002507 | LJNas_10025073 | 273 |
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 7s2s-assembly1.cif.gz_B | nanobody bound to interleukin-2rbeta | 0.8545 | 232 | 255 |
| 3blz-assembly1.cif.gz_D | crystal structure of a ntf2-like protein of unknown function (sbal_0622) from shewanella baltica os155 at 1.75 a resolution | 0.8277 | 232 | 253 |
| 3fjy-assembly1.cif.gz_B | crystal structure of a probable mutt1 protein from bifidobacterium adolescentis | 0.8207 | 232 | 256 |
| 3fjy-assembly1.cif.gz_A | crystal structure of a probable mutt1 protein from bifidobacterium adolescentis | 0.8195 | 232 | 256 |
| 3e9c-assembly1.cif.gz_A | structure of a tryptic core fragment of tigar from danio rerio | 0.7551 | 232 | 255 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q9V3H8_1_133_3.10.450.50 | Alpha Beta;Roll;Nuclear Transport Factor 2; Chain: A,; | 0.8424 | 232 | 252 | 3.10.450.50 |
| 2d9qB01 | Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins | 0.8393 | 231 | 254 | 2.60.40.10 |
| af_Q4DM83_18_373_2.130.10.10 | Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.8281 | 225 | 255 | 2.130.10.10 |
| 3blzB00 | Alpha Beta;Roll;Nuclear Transport Factor 2; Chain: A,; | 0.8229 | 232 | 253 | 3.10.450.50 |
| af_Q9C927_222_396_3.60.21.10 | Alpha Beta;4-Layer Sandwich;Purple Acid Phosphatase; chain A, domain 2;Metallo-dependent phosphatases | 0.8173 | 220 | 254 | 3.60.21.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A433VUT7-F1-model_v4 | DUF4258 domain-containing protein | 0.9823 | 10 | 101 |
|
| AF-A0A3D5ZWA9-F1-model_v4 | deleted | 0.9717 | 96 | 269 |
|
| AF-A0A1Z4IVW1-F1-model_v4 | deleted | 0.97 | 82 | 273 |
|
| AF-A0A7X3Y5E2-F1-model_v4 | Endonuclease | 0.9667 | 116 | 271 |
|
| AF-A0A6N9D1Y8-F1-model_v4 | Endonuclease | 0.9641 | 10 | 257 |
GO:0004519
|
Predicted Structure (AlphaFold2)
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