F029261

General Info

Members Datasets Scaffolds Average Seq Length
104 37 208 373

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2740891818|2740990234
Length 406
Sequence HRIYFENSARMAAMDDRSVDLVVTSPPYPMIEMWDGMFYAQNPSIERAMADNDSMAAFELMHRQLDLVWRECWRVLKEGGFACINIGDATRTVAGQFRLYPNHGRILSALTDLGFGPLPDILWRKQTNAPNKFMGSGMLPAGAYVTLEHEYILIVRKGGKRVFAAAEEKKNRHRSALFWEERNTLFSDLWMDLKGTGQKLGDSATRKRSAAYPFEAAYRLINMYSVKGDTVLDPYLGTGTTMAAAMAAGRNSVGFEIDSALADEIGGALGGIVEFANARMAERLEKHVAFARERIKSRGPLKYRNAHYGFPVVTGQERELLLNDLTGVSVPAENLFEVSYDTTAQAAYCRDWHGYFQECHRGECEGKDNGAGQEKKKKGLGNADSGHGKIKAQETQLNLFAELTIP

Samples

Sample ID Description Type Environment
1 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
2 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
3 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
4 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
5 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
6 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
7 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
8 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
9 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
10 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
11 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
12 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
13 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
14 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
15 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
16 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
17 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
18 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
19 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
20 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
21 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
22 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
23 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
24 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
25 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
26 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
27 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
28 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
29 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
30 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
31 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
32 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
33 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
34 2740891818 Desulfofaba hansenii DSM 12642 Isolate Unclassified
35 2597490337 Halobacterium salinarum DSM 3754 Isolate Nodule
36 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
37 2898713307 Sphingobacterium sp. SGG-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.15
Metatranscriptomes 0
Isolates 3.85

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0.96
Rhizoplane 0
Rhizosphere 61.54
Stem 0
Stem Tuber 0
Unclassified 12.5

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075431_100105564 3300006847 Archaea 2907
2 Ga0105240_10022134 3300009093 Bacteria 8434
3 Ga0111539_10167281 3300009094 Archaea 2570
4 Ga0213875_10000669 3300021388 Bacteria 27035
5 Ga0207695_10017265 3300025913 Bacteria 8403
6 Ga0265322_10013695 3300028654 Archaea 2348
7 Ga0265338_10114209 3300028800 Unclassified 2167
8 Ga0265316_10004102 3300031344 Archaea 14588
9 Ga0265316_10022643 3300031344 Bacteria 5291
10 Ga0265316_10092545 3300031344 Bacteria 2305
11 Ga0316575_10006753 3300031665 Bacteria 4143
12 Ga0316575_10028638 3300031665 Bacteria 2172
13 Ga0316575_10032529 3300031665 Bacteria 2043
14 Ga0316575_10058123 3300031665 Bacteria 1542
15 Ga0316579_10000905 3300031691 Bacteria 10292
16 Ga0316579_10006489 3300031691 Unclassified 4775
17 Ga0316579_10091439 3300031691 Bacteria 1453
18 Ga0316576_10003415 3300031727 Bacteria 9296
19 Ga0316576_10046608 3300031727 Bacteria 3138
20 Ga0316576_10063384 3300031727 Bacteria 2713
21 Ga0316576_10114496 3300031727 Bacteria 2023
22 Ga0316576_10120031 3300031727 Unclassified 1973
23 Ga0316576_10124608 3300031727 Unclassified 1935
24 Ga0316578_10002405 3300031728 Bacteria 8187
25 Ga0316578_10029427 3300031728 Bacteria 3117
26 Ga0316578_10181296 3300031728 Bacteria 1269
27 Ga0316577_10001810 3300031733 Bacteria 10321
28 Ga0316577_10003564 3300031733 Bacteria 7884
29 Ga0316577_10013668 3300031733 Bacteria 4446
30 Ga0316577_10023999 3300031733 Unclassified 3388
31 Ga0316577_10032045 3300031733 Unclassified 2936
32 Ga0316577_10056607 3300031733 Bacteria 2189
33 Ga0316577_10068990 3300031733 Unclassified 1975
34 Ga0316577_10112152 3300031733 Bacteria 1530
35 Ga0316577_10127459 3300031733 Archaea 1432
36 Ga0316583_10002531 3300032133 Bacteria 6364
37 Ga0316583_10006115 3300032133 Bacteria 4329
38 Ga0316583_10017202 3300032133 Bacteria 2600
39 Ga0316585_10011606 3300032137 Unclassified 2600
40 Ga0316585_10020275 3300032137 Unclassified 2034
41 Ga0316580_10012447 3300032139 Bacteria 2592
42 Ga0316580_10021889 3300032139 Bacteria 1972
43 Ga0316574_0000669 3300035398 Bacteria 14478
44 Ga0316574_0002493 3300035398 Bacteria 9251
45 Ga0316574_0177031 3300035398 Bacteria 1372
46 Ga0316582_0001461 3300036647 Bacteria 10385
47 Ga0316582_0003275 3300036647 Bacteria 7901
48 Ga0316582_0014291 3300036647 Bacteria 4500
49 Ga0316582_0034309 3300036647 Bacteria 3124
50 Ga0316582_0070893 3300036647 Bacteria 2255
51 Ga0316582_0149563 3300036647 Bacteria 1578
52 Ga0316582_0208049 3300036647 Bacteria 1336
53 Ga0316582_0218278 3300036647 Bacteria 1303
54 Ga0316582_0220167 3300036647 Bacteria 1298
55 Ga0316584_0001642 3300036712 Bacteria 13650
56 Ga0316584_0053699 3300036712 Bacteria 3016
57 Ga0316584_0077699 3300036712 Bacteria 2486
58 Ga0316584_0112346 3300036712 Unclassified 2038
59 Ga0316581_0003491 3300037588 Bacteria 3917
60 Ga0436364_0079644 3300037853 Bacteria 315114
61 Ga0400484_22865 3300038725 Bacteria 6236
62 Ga0400484_25771 3300038725 Bacteria 7785
63 Ga0400484_30087 3300038725 Bacteria 9224
64 Ga0400484_44111 3300038725 Bacteria 1845
65 Ga0400490_09869 3300038726 Bacteria 4506
66 Ga0400490_47531 3300038726 Bacteria 2443
67 Ga0400490_58773 3300038726 Bacteria 5998
68 Ga0400490_59251 3300038726 Bacteria 2914
69 Ga0400491_18245 3300038727 Bacteria 5441
70 Ga0400485_04660 3300038735 Bacteria 12590
71 Ga0400485_17645 3300038735 Bacteria 6853
72 Ga0400488_30329 3300038741 Bacteria 5617
73 Ga0400486_01319 3300038742 Bacteria 16947
74 Ga0400486_02799 3300038742 Bacteria 6682
75 Ga0400486_09814 3300038742 Bacteria 29577
76 Ga0400486_26523 3300038742 Bacteria 15319
77 Ga0400486_27161 3300038742 Bacteria 28668
78 Ga0400483_009408 3300039062 Bacteria 3831
79 Ga0400483_021395 3300039062 Bacteria 114250
80 Ga0400483_033845 3300039062 Bacteria 1205
81 Ga0400483_042311 3300039062 Bacteria 2169
82 Ga0400483_062152 3300039062 Bacteria 3331
83 Ga0400483_124106 3300039062 Bacteria 1965
84 Ga0400483_160140 3300039062 Bacteria 13778
85 Ga0400483_179016 3300039062 Bacteria 8211
86 Ga0400483_282292 3300039062 Unclassified 1444
87 Ga0400489_00009 3300039093 Bacteria 1748
88 Ga0400489_03977 3300039093 Bacteria 16547
89 Ga0400489_07370 3300039093 Bacteria 22555
90 Ga0400489_27998 3300039093 Bacteria 19682
91 Ga0400489_29584 3300039093 Bacteria 15480
92 Ga0400489_91897 3300039093 Bacteria 19520
93 Ga0400487_18943 3300039110 Bacteria 2928
94 Ga0400487_27717 3300039110 Bacteria 37527
95 Ga0400487_36353 3300039110 Unclassified 1755
96 Ga0400487_44766 3300039110 Unclassified 2987
97 Ga0453684_0027309 3300044712 Bacteria 8192
98 Ga0453684_0057490 3300044712 Bacteria 5034
99 Ga0501031_0249178 3300049568 Archaea 1154
100 nmdc:mga06r32_178701_c1 3300050510 Archaea 2107
101 2740990234 2740891818 Bacteria 6711283
102 2599019616 2597490337 Archaea 2364912
103 2884934959 2884933994 Bacteria 4535041
104 2898716360 2898713307 Bacteria 4110805
105 Ga0075431_100105564
106 Ga0105240_10022134
107 Ga0111539_10167281
108 Ga0213875_10000669
109 Ga0207695_10017265
110 Ga0265322_10013695
111 Ga0265338_10114209
112 Ga0265316_10004102
113 Ga0265316_10022643
114 Ga0265316_10092545
115 Ga0316575_10006753
116 Ga0316575_10028638
117 Ga0316575_10032529
118 Ga0316575_10058123
119 Ga0316579_10000905
120 Ga0316579_10006489
121 Ga0316579_10091439
122 Ga0316576_10003415
123 Ga0316576_10046608
124 Ga0316576_10063384
125 Ga0316576_10114496
126 Ga0316576_10120031
127 Ga0316576_10124608
128 Ga0316578_10002405
129 Ga0316578_10029427
130 Ga0316578_10181296
131 Ga0316577_10001810
132 Ga0316577_10003564
133 Ga0316577_10013668
134 Ga0316577_10023999
135 Ga0316577_10032045
136 Ga0316577_10056607
137 Ga0316577_10068990
138 Ga0316577_10112152
139 Ga0316577_10127459
140 Ga0316583_10002531
141 Ga0316583_10006115
142 Ga0316583_10017202
143 Ga0316585_10011606
144 Ga0316585_10020275
145 Ga0316580_10012447
146 Ga0316580_10021889
147 Ga0316574_0000669
148 Ga0316574_0002493
149 Ga0316574_0177031
150 Ga0316582_0001461
151 Ga0316582_0003275
152 Ga0316582_0014291
153 Ga0316582_0034309
154 Ga0316582_0070893
155 Ga0316582_0149563
156 Ga0316582_0208049
157 Ga0316582_0218278
158 Ga0316582_0220167
159 Ga0316584_0001642
160 Ga0316584_0053699
161 Ga0316584_0077699
162 Ga0316584_0112346
163 Ga0316581_0003491
164 Ga0436364_0079644
165 Ga0400484_22865
166 Ga0400484_25771
167 Ga0400484_30087
168 Ga0400484_44111
169 Ga0400490_09869
170 Ga0400490_47531
171 Ga0400490_58773
172 Ga0400490_59251
173 Ga0400491_18245
174 Ga0400485_04660
175 Ga0400485_17645
176 Ga0400488_30329
177 Ga0400486_01319
178 Ga0400486_02799
179 Ga0400486_09814
180 Ga0400486_26523
181 Ga0400486_27161
182 Ga0400483_009408
183 Ga0400483_021395
184 Ga0400483_033845
185 Ga0400483_042311
186 Ga0400483_062152
187 Ga0400483_124106
188 Ga0400483_160140
189 Ga0400483_179016
190 Ga0400483_282292
191 Ga0400489_00009
192 Ga0400489_03977
193 Ga0400489_07370
194 Ga0400489_27998
195 Ga0400489_29584
196 Ga0400489_91897
197 Ga0400487_18943
198 Ga0400487_27717
199 Ga0400487_36353
200 Ga0400487_44766
201 Ga0453684_0027309
202 Ga0453684_0057490
203 Ga0501031_0249178
204 nmdc:mga06r32_178701_c1
205 2740990234
206 2599019616
207 2884934959
208 2898716360

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01555

N6_N4_Mtase

DNA methylase

19

266

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
5una-assembly6.cif.gz_F fragment of 7sk snrna methylphosphate capping enzyme 0.8984 70 91
5una-assembly1.cif.gz_A fragment of 7sk snrna methylphosphate capping enzyme 0.8694 70 89
3gdh-assembly2.cif.gz_B methyltransferase domain of human trimethylguanosine synthase 1 (tgs1) bound to m7gtp and adenosyl-homocysteine (active form) 0.8535 191 251
1wy7-assembly1.cif.gz_A crystal structure of a putative rna methyltransferase ph1948 from pyrococcus horikoshii 0.8197 193 248
3egi-assembly1.cif.gz_D methyltransferase domain of human trimethylguanosine synthase tgs1 bound to m7gpppa (inactive form) 0.8174 192 251
ID Description Score Start End Superfamily
af_P9WJZ3_50_210_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8507 192 248 3.40.50.150
af_Q8IDQ7_255_493_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8496 191 240 3.40.50.150
af_Q58392_9_296_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8303 6 250 3.40.50.150
af_P85107_628_846_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8293 191 251 3.40.50.150
af_Q9LIN4_192_384_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8234 189 238 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A7C7PPW1-F1-model_v4 deleted 0.9352 188 326
AF-A0A7C7PPW1-F1-model_v4 deleted 0.9287 188 326
AF-A0A6A9SS28-F1-model_v4 Type II methyltransferase (EC 2.1.1.113) (N-4 cytosine-specific methyltransferase) 0.8646 2 322 GO:0003677
GO:0008170
GO:0009307
GO:0015667
GO:0032259
AF-S7VH23-F1-model_v4 Methyltransferase (EC 2.1.1.-) 0.8614 2 320 GO:0003677
GO:0008170
GO:0009307
GO:0015667
GO:0032259
AF-A0A836QJ29-F1-model_v4 Methyltransferase (EC 2.1.1.-) 0.8589 16 323 GO:0003677
GO:0005737
GO:0008170
GO:0009007
GO:0009307
GO:0015667
GO:0032259

Map