F031183

General Info

Members Datasets Scaffolds Average Seq Length
105 45 102 781

Family's Representative Sequence

Representative Sequence 3300005564|Ga0070664_100048073|Ga0070664_1000480732
Length 839
Sequence MNHFEHHSVMRVMSTVALAPCLLLWHLPFAIADVLADAPSNPPTNNTEDFTAPDMGQPAGITKRTPALANMLASNHPSARAVVLSQLENGQDVADMDIAELVKVKVSPFDVSTFLDKGYRASNSVSGSRIDAPIRELPFAIQAFTESFIEDQKPVNIFDIARYSPGVTYRSNDFNEGNANLSIRGFAVSATPGNVQILRDGFHGPSIFDFTNVSRVEVMKGPSSFLYGQVAPGGIVNIITKAPQRKFAATANAHYGSYGEHRVDADLTGPVSDTLFYRLAASYDQDMHYWEPYDAHSRNISPSLLWQPNDRVSVTLKYEDFLKIESPQVMQKPGYSSQVGIVPTTSDPNRSGVDVPGLPDNWNSMSYADYRNSRTKGLSTWLDYKADDHWNLRTGYSYQDYTIDMVFSGNLGMANNTTLLQGRRFRGQTYTNEDKTYEIQAVGKYVFGHTSLRLLLGAQYVERRFDNWAAQVPNNPALGSNPTASPLPLWDLGNPSTWSRVVTFPRSALTANPTDQTTEYMDKSVYGGTNWGFFGDRLLVLVGTRLTSTASQLTNRLTNQMQPKITARAVTPQYGVLYKLTSGLSVFTSYAESFVPGSQILNSPDGTTKPAEPTRGVGSDIGLKADLLGGRVSGTLTFFDIRNRNIVNDLAVTNSSGTVMIYNVQSGEQRSHGVELDTTITVTDNWQAYFSYSHMNARITKFSGRDAEILAQDPSMLDAAGKTNYKNVKLFHNAPLQMSAPDIANVWTRYNFTQGKLRGAYVAGGVNYVRDQTILPDTPQSAHQTYALINAAAGYEWTWHTQKMRLDLMGKNLADEHYRPSQSTRSRPREFLLTLTTGF

Samples

Sample ID Description Type Environment
1 2585428062 Methylibium sp. CF059 Isolate Rhizosphere
2 2919704043 Hydrogenophaga palleronii 4249 Isolate Unclassified
3 2989392574 Methylomonas rhizoryzae GJ1 Isolate Unclassified
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
12 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
13 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
14 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
15 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
16 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
23 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
25 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
26 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
27 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
28 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
29 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
30 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
31 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
32 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
33 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
34 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
35 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
36 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
37 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
38 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
39 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
40 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
41 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
42 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
43 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
44 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
45 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.14
Metatranscriptomes 0
Isolates 2.86

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.86
Nodule 0
Rhizoplane 0
Rhizosphere 75.24
Stem 0
Stem Tuber 0
Unclassified 21.9

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10036809 3300003320 Bacteria 9831
2 Ga0070670_100027541 3300005331 Bacteria 4888
3 Ga0068869_100003103 3300005334 Bacteria 10132
4 Ga0070661_100000584 3300005344 Bacteria 27716
5 Ga0070675_100036299 3300005354 Bacteria 4010
6 Ga0070659_100000461 3300005366 Bacteria 30015
7 Ga0070659_100028426 3300005366 Bacteria 4318
8 Ga0070659_100048914 3300005366 Bacteria 3323
9 Ga0070667_100001744 3300005367 Bacteria 19436
10 Ga0070667_100016326 3300005367 Bacteria 6142
11 Ga0068867_100004082 3300005459 Bacteria 10270
12 Ga0070664_100020222 3300005564 Bacteria 5481
13 Ga0070664_100048073 3300005564 Bacteria 3605
14 Ga0070664_100072027 3300005564 Bacteria 2963
15 Ga0075366_10001289 3300006195 Bacteria 12493
16 Ga0105243_10017350 3300009148 Bacteria 5441
17 Ga0105237_10003653 3300009545 Bacteria 18146
18 Ga0207645_10001729 3300025907 Bacteria 17698
19 Ga0207671_10002744 3300025914 Bacteria 18401
20 Ga0207649_10000267 3300025920 Bacteria 41185
21 Ga0207690_10001977 3300025932 Bacteria 12557
22 Ga0207689_10007372 3300025942 Bacteria 9647
23 Ga0207679_10000403 3300025945 Bacteria 30976
24 Ga0207679_10015041 3300025945 Bacteria 5101
25 Ga0207648_10003584 3300026089 Bacteria 16250
26 Ga0207674_10003102 3300026116 Bacteria 20519
27 Ga0307515_10000047 3300028794 Bacteria 291475
28 Ga0307515_10000090 3300028794 Bacteria 215043
29 Ga0307515_10046681 3300028794 Bacteria 6613
30 Ga0307515_10075644 3300028794 Bacteria 4482
31 Ga0265324_10000009 3300029957 Bacteria 254206
32 Ga0265324_10000101 3300029957 Bacteria 67787
33 Ga0265339_10000032 3300031249 Bacteria 131153
34 Ga0307516_10004723 3300031730 Bacteria 16652
35 Ga0307516_10018903 3300031730 Bacteria 7152
36 Ga0373925_0023098 3300037068 Bacteria 4538
37 Ga0400484_01339 3300038725 Bacteria 3022
38 Ga0400484_04367 3300038725 Bacteria 3619
39 Ga0400484_09457 3300038725 Bacteria 3015
40 Ga0400484_33764 3300038725 Bacteria 8439
41 Ga0400490_08312 3300038726 Bacteria 11182
42 Ga0400490_12052 3300038726 Bacteria 47577
43 Ga0400490_29790 3300038726 Bacteria 76189
44 Ga0400490_48022 3300038726 Bacteria 21175
45 Ga0400491_23689 3300038727 Bacteria 3999
46 Ga0400488_46515 3300038741 Bacteria 27109
47 Ga0400488_57666 3300038741 Bacteria 12141
48 Ga0400483_090231 3300039062 Bacteria 2928
49 Ga0400483_203811 3300039062 Bacteria 23981
50 Ga0400487_60010 3300039110 Bacteria 4940
51 Ga0451577_0000020 3300042876 Bacteria 477488
52 Ga0451577_0000044 3300042876 Bacteria 329357
53 Ga0451577_0000457 3300042876 Bacteria 71078
54 Ga0451577_0002024 3300042876 Bacteria 25131
55 Ga0451577_0008883 3300042876 Bacteria 9728
56 Ga0451577_0010556 3300042876 Bacteria 8811
57 Ga0451577_0030745 3300042876 Bacteria 4850
58 Ga0451577_0112144 3300042876 Bacteria 2440
59 Ga0453683_0000183 3300044673 Bacteria 86894
60 Ga0453683_0002918 3300044673 Bacteria 12918
61 Ga0453683_0009782 3300044673 Bacteria 6392
62 Ga0453684_0000001 3300044712 Bacteria 2623166
63 Ga0453684_0000005 3300044712 Bacteria 1431632
64 Ga0453684_0000116 3300044712 Bacteria 352304
65 Ga0453684_0000147 3300044712 Bacteria 308490
66 Ga0453684_0000246 3300044712 Bacteria 233363
67 Ga0453684_0000276 3300044712 Bacteria 222326
68 Ga0453684_0000341 3300044712 Bacteria 194228
69 Ga0453684_0000449 3300044712 Bacteria 166164
70 Ga0453684_0000471 3300044712 Bacteria 159987
71 Ga0453684_0000586 3300044712 Bacteria 135374
72 Ga0453684_0000897 3300044712 Bacteria 99450
73 Ga0453684_0001388 3300044712 Bacteria 70079
74 Ga0453684_0002247 3300044712 Bacteria 47898
75 Ga0453684_0004071 3300044712 Bacteria 31771
76 Ga0453684_0004835 3300044712 Bacteria 27650
77 Ga0453684_0008866 3300044712 Bacteria 17821
78 Ga0453684_0013329 3300044712 Bacteria 13377
79 Ga0453684_0014503 3300044712 Bacteria 12589
80 Ga0453684_0015845 3300044712 Bacteria 11851
81 Ga0453684_0023906 3300044712 Bacteria 8966
82 Ga0453684_0044663 3300044712 Bacteria 5922
83 Ga0453684_0046209 3300044712 Bacteria 5794
84 Ga0453684_0097904 3300044712 Bacteria 3598
85 Ga0453684_0108879 3300044712 Unclassified 3371
86 Ga0451576_0000047 3300045051 Bacteria 329357
87 Ga0451576_0000167 3300045051 Bacteria 166164
88 Ga0451576_0000259 3300045051 Bacteria 129591
89 Ga0451576_0000962 3300045051 Bacteria 53878
90 Ga0451576_0001472 3300045051 Bacteria 39908
91 Ga0451576_0006527 3300045051 Bacteria 14273
92 Ga0451576_0008193 3300045051 Bacteria 12302
93 Ga0451576_0015306 3300045051 Bacteria 8502
94 Ga0451576_0019059 3300045051 Bacteria 7498
95 Ga0451576_0020750 3300045051 Bacteria 7151
96 Ga0495610_0007373 3300046512 Bacteria 7339
97 Ga0495632_0011804 3300046519 Bacteria 5084
98 Ga0495625_0005475 3300046660 Bacteria 11563
99 Ga0501198_000008 3300049649 Bacteria 129023
100 Ga0501222_000006 3300049662 Bacteria 129030
101 nmdc:mga0k408_860_c2 3300050493 Bacteria 13060
102 Ga0500587_000058 3300053739 Bacteria 8928

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300042876 Ga0451577_0112144 Ga0451577_0112144_430_2406 657
2 3300049649 Ga0501198_000008 Ga0501198_000008_99490_101709 739
3 3300049662 Ga0501222_000006 Ga0501222_000006_27335_29554 739
4 3300044712 Ga0453684_0044663 Ga0453684_0044663_392_2797 742
5 3300028794 Ga0307515_10000047 Ga0307515_1000004716 743
6 3300044712 Ga0453684_0108879 Ga0453684_0108879_802_3036 744
7 3300006195 Ga0075366_10001289 Ga0075366_100012893 750
8 3300029957 Ga0265324_10000101 Ga0265324_1000010116 750
9 3300031249 Ga0265339_10000032 Ga0265339_1000003230 750
10 3300044712 Ga0453684_0004835 Ga0453684_0004835_6023_8356 753
11 3300005367 Ga0070667_100016326 Ga0070667_1000163262 755
12 3300044712 Ga0453684_0000116 Ga0453684_0000116_60440_62761 756
13 3300044712 Ga0453684_0023906 Ga0453684_0023906_3820_6096 758
14 3300009148 Ga0105243_10017350 Ga0105243_100173503 761
15 3300037068 Ga0373925_0023098 Ga0373925_0023098_1221_3509 762
16 3300044712 Ga0453684_0015845 Ga0453684_0015845_6230_8674 762
17 3300038726 Ga0400490_08312 Ga0400490_08312_1971_4265 764
18 3300045051 Ga0451576_0015306 Ga0451576_0015306_969_3275 766
19 3300050493 nmdc:mga0k408_860_c2 nmdc:mga0k408_860_c2_7113_9458 766
20 3300044712 Ga0453684_0000341 Ga0453684_0000341_148936_151302 768
21 3300005564 Ga0070664_100072027 Ga0070664_1000720272 769
22 3300038725 Ga0400484_09457 Ga0400484_09457_569_2878 769
23 3300039062 Ga0400483_090231 Ga0400483_090231_505_2814 769
24 3300039062 Ga0400483_203811 Ga0400483_203811_9451_11760 769
25 3300042876 Ga0451577_0000020 Ga0451577_0000020_292765_295194 769
26 3300044673 Ga0453683_0009782 Ga0453683_0009782_141_2570 769
27 3300044712 Ga0453684_0000246 Ga0453684_0000246_196939_199368 769
28 3300045051 Ga0451576_0000962 Ga0451576_0000962_14823_17252 769
29 3300005331 Ga0070670_100027541 Ga0070670_1000275413 770
30 3300005334 Ga0068869_100003103 Ga0068869_1000031037 770
31 3300005354 Ga0070675_100036299 Ga0070675_1000362993 770
32 3300005459 Ga0068867_100004082 Ga0068867_1000040823 770
33 3300025907 Ga0207645_10001729 Ga0207645_1000172913 770
34 3300025942 Ga0207689_10007372 Ga0207689_100073727 770
35 3300026089 Ga0207648_10003584 Ga0207648_100035843 770
36 3300026116 Ga0207674_10003102 Ga0207674_1000310219 770
37 3300038726 Ga0400490_12052 Ga0400490_12052_25081_27393 770
38 3300038727 Ga0400491_23689 Ga0400491_23689_518_2830 770
39 3300044712 Ga0453684_0097904 Ga0453684_0097904_985_3357 770
40 3300005366 Ga0070659_100028426 Ga0070659_1000284262 771
41 3300042876 Ga0451577_0030745 Ga0451577_0030745_1464_3779 771
42 3300044712 Ga0453684_0000276 Ga0453684_0000276_73157_75472 771
43 3300045051 Ga0451576_0001472 Ga0451576_0001472_28887_31202 771
44 3300028794 Ga0307515_10075644 Ga0307515_100756443 772
45 3300042876 Ga0451577_0010556 Ga0451577_0010556_5940_8291 772
46 3300044712 Ga0453684_0000147 Ga0453684_0000147_226313_228664 772
47 3300045051 Ga0451576_0019059 Ga0451576_0019059_1570_3888 772
48 3300045051 Ga0451576_0020750 Ga0451576_0020750_1639_3969 772
49 3300005366 Ga0070659_100048914 Ga0070659_1000489143 773
50 3300038725 Ga0400484_01339 Ga0400484_01339_527_2857 773
51 3300042876 Ga0451577_0000457 Ga0451577_0000457_6417_8753 773
52 3300044712 Ga0453684_0000005 Ga0453684_0000005_67698_70034 773
53 3300046512 Ga0495610_0007373 Ga0495610_0007373_1034_3355 773
54 3300053739 Ga0500587_000058 Ga0500587_000058_3382_5703 773
55 3300044712 Ga0453684_0000897 Ga0453684_0000897_35221_37557 775
56 3300038726 Ga0400490_48022 Ga0400490_48022_6629_8983 776
57 3300044712 Ga0453684_0000001 Ga0453684_0000001_1965334_1967829 776
58 3300028794 Ga0307515_10000090 Ga0307515_10000090189 777
59 3300044712 Ga0453684_0008866 Ga0453684_0008866_5753_8278 777
60 3300044712 Ga0453684_0001388 Ga0453684_0001388_3599_5968 778
61 3300005344 Ga0070661_100000584 Ga0070661_1000005847 779
62 3300005366 Ga0070659_100000461 Ga0070659_10000046121 779
63 3300005564 Ga0070664_100020222 Ga0070664_1000202223 779
64 3300009545 Ga0105237_10003653 Ga0105237_100036538 779
65 3300025914 Ga0207671_10002744 Ga0207671_100027445 779
66 3300025920 Ga0207649_10000267 Ga0207649_1000026732 779
67 3300025932 Ga0207690_10001977 Ga0207690_100019776 779
68 3300025945 Ga0207679_10000403 Ga0207679_100004034 779
69 3300044712 Ga0453684_0002247 Ga0453684_0002247_9033_11375 779
70 3300044712 Ga0453684_0014503 Ga0453684_0014503_6901_9282 779
71 3300045051 Ga0451576_0000259 Ga0451576_0000259_20904_23246 779
72 iso_pu_bacteria 2919704043 2919705663 779
73 3300042876 Ga0451577_0008883 Ga0451577_0008883_1520_3880 780
74 3300042876 Ga0451577_0002024 Ga0451577_0002024_16422_18779 782
75 3300044673 Ga0453683_0002918 Ga0453683_0002918_8342_10699 782
76 3300044712 Ga0453684_0013329 Ga0453684_0013329_6832_9189 782
77 3300045051 Ga0451576_0008193 Ga0451576_0008193_3490_5847 782
78 iso_pu_bacteria 2585428062 2587756236 783
79 3300005367 Ga0070667_100001744 Ga0070667_1000017446 784
80 3300028794 Ga0307515_10046681 Ga0307515_100466814 784
81 3300029957 Ga0265324_10000009 Ga0265324_1000000966 784
82 3300031730 Ga0307516_10004723 Ga0307516_100047235 784
83 3300031730 Ga0307516_10018903 Ga0307516_100189036 784
84 3300044712 Ga0453684_0000471 Ga0453684_0000471_128884_131274 784
85 3300046519 Ga0495632_0011804 Ga0495632_0011804_1881_4253 784
86 3300046660 Ga0495625_0005475 Ga0495625_0005475_4508_6880 784
87 iso_pu_bacteria 2989392574 2989393464 784
88 3300042876 Ga0451577_0000044 Ga0451577_0000044_82271_84640 785
89 3300044673 Ga0453683_0000183 Ga0453683_0000183_6671_9040 785
90 3300044712 Ga0453684_0000586 Ga0453684_0000586_60771_63233 785
91 3300045051 Ga0451576_0000047 Ga0451576_0000047_244718_247087 785
92 3300038725 Ga0400484_33764 Ga0400484_33764_3660_6020 786
93 3300045051 Ga0451576_0006527 Ga0451576_0006527_5057_7441 787
94 3300005564 Ga0070664_100048073 Ga0070664_1000480732 788
95 3300025945 Ga0207679_10015041 Ga0207679_100150412 788
96 3300038725 Ga0400484_04367 Ga0400484_04367_1022_3406 788
97 3300038726 Ga0400490_29790 Ga0400490_29790_7758_10145 788
98 3300038741 Ga0400488_46515 Ga0400488_46515_18662_21118 788
99 3300038741 Ga0400488_57666 Ga0400488_57666_6614_8986 788
100 3300039110 Ga0400487_60010 Ga0400487_60010_2103_4475 788
101 3300044712 Ga0453684_0000449 Ga0453684_0000449_67458_69980 788
102 3300044712 Ga0453684_0004071 Ga0453684_0004071_12817_15264 788
103 3300045051 Ga0451576_0000167 Ga0451576_0000167_67458_69980 788
104 3300044712 Ga0453684_0046209 Ga0453684_0046209_173_2647 789
105 3300003320 rootH2_10036809 rootH2_100368094 790

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07715

Plug

TonB-dependent Receptor Plug Domain

133

235

0.95

PF00593

TonB_dep_Rec_b-barrel

TonB dependent receptor-like, beta-barrel

326

813

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
3qlb-assembly2.cif.gz_B enantiopyochelin outer membrane tonb-dependent transporter from pseudomonas fluorescens bound to the ferri-enantiopyochelin 0.86 66 790
3qlb-assembly1.cif.gz_A enantiopyochelin outer membrane tonb-dependent transporter from pseudomonas fluorescens bound to the ferri-enantiopyochelin 0.8588 66 790
3qlb-assembly2.cif.gz_B enantiopyochelin outer membrane tonb-dependent transporter from pseudomonas fluorescens bound to the ferri-enantiopyochelin 0.8501 66 790
3qlb-assembly1.cif.gz_A enantiopyochelin outer membrane tonb-dependent transporter from pseudomonas fluorescens bound to the ferri-enantiopyochelin 0.849 66 790
6i97-assembly1.cif.gz_B structure of the ferrioxamine b transporter foxa from pseudomonas aeruginosa in complex with ferrioxamine b and a c-terminal tonb fragment 0.8374 66 790
ID Description Score Start End Superfamily
3qlbB02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.8586 195 790 2.40.170.20
3qlbB02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.8571 195 790 2.40.170.20
2w6tA03 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.8213 194 790 2.40.170.20
2w6tA03 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.8199 194 790 2.40.170.20
1xkwA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.8168 194 790 2.40.170.20
ID Description Score Start End GO Terms
AF-A0A1G0M0S9-F1-model_v4 TonB-dependent receptor 0.9321 25 790 GO:0009279
GO:0015344
AF-A0A836ZMD7-F1-model_v4 deleted 0.9072 81 547
AF-A0A1G0M0S9-F1-model_v4 TonB-dependent receptor 0.9036 25 790 GO:0009279
GO:0015344
AF-A0A836ZMD7-F1-model_v4 deleted 0.8972 81 547
AF-A0A1F8I8F2-F1-model_v4 deleted 0.8856 130 728

Feature Viewer

pLDDT pTM Quality
83.3 0.85 High
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Predicted Structure (AlphaFold2)

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