Scaffold Information

Sample ID 3300005295
Scaffold Ga0065707_10083085
Sample Name Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2)
Length 10569
Fam Num 1
Taxonomy Bacteria
Environment Rhizosphere
Lineage Bacteria;Pseudomonadota;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingopyxis

CRISPR Details

Start Coordinate: 5485 End Coordinate: 8933
Position Repeat Spacer
5485 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC GTCCTGCGGGAGCCGTGGGTATCGCGCAGCTGATGCC
5558 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC CACAGGCACTATCAGTGACGGCGCGGGCGCTGCGGG
5630 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC CGCCGGTGAATCTGCCTATCGACATCGCACCCACAC
5702 GCTTCGATGAGGCCACAGCGTTTCGCTGTGGATCTC GGTGCGTGTTCCTTCGCCTTCCATCGTCCTGATCTT
5774 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC TCCGCCAGCTTGTTGAAGTCCACCTCATACTTCCGATT
5848 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC TTCACTCGTGCCAACCGTGAAGCTGGCGTCATCTT
5919 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC GGAGACGATCTACGGCCCGTCGCTTGAGCTGAGCAA
5991 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC TCCGAGCTGAATCCAGGGTTCTACCTGGACAGCTGTTA
6065 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC GAGGTAATGGTGCCGGCTTGCTAAGCCGAGGCTGTCG
6138 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC TTGCGAAGGGTGCAGAGCTGTTCTGCCCCGACTTACC
6211 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC CCCGGGACTTGAGCGGTTGGCAAAGGATTTTGGCGA
6283 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC ATCAACGCTTCGCACCTGGCGCCTGGCCTCATTGCA
6355 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC CTCAGTTCAAAGGCATTGCCTACGCGAACATTTGCAA
6428 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC GTGCTCGCGTACAAGCGACTCGGCTGGGATGAATATTG
6502 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC TCAAGCTCGGATCAACTGTGCGCTGGTCCGAATCAG
6574 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC CGCCATCGGCGGCGACACGCATCTCTTGCCGACCAGTTTC
6650 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC GATCGCTGCGCGCCCACCAAGCGAGTCTTCTGCTT
6721 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC CAGCTCCCGTCGCTGTAAGGTTCGCCAGCGTTGTG
6792 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC CGCCCAGAACAACGCCAGTGCCAAGGCTAGCGGCCA
6864 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC CGAAGGGTGAGGGCGTCAAGGGCGGGACGGAATG
6934 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC CCAGGTTTTCATAGTTGAGCAGGCGGAAACCGCTGTT
7007 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC TGACCAAAATAGGAGACACCACACATGCCGATCAAC
7079 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC CTATCGATGTCCTTGGGCTGCTCGACGCTGCAAGAGC
7152 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC CGGTCTGTCGCTCATCCTTACATGGCGTAATCACTTT
7225 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC AATGGCATCACGAAAGAAAGCGACGCGGCGTGCGGCGGC
7300 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC GACGGAGGCCCGCAATGCAGCAATGAAGGCTGACCC
7372 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC AACGCCCGCGCTGCCGGTCGTCCAGCGATAGCAGCAC
7445 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC CAGCGGCAACTTCCCGCATGTGACGCGATCGAACACCGGCCT
7523 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC AAGTCCTGCGACTGCCCGCCGATCGCGGCCAACGAG
7595 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC GGGGGCAGCAATGCCGCAGCCGTACACTGAAGAATT
7667 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC GCGATCGACGACTACATCGCGAAGCACGCGGATCTGTT
7741 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC TCCCGCTGCAATGACGTGGTTCGGCAGCCATCCTGA
7813 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC GCTACCGAAAAATCCGCCTGTCGAGCCGCCGCCGCCGA
7887 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC GGCCGGGTGAGCACCACGCTGCTGTCGGCAGACCG
7958 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC GAGGCGAAGGCGAAGGCGCTCAAAGACCTGGAGCGC
8030 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC GCGAATCTGTTGACATAGCAAACGCCATCAACACGA
8102 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC GGAAATGGAAGGAATGACCTGGGATGCCCTTGTTGA
8174 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC CAGCACCTGATTCGCATCAAGGTGCTTACACCAGTC
8246 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC AACAGTACATGCCGGATTCGCGGTAAAAGTCTGATT
8318 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC CCTGTTTCGTATTCATCACTGCACCCTTGTTGCTATG
8391 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC CGAGTGACCGTCTGCGATTCGGCAGGAGGATCGATTC
8464 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC CTGTATCACTCGCACGATGATCGTCGACGAGCTGCG
8536 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC CTGGATGATCGCGGACGGCTGCACGCAGCGTCCGGC
8608 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC GGCAAGCCGGTCTATATTCAGTTCGTTGGTATGAAAA
8681 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC TCAGCGGCGCTCATGTGGTTCGACTCCCTATGAAA
8752 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC TGTGGTCGAGGTCGCGACCACCGAGGAAGTGGGCGG
8824 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC CGCGCGCTATATCGGATGGACAGGCGATGCTAAGTAC
8897 GCTTCAATGAGGCCACAGCGTTTCGCTGTGGATCTC -

PFAM Info

PFAM Domain Meaning GOTerms

Scaffold Families

F445186