F003473

General Info

Members Datasets Scaffolds Average Seq Length
100 78 100 451

Family's Representative Sequence

Representative Sequence 3300025936|Ga0207670_10014867|Ga0207670_100148673
Length 485
Sequence MNRPALLTAATVVGTGLVAAAIGRGIVRKRRAARQRICSEHYPAAECNELHTHKVARVAAQLRAHDSSKPVSLRKHAPPHQVPKGGDLRRRDAKIDVSDLTAIIDVDPMRRLCVAESGVMFCDLVAATLRYGLVPIVVPELATITIGGAVSGCSIESMSYRYGGFHDTCVEYEVVTATGEVLVCRPDNEHALVFQMMHGSFGTLGILTKLTFRLVPAQPFVRVDYEKYDTLDAYQAAIRRHFDAEDVDFMDGIIHRPDLFVLSVGRFVDRAPYTHRYDWTRVYYQSTAALDHDYLATPDYFFRYDRGVTNVHPKSFLGRLLLGKLMGSGTTLRLADKLNFLFKSERPTVIVDVFLPFSQAPAFLAWWERELGHFPLWMVPYKRVHDYEWLDDSFYARMEDELFLDLAIYGMKQPPGKNVHRMIEEKLRELGGIKTLISHNYYSRDEFWSIWNKRNYDRVKAITDPSNVFRDLYAKTCRAAMGLPG

Samples

Sample ID Description Type Environment
1 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
2 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
3 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
4 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
5 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
6 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
7 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
8 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
9 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
10 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
11 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
12 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
13 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
14 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
15 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
16 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
17 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
18 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
19 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
20 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
26 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
30 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
31 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
32 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
33 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
34 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
35 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
36 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
37 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
38 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
39 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
40 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
41 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
42 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
43 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
44 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
45 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
46 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
47 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
48 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
49 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
50 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
51 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
52 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
53 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
54 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
55 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
56 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
57 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
58 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
59 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
60 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
61 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
62 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
63 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
64 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
65 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
66 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
67 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
68 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
69 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
70 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
71 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
72 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
73 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
74 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
75 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
76 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
77 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
78 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1
Nodule 0
Rhizoplane 4
Rhizosphere 92
Stem 0
Stem Tuber 0
Unclassified 3

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068869_100000641 3300005334 Bacteria 19693
2 Ga0070689_100061832 3300005340 Bacteria 2912
3 Ga0070687_100018025 3300005343 Bacteria 3257
4 Ga0070681_10194972 3300005458 Bacteria 1945
5 Ga0070706_100078608 3300005467 Bacteria 3054
6 Ga0070698_100008636 3300005471 Bacteria 10977
7 Ga0068853_100001827 3300005539 Bacteria 15648
8 Ga0068856_100019188 3300005614 Bacteria 6638
9 Ga0068859_100087108 3300005617 Bacteria 3170
10 Ga0081455_10063874 3300005937 Unclassified 3087
11 Ga0070717_10011321 3300006028 Bacteria 6770
12 Ga0097620_100087103 3300006931 Bacteria 3170
13 Ga0111539_10121173 3300009094 Bacteria 3065
14 Ga0105242_10044791 3300009176 Bacteria 3584
15 Ga0105242_10100314 3300009176 Bacteria 2452
16 Ga0105237_10000315 3300009545 Bacteria 67677
17 Ga0105249_10048511 3300009553 Unclassified 3871
18 Ga0105239_10286159 3300010375 Unclassified 1856
19 Ga0157374_10008435 3300013296 Bacteria 8805
20 Ga0213876_10034231 3300021384 Bacteria 2679
21 Ga0207671_10000527 3300025914 Bacteria 51567
22 Ga0207662_10034849 3300025918 Bacteria 2938
23 Ga0207686_10091974 3300025934 Bacteria 2005
24 Ga0207670_10006420 3300025936 Bacteria 6517
25 Ga0207670_10014867 3300025936 Bacteria 4634
26 Ga0207689_10004798 3300025942 Bacteria 12195
27 Ga0207641_10095027 3300026088 Bacteria 2615
28 Ga0207648_10038915 3300026089 Bacteria 4183
29 Ga0207683_10002280 3300026121 Bacteria 16817
30 Ga0268264_10006995 3300028381 Bacteria 9468
31 Ga0307509_10007461 3300031507 Bacteria 14279
32 Ga0316576_10000371 3300031727 Bacteria 20393
33 Ga0316576_10003365 3300031727 Bacteria 9350
34 Ga0316577_10009180 3300031733 Bacteria 5316
35 Ga0373950_0000007 3300034818 Bacteria 392070
36 Ga0373950_0000033 3300034818 Bacteria 145634
37 Ga0373936_0000026 3300035113 Bacteria 120567
38 Ga0373956_0037362 3300035119 Unclassified 2147
39 Ga0373961_0000028 3300035241 Bacteria 94923
40 Ga0373933_0023396 3300035724 Unclassified 3529
41 Ga0373933_0062363 3300035724 Bacteria 2251
42 Ga0316584_0000072 3300036712 Bacteria 40616
43 Ga0316584_0000798 3300036712 Bacteria 17741
44 Ga0316584_0075311 3300036712 Bacteria 2530
45 Ga0395899_0028133 3300037312 Bacteria 4233
46 Ga0436365_0181540 3300039437 Bacteria 5436
47 Ga0451577_0026473 3300042876 Bacteria 5253
48 Ga0453683_0000337 3300044673 Bacteria 57114
49 Ga0453683_0051880 3300044673 Bacteria 2568
50 Ga0453684_0002700 3300044712 Bacteria 42106
51 Ga0453684_0031827 3300044712 Bacteria 7399
52 Ga0453684_0143263 3300044712 Unclassified 2850
53 Ga0451576_0000780 3300045051 Bacteria 62647
54 Ga0495630_0014770 3300046517 Bacteria 5694
55 Ga0495586_0012377 3300046535 Unclassified 4525
56 Ga0495604_0064243 3300047317 Unclassified 2798
57 Ga0495686_0065635 3300047472 Bacteria 2243
58 Ga0496103_0129465 3300048906 Bacteria 1611
59 Ga0496104_0060248 3300048907 Bacteria 3596
60 Ga0496104_0114478 3300048907 Bacteria 2587
61 Ga0496114_0196962 3300048917 Bacteria 1763
62 Ga0501298_007036 3300049521 Bacteria 1857
63 Ga0501034_0001035 3300049571 Bacteria 39786
64 Ga0501034_0055701 3300049571 Bacteria 3979
65 Ga0501034_0152625 3300049571 Bacteria 2285
66 Ga0501036_0091140 3300049572 Unclassified 2575
67 Ga0501038_0100609 3300049574 Unclassified 2408
68 Ga0501043_0007254 3300049579 Bacteria 8802
69 Ga0501046_0000227 3300049580 Bacteria 58747
70 Ga0501047_0000011 3300049581 Bacteria 409778
71 Ga0501048_0002184 3300049582 Bacteria 14890
72 Ga0501067_0000703 3300049583 Bacteria 18015
73 Ga0501067_0007711 3300049583 Bacteria 5986
74 Ga0501068_0003276 3300049584 Bacteria 8679
75 Ga0501070_0001281 3300049586 Bacteria 22578
76 Ga0501070_0017595 3300049586 Bacteria 6001
77 Ga0501070_0021785 3300049586 Bacteria 5369
78 Ga0501072_0000009 3300049588 Bacteria 206584
79 Ga0501072_0111776 3300049588 Bacteria 2175
80 Ga0501073_0000794 3300049589 Bacteria 22462
81 Ga0501073_0003727 3300049589 Bacteria 11449
82 Ga0501074_0000202 3300049590 Bacteria 32474
83 Ga0501074_0051757 3300049590 Bacteria 2964
84 Ga0501216_000094 3300049660 Bacteria 8523
85 Ga0501227_000797 3300049665 Bacteria 6879
86 Ga0501227_010444 3300049665 Bacteria 2013
87 Ga0501235_010512 3300049669 Bacteria 2023
88 Ga0501221_005648 3300049704 Bacteria 2097
89 Ga0501225_0000274 3300049705 Bacteria 16190
90 Ga0501079_0000138 3300049741 Bacteria 39896
91 Ga0501080_0006026 3300049742 Bacteria 10862
92 Ga0501083_0005029 3300049744 Bacteria 9363
93 Ga0501044_0011675 3300049823 Bacteria 9521
94 nmdc:mga09592_5155_c1 3300050508 Bacteria 10619
95 nmdc:mga08y16_121385_c1 3300050511 Bacteria 2719
96 Ga0500614_018712 3300053123 Bacteria 1578
97 Ga0501084_0000004 3300054114 Bacteria 267128
98 Ga0501082_0001572 3300060353 Bacteria 20128
99 Ga0501082_0034111 3300060353 Bacteria 4390
100 Ga0501082_0038880 3300060353 Unclassified 4104

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300037312 Ga0395899_0028133 Ga0395899_0028133_113_1537 383
2 3300049521 Ga0501298_007036 Ga0501298_007036_628_1842 395
3 3300049665 Ga0501227_010444 Ga0501227_010444_20_1417 395
4 3300048907 Ga0496104_0060248 Ga0496104_0060248_1383_2765 403
5 3300048917 Ga0496114_0196962 Ga0496114_0196962_503_1741 404
6 3300049588 Ga0501072_0111776 Ga0501072_0111776_195_1652 406
7 3300060353 Ga0501082_0038880 Ga0501082_0038880_1730_3187 406
8 3300044712 Ga0453684_0143263 Ga0453684_0143263_1364_2677 413
9 3300049571 Ga0501034_0152625 Ga0501034_0152625_149_1606 419
10 3300009094 Ga0111539_10121173 Ga0111539_101211731 422
11 3300050511 nmdc:mga08y16_121385_c1 nmdc:mga08y16_121385_c1_1354_2646 422
12 3300005467 Ga0070706_100078608 Ga0070706_1000786083 423
13 3300010375 Ga0105239_10286159 Ga0105239_102861592 424
14 3300044712 Ga0453684_0031827 Ga0453684_0031827_2739_4061 424
15 3300005614 Ga0068856_100019188 Ga0068856_1000191888 425
16 3300009176 Ga0105242_10044791 Ga0105242_100447912 425
17 3300025934 Ga0207686_10091974 Ga0207686_100919742 425
18 3300036712 Ga0316584_0000798 Ga0316584_0000798_14062_15447 425
19 3300044673 Ga0453683_0051880 Ga0453683_0051880_1146_2459 425
20 3300009545 Ga0105237_10000315 Ga0105237_1000031558 427
21 3300025914 Ga0207671_10000527 Ga0207671_1000052737 427
22 3300049574 Ga0501038_0100609 Ga0501038_0100609_349_1701 427
23 3300049669 Ga0501235_010512 Ga0501235_010512_19_1329 427
24 3300005343 Ga0070687_100018025 Ga0070687_1000180252 428
25 3300005539 Ga0068853_100001827 Ga0068853_1000018274 428
26 3300025918 Ga0207662_10034849 Ga0207662_100348492 428
27 3300035119 Ga0373956_0037362 Ga0373956_0037362_686_1996 428
28 3300036712 Ga0316584_0075311 Ga0316584_0075311_680_1990 428
29 3300049571 Ga0501034_0055701 Ga0501034_0055701_451_1851 428
30 3300005340 Ga0070689_100061832 Ga0070689_1000618322 429
31 3300005471 Ga0070698_100008636 Ga0070698_1000086365 429
32 3300005937 Ga0081455_10063874 Ga0081455_100638744 429
33 3300009176 Ga0105242_10100314 Ga0105242_101003143 429
34 3300009553 Ga0105249_10048511 Ga0105249_100485113 429
35 3300013296 Ga0157374_10008435 Ga0157374_100084355 429
36 3300021384 Ga0213876_10034231 Ga0213876_100342311 429
37 3300025936 Ga0207670_10006420 Ga0207670_100064205 429
38 3300025936 Ga0207670_10014867 Ga0207670_100148673 429
39 3300026088 Ga0207641_10095027 Ga0207641_100950272 429
40 3300026089 Ga0207648_10038915 Ga0207648_100389153 429
41 3300026121 Ga0207683_10002280 Ga0207683_100022808 429
42 3300028381 Ga0268264_10006995 Ga0268264_100069957 429
43 3300031507 Ga0307509_10007461 Ga0307509_100074613 429
44 3300031727 Ga0316576_10000371 Ga0316576_1000037115 429
45 3300031727 Ga0316576_10003365 Ga0316576_100033652 429
46 3300031733 Ga0316577_10009180 Ga0316577_100091804 429
47 3300034818 Ga0373950_0000033 Ga0373950_0000033_82907_84268 429
48 3300035113 Ga0373936_0000026 Ga0373936_0000026_19115_20440 429
49 3300035241 Ga0373961_0000028 Ga0373961_0000028_63331_64689 429
50 3300035724 Ga0373933_0023396 Ga0373933_0023396_480_1844 429
51 3300035724 Ga0373933_0062363 Ga0373933_0062363_835_2148 429
52 3300036712 Ga0316584_0000072 Ga0316584_0000072_10016_11383 429
53 3300039437 Ga0436365_0181540 Ga0436365_0181540_2924_4324 429
54 3300046517 Ga0495630_0014770 Ga0495630_0014770_3769_5118 429
55 3300046535 Ga0495586_0012377 Ga0495586_0012377_2406_3755 429
56 3300047317 Ga0495604_0064243 Ga0495604_0064243_1320_2699 429
57 3300047472 Ga0495686_0065635 Ga0495686_0065635_321_1775 429
58 3300048907 Ga0496104_0114478 Ga0496104_0114478_22_1341 429
59 3300049571 Ga0501034_0001035 Ga0501034_0001035_15444_16802 429
60 3300049572 Ga0501036_0091140 Ga0501036_0091140_821_2179 429
61 3300049579 Ga0501043_0007254 Ga0501043_0007254_6107_7465 429
62 3300049580 Ga0501046_0000227 Ga0501046_0000227_48016_49374 429
63 3300049581 Ga0501047_0000011 Ga0501047_0000011_169271_170629 429
64 3300049582 Ga0501048_0002184 Ga0501048_0002184_309_1667 429
65 3300049584 Ga0501068_0003276 Ga0501068_0003276_6373_7731 429
66 3300049586 Ga0501070_0001281 Ga0501070_0001281_5209_6567 429
67 3300049586 Ga0501070_0017595 Ga0501070_0017595_3729_5129 429
68 3300049586 Ga0501070_0021785 Ga0501070_0021785_3010_4323 429
69 3300049588 Ga0501072_0000009 Ga0501072_0000009_34831_36234 429
70 3300049589 Ga0501073_0003727 Ga0501073_0003727_5874_7232 429
71 3300049590 Ga0501074_0000202 Ga0501074_0000202_225_1583 429
72 3300049590 Ga0501074_0051757 Ga0501074_0051757_107_1507 429
73 3300049660 Ga0501216_000094 Ga0501216_000094_4434_5840 429
74 3300049665 Ga0501227_000797 Ga0501227_000797_3549_4955 429
75 3300049704 Ga0501221_005648 Ga0501221_005648_93_1499 429
76 3300049705 Ga0501225_0000274 Ga0501225_0000274_11261_12667 429
77 3300049741 Ga0501079_0000138 Ga0501079_0000138_905_2263 429
78 3300049742 Ga0501080_0006026 Ga0501080_0006026_5209_6567 429
79 3300049744 Ga0501083_0005029 Ga0501083_0005029_3286_4644 429
80 3300049823 Ga0501044_0011675 Ga0501044_0011675_6024_7415 429
81 3300050508 nmdc:mga09592_5155_c1 nmdc:mga09592_5155_c1_8706_10139 429
82 3300053123 Ga0500614_018712 Ga0500614_018712_217_1563 429
83 3300054114 Ga0501084_0000004 Ga0501084_0000004_162372_163730 429
84 3300060353 Ga0501082_0001572 Ga0501082_0001572_18348_19706 429
85 3300060353 Ga0501082_0034111 Ga0501082_0034111_807_2120 429
86 3300005458 Ga0070681_10194972 Ga0070681_101949722 430
87 3300005617 Ga0068859_100087108 Ga0068859_1000871082 430
88 3300006028 Ga0070717_10011321 Ga0070717_100113214 430
89 3300006931 Ga0097620_100087103 Ga0097620_1000871032 430
90 3300034818 Ga0373950_0000007 Ga0373950_0000007_25158_26480 430
91 3300042876 Ga0451577_0026473 Ga0451577_0026473_2725_4140 430
92 3300044673 Ga0453683_0000337 Ga0453683_0000337_5370_6785 430
93 3300044712 Ga0453684_0002700 Ga0453684_0002700_9426_10841 430
94 3300045051 Ga0451576_0000780 Ga0451576_0000780_50356_51771 430
95 3300048906 Ga0496103_0129465 Ga0496103_0129465_141_1553 430
96 3300049583 Ga0501067_0000703 Ga0501067_0000703_7553_8875 430
97 3300049583 Ga0501067_0007711 Ga0501067_0007711_1671_3011 430
98 3300049589 Ga0501073_0000794 Ga0501073_0000794_12964_14286 430
99 3300005334 Ga0068869_100000641 Ga0068869_10000064110 432
100 3300025942 Ga0207689_10004798 Ga0207689_1000479811 432

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01565

FAD_binding_4

FAD binding domain

57

185

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
4g3u-assembly1.cif.gz_A mycobacterium smegmatis dpre1 - monoclinic crystal form 0.7588 52 426
4p8m-assembly2.cif.gz_B crystal structure of m. tuberculosis dpre1 in complex with the non-covalent inhibitor qn114 0.7587 8 426
4pfd-assembly2.cif.gz_B crystal structure of m. tuberculosis in complex with a cbt - non-covalent adduct 0.7579 5 426
4p8m-assembly1.cif.gz_A crystal structure of m. tuberculosis dpre1 in complex with the non-covalent inhibitor qn114 0.7564 3 426
6hf0-assembly2.cif.gz_B m. tuberculosis dpre1 covalently bound to a nitrobenzoxacinone. 0.7513 5 426
ID Description Score Start End Superfamily
af_A0A1D6QA56_22_150_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.9729 55 167 3.30.465.10
af_I1LPL0_118_272_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.9693 56 167 3.30.465.10
af_Q39085_113_232_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.9678 50 168 3.30.465.10
af_Q39085_113_232_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.9522 50 168 3.30.465.10
af_P9WJF1_85_203_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.9467 61 167 3.30.465.10
ID Description Score Start End GO Terms
AF-A0A534S9I2-F1-model_v4 FAD-binding oxidoreductase 0.9396 4 159 GO:0005737
GO:0008202
GO:0016020
GO:0050614
GO:0071949
AF-A0A366QYI7-F1-model_v4 FAD-binding PCMH-type domain-containing protein 0.931 4 168 GO:0000246
GO:0005737
GO:0008202
GO:0016020
GO:0050614
GO:0071949
AF-A0A7C1SNW0-F1-model_v4 FAD-binding oxidoreductase 0.9298 2 424 GO:0005737
GO:0008202
GO:0016020
GO:0050614
GO:0071949
AF-W7NGY5-F1-model_v4 FAD-binding PCMH-type domain-containing protein 0.919 100 232 GO:0000246
GO:0005737
GO:0008202
GO:0016020
GO:0050660
AF-K5VP09-F1-model_v4 FAD-binding PCMH-type domain-containing protein 0.9177 52 167 GO:0071949

Feature Viewer

pLDDT pTM Quality
80.75 0.82 High
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Predicted Structure (AlphaFold2)

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