F022669
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 103 | 76 | 99 | 288 |
Family's Representative Sequence
| Representative Sequence | 3300046681|Ga0495647_0000021|Ga0495647_0000021_61410_62324 |
| Length | 304 |
| Sequence | MRKHPKSRGVVPVAILVTALFLLVLAGTAQAKLTGEFTKFQNCPYTNEEVRRCLYSVTNGGEVLLGTKKVPIEKEVILQGGYGKPNFEEENPEFLVAKFFAATNGITLSKAAQNVPGGLLGIVPEEKSPALVKALIKFFFENKITGVTSTLELAKPASDIRISENHLAEGEGVALKLPVKVHLENPFLGKNCYVGSSTSPITLQLTSGVTSPPKGTTPITGKVGEVEFLEEARILRLNGNELADNAWSAPAASGCGGIISFLVTPIINGQIGLPSAAGKNTAILKNTVMTTTADALITNNAEHP |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300004798 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) | Metatranscriptome | Unclassified |
| 2 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 3 | 3300005333 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 6 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 7 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 8 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 10 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 11 | 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Metagenome | Rhizosphere |
| 12 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 13 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 14 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 15 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 16 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 17 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 18 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 19 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 20 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 21 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 22 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 23 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 24 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 25 | 3300020070 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 26 | 3300020078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 27 | 3300025893 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 28 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 29 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 30 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 31 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300035120 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 | Metagenome | Rhizosphere |
| 42 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 43 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 44 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 45 | 3300046458 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere | Metagenome | Rhizosphere |
| 46 | 3300046475 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere | Metagenome | Rhizosphere |
| 47 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 48 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 49 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 50 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 51 | 3300046679 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere | Metagenome | Rhizosphere |
| 52 | 3300046681 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere | Metagenome | Rhizosphere |
| 53 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 54 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 55 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 56 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 57 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 58 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 59 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 60 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 61 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 62 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 63 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 64 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 65 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 66 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 67 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 68 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 69 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 70 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 71 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 72 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 73 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 74 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 75 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 76 | 3300059492 | Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 14R_AD_T1_R2 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 95.15 |
| Metatranscriptomes | 4.85 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 13.59 |
| Rhizosphere | 81.55 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 4.85 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0058859_11640198 | 3300004798 | Bacteria | 1154 |
| 2 | Ga0070683_100002405 | 3300005329 | Bacteria | 14861 |
| 3 | Ga0070683_100007199 | 3300005329 | Bacteria | 9384 |
| 4 | Ga0070677_10001544 | 3300005333 | Bacteria | 7285 |
| 5 | Ga0070663_100068254 | 3300005455 | Unclassified | 2581 |
| 6 | Ga0070663_100173615 | 3300005455 | Bacteria | 1668 |
| 7 | Ga0070681_10124235 | 3300005458 | Bacteria | 2513 |
| 8 | Ga0070679_100533476 | 3300005530 | Unclassified | 1117 |
| 9 | Ga0070684_100059489 | 3300005535 | Unclassified | 3340 |
| 10 | Ga0070684_100143590 | 3300005535 | Bacteria | 2160 |
| 11 | Ga0070665_100000040 | 3300005548 | Bacteria | 305480 |
| 12 | Ga0070665_100044827 | 3300005548 | Unclassified | 4440 |
| 13 | Ga0068854_100291788 | 3300005578 | Bacteria | 1316 |
| 14 | Ga0068856_100002767 | 3300005614 | Bacteria | 17953 |
| 15 | Ga0068866_10009762 | 3300005718 | Bacteria | 4088 |
| 16 | Ga0068858_100001457 | 3300005842 | Bacteria | 24338 |
| 17 | Ga0068858_100038412 | 3300005842 | Unclassified | 4440 |
| 18 | Ga0081455_10009421 | 3300005937 | Bacteria | 10046 |
| 19 | Ga0097621_100087854 | 3300006237 | Bacteria | 2597 |
| 20 | Ga0075434_100053785 | 3300006871 | Unclassified | 4000 |
| 21 | Ga0105245_10001002 | 3300009098 | Bacteria | 25634 |
| 22 | Ga0105245_10010514 | 3300009098 | Bacteria | 8052 |
| 23 | Ga0105245_10040684 | 3300009098 | Bacteria | 4142 |
| 24 | Ga0105242_10036439 | 3300009176 | Unclassified | 3946 |
| 25 | Ga0105238_10576665 | 3300009551 | Unclassified | 1131 |
| 26 | Ga0105249_10036017 | 3300009553 | Unclassified | 4489 |
| 27 | Ga0105249_10055391 | 3300009553 | Bacteria | 3627 |
| 28 | Ga0157370_10055671 | 3300013104 | Unclassified | 3766 |
| 29 | Ga0157374_10000200 | 3300013296 | Bacteria | 55348 |
| 30 | Ga0157374_10003102 | 3300013296 | Bacteria | 13944 |
| 31 | Ga0157374_10067335 | 3300013296 | Unclassified | 3367 |
| 32 | Ga0157375_10010760 | 3300013308 | Bacteria | 8060 |
| 33 | Ga0157379_10055075 | 3300014968 | Unclassified | 3554 |
| 34 | Ga0157376_10031719 | 3300014969 | Bacteria | 4236 |
| 35 | Ga0206356_10897571 | 3300020070 | Bacteria | 2779 |
| 36 | Ga0206356_11876133 | 3300020070 | Bacteria | 1111 |
| 37 | Ga0206352_10325691 | 3300020078 | Bacteria | 3204 |
| 38 | Ga0207682_10003115 | 3300025893 | Bacteria | 7264 |
| 39 | Ga0207707_10045223 | 3300025912 | Unclassified | 3837 |
| 40 | Ga0207660_10025114 | 3300025917 | Bacteria | 4043 |
| 41 | Ga0207652_10029613 | 3300025921 | Bacteria | 4580 |
| 42 | Ga0207694_10002951 | 3300025924 | Bacteria | 13653 |
| 43 | Ga0207687_10000079 | 3300025927 | Bacteria | 70683 |
| 44 | Ga0207687_10004935 | 3300025927 | Bacteria | 8856 |
| 45 | Ga0207687_10013205 | 3300025927 | Bacteria | 5395 |
| 46 | Ga0207686_10016979 | 3300025934 | Unclassified | 4092 |
| 47 | Ga0207661_10001783 | 3300025944 | Bacteria | 14715 |
| 48 | Ga0207661_10007650 | 3300025944 | Bacteria | 7686 |
| 49 | Ga0207712_10030402 | 3300025961 | Bacteria | 3631 |
| 50 | Ga0207712_10038068 | 3300025961 | Unclassified | 3286 |
| 51 | Ga0207640_10055128 | 3300025981 | Unclassified | 2602 |
| 52 | Ga0207703_10000078 | 3300026035 | Bacteria | 115634 |
| 53 | Ga0207703_10002924 | 3300026035 | Bacteria | 14534 |
| 54 | Ga0207678_10019701 | 3300026067 | Bacteria | 5933 |
| 55 | Ga0207678_10021380 | 3300026067 | Bacteria | 5673 |
| 56 | Ga0207702_10002066 | 3300026078 | Bacteria | 19424 |
| 57 | Ga0268266_10000045 | 3300028379 | Bacteria | 312955 |
| 58 | Ga0268266_10019170 | 3300028379 | Bacteria | 5825 |
| 59 | Ga0373957_0008772 | 3300035120 | Unclassified | 3291 |
| 60 | Ga0373955_0023465 | 3300035172 | Unclassified | 3143 |
| 61 | Ga0373937_0042149 | 3300036401 | Unclassified | 4164 |
| 62 | Ga0451853_2233331 | 3300041512 | Bacteria | 4250 |
| 63 | Ga0495591_016030 | 3300046458 | Unclassified | 2625 |
| 64 | Ga0495639_0172485 | 3300046475 | Bacteria | 1050 |
| 65 | Ga0495630_0015209 | 3300046517 | Bacteria | 5614 |
| 66 | Ga0495643_0008078 | 3300046522 | Bacteria | 6708 |
| 67 | Ga0495652_0022153 | 3300046529 | Bacteria | 5641 |
| 68 | Ga0495599_0005998 | 3300046678 | Bacteria | 7311 |
| 69 | Ga0495623_0051244 | 3300046679 | Bacteria | 2612 |
| 70 | Ga0495623_0075771 | 3300046679 | Bacteria | 2088 |
| 71 | Ga0495623_0120351 | 3300046679 | Bacteria | 1581 |
| 72 | Ga0495647_0000021 | 3300046681 | Bacteria | 72778 |
| 73 | Ga0495669_0013353 | 3300046684 | Bacteria | 3498 |
| 74 | Ga0495624_0000095 | 3300046690 | Bacteria | 59791 |
| 75 | Ga0495624_0000242 | 3300046690 | Bacteria | 42945 |
| 76 | Ga0495624_0049705 | 3300046690 | Unclassified | 2658 |
| 77 | Ga0495600_0005186 | 3300046809 | Bacteria | 7833 |
| 78 | Ga0495604_0011623 | 3300047317 | Bacteria | 6999 |
| 79 | Ga0495680_0000896 | 3300047322 | Bacteria | 33084 |
| 80 | Ga0495686_0011918 | 3300047472 | Bacteria | 6110 |
| 81 | Ga0496100_0025967 | 3300048903 | Bacteria | 3586 |
| 82 | Ga0496101_0034239 | 3300048904 | Bacteria | 3586 |
| 83 | Ga0496104_0000025 | 3300048907 | Bacteria | 228519 |
| 84 | Ga0496104_0019620 | 3300048907 | Bacteria | 6189 |
| 85 | Ga0496105_0000427 | 3300048908 | Bacteria | 27638 |
| 86 | Ga0496106_0038650 | 3300048909 | Bacteria | 3572 |
| 87 | Ga0496107_0022588 | 3300048910 | Bacteria | 4444 |
| 88 | Ga0496108_0215442 | 3300048911 | Bacteria | 1667 |
| 89 | Ga0496109_0033615 | 3300048912 | Bacteria | 4613 |
| 90 | Ga0496110_0008961 | 3300048913 | Bacteria | 8070 |
| 91 | Ga0496111_0011327 | 3300048914 | Bacteria | 6002 |
| 92 | Ga0496114_0004647 | 3300048917 | Bacteria | 10674 |
| 93 | Ga0496119_0009408 | 3300048922 | Bacteria | 8393 |
| 94 | Ga0496121_0007037 | 3300048924 | Bacteria | 13662 |
| 95 | Ga0496125_0007694 | 3300048928 | Bacteria | 11418 |
| 96 | Ga0501035_0527256 | 3300049822 | Bacteria | 970 |
| 97 | nmdc:mga0n895_83817_c1 | 3300050512 | Unclassified | 3180 |
| 98 | Ga0495612_0062134 | 3300053078 | Bacteria | 1548 |
| 99 | Ga0587073_0012639 | 3300059492 | Bacteria | 1468 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300049822 | Ga0501035_0527256 | Ga0501035_0527256_164_886 | 231 |
| 2 | 3300048907 | Ga0496104_0019620 | Ga0496104_0019620_4307_5182 | 248 |
| 3 | 3300048922 | Ga0496119_0009408 | Ga0496119_0009408_2852_3727 | 248 |
| 4 | 3300048924 | Ga0496121_0007037 | Ga0496121_0007037_3654_4529 | 248 |
| 5 | 3300014968 | Ga0157379_10055075 | Ga0157379_100550754 | 251 |
| 6 | 3300046529 | Ga0495652_0022153 | Ga0495652_0022153_705_1592 | 253 |
| 7 | 3300059492 | Ga0587073_0012639 | Ga0587073_0012639_534_1421 | 254 |
| 8 | 3300005937 | Ga0081455_10009421 | Ga0081455_1000942111 | 267 |
| 9 | 3300006871 | Ga0075434_100053785 | Ga0075434_1000537855 | 267 |
| 10 | 3300046522 | Ga0495643_0008078 | Ga0495643_0008078_3831_4676 | 267 |
| 11 | 3300046690 | Ga0495624_0049705 | Ga0495624_0049705_1570_2415 | 267 |
| 12 | 3300050512 | nmdc:mga0n895_83817_c1 | nmdc:mga0n895_83817_c1_1934_2833 | 267 |
| 13 | 3300046690 | Ga0495624_0000095 | Ga0495624_0000095_47061_47966 | 270 |
| 14 | 3300013104 | Ga0157370_10055671 | Ga0157370_100556714 | 271 |
| 15 | 3300013296 | Ga0157374_10003102 | Ga0157374_100031022 | 271 |
| 16 | 3300009553 | Ga0105249_10036017 | Ga0105249_100360172 | 273 |
| 17 | 3300041512 | Ga0451853_2233331 | Ga0451853_2233331_2163_3020 | 273 |
| 18 | 3300047472 | Ga0495686_0011918 | Ga0495686_0011918_1750_2619 | 274 |
| 19 | 3300005614 | Ga0068856_100002767 | Ga0068856_1000027678 | 275 |
| 20 | 3300026078 | Ga0207702_10002066 | Ga0207702_1000206610 | 275 |
| 21 | 3300046517 | Ga0495630_0015209 | Ga0495630_0015209_2608_3483 | 275 |
| 22 | 3300048903 | Ga0496100_0025967 | Ga0496100_0025967_2445_3344 | 275 |
| 23 | 3300048904 | Ga0496101_0034239 | Ga0496101_0034239_243_1142 | 275 |
| 24 | 3300048909 | Ga0496106_0038650 | Ga0496106_0038650_2431_3330 | 275 |
| 25 | 3300048910 | Ga0496107_0022588 | Ga0496107_0022588_2445_3344 | 275 |
| 26 | 3300009098 | Ga0105245_10001002 | Ga0105245_1000100211 | 276 |
| 27 | 3300046690 | Ga0495624_0000242 | Ga0495624_0000242_34054_34926 | 276 |
| 28 | 3300013296 | Ga0157374_10067335 | Ga0157374_100673352 | 277 |
| 29 | 3300046458 | Ga0495591_016030 | Ga0495591_016030_913_1827 | 277 |
| 30 | 3300013296 | Ga0157374_10000200 | Ga0157374_1000020031 | 278 |
| 31 | 3300013308 | Ga0157375_10010760 | Ga0157375_100107603 | 278 |
| 32 | 3300014969 | Ga0157376_10031719 | Ga0157376_100317194 | 278 |
| 33 | 3300046679 | Ga0495623_0075771 | Ga0495623_0075771_518_1390 | 278 |
| 34 | 3300046809 | Ga0495600_0005186 | Ga0495600_0005186_2352_3251 | 278 |
| 35 | 3300048913 | Ga0496110_0008961 | Ga0496110_0008961_6520_7389 | 278 |
| 36 | 3300048914 | Ga0496111_0011327 | Ga0496111_0011327_482_1351 | 278 |
| 37 | 3300053078 | Ga0495612_0062134 | Ga0495612_0062134_106_978 | 278 |
| 38 | 3300005455 | Ga0070663_100068254 | Ga0070663_1000682542 | 279 |
| 39 | 3300009098 | Ga0105245_10040684 | Ga0105245_100406842 | 279 |
| 40 | 3300025927 | Ga0207687_10013205 | Ga0207687_100132052 | 279 |
| 41 | 3300026067 | Ga0207678_10019701 | Ga0207678_100197012 | 279 |
| 42 | 3300048917 | Ga0496114_0004647 | Ga0496114_0004647_3088_3984 | 279 |
| 43 | 3300009098 | Ga0105245_10010514 | Ga0105245_100105144 | 280 |
| 44 | 3300025927 | Ga0207687_10004935 | Ga0207687_100049353 | 280 |
| 45 | 3300025961 | Ga0207712_10038068 | Ga0207712_100380682 | 282 |
| 46 | 3300046475 | Ga0495639_0172485 | Ga0495639_0172485_42_926 | 282 |
| 47 | 3300004798 | Ga0058859_11640198 | Ga0058859_116401982 | 283 |
| 48 | 3300005329 | Ga0070683_100002405 | Ga0070683_1000024059 | 283 |
| 49 | 3300005329 | Ga0070683_100007199 | Ga0070683_1000071993 | 283 |
| 50 | 3300005333 | Ga0070677_10001544 | Ga0070677_100015443 | 283 |
| 51 | 3300005455 | Ga0070663_100173615 | Ga0070663_1001736152 | 283 |
| 52 | 3300005458 | Ga0070681_10124235 | Ga0070681_101242352 | 283 |
| 53 | 3300005530 | Ga0070679_100533476 | Ga0070679_1005334761 | 283 |
| 54 | 3300005535 | Ga0070684_100059489 | Ga0070684_1000594892 | 283 |
| 55 | 3300005535 | Ga0070684_100143590 | Ga0070684_1001435902 | 283 |
| 56 | 3300005548 | Ga0070665_100000040 | Ga0070665_100000040295 | 283 |
| 57 | 3300005548 | Ga0070665_100044827 | Ga0070665_1000448272 | 283 |
| 58 | 3300005578 | Ga0068854_100291788 | Ga0068854_1002917882 | 283 |
| 59 | 3300005718 | Ga0068866_10009762 | Ga0068866_100097622 | 283 |
| 60 | 3300005842 | Ga0068858_100001457 | Ga0068858_1000014572 | 283 |
| 61 | 3300005842 | Ga0068858_100038412 | Ga0068858_1000384122 | 283 |
| 62 | 3300006237 | Ga0097621_100087854 | Ga0097621_1000878542 | 283 |
| 63 | 3300009176 | Ga0105242_10036439 | Ga0105242_100364393 | 283 |
| 64 | 3300009551 | Ga0105238_10576665 | Ga0105238_105766652 | 283 |
| 65 | 3300009553 | Ga0105249_10055391 | Ga0105249_100553914 | 283 |
| 66 | 3300020070 | Ga0206356_10897571 | Ga0206356_108975712 | 283 |
| 67 | 3300020070 | Ga0206356_11876133 | Ga0206356_118761331 | 283 |
| 68 | 3300020078 | Ga0206352_10325691 | Ga0206352_103256912 | 283 |
| 69 | 3300025893 | Ga0207682_10003115 | Ga0207682_100031153 | 283 |
| 70 | 3300025912 | Ga0207707_10045223 | Ga0207707_100452232 | 283 |
| 71 | 3300025917 | Ga0207660_10025114 | Ga0207660_100251142 | 283 |
| 72 | 3300025921 | Ga0207652_10029613 | Ga0207652_100296131 | 283 |
| 73 | 3300025924 | Ga0207694_10002951 | Ga0207694_100029513 | 283 |
| 74 | 3300025924 | Ga0207694_10002951 | Ga0207694_100029517 | 283 |
| 75 | 3300025927 | Ga0207687_10000079 | Ga0207687_1000007960 | 283 |
| 76 | 3300025934 | Ga0207686_10016979 | Ga0207686_100169793 | 283 |
| 77 | 3300025944 | Ga0207661_10001783 | Ga0207661_100017839 | 283 |
| 78 | 3300025944 | Ga0207661_10007650 | Ga0207661_100076503 | 283 |
| 79 | 3300025961 | Ga0207712_10030402 | Ga0207712_100304022 | 283 |
| 80 | 3300025981 | Ga0207640_10055128 | Ga0207640_100551282 | 283 |
| 81 | 3300026035 | Ga0207703_10000078 | Ga0207703_100000783 | 283 |
| 82 | 3300026035 | Ga0207703_10002924 | Ga0207703_100029244 | 283 |
| 83 | 3300026067 | Ga0207678_10021380 | Ga0207678_100213802 | 283 |
| 84 | 3300028379 | Ga0268266_10000045 | Ga0268266_10000045296 | 283 |
| 85 | 3300028379 | Ga0268266_10019170 | Ga0268266_100191704 | 283 |
| 86 | 3300035120 | Ga0373957_0008772 | Ga0373957_0008772_269_1168 | 283 |
| 87 | 3300035172 | Ga0373955_0023465 | Ga0373955_0023465_239_1138 | 283 |
| 88 | 3300036401 | Ga0373937_0042149 | Ga0373937_0042149_3206_4105 | 283 |
| 89 | 3300046678 | Ga0495599_0005998 | Ga0495599_0005998_2611_3498 | 283 |
| 90 | 3300046679 | Ga0495623_0051244 | Ga0495623_0051244_1469_2368 | 283 |
| 91 | 3300046679 | Ga0495623_0120351 | Ga0495623_0120351_75_965 | 283 |
| 92 | 3300046681 | Ga0495647_0000021 | Ga0495647_0000021_61410_62324 | 283 |
| 93 | 3300046684 | Ga0495669_0013353 | Ga0495669_0013353_2428_3315 | 283 |
| 94 | 3300047317 | Ga0495604_0011623 | Ga0495604_0011623_3127_4026 | 283 |
| 95 | 3300047322 | Ga0495680_0000896 | Ga0495680_0000896_24419_25306 | 283 |
| 96 | 3300047322 | Ga0495680_0000896 | Ga0495680_0000896_7735_8619 | 283 |
| 97 | 3300048907 | Ga0496104_0000025 | Ga0496104_0000025_160839_161738 | 283 |
| 98 | 3300048907 | Ga0496104_0000025 | Ga0496104_0000025_175996_176895 | 283 |
| 99 | 3300048908 | Ga0496105_0000427 | Ga0496105_0000427_22822_23721 | 283 |
| 100 | 3300048908 | Ga0496105_0000427 | Ga0496105_0000427_7665_8564 | 283 |
| 101 | 3300048911 | Ga0496108_0215442 | Ga0496108_0215442_653_1552 | 283 |
| 102 | 3300048912 | Ga0496109_0033615 | Ga0496109_0033615_3062_3961 | 283 |
| 103 | 3300048928 | Ga0496125_0007694 | Ga0496125_0007694_3645_4544 | 283 |
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2z69-assembly2.cif.gz_C-2 | crystal structure of the sensor domain of the transcriptional regulator dnr from pseudomonas aeruginosa | 0.5517 | 254 | 283 |
| 6wel-assembly1.cif.gz_A | structure of cgmp-unbound f403v/v407a mutant tax-4 reconstituted in lipid nanodiscs | 0.4251 | 251 | 281 |
| 7y5e-assembly1.cif.gz_OL | in situ single-pbs-psii-psi-lhcs megacomplex. | 0.3423 | 35 | 271 |
| 4yuu-assembly4.cif.gz_o2 | crystal structure of oxygen-evolving photosystem ii from a red alga | 0.3077 | 5 | 271 |
| 4o4u-assembly2.cif.gz_B | crystal structure of the vaccine antigen transferrin binding protein b (tbpb) mutant trp-176-ala from haemophilus parasuis hp5 | 0.3043 | 29 | 271 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P63201_1_133_2.60.120.10 | Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls | 0.4086 | 35 | 66 | 2.60.120.10 |
| af_P9WNS9_1_143_3.50.80.10 | Alpha Beta;3-Layer(bba) Sandwich;D-tyrosyl-trna(Tyr) Deacylase; Chain: A;;D-tyrosyl-tRNA(Tyr) deacylase | 0.3757 | 38 | 66 | 3.50.80.10 |
| af_Q0JHU5_2_156_2.60.40.150 | Mainly Beta;Sandwich;Immunoglobulin-like;C2 domain | 0.3393 | 38 | 271 | 2.60.40.150 |
| af_P9WM61_379_495_2.60.120.10 | Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls | 0.3366 | 255 | 281 | 2.60.120.10 |
| 2f1tA00 | Mainly Beta;Beta Barrel;Porin; | 0.3163 | 37 | 269 | 2.40.160.20 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A1M3BI04-F1-model_v4 | Uncharacterized protein | 0.9228 | 65 | 277 |
|
| AF-A0A7W1RAX8-F1-model_v4 | CHRD domain-containing protein | 0.9131 | 1 | 277 |
|
| AF-A0A1M3BI04-F1-model_v4 | Uncharacterized protein | 0.9019 | 65 | 277 |
|
| AF-H0EBW5-F1-model_v4 | Putative secreted protein | 0.8973 | 46 | 277 |
|
| AF-A0A7W1RAX8-F1-model_v4 | CHRD domain-containing protein | 0.8912 | 1 | 277 |
|
Predicted Structure (AlphaFold2)
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