F020914

General Info

Members Datasets Scaffolds Average Seq Length
103 81 99 338

Family's Representative Sequence

Representative Sequence 3300014325|Ga0163163_10492406|Ga0163163_104924061
Length 389
Sequence MFSQLIFFFPPDIGLITNNIFKPAGFSIISFRFPIDEILKLKHKEKKLSLFIRIKQKMLLLFRLDHHPVIKVYNGYGSSEKVIAFGHVLALSPMLRKTYRQNWIINIFSMLRLFMVKPYKFANLSMEWEGSVLHSQSQDDGFFKFEWAPLIPPKPGWHTIVIHLEENKYHSRKISATGQVHIPFNSTHAFVSDIDDTFLISYSSRIRKRLYVLLTKNARSRKPFAGVVNHYQLLAASAQKEHASNPFFYVSSSEWNLFDFIQEFSRKNGLPKGVYLLNELKKFRDVLRTGQNKHATKFIRIVRIIEAYPHLRFVLFGDDSQEDPHIYSALVDHFADKIFAVYIRRVHRKKYARVQKVVDKITAAGSHCCYFIHSEEAIAHSKSIGLIIS

Samples

Sample ID Description Type Environment
1 2738541278 Niastella sp. CF465 Isolate Unclassified
2 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
3 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
4 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
9 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
10 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
11 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
12 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
13 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
14 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
15 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
16 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
17 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
21 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
22 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
23 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
24 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
25 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
26 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
27 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
28 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
29 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
30 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
31 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
32 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
33 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
34 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
35 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
36 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
37 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
38 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
39 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
40 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
41 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
42 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
44 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
53 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
54 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
55 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
56 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
57 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
58 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
59 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
60 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
61 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
62 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
63 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
64 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
65 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
66 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
67 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
68 3300049673 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_A_3_drought Metagenome Rhizosphere
69 3300049674 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought Metagenome Rhizosphere
70 3300049680 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_B_3_drought Metagenome Rhizosphere
71 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
72 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
73 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
74 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
75 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
76 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
77 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
78 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
79 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
80 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
81 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.12
Metatranscriptomes 0
Isolates 3.88

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.48
Nodule 0
Rhizoplane 0
Rhizosphere 71.84
Stem 0
Stem Tuber 0
Unclassified 10.68

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10271525 3300003320 Bacteria 2147
2 rootL2_10027239 3300003322 Bacteria 2460
3 rootL2_10099954 3300003322 Bacteria 6594
4 rootL2_10121844 3300003322 Bacteria 6293
5 rootH1_10006403 3300003323 Bacteria 91171
6 rootH1_10026473 3300003323 Bacteria 6504
7 rootH1_10124996 3300003323 Bacteria 10534
8 rootH1_10180786 3300003323 Bacteria 1321
9 JGI25160J50197_1000735 3300003354 Bacteria 17879
10 Ga0055528_1001241 3300003790 Bacteria 16212
11 Ga0055530_10001539 3300003791 Bacteria 16575
12 Ga0065165_1000525 3300005262 Bacteria 58607
13 Ga0065714_10008930 3300005288 Bacteria 4379
14 Ga0070676_10104377 3300005328 Bacteria 1756
15 Ga0070670_100128497 3300005331 Bacteria 2187
16 Ga0070677_10049669 3300005333 Bacteria 1690
17 Ga0068869_100034625 3300005334 Bacteria 3574
18 Ga0068869_100080504 3300005334 Unclassified 2430
19 Ga0070668_100087888 3300005347 Unclassified 2446
20 Ga0070659_100066511 3300005366 Unclassified 2856
21 Ga0068867_100110676 3300005459 Unclassified 2110
22 Ga0068863_100078606 3300005841 Bacteria 3124
23 Ga0068860_100006633 3300005843 Bacteria 11624
24 Ga0068862_100003648 3300005844 Bacteria 13173
25 Ga0075431_100002821 3300006847 Bacteria 16817
26 Ga0075429_100039294 3300006880 Bacteria 4119
27 Ga0105242_10170948 3300009176 Unclassified 1910
28 Ga0105237_10138922 3300009545 Bacteria 2424
29 Ga0105249_10273404 3300009553 Unclassified 1684
30 Ga0157373_10009662 3300013100 Bacteria 7119
31 Ga0157373_10010987 3300013100 Bacteria 6667
32 Ga0157371_10231740 3300013102 Bacteria 1327
33 Ga0157370_10412666 3300013104 Unclassified 1242
34 Ga0157369_10182231 3300013105 Unclassified 2209
35 Ga0157369_10306243 3300013105 Bacteria 1652
36 Ga0157369_10352050 3300013105 Unclassified 1530
37 Ga0157372_10026429 3300013307 Bacteria 6317
38 Ga0157372_10027706 3300013307 Bacteria 6174
39 Ga0157372_10069553 3300013307 Bacteria 3959
40 Ga0157372_10186974 3300013307 Bacteria 2399
41 Ga0157372_10225337 3300013307 Bacteria 2173
42 Ga0157372_10252489 3300013307 Bacteria 2047
43 Ga0157372_10376333 3300013307 Bacteria 1655
44 Ga0163163_10492406 3300014325 Bacteria 1287
45 Ga0157380_10003364 3300014326 Bacteria 10973
46 Ga0157380_10320902 3300014326 Bacteria 1436
47 Ga0182008_10076921 3300014497 Bacteria 1642
48 Ga0157379_10212519 3300014968 Bacteria 1751
49 Ga0182007_10002472 3300015262 Bacteria 9165
50 Ga0182007_10011646 3300015262 Unclassified 3418
51 Ga0163161_10223226 3300017792 Bacteria 1460
52 Ga0209673_1000014 3300025273 Bacteria 537082
53 Ga0209673_1000018 3300025273 Bacteria 458281
54 Ga0209564_1003450 3300025295 Bacteria 10806
55 Ga0209564_1005955 3300025295 Bacteria 6749
56 Ga0209758_1011956 3300025297 Unclassified 4935
57 Ga0209050_1000750 3300025298 Bacteria 46636
58 Ga0207426_1000612 3300025302 Bacteria 46054
59 Ga0209257_1003521 3300025304 Bacteria 13314
60 Ga0207642_10062332 3300025899 Unclassified 1739
61 Ga0207690_10004500 3300025932 Bacteria 8233
62 Ga0207640_10093000 3300025981 Unclassified 2094
63 Ga0207641_10534712 3300026088 Bacteria 1141
64 Ga0207648_10002267 3300026089 Bacteria 20821
65 Ga0207648_10018805 3300026089 Bacteria 6245
66 Ga0207675_100269325 3300026118 Bacteria 1653
67 Ga0268264_10023305 3300028381 Bacteria 5050
68 Ga0307414_10005507 3300032004 Bacteria 6980
69 Ga0395900_0052118 3300037418 Unclassified 4213
70 Ga0395905_0040648 3300037471 Bacteria 4363
71 Ga0395905_0090017 3300037471 Unclassified 2876
72 Ga0439436_0005847 3300041404 Bacteria 3772
73 Ga0439439_0033858 3300041406 Bacteria 1309
74 Ga0439449_0010739 3300042007 Bacteria 3458
75 Ga0439457_001320 3300042014 Bacteria 7437
76 Ga0495643_0048172 3300046522 Unclassified 2305
77 Ga0495668_0000321 3300046616 Bacteria 65700
78 Ga0495668_0002200 3300046616 Bacteria 16616
79 Ga0495672_0012851 3300047320 Bacteria 5812
80 Ga0501033_0027129 3300049570 Bacteria 4309
81 Ga0501034_0009088 3300049571 Bacteria 10437
82 Ga0501036_0112386 3300049572 Bacteria 2302
83 Ga0501037_0030974 3300049573 Bacteria 3951
84 Ga0501043_0012074 3300049579 Bacteria 6756
85 Ga0501047_0068137 3300049581 Bacteria 3428
86 Ga0501240_004540 3300049673 Bacteria 1618
87 Ga0501242_002269 3300049674 Bacteria 2009
88 Ga0501250_000630 3300049680 Unclassified 2501
89 Ga0501225_0002771 3300049705 Bacteria 5380
90 Ga0501035_0018244 3300049822 Bacteria 6464
91 Ga0501044_0066761 3300049823 Bacteria 3666
92 nmdc:mga09592_5087_c2 3300050508 Bacteria 4240
93 nmdc:mga06r32_7936_c1 3300050510 Bacteria 9541
94 Ga0500559_0018055 3300053136 Unclassified 2982
95 Ga0500568_0003777 3300053139 Bacteria 8289
96 Ga0500604_0005914 3300053151 Unclassified 3233
97 Ga0500616_0008434 3300053153 Bacteria 6402
98 Ga0500622_0000688 3300053156 Bacteria 29897
99 Ga0500627_0001775 3300053158 Bacteria 6127

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046522 Ga0495643_0048172 Ga0495643_0048172_1456_2292 278
2 3300053158 Ga0500627_0001775 Ga0500627_0001775_3789_4781 312
3 3300053153 Ga0500616_0008434 Ga0500616_0008434_3339_4340 313
4 iso_pu_bacteria 2738541278 2738728379 314
5 3300003323 rootH1_10006403 rootH1_1000640357 318
6 3300041404 Ga0439436_0005847 Ga0439436_0005847_2796_3752 318
7 3300041406 Ga0439439_0033858 Ga0439439_0033858_276_1232 318
8 3300042007 Ga0439449_0010739 Ga0439449_0010739_2401_3357 318
9 3300042014 Ga0439457_001320 Ga0439457_001320_1780_2736 318
10 3300049572 Ga0501036_0112386 Ga0501036_0112386_22_978 318
11 3300049705 Ga0501225_0002771 Ga0501225_0002771_3994_4950 318
12 3300049823 Ga0501044_0066761 Ga0501044_0066761_480_1436 318
13 3300014497 Ga0182008_10076921 Ga0182008_100769212 319
14 3300015262 Ga0182007_10002472 Ga0182007_100024723 319
15 3300015262 Ga0182007_10011646 Ga0182007_100116463 319
16 3300047320 Ga0495672_0012851 Ga0495672_0012851_3477_4445 322
17 3300053139 Ga0500568_0003777 Ga0500568_0003777_2538_3506 322
18 3300003322 rootL2_10027239 rootL2_100272393 323
19 3300005334 Ga0068869_100080504 Ga0068869_1000805042 323
20 3300005347 Ga0070668_100087888 Ga0070668_1000878883 323
21 3300009176 Ga0105242_10170948 Ga0105242_101709482 323
22 3300025899 Ga0207642_10062332 Ga0207642_100623322 323
23 3300026089 Ga0207648_10002267 Ga0207648_1000226719 323
24 3300026118 Ga0207675_100269325 Ga0207675_1002693252 323
25 3300005288 Ga0065714_10008930 Ga0065714_100089305 324
26 3300013100 Ga0157373_10009662 Ga0157373_100096625 324
27 3300032004 Ga0307414_10005507 Ga0307414_100055074 324
28 3300005333 Ga0070677_10049669 Ga0070677_100496692 325
29 3300014326 Ga0157380_10003364 Ga0157380_100033649 325
30 3300014326 Ga0157380_10320902 Ga0157380_103209022 325
31 3300017792 Ga0163161_10223226 Ga0163161_102232262 325
32 3300046616 Ga0495668_0002200 Ga0495668_0002200_1269_2246 325
33 3300053151 Ga0500604_0005914 Ga0500604_0005914_418_1395 325
34 iso_pu_bacteria 2911138879 2911140404 328
35 3300003322 rootL2_10121844 rootL2_101218446 329
36 3300006847 Ga0075431_100002821 Ga0075431_1000028211 329
37 3300013102 Ga0157371_10231740 Ga0157371_102317401 329
38 3300013307 Ga0157372_10225337 Ga0157372_102253372 329
39 iso_pu_bacteria 2929154850 2929156592 329
40 3300003323 rootH1_10026473 rootH1_100264733 330
41 3300005334 Ga0068869_100034625 Ga0068869_1000346252 331
42 3300005843 Ga0068860_100006633 Ga0068860_1000066336 331
43 3300005844 Ga0068862_100003648 Ga0068862_10000364810 331
44 3300028381 Ga0268264_10023305 Ga0268264_100233054 331
45 3300003322 rootL2_10099954 rootL2_100999543 332
46 3300003323 rootH1_10124996 rootH1_101249969 332
47 3300005328 Ga0070676_10104377 Ga0070676_101043772 333
48 3300005841 Ga0068863_100078606 Ga0068863_1000786064 333
49 3300026088 Ga0207641_10534712 Ga0207641_105347121 333
50 3300053156 Ga0500622_0000688 Ga0500622_0000688_10340_11350 333
51 3300003323 rootH1_10180786 rootH1_101807861 334
52 3300014968 Ga0157379_10212519 Ga0157379_102125192 336
53 3300005366 Ga0070659_100066511 Ga0070659_1000665113 337
54 3300025932 Ga0207690_10004500 Ga0207690_100045005 337
55 3300009545 Ga0105237_10138922 Ga0105237_101389222 339
56 3300013100 Ga0157373_10010987 Ga0157373_100109872 339
57 3300013307 Ga0157372_10376333 Ga0157372_103763332 339
58 3300013307 Ga0157372_10027706 Ga0157372_100277063 340
59 3300009553 Ga0105249_10273404 Ga0105249_102734041 341
60 3300049673 Ga0501240_004540 Ga0501240_004540_468_1532 342
61 3300049674 Ga0501242_002269 Ga0501242_002269_426_1490 342
62 3300013307 Ga0157372_10186974 Ga0157372_101869743 343
63 3300013307 Ga0157372_10252489 Ga0157372_102524892 343
64 3300013104 Ga0157370_10412666 Ga0157370_104126661 344
65 3300013105 Ga0157369_10182231 Ga0157369_101822312 344
66 3300013307 Ga0157372_10069553 Ga0157372_100695534 344
67 3300037418 Ga0395900_0052118 Ga0395900_0052118_1923_2993 344
68 3300037471 Ga0395905_0040648 Ga0395905_0040648_1871_2941 344
69 3300037471 Ga0395905_0090017 Ga0395905_0090017_135_1205 344
70 3300049680 Ga0501250_000630 Ga0501250_000630_630_1700 344
71 iso_pu_bacteria 2884791551 2884793115 344
72 3300003354 JGI25160J50197_1000735 JGI25160J50197_10007354 347
73 3300003790 Ga0055528_1001241 Ga0055528_100124117 347
74 3300003791 Ga0055530_10001539 Ga0055530_100015394 347
75 3300005262 Ga0065165_1000525 Ga0065165_100052522 347
76 3300025273 Ga0209673_1000014 Ga0209673_1000014300 347
77 3300025273 Ga0209673_1000018 Ga0209673_1000018248 347
78 3300025295 Ga0209564_1003450 Ga0209564_10034509 347
79 3300025295 Ga0209564_1005955 Ga0209564_10059554 347
80 3300025297 Ga0209758_1011956 Ga0209758_10119563 347
81 3300025298 Ga0209050_1000750 Ga0209050_100075024 347
82 3300025302 Ga0207426_1000612 Ga0207426_100061216 347
83 3300025304 Ga0209257_1003521 Ga0209257_10035218 347
84 3300049570 Ga0501033_0027129 Ga0501033_0027129_943_1986 347
85 3300049571 Ga0501034_0009088 Ga0501034_0009088_5399_6442 347
86 3300049573 Ga0501037_0030974 Ga0501037_0030974_1766_2809 347
87 3300049579 Ga0501043_0012074 Ga0501043_0012074_4029_5072 347
88 3300049581 Ga0501047_0068137 Ga0501047_0068137_1832_2875 347
89 3300049822 Ga0501035_0018244 Ga0501035_0018244_2143_3186 347
90 3300025981 Ga0207640_10093000 Ga0207640_100930002 348
91 3300053136 Ga0500559_0018055 Ga0500559_0018055_1140_2201 350
92 3300013105 Ga0157369_10306243 Ga0157369_103062432 352
93 3300013307 Ga0157372_10026429 Ga0157372_100264292 352
94 3300005459 Ga0068867_100110676 Ga0068867_1001106762 353
95 3300014325 Ga0163163_10492406 Ga0163163_104924061 353
96 3300026089 Ga0207648_10018805 Ga0207648_100188054 353
97 3300046616 Ga0495668_0000321 Ga0495668_0000321_29228_30292 353
98 3300013105 Ga0157369_10352050 Ga0157369_103520502 354
99 3300003320 rootH2_10271525 rootH2_102715252 355
100 3300005331 Ga0070670_100128497 Ga0070670_1001284971 355
101 3300006880 Ga0075429_100039294 Ga0075429_1000392942 355
102 3300050508 nmdc:mga09592_5087_c2 nmdc:mga09592_5087_c2_450_1517 355
103 3300050510 nmdc:mga06r32_7936_c1 nmdc:mga06r32_7936_c1_5611_6678 355

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09949

APP1_cat

Phosphatidate phosphatase APP1, catalytic domain

188

345

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
4xrp-assembly1.cif.gz_D structure of the pnkp1/rnl/hen1 rna repair complex 0.7067 154 301
4fyp-assembly1.cif.gz_B crystal structure of plant vegetative storage protein 0.6826 153 286
5thk-assembly2.cif.gz_G crystal structure of a putative dehydrogenase from burkholderia cenocepacia with bound nadp 0.6805 279 352
8hfw-assembly1.cif.gz_B the crystal structure of alpha/beta fold hydrolase 0.676 261 311
1jzt-assembly1.cif.gz_A crystal structure of yeast ynu0, ynl200c 0.6704 269 347
ID Description Score Start End Superfamily
af_Q9HGP1_1_605_2.60.40.2240 Mainly Beta;Sandwich;Immunoglobulin-like;Acyl-CoA thioester hydrolase/BAAT N-terminal domain 0.7995 68 327 2.60.40.2240
af_P53933_1_587_3.40.50.1000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.7615 12 311 3.40.50.1000
af_Q3UHE1_742_841_3.40.50.1000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.745 161 273 3.40.50.1000
af_A0A0R4ILR6_688_823_3.40.50.1000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.7346 154 322 3.40.50.1000
af_A0A0R4ILR6_688_823_3.40.50.1000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.7205 154 322 3.40.50.1000
ID Description Score Start End GO Terms
AF-A0A4V2ACY0-F1-model_v4 deleted 0.9731 16 355
AF-A0A7V8W473-F1-model_v4 DUF2183 domain-containing protein 0.9642 25 355 GO:0008195
AF-A0A4Q5VRX7-F1-model_v4 deleted 0.9635 33 355
AF-A0A7V8W473-F1-model_v4 DUF2183 domain-containing protein 0.9585 25 355 GO:0008195
AF-A0A1H4HK13-F1-model_v4 Phosphatidate phosphatase APP1 0.9536 30 355 GO:0008195

Feature Viewer

pLDDT pTM Quality
85 0.84 High
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Predicted Structure (AlphaFold2)

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