F476737

General Info

Members Datasets Scaffolds Average Seq Length
710 397 1421 314

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2516143018|2516210220
Length 315
Sequence GLDLNLLVVLDALMTERNLTAAARSINLSQPAMSAAVARLRTYFRDDLFAMAGREFIPTPRAEGLAPAVRDALLQIQLSIVSWEPFNPAQSDRRFRIVLSDYVTLVFFEKVVARAAQEAPGISFDCLPLADDFEELLRRGDIDFLIMPELFMSMHPHAALFEDKFVCVGCRTNEQLSEPFTFERYMSMGHVAVKFGNTRRPTIEEWYLLEHGLKRRIEVVVQGFSMIPPMLSGTERIGTMPLRLAQHFAKTIPLRIVELPLPIPPLAEAVQWPALHNSDPASLWMRELLLQEASLMVSPRAPVRLSAPGFDCVVQ

Samples

Sample ID Description Type Environment
1 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
2 3300006941 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW Metagenome Nodule
3 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
4 3300006943 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW Metagenome Nodule
5 3300009763 Root nodule microbial communities of legume samples collected from Mexico - Siratro Mexico nodule mix Metagenome Nodule
6 3300009766 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico white nodule Metagenome Nodule
7 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
8 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
9 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
10 3300021324 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS4 Metagenome Nodule
11 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
12 3300022739 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - brown nodules Metagenome Nodule
13 3300022740 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - pink nodules Metagenome Nodule
14 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
15 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
16 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
17 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
18 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
19 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
20 3300031967 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - elongated nodules Metagenome Nodule
21 3300033430 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - small nodules Metagenome Nodule
22 3300033442 Root nodule microbial communities collected in Santa Monica, California, United States - Edamame nodules 1 Metagenome Nodule
23 3300033464 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - branched nodules Metagenome Nodule
24 2516143018 Ensifer sp. BR816 Isolate Nodule
25 2508501114 Microvirga lotononidis WSM3557 Isolate Nodule
26 2508501122 Ensifer yinggardensis WSM1721 Isolate Nodule
27 2508501123 Mesorhizobium sp. WSM3626 Isolate Nodule
28 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
29 2510065045 Paraburkholderia sprentiae WSM5005 Isolate Nodule
30 2510065057 Sinorhizobium meliloti WSM1022 Isolate Nodule
31 2511231052 Sinorhizobium meliloti AK58 Isolate Nodule
32 2512875026 Sinorhizobium medicae WSM1115 Isolate Nodule
33 2513237084 Rhizobium leguminosarum bv. viciae UPM1131 Isolate Nodule
34 2513237085 Rhizobium leguminosarum bv. viciae UPM1137 Isolate Nodule
35 2513237086 Sinorhizobium meliloti MVII-I Isolate Nodule
36 2513237088 Rhizobium mesoamericanum STM6155 Isolate Nodule
37 2513237089 Sinorhizobium medicae DI28 Isolate Nodule
38 2513237090 Mesorhizobium sp. WSM3224 Isolate Nodule
39 2513237091 Sinorhizobium meliloti RRI128 Isolate Nodule
40 2513237092 Bradyrhizobium sp. WSM1743 Isolate Nodule
41 2513237094 Bradyrhizobium sp. WSM3983 Isolate Nodule
42 2513237095 Bradyrhizobium diazoefficiens USDA 122 Isolate Nodule
43 2513237096 Bradyrhizobium pachyrhizi USDA 3259 Isolate Nodule
44 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
45 2513237101 Bradyrhizobium murdochi WSM1741 Isolate Nodule
46 2513237103 Rhizobium leguminosarum bv. viciae VF39 Isolate Nodule
47 2513237104 Bradyrhizobium sp. EC3.3 Isolate Nodule
48 2513237137 Bradyrhizobium elkanii USDA 94 Isolate Nodule
49 2513237138 Rhizobium favelukesii OR191 Isolate Nodule
50 2513237139 Bradyrhizobium ottawaense USDA 4 Isolate Nodule
51 2513237140 Sinorhizobium meliloti GVPV12 Isolate Nodule
52 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
53 2513237143 Sinorhizobium meliloti Mlalz-1 Isolate Nodule
54 2513237145 Bradyrhizobium elkanii USDA 3254 Isolate Nodule
55 2513237156 Sinorhizobium medicae WSM1369 Isolate Nodule
56 2513237159 Rhizobium giardinii bv. giardinii H152 Isolate Nodule
57 2513237160 Sinorhizobium medicae WSM244 Isolate Nodule
58 2513237161 Bradyrhizobium sp. WSM2793 Isolate Nodule
59 2513237162 Rhizobium ruizarguesonis GB30 Isolate Nodule
60 2515075009 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
61 2515154107 Sinorhizobium meliloti 4H41 Isolate Nodule
62 2515154113 Rhizobium ruizarguesonis Vc2 Isolate Nodule
63 2515154114 Rhizobium ruizarguesonis Vh3 Isolate Nodule
64 2515154116 Rhizobium ruizarguesonis Ps8 Isolate Nodule
65 2515154122 Paraburkholderia atlantica JPY251 Isolate Nodule
66 2516653046 Sinorhizobium meliloti BO21CC Isolate Nodule
67 2516653077 Rhizobium acaciae WSM1481 Isolate Nodule
68 2517093001 Bradyrhizobium japonicum USDA 124 Isolate Nodule
69 2517487022 Sinorhizobium medicae WSM4191 Isolate Nodule
70 2517572143 Bradyrhizobium elkanii USDA 76 Isolate Nodule
71 2524023205 Bradyrhizobium sp. Cp5.3 Isolate Nodule
72 2524023207 Ensifer sp. USDA 6670 Isolate Nodule
73 2528768022 Bradyrhizobium japonicum USDA 123 Isolate Nodule
74 2551306084 Sinorhizobium meliloti 5A14 Isolate Nodule
75 2551306085 Sinorhizobium meliloti AE608H Isolate Nodule
76 2551306086 Sinorhizobium meliloti AK11 Isolate Nodule
77 2551306087 Sinorhizobium meliloti A0643DD Isolate Nodule
78 2551306089 Sinorhizobium meliloti 1A42 Isolate Nodule
79 2551306090 Sinorhizobium meliloti A0641M Isolate Nodule
80 2551306091 Sinorhizobium meliloti C0431A Isolate Nodule
81 2551306092 Sinorhizobium meliloti AK75 Isolate Nodule
82 2551306093 Sinorhizobium meliloti C0438LL Isolate Nodule
83 2558860983 Allorhizobium undicola ATCC 700741 Isolate Rhizoplane
84 2617270735 Bradyrhizobium shewense ERR11 Isolate Nodule
85 2617270741 Bradyrhizobium yuanmingense CCBAU 10071 Isolate Nodule
86 2657244999 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
87 2687453392 Mesorhizobium ciceri biserrulae WSM1284 Isolate Unclassified
88 2690316117 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
89 2718217991 Paraburkholderia sprentiae WSM5005 Isolate Nodule
90 2721755755 Bradyrhizobium icense LMTR 13 Isolate Nodule
91 2728368998 Bradyrhizobium macuxiense BR 10303 Isolate Nodule
92 2738541333 Rhizobium sophoriradicis CCBAU 03470 Isolate Unclassified
93 2744054633 Bradyrhizobium neotropicale BR 10247 Isolate Unclassified
94 2751185821 Ensifer shofinae CCBAU 251167 Isolate Unclassified
95 2751185846 Paraburkholderia ribeironis STM 7296 Isolate Unclassified
96 2773857925 Microvirga vignae BR3299 Isolate Unclassified
97 2791355082 Ensifer alkalisoli YIC4027 Isolate Nodule
98 2791355091 Sinorhizobium sp. FG01 Isolate Nodule
99 2791355092 Sinorhizobium sp. NG07B Isolate Nodule
100 2791355137 Paraburkholderia piptadeniae STM7183 Isolate Unclassified
101 2791355197 Bradyrhizobium sp. C9 Isolate Nodule
102 2791355199
103 2802428858 Sinorhizobium medicae M14-1 Isolate Nodule
104 2802428859 Sinorhizobium medicae SF3.41 Isolate Nodule
105 2802428860 Sinorhizobium medicae M19-1 Isolate Nodule
106 2802428861 Sinorhizobium medicae USDA1037 Isolate Nodule
107 2802428862 Sinorhizobium medicae M7-4 Isolate Nodule
108 2802428863 Sinorhizobium medicae M26-2 Isolate Nodule
109 2802429268 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
110 2802429603 Bradyrhizobium ottawaense L2 Isolate Nodule
111 2802429605 Rhizobium sophoriradicis L101 Isolate Nodule
112 2816332527 Bradyrhizobium diazoefficiens Y21 Isolate Nodule
113 2824600985 Bradyrhizobium sp.HAMBI 2135 Isolate Unclassified
114 2824609381 Bradyrhizobium sp. HAMBI 2134 Isolate Unclassified
115 2824617872 Bradyrhizobium sp. HAMBI 2133 Isolate Unclassified
116 2824626560 Bradyrhizobium sp. HAMBI 2149 Isolate Unclassified
117 2824635225 Bradyrhizobium sp. HAMBI 2136 Isolate Unclassified
118 2824644064 Bradyrhizobium sp. HAMBI 2137 Isolate Unclassified
119 2824653114 Bradyrhizobium sp. HAMBI 2142 Isolate Unclassified
120 2824661429 Bradyrhizobium sp. HAMBI 2115 Isolate Unclassified
121 2824671348 Bradyrhizobium sp. HAMBI 2125 Isolate Unclassified
122 2824679649 Bradyrhizobium sp.HAMBI 2116 Isolate Unclassified
123 2824687955 Bradyrhizobium sp. HAMBI 2126 Isolate Unclassified
124 2824696289 Bradyrhizobium sp. HAMBI 2127 Isolate Unclassified
125 2824704595 Bradyrhizobium sp. HAMBI 2150 Isolate Unclassified
126 2824714736 Bradyrhizobium sp. HAMBI 2151 Isolate Unclassified
127 2824723954 Bradyrhizobium sp. HAMBI 2152 Isolate Unclassified
128 2824732956 Bradyrhizobium sp. HAMBI 2153 Isolate Unclassified
129 2824746037 Bradyrhizobium sp. HAMBI 2299 Isolate Unclassified
130 2824753945 Bradyrhizobium sp. HAMBI 2128 Isolate Unclassified
131 2824763712 Bradyrhizobium sp. HAMBI 2129 Isolate Unclassified
132 2824773399 Bradyrhizobium sp. HAMBI 2130 Isolate Unclassified
133 2835312727 Microvirga calopogonii CCBAU 65841 Isolate Nodule
134 2838035591 Rhizobium mongolense SEMIA 4087 Isolate Nodule
135 2838074704 Sinorhizobium terangae SEMIA 6460 Isolate Unclassified
136 2838122688 Bradyrhizobium sp. CIR3A Isolate Nodule
137 2838661181 Rhizobium mongolense SEMIA 402 Isolate Nodule
138 2838686498 Rhizobium leguminosarum SEMIA 416 Isolate Nodule
139 2841941048 Bradyrhizobium sp. SBR1B Isolate Nodule
140 2841949485 Bradyrhizobium sp. ERR14 Isolate Nodule
141 2841957949 Bradyrhizobium sp. CIR1 Isolate Nodule
142 2841966195 Bradyrhizobium sp. CIR18 Isolate Nodule
143 2841974524 Bradyrhizobium sp. CIR48 Isolate Nodule
144 2841983080 Bradyrhizobium sp. IAR9 Isolate Nodule
145 2842110456 Rhizobium esperanzae SEMIA 414 Isolate Nodule
146 2842271015 Rhizobium leguminosarum SEMIA 488 Isolate Nodule
147 2842521101 Rhizobium giardinii SEMIA 4084 Isolate Nodule
148 2844454524 Rhizobium leguminosarum bv. viciae BIHB 1217 Isolate Nodule
149 2847417321 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
150 2847930680 Bradyrhizobium zhanjiangense CCBAU 51778 Isolate Unclassified
151 2847939898 Bradyrhizobium ottawaense OO99 Isolate Unclassified
152 2848992105 Sinorhizobium fredii CCBAU 25509 Isolate Unclassified
153 2852387548 Rhizobium jaguaris CCGE525 Isolate Unclassified
154 2854916844 Neorhizobium huautlense DSM 21817 Isolate Unclassified
155 2855825444 Sinorhizobium meliloti CXM1-105 Isolate Nodule
156 2855839649 Sinorhizobium meliloti AK555 Isolate Unclassified
157 2855872281 Sinorhizobium fredii PCH1 Isolate Nodule
158 2874604998 Bradyrhizobium sp. LMTR 3 Isolate Nodule
159 2874612657 Bradyrhizobium forestalis INPA54B Isolate Nodule
160 2874620515 Bradyrhizobium nanningense CCBAU 53390 Isolate Unclassified
161 2876363079 Mesorhizobium loti R7ANS::ICEMlSym2042 Isolate Nodule
162 2876369609 Mesorhizobium sp. USDA-HM6 Isolate Unclassified
163 2876761206 Bradyrhizobium centrolobii BR 10245 Isolate Nodule
164 2876808645 Bradyrhizobium algeriense RST89 Isolate Unclassified
165 2879083081 Bradyrhizobium zhanjiangense CCBAU 51787 Isolate Unclassified
166 2879110137 Bradyrhizobium algeriense RST91 Isolate Nodule
167 2881161766 Mesorhizobium sp. M1D.F.Ca.ET.043.01.1.1 Isolate Nodule
168 2881665667 Bradyrhizobium vignae LMG 28791 Isolate Unclassified
169 2882456835 Microvirga sp. KLBC 81 Isolate Unclassified
170 2885270888 Paraburkholderia sp. UYCPa14C Isolate Unclassified
171 2885366525 Bradyrhizobium sp. LVM 105 Isolate Unclassified
172 2885374607 Bradyrhizobium sp. NAS96.2 Isolate Unclassified
173 2885383462 Bradyrhizobium sp. Leo170 Isolate Unclassified
174 2885409591 Bradyrhizobium sp. NAS80.1 Isolate Unclassified
175 2888343758 Mesorhizobium sp. AA22 Isolate Unclassified
176 2888350351 Mesorhizobium sp. M2A.F.Ca.ET.046.03.2.1 Isolate Nodule
177 2888378607 Bradyrhizobium sp. LCT2 Isolate Unclassified
178 2889033259 Bradyrhizobium sp. CCBAU 051011 Isolate Unclassified
179 2896384573 Ensifer sp. MPMI2T Isolate Unclassified
180 2902682994 Paraburkholderia atlantica CNPSo 3155 Isolate Unclassified
181 2903521522 Mesorhizobium loti R7ANS::ICEMlSym2014 Isolate Nodule
182 2903528002 Mesorhizobium loti R7ANS::ICEMlSym2037 Isolate Nodule
183 2903748898 Bradyrhizobium uaiense UFLA 03-164 Isolate Nodule
184 2903768456 Bradyrhizobium sp. Leo121 Isolate Unclassified
185 2904615490 Paraburkholderia franconis CNPSo 3157 Isolate Unclassified
186 2904666416 Bradyrhizobium nanningense CCBAU 51757 Isolate Unclassified
187 2904690495 Bradyrhizobium ivorense CI-1B Isolate Nodule
188 2904699407
189 2904711408 Bradyrhizobium sp. USDA 3456 Isolate Unclassified
190 2906643746 Bradyrhizobium genosp. SA-3 Rp7b Isolate Unclassified
191 2906660503 Bradyrhizobium brasilense UFLA 03-321 Isolate Unclassified
192 2908739725 Bradyrhizobium sp. UFLA03-84 Isolate Nodule
193 2908756301 Bradyrhizobium ivorense CI-41S Isolate Nodule
194 2908775508 Bradyrhizobium sp. SUTN9-2 Isolate Unclassified
195 2915980308 Sinorhizobium medicae USDA1149 Isolate Nodule
196 2915986958 Sinorhizobium meliloti USDA1659 Isolate Nodule
197 2915993759 Sinorhizobium meliloti USDA1336 Isolate Nodule
198 2916000859 Sinorhizobium meliloti USDA1562 Isolate Nodule
199 2916007675 Sinorhizobium meliloti USDA1289 Isolate Nodule
200 2916014648 Sinorhizobium meliloti USDA1583 Isolate Nodule
201 2916021584 Sinorhizobium meliloti USDA1550 Isolate Nodule
202 2916028427 Sinorhizobium meliloti USDA1613 Isolate Nodule
203 2916035215 Sinorhizobium meliloti 3011 Isolate Nodule
204 2916041962 Sinorhizobium meliloti USDA1795 Isolate Nodule
205 2916048683 Sinorhizobium meliloti USDA1796 Isolate Nodule
206 2916055098 Sinorhizobium meliloti USDA1770 Isolate Nodule
207 2916061851 Sinorhizobium medicae USDA1638 Isolate Nodule
208 2916068649 Sinorhizobium meliloti USDA1220 Isolate Nodule
209 2916076590 Sinorhizobium meliloti USDA1661 Isolate Nodule
210 2920822456 Ensifer sesbaniae CCBAU 65729 Isolate Unclassified
211 2921201388 Sinorhizobium meliloti USDA1692 Isolate Nodule
212 2921208531 Sinorhizobium meliloti USDA1660 Isolate Nodule
213 2921237296 Sinorhizobium meliloti USDA1508 Isolate Nodule
214 2921244191 Sinorhizobium meliloti 2119 Isolate Nodule
215 2921250672 Sinorhizobium medicae USDA1169 Isolate Nodule
216 2921257292 Sinorhizobium meliloti USDA1320 Isolate Nodule
217 2921263974 Sinorhizobium meliloti USDA1107 Isolate Nodule
218 2921282425 Sinorhizobium meliloti USDA1203 Isolate Nodule
219 2921289301 Sinorhizobium meliloti USDA1730 Isolate Nodule
220 2921296804 Sinorhizobium meliloti USDA1200 Isolate Nodule
221 2922361189 Bradyrhizobium australiense WSM 1791 Isolate Nodule
222 2922386360 Bradyrhizobium archetypum WSM 1744 Isolate Nodule
223 2922393267 Bradyrhizobium sp. WBAH10 Isolate Nodule
224 2924144063 Sinorhizobium meliloti USDA1022 Isolate Nodule
225 2924150972 Sinorhizobium meliloti USDA1700 Isolate Nodule
226 2924158325 Sinorhizobium meliloti USDA1146 Isolate Nodule
227 2924165586 Sinorhizobium meliloti USDA1264 Isolate Nodule
228 2924172951 Sinorhizobium meliloti USDA1626 Isolate Nodule
229 2924179722 Sinorhizobium meliloti USDA1280 Isolate Nodule
230 2924186466 Sinorhizobium meliloti USDA1389 Isolate Nodule
231 2924193448 Sinorhizobium meliloti USDA1158 Isolate Nodule
232 2924200457 Sinorhizobium meliloti USDA1007 Isolate Nodule
233 2924207177 Sinorhizobium meliloti USDA1589 Isolate Nodule
234 2924214083 Sinorhizobium meliloti USDA1702 Isolate Nodule
235 2924221636 Sinorhizobium meliloti USDA1416 Isolate Nodule
236 2924228884 Sinorhizobium meliloti USDA1581 Isolate Nodule
237 2929615660 Bradyrhizobium japonicum TXVA Isolate Nodule
238 2929624759 Bradyrhizobium japonicum TXEA Isolate Nodule
239 2933016740 Rhizobium sp. SEMIA 4085 Isolate Nodule
240 2933577622 Bradyrhizobium japonicum SEMIA 417 Isolate Nodule
241 2933586486 Rhizobium leguminosarum SEMIA 4039 Isolate Nodule
242 2935630451 Bradyrhizobium sp. I1.14.4 Isolate Nodule
243 2936996657 Sinorhizobium meliloti USDA1025 Isolate Nodule
244 2937002841 Sinorhizobium meliloti USDA1006 Isolate Nodule
245 2937009748 Sinorhizobium meliloti USDA1162 Isolate Nodule
246 2937016420 Sinorhizobium meliloti USDA1027 Isolate Nodule
247 2937023124 Sinorhizobium meliloti USDA1335 Isolate Nodule
248 2937029754 Sinorhizobium medicae USDA1624 Isolate Nodule
249 2937036028 Sinorhizobium medicae USDA1608 Isolate Nodule
250 2937042894 Sinorhizobium meliloti USDA1687 Isolate Nodule
251 2937049772 Sinorhizobium meliloti USDA1691 Isolate Nodule
252 2937056579 Sinorhizobium meliloti USDA1357 Isolate Nodule
253 2937063883 Sinorhizobium meliloti USDA1808 Isolate Nodule
254 2937071275 Sinorhizobium meliloti USDA1623 Isolate Nodule
255 2937078374 Sinorhizobium medicae USDA1004 Isolate Nodule
256 2937084907 Sinorhizobium medicae USDA1664 Isolate Nodule
257 2937091812 Sinorhizobium meliloti USDA1221 Isolate Nodule
258 2937098957 Sinorhizobium meliloti USDA1519 Isolate Nodule
259 2937106411 Sinorhizobium meliloti USDA1214 Isolate Nodule
260 2937113482 Sinorhizobium meliloti USDA1180 Isolate Nodule
261 2937119839 Sinorhizobium meliloti USDA1790 Isolate Nodule
262 2937126314 Sinorhizobium meliloti USDA1612 Isolate Nodule
263 2941507105 Bradyrhizobium sp. i1.12.3 Isolate Nodule
264 2941515067 Bradyrhizobium sp. i1.14.1 Isolate Nodule
265 2941523033 Bradyrhizobium sp. i1.8.4 Isolate Nodule
266 2957382221 Sinorhizobium meliloti USDA1919 Isolate Nodule
267 2957388812 Sinorhizobium meliloti USDA1195 Isolate Nodule
268 2957395598 Sinorhizobium meliloti USDA1237 Isolate Nodule
269 2957402308 Sinorhizobium meliloti USDA1794 Isolate Nodule
270 2957408893 Sinorhizobium meliloti USDA1163 Isolate Nodule
271 2957415311 Sinorhizobium meliloti USDA1724 Isolate Nodule
272 2957422303 Sinorhizobium meliloti USDA1497 Isolate Nodule
273 2957430029 Sinorhizobium meliloti USDA1590 Isolate Nodule
274 2957437181 Sinorhizobium medicae USDA1694 Isolate Nodule
275 2957443900 Sinorhizobium meliloti USDA1734 Isolate Nodule
276 2957450854 Sinorhizobium meliloti USDA1655 Isolate Nodule
277 2957457609 Sinorhizobium meliloti USDA1751 Isolate Nodule
278 2957464669 Sinorhizobium meliloti USDA1520 Isolate Nodule
279 2957471148 Sinorhizobium meliloti USDA1204 Isolate Nodule
280 2957478035 Sinorhizobium meliloti USDA1171 Isolate Nodule
281 2957484790 Sinorhizobium meliloti USDA1464 Isolate Nodule
282 2957491536 Sinorhizobium meliloti USDA1804 Isolate Nodule
283 2957498199 Sinorhizobium meliloti USDA1561 Isolate Nodule
284 2957505466 Sinorhizobium meliloti USDA1696 Isolate Nodule
285 2958064165 Mesorhizobium sp. SARCC-RB16n Isolate Unclassified
286 2958115193 Mesorhizobium sp. M00.F.Ca.ET.217.01.1.1 Isolate Nodule
287 2960584000 Sinorhizobium meliloti USDA1530 Isolate Nodule
288 2960591022 Sinorhizobium medicae USDA1066 Isolate Nodule
289 2960597568 Sinorhizobium meliloti 3085 Isolate Nodule
290 2960603979 Sinorhizobium meliloti USDA1580 Isolate Nodule
291 2960610863 Sinorhizobium meliloti USDA1792 Isolate Nodule
292 2960617483 Sinorhizobium meliloti USDA1719 Isolate Nodule
293 2960624210 Sinorhizobium meliloti USDA1415 Isolate Nodule
294 2960631154 Sinorhizobium medicae USDA1629 Isolate Nodule
295 2960637947 Sinorhizobium meliloti USDA1202 Isolate Nodule
296 2960645483 Sinorhizobium meliloti USDA1703 Isolate Nodule
297 2960652885 Sinorhizobium meliloti USDA1199 Isolate Nodule
298 2960660292 Sinorhizobium meliloti USDA1883 Isolate Nodule
299 2960667422 Sinorhizobium meliloti USDA1170 Isolate Nodule
300 2960674078 Sinorhizobium meliloti USDA1666 Isolate Nodule
301 2960680706 Sinorhizobium medicae USDA1150 Isolate Nodule
302 2960687367 Sinorhizobium meliloti USDA1462 Isolate Nodule
303 2960693952 Sinorhizobium medicae USDA1630 Isolate Nodule
304 2964607997 Sinorhizobium meliloti USDA1212 Isolate Nodule
305 2964615318 Sinorhizobium meliloti USDA1248 Isolate Nodule
306 2964621998 Sinorhizobium meliloti USDA1235 Isolate Nodule
307 2964628898 Sinorhizobium meliloti USDA1191 Isolate Nodule
308 2964636051 Sinorhizobium meliloti USDA1594 Isolate Nodule
309 2964643177 Sinorhizobium meliloti USDA1760 Isolate Nodule
310 2964649959 Sinorhizobium meliloti USDA1591 Isolate Nodule
311 2964656573 Sinorhizobium meliloti USDA1308 Isolate Nodule
312 2964663802 Sinorhizobium meliloti USDA1688 Isolate Nodule
313 2964670856 Sinorhizobium meliloti USDA1211 Isolate Nodule
314 2964678106 Sinorhizobium meliloti USDA1210 Isolate Nodule
315 2964685014 Sinorhizobium meliloti USDA1232 Isolate Nodule
316 2964691889 Sinorhizobium meliloti USDA1379 Isolate Nodule
317 2964698721 Sinorhizobium meliloti USDA1656 Isolate Nodule
318 2964705432 Sinorhizobium meliloti USDA1614 Isolate Nodule
319 2964712639 Sinorhizobium meliloti USDA1616 Isolate Nodule
320 2964719344 Sinorhizobium meliloti USDA1456 Isolate Nodule
321 2967664464 Sinorhizobium meliloti USDA1208 Isolate Nodule
322 2967671571 Sinorhizobium meliloti USDA1496 Isolate Nodule
323 2967678726 Sinorhizobium meliloti USDA1467 Isolate Nodule
324 2967686174 Sinorhizobium medicae USDA1641 Isolate Nodule
325 2967693043 Sinorhizobium meliloti USDA1183 Isolate Nodule
326 2967699805 Sinorhizobium meliloti USDA1695 Isolate Nodule
327 2967706974 Sinorhizobium meliloti USDA1206 Isolate Nodule
328 2967714385 Sinorhizobium meliloti USDA1023 Isolate Nodule
329 2967721400 Sinorhizobium meliloti USDA1742 Isolate Nodule
330 2967728569 Sinorhizobium medicae USDA1607 Isolate Nodule
331 2967735183 Sinorhizobium meliloti USDA1710 Isolate Nodule
332 2967742019 Sinorhizobium meliloti USDA1676 Isolate Nodule
333 2967748971 Sinorhizobium meliloti USDA1024A Isolate Nodule
334 2967755722 Sinorhizobium meliloti USDA1302 Isolate Nodule
335 2967762386 Sinorhizobium meliloti USDA1397 Isolate Nodule
336 2967769361 Sinorhizobium meliloti USDA1005 Isolate Nodule
337 2967775926 Sinorhizobium meliloti USDA1678 Isolate Nodule
338 2968091066 Mesorhizobium sp. AA23 Isolate Unclassified
339 2968117919 Mesorhizobium atlanticum CNPSo 3140 Isolate Unclassified
340 2968128360 Mesorhizobium sp. WSM3873 Isolate Unclassified
341 2970019648 Sinorhizobium meliloti USDA1603 Isolate Nodule
342 2970026789 Sinorhizobium medicae USDA1611 Isolate Nodule
343 2970033650 Sinorhizobium meliloti USDA1565 Isolate Nodule
344 2970040964 Sinorhizobium meliloti USDA1501 Isolate Nodule
345 2970047711 Sinorhizobium meliloti USDA1793 Isolate Nodule
346 2970054988 Sinorhizobium meliloti USDA1031 Isolate Nodule
347 2970061556 Sinorhizobium meliloti USDA1810 Isolate Nodule
348 2970068827 Sinorhizobium meliloti USDA1227 Isolate Nodule
349 2970076120 Sinorhizobium meliloti USDA1706 Isolate Nodule
350 2970088815 Sinorhizobium meliloti USDA1819 Isolate Nodule
351 2970095765 Sinorhizobium meliloti USDA1225 Isolate Nodule
352 2970102677 Sinorhizobium meliloti USDA1325 Isolate Nodule
353 2970109326 Sinorhizobium meliloti USDA1186 Isolate Nodule
354 2970116247 Sinorhizobium meliloti USDA1566 Isolate Nodule
355 2970122695 Sinorhizobium medicae 3082 Isolate Nodule
356 2970129317 Sinorhizobium meliloti USDA1008 Isolate Nodule
357 2970136068 Sinorhizobium meliloti USDA1699 Isolate Nodule
358 2970143518 Sinorhizobium medicae USDA1652 Isolate Nodule
359 2970149975 Sinorhizobium meliloti USDA1215 Isolate Nodule
360 2970156795 Sinorhizobium meliloti USDA1491 Isolate Nodule
361 2970164137 Sinorhizobium meliloti USDA1018 Isolate Nodule
362 2970170962 Sinorhizobium meliloti USDA1571 Isolate Nodule
363 2970177841 Sinorhizobium meliloti USDA1533 Isolate Nodule
364 2970184632 Sinorhizobium meliloti USDA1593 Isolate Nodule
365 2970191845 Sinorhizobium meliloti USDA1187 Isolate Nodule
366 2977516862 Sinorhizobium meliloti USDA1791 Isolate Nodule
367 2977523885 Sinorhizobium meliloti USDA1777 Isolate Nodule
368 2977530762 Sinorhizobium medicae USDA1606 Isolate Nodule
369 2977537788 Sinorhizobium meliloti USDA1184 Isolate Nodule
370 2977544691 Sinorhizobium medicae USDA1631 Isolate Nodule
371 2977551784 Sinorhizobium meliloti USDA1035 Isolate Nodule
372 2977558990 Sinorhizobium meliloti USDA1222 Isolate Nodule
373 2977565890 Sinorhizobium meliloti USDA1617 Isolate Nodule
374 2977572785 Sinorhizobium meliloti USDA1767 Isolate Nodule
375 2977579622 Sinorhizobium meliloti USDA1161 Isolate Nodule
376 2979742915 Mesorhizobium sp. M2A.F.Ca.ET.046.02.1.1 Isolate Nodule
377 3005474847 Bradyrhizobium sp. CCBAU 53421 Isolate Nodule
378 3005483717 Bradyrhizobium agreste CNPSo 4010 Isolate Unclassified
379 639633055 Rhizobium leguminosarum bv. viciae 3841 Isolate Unclassified
380 642555112 Paraburkholderia phymatum STM815 Isolate Nodule
381 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule
382 643692032 Sinorhizobium fredii NGR234 Isolate Nodule
383 648276728 Sinorhizobium meliloti BL225C Isolate Nodule
384 8003992118 Sinorhizobium meliloti RRI128 Isolate Nodule
385 8003999396 Sinorhizobium medicae WSM1115 Isolate Nodule
386 8004703790 Mesorhizobium sp. M00.F.Ca.ET.158.01.1.1 Isolate Nodule
387 8006964411 Bradyrhizobium sp. sBnM-33 Isolate Nodule
388 8006984368 Bradyrhizobium sp. SRL28 Isolate Unclassified
389 8006994254 Bradyrhizobium sp. sGM-13 Isolate Nodule
390 8019555841 Bradyrhizobium sp. JR6.1 Isolate Nodule
391 8019565922 Bradyrhizobium sp. JR3.5 Isolate Nodule
392 8046767195 Rhizobium calliandrae CCGE524 Isolate Unclassified
393 8049293176 Ensifer alkalisoli YIC4027 Isolate Nodule
394 8055742211 Bradyrhizobium japonicum 5038 Isolate Nodule
395 8056673599 Bradyrhizobium hereditatis WSM 1738 Isolate Nodule
396 8056681323 Bradyrhizobium cenepequi CNPSo 4026 Isolate Nodule
397 8057575449 Rhizobium mayense CCGE526 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 5.37
Metatranscriptomes 0
Isolates 94.63

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 87.75
Rhizoplane 0.14
Rhizosphere 0.14
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10037370 3300003316 Bacteria 1747
2 rootH1_10037370 3300003323 Bacteria 11142
3 Ga0099825_1029145 3300006941 Bacteria 2600
4 Ga0099824_1008694 3300006942 Bacteria 12863
5 Ga0099824_1010794 3300006942 Bacteria 10585
6 Ga0099822_1006996 3300006943 Bacteria 14646
7 Ga0099822_1008615 3300006943 Bacteria 13010
8 Ga0123340_1022335 3300009763 Bacteria 4736
9 Ga0123342_1033993 3300009766 Bacteria 2274
10 Ga0182008_10024085 3300014497 Bacteria 3101
11 Ga0214544_1002974 3300021320 Bacteria 35416
12 Ga0214544_1004916 3300021320 Bacteria 26374
13 Ga0214544_1020942 3300021320 Bacteria 4458
14 Ga0214542_1002711 3300021321 Bacteria 36444
15 Ga0214542_1022614 3300021321 Bacteria 3983
16 Ga0214545_1002344 3300021324 Bacteria 36444
17 Ga0214545_1023667 3300021324 Bacteria 3983
18 Ga0214543_1002448 3300021327 Bacteria 36444
19 Ga0214543_1003085 3300021327 Bacteria 32523
20 Ga0214543_1022495 3300021327 Bacteria 4457
21 Ga0228711_1012075 3300022739 Bacteria 10725
22 Ga0228710_1002177 3300022740 Bacteria 30635
23 Ga0228710_1003379 3300022740 Bacteria 25416
24 Ga0209281_1000793 3300027111 Bacteria 29754
25 Ga0209389_1000101 3300027296 Bacteria 78525
26 Ga0209389_1000204 3300027296 Bacteria 42757
27 Ga0209589_1000139 3300027357 Bacteria 78582
28 Ga0209489_100009 3300027361 Bacteria 263873
29 Ga0209489_103337 3300027361 Bacteria 31450
30 Ga0209700_100026 3300027363 Bacteria 224498
31 Ga0209282_1000226 3300027666 Bacteria 29263
32 Ga0209282_1000428 3300027666 Bacteria 20688
33 Ga0315914_1002565 3300031967 Bacteria 27789
34 Ga0315914_1027320 3300031967 Bacteria 3399
35 Ga0315913_1032479 3300033430 Bacteria 3514
36 Ga0315913_1033213 3300033430 Bacteria 3400
37 Ga0315911_1000016 3300033442 Bacteria 166408
38 Ga0315915_1001267 3300033464 Bacteria 30148
39 Ga0315915_1001375 3300033464 Bacteria 29325
40 2516210220 2516143018 Bacteria 6951533
41 2509073898 2508501114 Bacteria 7082538
42 2509111536 2508501122 Bacteria 6292184
43 2509111539 2508501122 Bacteria 6292184
44 2509116939 2508501123 Bacteria 6283661
45 2509150686 2508501128 Bacteria 8613869
46 2510246380 2510065045 Bacteria 7761063
47 2510308636 2510065057 Bacteria 6649661
48 2511499602 2511231052 Bacteria 6974333
49 2511499623 2511231052 Bacteria 6974333
50 2511503756 2511231052 Bacteria 6974333
51 2512974656 2512875026 Bacteria 6861065
52 2512975566 2512875026 Bacteria 6861065
53 2513572731 2513237084 Bacteria 7231967
54 2513581485 2513237085 Bacteria 7695351
55 2513587581 2513237086 Bacteria 7265287
56 2513599630 2513237088 Bacteria 6927906
57 2513607338 2513237089 Bacteria 6553624
58 2513607536 2513237089 Bacteria 6553624
59 2513613097 2513237090 Bacteria 7096802
60 2513619507 2513237091 Bacteria 6900273
61 2513621348 2513237091 Bacteria 6900273
62 2513622739 2513237092 Bacteria 8341956
63 2513641652 2513237094 Bacteria 8789602
64 2513641681 2513237094 Bacteria 8789602
65 2513652851 2513237095 Bacteria 8976980
66 2513660832 2513237096 Bacteria 8722461
67 2513679543 2513237098 Bacteria 9902361
68 2513698503 2513237101 Bacteria 7952346
69 2513698505 2513237101 Bacteria 7952346
70 2513713874 2513237103 Bacteria 7647401
71 2513719984 2513237104 Bacteria 10034502
72 2513863513 2513237137 Bacteria 9558895
73 2513871076 2513237138 Bacteria 7368160
74 2513879447 2513237139 Bacteria 8737671
75 2513883413 2513237140 Bacteria 7076289
76 2513883479 2513237140 Bacteria 7076289
77 2513885700 2513237140 Bacteria 7076289
78 2513894067 2513237141 Bacteria 8496279
79 2513894068 2513237141 Bacteria 8496279
80 2513907138 2513237143 Bacteria 6664116
81 2513907168 2513237143 Bacteria 6664116
82 2513907306 2513237143 Bacteria 6664116
83 2513922652 2513237145 Bacteria 8979722
84 2513989437 2513237156 Bacteria 6402557
85 2513989488 2513237156 Bacteria 6402557
86 2513998638 2513237159 Bacteria 6810126
87 2513998639 2513237159 Bacteria 6810126
88 2514008711 2513237160 Bacteria 6650282
89 2514008788 2513237160 Bacteria 6650282
90 2514017372 2513237161 Bacteria 8871253
91 2514024543 2513237162 Bacteria 7468464
92 2515109836 2515075009 Bacteria 7288508
93 2515611137 2515154107 Bacteria 6795637
94 2515611217 2515154107 Bacteria 6795637
95 2515612712 2515154107 Bacteria 6795637
96 2515637664 2515154113 Bacteria 7807172
97 2515646973 2515154114 Bacteria 7848616
98 2515661567 2515154116 Bacteria 7552979
99 2515685630 2515154122 Bacteria 8609520
100 2516210205 2516143018 Bacteria 6951533
101 2516210268 2516143018 Bacteria 6951533
102 2516210294 2516143018 Bacteria 6951533
103 2516897111 2516653046 Bacteria 6989037
104 2516897163 2516653046 Bacteria 6989037
105 2517040955 2516653077 Bacteria 7555578
106 2517108385 2517093001 Bacteria 9002274
107 2517567154 2517487022 Bacteria 7227575
108 2517567308 2517487022 Bacteria 7227575
109 2517890661 2517572143 Bacteria 9484767
110 2524442339 2524023205 Bacteria 8918781
111 2524443031 2524023205 Bacteria 8918781
112 2524443159 2524023205 Bacteria 8918781
113 2524454121 2524023207 Bacteria 6813453
114 2524454617 2524023207 Bacteria 6813453
115 2528855885 2528768022 Bacteria 10457665
116 2551677710 2551306084 Bacteria 8942552
117 2551678979 2551306084 Bacteria 8942552
118 2551683081 2551306085 Bacteria 7347181
119 2551685350 2551306085 Bacteria 7347181
120 2551694025 2551306086 Bacteria 6843938
121 2551702247 2551306087 Bacteria 7351905
122 2551714608 2551306089 Bacteria 7162724
123 2551717386 2551306090 Bacteria 7953713
124 2551719450 2551306090 Bacteria 7953713
125 2551729991 2551306091 Bacteria 7086830
126 2551734587 2551306092 Bacteria 6992595
127 2551734879 2551306092 Bacteria 6992595
128 2551738004 2551306092 Bacteria 6992595
129 2551740334 2551306093 Bacteria 7064773
130 2561467592 2558860983 Bacteria 4133860
131 2617353893 2617270735 Bacteria 9163226
132 2617379343 2617270741 Bacteria 8201522
133 2657686733 2657244999 Bacteria 5946535
134 2688601170 2687453392 Bacteria 6880454
135 2688601172 2687453392 Bacteria 6880454
136 2692320807 2690316117 Bacteria 6800650
137 2719644279 2718217991 Bacteria 7829542
138 2719644303 2718217991 Bacteria 7829542
139 2723844485 2721755755 Bacteria 8322773
140 2723844486 2721755755 Bacteria 8322773
141 2728751396 2728368998 Bacteria 8720350
142 2728751397 2728368998 Bacteria 8720350
143 2739037507 2738541333 Bacteria 7106503
144 2745075213 2744054633 Bacteria 8678936
145 2745079713 2744054633 Bacteria 8678936
146 2745081436 2744054633 Bacteria 8678936
147 2753462920 2751185821 Bacteria 6189929
148 2753569218 2751185846 Bacteria 7242164
149 2774873604 2773857925 Bacteria 6472445
150 2792581351 2791355082 Bacteria 5973319
151 2792624291 2791355091 Bacteria 6135441
152 2792624600 2791355091 Bacteria 6135441
153 2792624784 2791355091 Bacteria 6135441
154 2792630169 2791355092 Bacteria 6248105
155 2792630431 2791355092 Bacteria 6248105
156 2792630837 2791355092 Bacteria 6248105
157 2792841341 2791355137 Bacteria 9654227
158 2793071682 2791355197 Bacteria 8420563
159 2793083248
160 2793083249
161 2802721825 2802428858 Bacteria 6636079
162 2802721856 2802428858 Bacteria 6636079
163 2802728491 2802428859 Bacteria 6667919
164 2802728558 2802428859 Bacteria 6667919
165 2802734706 2802428860 Bacteria 6525526
166 2802734779 2802428860 Bacteria 6525526
167 2802741153 2802428861 Bacteria 6534206
168 2802741245 2802428861 Bacteria 6534206
169 2802747471 2802428862 Bacteria 6633353
170 2802747502 2802428862 Bacteria 6633353
171 2802753777 2802428863 Bacteria 6410669
172 2802753839 2802428863 Bacteria 6410669
173 2804750538 2802429268 Bacteria 6094027
174 2805917340 2802429603 Bacteria 8777136
175 2805930732 2802429605 Bacteria 6875453
176 2805930733 2802429605 Bacteria 6875453
177 2818243612 2816332527 Bacteria 8933356
178 2824601142 2824600985 Bacteria 8488197
179 2824609470 2824609381 Bacteria 8672835
180 2824618252 2824617872 Bacteria 8814715
181 2824627041 2824626560 Bacteria 8813858
182 2824635290 2824635225 Bacteria 8785348
183 2824644129 2824644064 Bacteria 8743947
184 2824654635 2824653114 Bacteria 8493680
185 2824662666 2824661429 Bacteria 9877870
186 2824671414 2824671348 Bacteria 8369588
187 2824683811 2824679649 Bacteria 8248951
188 2824688109 2824687955 Bacteria 8360029
189 2824696839 2824696289 Bacteria 8335049
190 2824704736 2824704595 Bacteria 9667483
191 2824714800 2824714736 Bacteria 8717648
192 2824724135 2824723954 Bacteria 8758240
193 2824733492 2824732956 Bacteria 7810675
194 2824749386 2824746037 Bacteria 7911610
195 2824754738 2824753945 Bacteria 9787441
196 2824764489 2824763712 Bacteria 9792355
197 2824778824 2824773399 Bacteria 8360218
198 2835313462 2835312727 Bacteria 7413381
199 2835318228 2835312727 Bacteria 7413381
200 2838042212 2838035591 Bacteria 7166484
201 2838042231 2838035591 Bacteria 7166484
202 2838080458 2838074704 Bacteria 6785777
203 2838129866 2838122688 Bacteria 8803140
204 2838665498 2838661181 Bacteria 7385261
205 2838665504 2838661181 Bacteria 7385261
206 2838668412 2838661181 Bacteria 7385261
207 2838691175 2838686498 Bacteria 7807632
208 2841946029 2841941048 Bacteria 8688029
209 2841955202 2841949485 Bacteria 8680857
210 2841963750 2841957949 Bacteria 8652217
211 2841972641 2841966195 Bacteria 8673214
212 2841976809 2841974524 Bacteria 8931498
213 2841986086 2841983080 Bacteria 8395090
214 2842115279 2842110456 Bacteria 7656360
215 2842275650 2842271015 Bacteria 7807131
216 2842524280 2842521101 Bacteria 6569494
217 2842524281 2842521101 Bacteria 6569494
218 2844462032 2844454524 Bacteria 7952546
219 2847421823 2847417321 Bacteria 6913799
220 2847933419 2847930680 Bacteria 9342022
221 2847940481 2847939898 Bacteria 8606328
222 2848996595 2848992105 Bacteria 6810864
223 2852392470 2852387548 Bacteria 8025568
224 2852392576 2852387548 Bacteria 8025568
225 2854920684 2854916844 Bacteria 5725939
226 2855830972 2855825444 Bacteria 6785811
227 2855830992 2855825444 Bacteria 6785811
228 2855831039 2855825444 Bacteria 6785811
229 2855845235 2855839649 Bacteria 7135830
230 2855845287 2855839649 Bacteria 7135830
231 2855876873 2855872281 Bacteria 6964271
232 2874605900 2874604998 Bacteria 7834745
233 2874605901 2874604998 Bacteria 7834745
234 2874617042 2874612657 Bacteria 8252029
235 2874623852 2874620515 Bacteria 8290088
236 2876366058 2876363079 Bacteria 6544991
237 2876370682 2876369609 Bacteria 6807521
238 2876765120 2876761206 Bacteria 10111113
239 2876768080 2876761206 Bacteria 10111113
240 2876769836 2876761206 Bacteria 10111113
241 2876815336 2876808645 Bacteria 8824342
242 2876817859 2876808645 Bacteria 8824342
243 2879088781 2879083081 Bacteria 8587928
244 2879113844 2879110137 Bacteria 8907982
245 2879113845 2879110137 Bacteria 8907982
246 2881163850 2881161766 Bacteria 7127907
247 2881163853 2881161766 Bacteria 7127907
248 2881669517 2881665667 Bacteria 8175609
249 2882463836 2882456835 Bacteria 6863978
250 2885272043 2885270888 Bacteria 9831543
251 2885272049 2885270888 Bacteria 9831543
252 2885371572 2885366525 Bacteria 8326213
253 2885378399 2885374607 Bacteria 8927485
254 2885390562 2885383462 Bacteria 9473874
255 2885413684 2885409591 Bacteria 9235467
256 2885413685 2885409591 Bacteria 9235467
257 2888349949 2888343758 Bacteria 6611049
258 2888351573 2888350351 Bacteria 7372807
259 2888386754 2888378607 Bacteria 9652610
260 2889041453 2889033259 Bacteria 9099371
261 2889041455 2889033259 Bacteria 9099371
262 2896391429 2896384573 Bacteria 7700774
263 2902687547 2902682994 Bacteria 8951596
264 2903526167 2903521522 Bacteria 6525694
265 2903530456 2903528002 Bacteria 6586099
266 2903752273 2903748898 Bacteria 9972761
267 2903774679 2903768456 Bacteria 9749579
268 2904617789 2904615490 Bacteria 10047340
269 2904672619 2904666416 Bacteria 8226587
270 2904693740 2904690495 Bacteria 9412302
271 2904710693
272 2904713944 2904711408 Bacteria 9771557
273 2906646884 2906643746 Bacteria 8722424
274 2906664740 2906660503 Bacteria 8595048
275 2908739933 2908739725 Bacteria 8628932
276 2908763295 2908756301 Bacteria 8864324
277 2908777831 2908775508 Bacteria 8092255
278 2915985369 2915980308 Bacteria 6624279
279 2915986681 2915980308 Bacteria 6624279
280 2915989073 2915986958 Bacteria 6739310
281 2915990078 2915986958 Bacteria 6739310
282 2915995621 2915993759 Bacteria 7016183
283 2915999816 2915993759 Bacteria 7016183
284 2916002325 2916000859 Bacteria 6865702
285 2916002406 2916000859 Bacteria 6865702
286 2916003136 2916000859 Bacteria 6865702
287 2916008863 2916007675 Bacteria 6898660
288 2916010307 2916007675 Bacteria 6898660
289 2916011738 2916007675 Bacteria 6898660
290 2916015645 2916014648 Bacteria 6946486
291 2916017289 2916014648 Bacteria 6946486
292 2916022234 2916021584 Bacteria 6854472
293 2916023117 2916021584 Bacteria 6854472
294 2916029476 2916028427 Bacteria 6748433
295 2916034453 2916028427 Bacteria 6748433
296 2916035204 2916028427 Bacteria 6748433
297 2916036066 2916035215 Bacteria 6755766
298 2916036294 2916035215 Bacteria 6755766
299 2916041835 2916035215 Bacteria 6755766
300 2916042377 2916041962 Bacteria 6820487
301 2916048615 2916041962 Bacteria 6820487
302 2916054696 2916048683 Bacteria 6543552
303 2916055085 2916048683 Bacteria 6543552
304 2916060738 2916055098 Bacteria 6758838
305 2916060773 2916055098 Bacteria 6758838
306 2916060819 2916055098 Bacteria 6758838
307 2916063148 2916061851 Bacteria 6737736
308 2916067695 2916061851 Bacteria 6737736
309 2916075945 2916068649 Bacteria 6943657
310 2916077094 2916076590 Bacteria 6596108
311 2916079756 2916076590 Bacteria 6596108
312 2920829064 2920822456 Bacteria 6897201
313 2921204616 2921201388 Bacteria 6926299
314 2921206988 2921201388 Bacteria 6926299
315 2921209453 2921208531 Bacteria 6745326
316 2921211435 2921208531 Bacteria 6745326
317 2921237585 2921237296 Bacteria 6876710
318 2921239426 2921237296 Bacteria 6876710
319 2921244624 2921244191 Bacteria 6568419
320 2921245592 2921244191 Bacteria 6568419
321 2921248928 2921244191 Bacteria 6568419
322 2921255404 2921250672 Bacteria 6677771
323 2921256529 2921250672 Bacteria 6677771
324 2921258074 2921257292 Bacteria 6808382
325 2921260717 2921257292 Bacteria 6808382
326 2921264685 2921263974 Bacteria 6864552
327 2921264727 2921263974 Bacteria 6864552
328 2921265290 2921263974 Bacteria 6864552
329 2921283630 2921282425 Bacteria 6826397
330 2921284224 2921282425 Bacteria 6826397
331 2921285466 2921282425 Bacteria 6826397
332 2921292690 2921289301 Bacteria 7316391
333 2921296364 2921289301 Bacteria 7316391
334 2921299492 2921296804 Bacteria 7176999
335 2921300710 2921296804 Bacteria 7176999
336 2922363099 2922361189 Bacteria 7436256
337 2922393232 2922386360 Bacteria 7017218
338 2922393233 2922386360 Bacteria 7017218
339 2922398098 2922393267 Bacteria 8285685
340 2924144902 2924144063 Bacteria 6883928
341 2924150864 2924144063 Bacteria 6883928
342 2924150894 2924144063 Bacteria 6883928
343 2924152922 2924150972 Bacteria 7169444
344 2924157336 2924150972 Bacteria 7169444
345 2924163648 2924158325 Bacteria 7188855
346 2924164856 2924158325 Bacteria 7188855
347 2924166648 2924165586 Bacteria 7260590
348 2924172678 2924165586 Bacteria 7260590
349 2924174093 2924172951 Bacteria 6749356
350 2924178888 2924172951 Bacteria 6749356
351 2924179164 2924172951 Bacteria 6749356
352 2924180958 2924179722 Bacteria 6843264
353 2924181037 2924179722 Bacteria 6843264
354 2924184117 2924179722 Bacteria 6843264
355 2924186883 2924186466 Bacteria 6876637
356 2924193057 2924186466 Bacteria 6876637
357 2924194183 2924193448 Bacteria 6955718
358 2924195041 2924193448 Bacteria 6955718
359 2924201215 2924200457 Bacteria 6757188
360 2924205394 2924200457 Bacteria 6757188
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MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00126

HTH_1

Bacterial regulatory helix-turn-helix protein, lysR family

4

63

0.97

PF03466

LysR_substrate

LysR substrate binding domain

88

294

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ihs-assembly1.cif.gz_A crystal structure of benm_dbd/catb site 1 dna complex 0.9232 6 88
6kju-assembly1.cif.gz_B huge conformation shift of vibrio cholerae vqma dimer in the absence of target dna provides insight into dna-binding mechanisms of luxr-type receptors 0.918 6 50
6ugl-assembly1.cif.gz_A vqma bound to dpo 0.9119 6 50
4wul-assembly1.cif.gz_A crystal structure of e. faecalis dna binding domain liard191n complexed with 26bp dna 0.9098 6 51
6kju-assembly1.cif.gz_A huge conformation shift of vibrio cholerae vqma dimer in the absence of target dna provides insight into dna-binding mechanisms of luxr-type receptors 0.9095 6 50
ID Description Score Start End Superfamily
af_O50442_408_536_1.10.10.2840 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;PucR C-terminal helix-turn-helix domain 0.9663 10 52 1.10.10.2840
af_P52696_4_93_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.951 7 87 1.10.10.10
af_P36771_5_92_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.95 5 86 1.10.10.10
af_P9WMF7_1_79_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9445 6 83 1.10.10.10
af_P77171_5_91_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9427 4 83 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A0F4JEL2-F1-model_v4 LysR family transcriptional regulator 0.9352 6 81 GO:0003677
GO:0003700
GO:0032993
AF-A0A0F4JEL2-F1-model_v4 LysR family transcriptional regulator 0.9127 6 81 GO:0003677
GO:0003700
GO:0032993
AF-A0A376JFC9-F1-model_v4 deleted 0.9108 6 88
AF-D0X1P8-F1-model_v4 deleted 0.906 161 303
AF-D0X1P8-F1-model_v4 deleted 0.8883 161 303

Map