Scaffold Information

Sample ID 3300005467
Scaffold Ga0070706_100000086
Sample Name Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG
Length 108867
Fam Num 9
Taxonomy Bacteria
Environment Rhizosphere
Lineage Bacteria;Pseudomonadota;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas

CRISPR Details

Start Coordinate: 31903 End Coordinate: 33543
Position Repeat Spacer
31903 GCTTCAATGGGGCCACGCGTCTTCACGCGTGGAAAC ATTCAACGGTTTCCGCTTGGGGATGGGCAACTATTCT
31976 GCTTCAATGGGGCCACGCGTCTTCACGCGTGGAAAC CCCTCTGGCGCGACGATCAAGAGTTCCGTTTAGCTCT
32049 GCTTCAATGGGGCCACGCGTCTTCACGCGTGGAAAC CTACTCATCAGTGGGCTTGAGCTAGAAAAGCTCAGACG
32123 GCTTCAATGGGGCCACGCGTCTTCACGCGTGGAAAC GTGCGACTGACGAAGACCTCGCTCGGTGTTTTGACG
32195 GCTTCAATGGGGCCACGCGTCTTCACGCGTGGAAAC AACATGTCGCAGTGTTTCCGCTCGAACTCAGGAACGC
32268 GCTTCAATGGGGCCACGCGTCTTCACGCGTGGAAAC AAGATACAGAGCTTTGCCCTTCAGCGGCTGGGTATCCC
32342 GCTTCAATGGGGCCACGCGTCTTCACGCGTGGAAAC TTGAAACTCTTGCGCTCCCGATGTCCCACTAATCTT
32414 GCTTCAATGGGGCCACGCGTCTTCACGCGTGGAAAC AGATGGAGGAGTGGAAATGCTAACAGCTAAAGATCGC
32487 GCTTCAATGGGGCCACGCGTCTTCACGCGTGGAAAC TCGTCCGTATCTAGGTTTCGTACCCAGTTGATCCA
32558 GCTTCAATGGGGCCACGCGTCTTCACGCGTGGAAAC CTAGCCTCTAGTGCGTCACAGACTGCGAGTCCTGCATT
32632 GCTTCAATGGGGCCACGCGTCTTCACGCGTGGAAAC AAGCAACAGGAGGCTAATACACGCGGACAGGAGAA
32703 GCTTCAATGGGGCCACGCGTCTTCACGCGTGGAAAC AGGTATCCATGTCGATAGCCCAACCGGAGTGCCCGG
32775 GCTTCAATGGGGCCACGCGTCTTCACGCGTGGAAAC AGCTTTATTCACACCCGCCGACGCTGCTACGATAGGGT
32849 GCTTCAATGGGGCCACGCGTCTTCACGCGTGGAAAC GCTTAAAGCGTGGAGCCACAATCCGAACGAGGAGGA
32921 GCTTCAATGGGGCCACGCGTCTTCACGCGTGGAAAC GACGGCTCCAACGAAGGACTTTCCGGGTACGTGGTT
32993 GCTTCAATGGGGCCACGCGTCTTCACGCGTGGAAAC AAGATTGACGATCAAGTAGACGATCATCGCGGGATGAGT
33068 GCTTCAATGGGGCCACGCGTCTTCACGCGTGGAAAC GCGCGGCTGTTTGGCATCACTGGGCGATCGAGTTCGA
33141 GCTTCAATGGGGCCACGCGTCTTCACGCGTGGAAAC CGCTCGTTACAGAGGGATTTAACGACGATTAGGCAATG
33215 GCTTCAATGGGGCCACGCGTCTTCACGCGTGGAAAC CGCCGGTGCGCCAGTTAAGCAGTCTTGCCACTCGATA
33288 GCTTCAATGGGGCCACGCGTCTTCACGCGTGGAAAC AACCCCTAGCGCAAAGGCATGGTCAGGGGAAGGACAA
33361 GCTTCAATGGGGCCACGCGTCTTCACGCGTGGAAAC AGCCGGTTAGGATAACCGCCCGACTGATCGAGAAGTC
33434 GCTTCAATGGGGCCACGCGTCTTCACGCGTGGAAAC GCAGCAATCAACGCGGCAGATATCAACGGGCAGACGA
33507 GCTTCAATGGGGCCACGCGTCTTCACGCGTGGAAAC -

PFAM Info

PFAM Domain Meaning GOTerms

Scaffold Families

F313755 , F333092 , F375428 , F412640 , F429821 , F432435 , F465114 , F495738 , F496943