F447428

General Info

Members Datasets Scaffolds Average Seq Length
454 198 389 318

Family's Representative Sequence

Representative Sequence 3300041405|Ga0439438_017359|Ga0439438_017359_230_1312
Length 360
Sequence MHYRFVPMYDRRFADTLITCTGTFPNSMAVCRVANLMNRNDLRRADINLLVVFETMMHERNVSRVGEKLFLGQPTISGALGRLRVLFDDPLFIRCGRVMEPTARAEEIFANLAPALDGIAAALSRCQSFDPRTSDTTFHIGLSDDVEYALLPRLLRQLRIEAPNIKLIMLRVDQQQMSQRLVNGDISVGISHTLDLPASARRKGLRQIRPTLLRFDTRPGPLALDEFCRRPHVVVSSMGNALDDTDHALNLLGRQRKVVLTVPQFSALPGLLAQSDMLAIVPDYVAKAMASVAGIRVEPAPLQLPVHELSMVWRAAAHADSSQRWLRSRCSAFLSEPVELQVVPKSRPALRSDQALLAAR

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2511231010 Pseudomonas sp. GM25 Isolate Nodule
3 2511231014 Pseudomonas sp. GM48 Isolate Nodule
4 2511231015 Pseudomonas sp. GM49 Isolate Nodule
5 2511231016 Pseudomonas sp. GM50 Isolate Nodule
6 2511231020 Pseudomonas sp. GM74 Isolate Nodule
7 2511231022 Pseudomonas sp. GM79 Isolate Nodule
8 2511231156 Pseudomonas ogarae F113 Isolate Rhizosphere
9 2599185212 Pseudomonas sp. NFACC15-1 Isolate Rhizoplane
10 2599185300 Pseudomonas sp. NFACC39-1 Isolate Rhizoplane
11 2599185302 Pseudomonas sp. NFACC43 Isolate Rhizoplane
12 2599185304 Pseudomonas sp. NFACC47-1 Isolate Rhizoplane
13 2599185306 Pseudomonas sp. NFACC16-2 Isolate Rhizoplane
14 2599185308 Pseudomonas sp. NFACC17-2 Isolate Rhizoplane
15 2599185309 Pseudomonas sp. NFACC49-2 Isolate Rhizoplane
16 2599185310 Pseudomonas sp. NFACC09-4 Isolate Rhizoplane
17 2599185311 Pseudomonas sp. NFACC04-2 Isolate Rhizoplane
18 2599185312 Pseudomonas sp. NFACC32-1 Isolate Rhizoplane
19 2599185313 Pseudomonas sp. NFACC05-1 Isolate Rhizoplane
20 2599185314 Pseudomonas sp. NFACC23-1 Isolate Rhizoplane
21 2599185316 Pseudomonas sp. NFACC52 Isolate Rhizoplane
22 2599185317 Pseudomonas sp. NFACC06-1 Isolate Rhizoplane
23 2599185319 Pseudomonas sp. NFACC24-1 Isolate Rhizoplane
24 2599185320 Pseudomonas sp. NFACC36 Isolate Rhizoplane
25 2599185322 Pseudomonas sp. NFACC14 Isolate Rhizoplane
26 2599185323 Pseudomonas sp. NFACC37-1 Isolate Rhizoplane
27 2599185325 Pseudomonas sp. NFACC56-3 Isolate Rhizoplane
28 2600254930 Pseudomonas sp. NFIX10 Isolate Rhizoplane
29 2600255318 Pseudomonas putida NFIX47 Isolate Rhizoplane
30 2603880185 Pseudomonas sp. NFIX46 Isolate Rhizoplane
31 2603880199 Pseudomonas sp. NFIX49 Isolate Rhizoplane
32 2623620443 Pseudomonas sp. DR 5-09 Isolate Unclassified
33 2643221565 Pseudomonas sp. Root562 Isolate Unclassified
34 2643221650 Pseudomonas sp. Root401 Isolate Unclassified
35 2667528176 Pseudomonas sp. NFACC11-2 Isolate Rhizoplane
36 2675903515 Pseudomonas thivervalensis DSM 13194 Isolate Unclassified
37 2713897149 Pseudomonas fluorescens SF4c Isolate Rhizosphere
38 2738543015 Pseudomonas sp. GV041 Isolate Unclassified
39 2744054620 Pseudomonas thivervalensis LMG 21626 Isolate Unclassified
40 2765235841 Pseudomonas putida AA7 Isolate Unclassified
41 2791355520 Pseudomonas sp. s211(2017) Isolate Unclassified
42 2808606361 Pseudomonas sp. SJZ075 Isolate Rhizosphere
43 2808606376 Pseudomonas sp. SJZ074 Isolate Rhizosphere
44 2808606377 Pseudomonas sp. SJZ083 Isolate Rhizosphere
45 2808606378 Pseudomonas sp. SJZ078 Isolate Rhizosphere
46 2808606380 Pseudomonas sp. SJZ085 Isolate Rhizosphere
47 2808606381 Pseudomonas sp. SJZ077 Isolate Rhizosphere
48 2808606383 Pseudomonas sp. SJZ124 Isolate Rhizosphere
49 2808606389 Pseudomonas sp. SJZ101 Isolate Rhizosphere
50 2825651385 Pseudomonas brassicacearum L13-6-12 Isolate Rhizosphere
51 2842854478 Pseudomonas sp. R-71998 Isolate Unclassified
52 2878029506 Pseudomonas fluorescens DR397 Isolate Rhizosphere
53 2919063839 Pseudomonas pharyngis 1098 Isolate Rhizosphere
54 2919481497 Pseudomonas brassicacearum 3432 Isolate Unclassified
55 2919501602 Pseudomonas alcaliphila 3512 Isolate Unclassified
56 2926063275 Pseudomonas sp. 3400 Isolate Unclassified
57 2929144301 Pseudomonas sp. R-71838 Hybrid assembly Isolate Unclassified
58 2988728565 Pseudomonas corrugata RM1-1-4 Isolate Rhizosphere
59 3007803356 Pseudomonas sp. CM27 Isolate Unclassified
60 3007861166 Pseudomonas hamedanensis SWRI65 Isolate Rhizosphere
61 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
62 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
63 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
64 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
65 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
66 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
67 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
68 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
69 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
70 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
71 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
72 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
73 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
74 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
75 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
76 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
77 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
78 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
79 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
80 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
81 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
82 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
83 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
84 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
85 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
86 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
89 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
95 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
96 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
98 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
99 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
100 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
101 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
102 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
103 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
104 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
105 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
106 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
107 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
108 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
109 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
110 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
111 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
112 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
113 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
114 3300042139 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0727L_E14_072516_1442 Metagenome Rhizosphere
115 3300042142 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_072516_1610 Metagenome Rhizosphere
116 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
117 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
118 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
119 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
120 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
121 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
122 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
123 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
124 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
125 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
126 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
127 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
128 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
129 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
130 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
131 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
132 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
133 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
134 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
135 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
136 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
137 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
138 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
139 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
140 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
141 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
142 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
143 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
144 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
145 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
146 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
147 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
148 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
149 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
150 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
151 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
152 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
153 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
154 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
155 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
156 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
157 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
158 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
159 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
160 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
161 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
162 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
163 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
164 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
165 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
166 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
167 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
168 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
169 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
170 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
171 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
172 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
173 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
174 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
175 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
176 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
177 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
178 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
179 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
180 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
181 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
182 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
183 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
184 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
185 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
186 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
187 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
188 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
189 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
190 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
191 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
192 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
193 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
194 3300053135 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 endosphere Metagenome Endosphere
195 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
196 8052494512 Pseudomonas putida LD6 Isolate Unclassified
197 8056143049 Pseudomonas alvandae SWRI17 Isolate Rhizosphere
198 8056177738 Pseudomonas azerbaijanoccidentalis SWRI74 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.68
Metatranscriptomes 0
Isolates 14.32

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.96
Nodule 1.98
Rhizoplane 7.05
Rhizosphere 78.85
Stem 0
Stem Tuber 0
Unclassified 8.15

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_409764 2162886007 Bacteria 5122
2 Ga0055536_1000013 3300003781 Bacteria 240693
3 Ga0055530_10001135 3300003791 Bacteria 20743
4 Ga0055540_1000008 3300003792 Bacteria 309635
5 Ga0055531_10000242 3300003794 Bacteria 59638
6 Ga0065714_10002248 3300005288 Bacteria 43256
7 Ga0065714_10002443 3300005288 Bacteria 27653
8 Ga0065714_10003703 3300005288 Bacteria 6320
9 Ga0065714_10081103 3300005288 Bacteria 2398
10 Ga0065704_10072540 3300005289 Bacteria 8351
11 Ga0070665_100230990 3300005548 Bacteria 1850
12 Ga0070664_100049853 3300005564 Bacteria 3542
13 Ga0068852_100578836 3300005616 Bacteria 1125
14 Ga0075364_10005632 3300006051 Bacteria 7303
15 Ga0075364_10093421 3300006051 Bacteria 1997
16 Ga0075432_10007881 3300006058 Bacteria 3631
17 Ga0075432_10010404 3300006058 Bacteria 3156
18 Ga0075362_10004382 3300006177 Bacteria 5064
19 Ga0075436_100109369 3300006914 Bacteria 1929
20 Ga0099823_1000032 3300006944 Bacteria 69029
21 Ga0099823_1051314 3300006944 Bacteria 2503
22 Ga0105251_10001292 3300009011 Bacteria 21644
23 Ga0105251_10001539 3300009011 Bacteria 19800
24 Ga0105251_10010457 3300009011 Bacteria 5382
25 Ga0105244_10001705 3300009036 Bacteria 17355
26 Ga0105244_10006023 3300009036 Bacteria 7944
27 Ga0105244_10057690 3300009036 Bacteria 1961
28 Ga0105250_10014856 3300009092 Bacteria 3193
29 Ga0105250_10015781 3300009092 Bacteria 3090
30 Ga0157373_10016072 3300013100 Bacteria 5462
31 Ga0157373_10041082 3300013100 Bacteria 3308
32 Ga0157371_10000039 3300013102 Bacteria 207724
33 Ga0157371_10000084 3300013102 Bacteria 149557
34 Ga0157371_10003429 3300013102 Bacteria 14393
35 Ga0157370_10001470 3300013104 Bacteria 29126
36 Ga0163162_10020857 3300013306 Bacteria 6443
37 Ga0157375_10068989 3300013308 Bacteria 3540
38 Ga0182008_10001402 3300014497 Bacteria 16218
39 Ga0182008_10002046 3300014497 Bacteria 12931
40 Ga0182008_10002470 3300014497 Bacteria 11567
41 Ga0182008_10096383 3300014497 Bacteria 1460
42 Ga0182006_1030359 3300015261 Bacteria 2184
43 Ga0182006_1045027 3300015261 Bacteria 1719
44 Ga0163161_10006007 3300017792 Bacteria 8413
45 Ga0209676_1000002 3300025292 Bacteria 1732948
46 Ga0209050_1000006 3300025298 Bacteria 1359702
47 Ga0209051_1000001 3300025303 Bacteria 1732974
48 Ga0209257_1000029 3300025304 Bacteria 695617
49 Ga0207696_1000011 3300025711 Bacteria 530614
50 Ga0207696_1000830 3300025711 Bacteria 19705
51 Ga0207696_1023600 3300025711 Bacteria 1939
52 Ga0207655_1000148 3300025728 Bacteria 130207
53 Ga0207655_1000345 3300025728 Bacteria 67451
54 Ga0207655_1032335 3300025728 Bacteria 2392
55 Ga0207713_1000243 3300025735 Bacteria 70146
56 Ga0207713_1001144 3300025735 Bacteria 22477
57 Ga0207713_1001298 3300025735 Bacteria 20557
58 Ga0207713_1013615 3300025735 Bacteria 4276
59 Ga0207713_1016567 3300025735 Bacteria 3736
60 Ga0207713_1019323 3300025735 Bacteria 3338
61 Ga0207713_1020820 3300025735 Bacteria 3163
62 Ga0207698_10440678 3300026142 Bacteria 1255
63 Ga0209389_1000122 3300027296 Bacteria 70324
64 Ga0207428_10009833 3300027907 Bacteria 8569
65 Ga0207428_10029491 3300027907 Bacteria 4547
66 Ga0207428_10069116 3300027907 Bacteria 2777
67 Ga0268266_10392310 3300028379 Bacteria 1311
68 Ga0307408_100000085 3300031548 Bacteria 104335
69 Ga0307408_100002973 3300031548 Bacteria 11740
70 Ga0307408_100015618 3300031548 Bacteria 5057
71 Ga0307405_10000375 3300031731 Bacteria 16753
72 Ga0307405_10027975 3300031731 Bacteria 3277
73 Ga0307405_10038649 3300031731 Bacteria 2879
74 Ga0307406_10351137 3300031901 Bacteria 1152
75 Ga0307407_10008788 3300031903 Bacteria 4662
76 Ga0307412_10001395 3300031911 Bacteria 13422
77 Ga0307412_10003870 3300031911 Bacteria 8328
78 Ga0307412_10011147 3300031911 Bacteria 5198
79 Ga0307416_100610870 3300032002 Bacteria 1171
80 Ga0307414_10013158 3300032004 Bacteria 4918
81 Ga0307414_10035478 3300032004 Bacteria 3319
82 Ga0307414_10510165 3300032004 Bacteria 1065
83 Ga0307411_10074257 3300032005 Bacteria 2316
84 Ga0307411_10146492 3300032005 Bacteria 1748
85 Ga0439438_000077 3300041405 Bacteria 45928
86 Ga0439438_000205 3300041405 Bacteria 26994
87 Ga0439438_017359 3300041405 Bacteria 2073
88 Ga0439438_030128 3300041405 Bacteria 1448
89 Ga0439447_000287 3300041407 Bacteria 17989
90 Ga0439466_0000073 3300041411 Bacteria 39755
91 Ga0439466_0006919 3300041411 Bacteria 4300
92 Ga0439466_0016307 3300041411 Bacteria 2686
93 Ga0439432_009185 3300042006 Bacteria 3452
94 Ga0439432_009959 3300042006 Bacteria 3304
95 Ga0439432_045598 3300042006 Bacteria 1378
96 Ga0439451_000086 3300042009 Bacteria 16449
97 Ga0439451_000354 3300042009 Bacteria 8933
98 Ga0439452_000239 3300042010 Bacteria 38013
99 Ga0439456_003278 3300042013 Bacteria 3274
100 Ga0439463_001755 3300042016 Bacteria 5644
101 Ga0439463_008417 3300042016 Bacteria 2543
102 Ga0439463_027633 3300042016 Bacteria 1429
103 Ga0450903_007715 3300042138 Bacteria 1766
104 Ga0450904_000079 3300042139 Bacteria 22089
105 Ga0450905_000178 3300042142 Bacteria 7038
106 Ga0450905_001014 3300042142 Bacteria 3526
107 Ga0450906_017340 3300042145 Bacteria 1299
108 Ga0439440_0005870 3300042993 Bacteria 2450
109 Ga0466963_0160521 3300044694 Bacteria 1564
110 Ga0495617_002338 3300046452 Bacteria 7618
111 Ga0495617_005798 3300046452 Bacteria 4360
112 Ga0495617_007810 3300046452 Bacteria 3702
113 Ga0495627_010964 3300046453 Bacteria 3270
114 Ga0495627_011104 3300046453 Bacteria 3244
115 Ga0495627_037741 3300046453 Bacteria 1497
116 Ga0495603_0031794 3300046455 Bacteria 3177
117 Ga0495590_0000608 3300046457 Bacteria 16765
118 Ga0495590_0010123 3300046457 Bacteria 3557
119 Ga0495590_0010928 3300046457 Bacteria 3402
120 Ga0495590_0050536 3300046457 Bacteria 1451
121 Ga0495591_000049 3300046458 Bacteria 138951
122 Ga0495591_000504 3300046458 Bacteria 30725
123 Ga0495591_002870 3300046458 Bacteria 9253
124 Ga0495591_003386 3300046458 Bacteria 8263
125 Ga0495591_004919 3300046458 Bacteria 6345
126 Ga0495591_022276 3300046458 Bacteria 2051
127 Ga0495638_0000088 3300046460 Bacteria 152517
128 Ga0495638_0000842 3300046460 Bacteria 32131
129 Ga0495638_0001095 3300046460 Bacteria 26399
130 Ga0495638_0001557 3300046460 Bacteria 20584
131 Ga0495638_0008344 3300046460 Bacteria 7348
132 Ga0495638_0008931 3300046460 Bacteria 7067
133 Ga0495638_0016025 3300046460 Bacteria 5023
134 Ga0495638_0021296 3300046460 Bacteria 4274
135 Ga0495638_0027206 3300046460 Bacteria 3703
136 Ga0495638_0047110 3300046460 Bacteria 2704
137 Ga0495653_0000344 3300046463 Bacteria 37880
138 Ga0495650_0000902 3300046471 Bacteria 34966
139 Ga0495650_0001581 3300046471 Bacteria 21346
140 Ga0495650_0007625 3300046471 Bacteria 6462
141 Ga0495650_0007648 3300046471 Bacteria 6445
142 Ga0495650_0028862 3300046471 Bacteria 2537
143 Ga0495650_0033442 3300046471 Bacteria 2288
144 Ga0495605_0000067 3300046474 Bacteria 138871
145 Ga0495605_0000145 3300046474 Bacteria 91308
146 Ga0495605_0001159 3300046474 Bacteria 17481
147 Ga0495605_0001374 3300046474 Bacteria 16004
148 Ga0495605_0001451 3300046474 Bacteria 15521
149 Ga0495605_0010146 3300046474 Bacteria 5275
150 Ga0495605_0011814 3300046474 Bacteria 4860
151 Ga0495605_0018643 3300046474 Bacteria 3715
152 Ga0495605_0110560 3300046474 Bacteria 1254
153 Ga0495584_0000063 3300046491 Bacteria 76679
154 Ga0495584_0000438 3300046491 Bacteria 28666
155 Ga0495584_0001096 3300046491 Bacteria 16810
156 Ga0495584_0001403 3300046491 Bacteria 14498
157 Ga0495584_0013533 3300046491 Bacteria 4165
158 Ga0495584_0018409 3300046491 Bacteria 3549
159 Ga0495584_0027723 3300046491 Bacteria 2870
160 Ga0495585_0000253 3300046492 Bacteria 55394
161 Ga0495585_0000490 3300046492 Bacteria 37630
162 Ga0495585_0000498 3300046492 Bacteria 37103
163 Ga0495585_0004957 3300046492 Bacteria 8513
164 Ga0495596_0000087 3300046500 Bacteria 64252
165 Ga0495607_0000197 3300046501 Bacteria 63955
166 Ga0495607_0000519 3300046501 Bacteria 37970
167 Ga0495607_0005919 3300046501 Bacteria 8675
168 Ga0495607_0008672 3300046501 Bacteria 6931
169 Ga0495607_0014058 3300046501 Bacteria 5225
170 Ga0495607_0025648 3300046501 Bacteria 3664
171 Ga0495607_0026819 3300046501 Bacteria 3570
172 Ga0495607_0038372 3300046501 Bacteria 2869
173 Ga0495607_0076716 3300046501 Bacteria 1847
174 Ga0495583_0000538 3300046506 Bacteria 53381
175 Ga0495583_0001123 3300046506 Bacteria 29446
176 Ga0495583_0008230 3300046506 Bacteria 6397
177 Ga0495606_0001011 3300046507 Bacteria 40888
178 Ga0495606_0001473 3300046507 Bacteria 31418
179 Ga0495606_0002005 3300046507 Bacteria 25040
180 Ga0495606_0011792 3300046507 Bacteria 7083
181 Ga0495606_0038492 3300046507 Bacteria 3234
182 Ga0495606_0074556 3300046507 Bacteria 2125
183 Ga0495610_0006343 3300046512 Bacteria 8173
184 Ga0495610_0010362 3300046512 Bacteria 5801
185 Ga0495610_0014438 3300046512 Bacteria 4637
186 Ga0495616_0002490 3300046513 Bacteria 12186
187 Ga0495616_0008495 3300046513 Bacteria 6076
188 Ga0495616_0014949 3300046513 Bacteria 4329
189 Ga0495616_0027190 3300046513 Bacteria 3038
190 Ga0495620_0000095 3300046515 Bacteria 70152
191 Ga0495620_0000175 3300046515 Bacteria 50155
192 Ga0495620_0001997 3300046515 Bacteria 11924
193 Ga0495620_0002826 3300046515 Bacteria 9977
194 Ga0495620_0008862 3300046515 Bacteria 5381
195 Ga0495630_0008871 3300046517 Bacteria 7220
196 Ga0495631_0000009 3300046518 Bacteria 121117
197 Ga0495631_0000151 3300046518 Bacteria 47384
198 Ga0495631_0001808 3300046518 Bacteria 12647
199 Ga0495631_0002355 3300046518 Bacteria 10749
200 Ga0495631_0002946 3300046518 Bacteria 9430
201 Ga0495631_0007123 3300046518 Bacteria 5714
202 Ga0495632_0000261 3300046519 Bacteria 52560
203 Ga0495632_0000295 3300046519 Bacteria 48203
204 Ga0495632_0001145 3300046519 Bacteria 22647
205 Ga0495632_0001153 3300046519 Bacteria 22526
206 Ga0495632_0001397 3300046519 Bacteria 20236
207 Ga0495632_0003884 3300046519 Bacteria 10384
208 Ga0495632_0021748 3300046519 Bacteria 3450
209 Ga0495632_0030839 3300046519 Bacteria 2778
210 Ga0495632_0048312 3300046519 Bacteria 2107
211 Ga0495632_0088434 3300046519 Bacteria 1471
212 Ga0495637_0000363 3300046520 Bacteria 34565
213 Ga0495637_0000401 3300046520 Bacteria 32143
214 Ga0495637_0007641 3300046520 Bacteria 5348
215 Ga0495637_0008827 3300046520 Bacteria 4935
216 Ga0495637_0015434 3300046520 Bacteria 3581
217 Ga0495637_0024889 3300046520 Bacteria 2705
218 Ga0495643_0000642 3300046522 Bacteria 41391
219 Ga0495643_0001118 3300046522 Bacteria 26543
220 Ga0495643_0002842 3300046522 Bacteria 13179
221 Ga0495643_0009390 3300046522 Bacteria 6082
222 Ga0495643_0009845 3300046522 Bacteria 5912
223 Ga0495643_0011071 3300046522 Bacteria 5512
224 Ga0495643_0012650 3300046522 Bacteria 5082
225 Ga0495644_0000005 3300046523 Bacteria 135313
226 Ga0495644_0000221 3300046523 Bacteria 26846
227 Ga0495644_0000504 3300046523 Bacteria 16685
228 Ga0495648_0000590 3300046524 Bacteria 38832
229 Ga0495648_0001938 3300046524 Bacteria 19712
230 Ga0495666_0000133 3300046526 Bacteria 31240
231 Ga0495642_0000442 3300046528 Bacteria 21875
232 Ga0495654_0001775 3300046530 Bacteria 14409
233 Ga0495654_0001853 3300046530 Bacteria 14074
234 Ga0495654_0002056 3300046530 Bacteria 13206
235 Ga0495654_0005437 3300046530 Bacteria 7398
236 Ga0495654_0011999 3300046530 Bacteria 4668
237 Ga0495654_0018195 3300046530 Bacteria 3685
238 Ga0495609_0000160 3300046538 Bacteria 69846
239 Ga0495609_0000228 3300046538 Bacteria 53846
240 Ga0495609_0000720 3300046538 Bacteria 25213
241 Ga0495597_0000205 3300046542 Bacteria 54352
242 Ga0495597_0006702 3300046542 Bacteria 5928
243 Ga0495597_0010860 3300046542 Bacteria 4433
244 Ga0495597_0015902 3300046542 Bacteria 3557
245 Ga0495597_0028293 3300046542 Bacteria 2566
246 Ga0495597_0047519 3300046542 Bacteria 1899
247 Ga0495597_0056933 3300046542 Bacteria 1711
248 Ga0495633_0032261 3300046558 Bacteria 2532
249 Ga0495656_0104544 3300046615 Bacteria 1315
250 Ga0495668_0001686 3300046616 Bacteria 20450
251 Ga0495668_0005676 3300046616 Bacteria 8361
252 Ga0495668_0018177 3300046616 Bacteria 4066
253 Ga0495668_0120443 3300046616 Bacteria 1435
254 Ga0495611_0004449 3300046648 Bacteria 6066
255 Ga0495611_0010883 3300046648 Bacteria 3853
256 Ga0495611_0012819 3300046648 Bacteria 3562
257 Ga0495625_0002208 3300046660 Bacteria 21531
258 Ga0495625_0003445 3300046660 Bacteria 15779
259 Ga0495625_0005523 3300046660 Bacteria 11493
260 Ga0495625_0052883 3300046660 Bacteria 2906
261 Ga0495625_0053302 3300046660 Bacteria 2893
262 Ga0495659_0029555 3300046664 Bacteria 1903
263 Ga0495661_0000036 3300046665 Bacteria 164694
264 Ga0495661_0005598 3300046665 Bacteria 8913
265 Ga0495661_0011761 3300046665 Bacteria 5928
266 Ga0495661_0018246 3300046665 Bacteria 4618
267 Ga0495661_0028584 3300046665 Bacteria 3566
268 Ga0495661_0037267 3300046665 Bacteria 3037
269 Ga0495661_0109616 3300046665 Bacteria 1540
270 Ga0495670_0012734 3300046691 Bacteria 4136
271 Ga0495670_0014813 3300046691 Bacteria 3838
272 Ga0495670_0016149 3300046691 Bacteria 3671
273 Ga0495671_0001921 3300046692 Bacteria 13344
274 Ga0495671_0004481 3300046692 Bacteria 8344
275 Ga0495671_0009333 3300046692 Bacteria 5480
276 Ga0495649_0000060 3300046694 Bacteria 97624
277 Ga0495649_0000086 3300046694 Bacteria 80528
278 Ga0495649_0000495 3300046694 Bacteria 33735
279 Ga0495649_0000752 3300046694 Bacteria 26113
280 Ga0495649_0004844 3300046694 Bacteria 8704
281 Ga0495649_0006381 3300046694 Bacteria 7339
282 Ga0495649_0019153 3300046694 Bacteria 3846
283 Ga0495649_0022774 3300046694 Bacteria 3503
284 Ga0495649_0024018 3300046694 Bacteria 3402
285 Ga0495589_0000239 3300046794 Bacteria 45943
286 Ga0495589_0000460 3300046794 Bacteria 29846
287 Ga0495589_0001694 3300046794 Bacteria 12587
288 Ga0495589_0010310 3300046794 Bacteria 4853
289 Ga0495660_0005289 3300046810 Bacteria 7734
290 Ga0495660_0005815 3300046810 Bacteria 7363
291 Ga0495660_0009737 3300046810 Bacteria 5599
292 Ga0495660_0010593 3300046810 Bacteria 5364
293 Ga0495660_0031179 3300046810 Bacteria 2999
294 Ga0495660_0095518 3300046810 Bacteria 1537
295 Ga0495660_0099977 3300046810 Bacteria 1494
296 Ga0495660_0137272 3300046810 Bacteria 1220
297 Ga0495636_0000954 3300047318 Bacteria 10768
298 Ga0495672_0000687 3300047320 Bacteria 37704
299 Ga0495672_0002395 3300047320 Bacteria 17322
300 Ga0495672_0003245 3300047320 Bacteria 14115
301 Ga0495672_0005068 3300047320 Bacteria 10528
302 Ga0495672_0005986 3300047320 Bacteria 9524
303 Ga0495672_0010176 3300047320 Bacteria 6723
304 Ga0495672_0010778 3300047320 Bacteria 6487
305 Ga0495672_0013363 3300047320 Bacteria 5669
306 Ga0495672_0021180 3300047320 Bacteria 4244
307 Ga0495683_0000028 3300047323 Bacteria 153672
308 Ga0495683_0002531 3300047323 Bacteria 10976
309 Ga0495683_0006052 3300047323 Bacteria 6639
310 Ga0495683_0008238 3300047323 Bacteria 5587
311 Ga0495683_0024948 3300047323 Bacteria 3065
312 Ga0495687_003253 3300047443 Bacteria 11982
313 Ga0495677_0001252 3300047445 Bacteria 10169
314 Ga0495679_004830 3300047446 Bacteria 6092
315 Ga0495685_030025 3300047447 Bacteria 1869
316 Ga0495673_0000224 3300047469 Bacteria 83846
317 Ga0495673_0000314 3300047469 Bacteria 63531
318 Ga0495673_0001695 3300047469 Bacteria 16894
319 Ga0495673_0001852 3300047469 Bacteria 15883
320 Ga0495673_0002177 3300047469 Bacteria 14226
321 Ga0495673_0003576 3300047469 Bacteria 10196
322 Ga0495673_0005441 3300047469 Bacteria 7697
323 Ga0495673_0018610 3300047469 Bacteria 3497
324 Ga0495673_0021305 3300047469 Bacteria 3204
325 Ga0495673_0061282 3300047469 Bacteria 1611
326 Ga0495681_0000234 3300047470 Bacteria 45933
327 Ga0495681_0005811 3300047470 Bacteria 8197
328 Ga0495681_0024214 3300047470 Bacteria 3204
329 Ga0495681_0032499 3300047470 Bacteria 2626
330 Ga0495681_0055174 3300047470 Bacteria 1854
331 Ga0495681_0113473 3300047470 Bacteria 1170
332 Ga0495686_0000636 3300047472 Bacteria 48321
333 Ga0495686_0025799 3300047472 Bacteria 3849
334 Ga0495686_0038885 3300047472 Bacteria 3041
335 Ga0495686_0065281 3300047472 Bacteria 2250
336 Ga0495686_0073779 3300047472 Bacteria 2095
337 Ga0495626_0000057 3300048091 Bacteria 148288
338 Ga0495626_0000065 3300048091 Bacteria 141689
339 Ga0495626_0000083 3300048091 Bacteria 127169
340 Ga0495626_0003470 3300048091 Bacteria 10104
341 Ga0496102_0000183 3300048905 Bacteria 84751
342 Ga0496103_0000233 3300048906 Bacteria 54524
343 Ga0496110_0018534 3300048913 Bacteria 5837
344 Ga0496110_0101008 3300048913 Bacteria 2586
345 Ga0496111_0158122 3300048914 Bacteria 1682
346 Ga0496114_0004824 3300048917 Bacteria 10504
347 Ga0496116_0001257 3300048919 Bacteria 29398
348 Ga0496116_0001983 3300048919 Bacteria 22047
349 Ga0496117_0000640 3300048920 Bacteria 56336
350 Ga0496117_0018816 3300048920 Bacteria 5701
351 Ga0496118_0003805 3300048921 Bacteria 18595
352 Ga0496118_0005613 3300048921 Bacteria 14167
353 Ga0496121_0073689 3300048924 Bacteria 2735
354 Ga0496122_0005353 3300048925 Bacteria 15333
355 Ga0496122_0032408 3300048925 Bacteria 4322
356 Ga0496123_0000642 3300048926 Bacteria 58229
357 Ga0496123_0002555 3300048926 Bacteria 22171
358 Ga0496124_0000276 3300048927 Bacteria 98406
359 Ga0496124_0004370 3300048927 Bacteria 16535
360 Ga0496124_0004683 3300048927 Bacteria 15812
361 Ga0496124_0005631 3300048927 Bacteria 14007
362 Ga0496124_0011357 3300048927 Bacteria 8905
363 Ga0496124_0056245 3300048927 Bacteria 3319
364 Ga0496124_0311720 3300048927 Bacteria 1131
365 Ga0496125_0019830 3300048928 Bacteria 6326
366 Ga0496125_0021019 3300048928 Bacteria 6102
367 Ga0496126_0006306 3300048929 Bacteria 13245
368 Ga0495678_001085 3300049459 Bacteria 22975
369 Ga0495678_001121 3300049459 Bacteria 22234
370 Ga0495678_001152 3300049459 Bacteria 21898
371 Ga0495678_002144 3300049459 Bacteria 13939
372 Ga0495678_003196 3300049459 Bacteria 10315
373 Ga0495678_003767 3300049459 Bacteria 9157
374 Ga0495678_004627 3300049459 Bacteria 7895
375 Ga0495678_005705 3300049459 Bacteria 6771
376 Ga0495678_019288 3300049459 Bacteria 3046
377 Ga0495678_040728 3300049459 Bacteria 1864
378 Ga0495682_0000483 3300049460 Bacteria 27500
379 Ga0495682_0043988 3300049460 Bacteria 1635
380 Ga0501034_0000185 3300049571 Bacteria 116886
381 Ga0501222_000656 3300049662 Bacteria 5059
382 nmdc:mga03683_4674_c1 3300050489 Bacteria 3612
383 nmdc:mga00v17_3771_c1 3300050491 Bacteria 7826
384 nmdc:mga00v17_59288_c1 3300050491 Bacteria 2348
385 nmdc:mga08x19_19367_c1 3300050514 Bacteria 4175
386 Ga0500618_004139 3300053125 Bacteria 4741
387 Ga0500659_0000019 3300053135 Bacteria 65589
388 Ga0500659_0003065 3300053135 Bacteria 9941
389 Ga0500577_0109489 3300053142 Bacteria 1138

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300006944 Ga0099823_1051314 Ga0099823_10513142 241
2 3300046694 Ga0495649_0004844 Ga0495649_0004844_7637_8557 282
3 3300046455 Ga0495603_0031794 Ga0495603_0031794_859_1779 283
4 3300053125 Ga0500618_004139 Ga0500618_004139_3686_4606 283
5 3300046616 Ga0495668_0120443 Ga0495668_0120443_10_882 290
6 3300046463 Ga0495653_0000344 Ga0495653_0000344_11580_12500 291
7 3300046492 Ga0495585_0004957 Ga0495585_0004957_5610_6530 291
8 3300046665 Ga0495661_0000036 Ga0495661_0000036_13103_14023 291
9 3300005564 Ga0070664_100049853 Ga0070664_1000498535 297
10 3300005616 Ga0068852_100578836 Ga0068852_1005788361 297
11 3300026142 Ga0207698_10440678 Ga0207698_104406782 297
12 3300044694 Ga0466963_0160521 Ga0466963_0160521_30_935 297
13 3300047443 Ga0495687_003253 Ga0495687_003253_3528_4433 301
14 3300046492 Ga0495585_0000490 Ga0495585_0000490_6975_7934 302
15 3300046518 Ga0495631_0000009 Ga0495631_0000009_6986_7945 302
16 3300013102 Ga0157371_10000039 Ga0157371_100000393 303
17 iso_pu_bacteria 2765235841 2765584056 303
18 3300046520 Ga0495637_0024889 Ga0495637_0024889_1692_2606 304
19 iso_pu_bacteria 3007803356 3007805136 304
20 iso_pu_bacteria 8052494512 8052497180 304
21 3300046519 Ga0495632_0001153 Ga0495632_0001153_10770_11687 305
22 3300025735 Ga0207713_1020820 Ga0207713_10208203 306
23 3300046501 Ga0495607_0014058 Ga0495607_0014058_2629_3549 306
24 3300046507 Ga0495606_0002005 Ga0495606_0002005_1818_2738 306
25 3300047323 Ga0495683_0000028 Ga0495683_0000028_403_1323 306
26 3300049459 Ga0495678_040728 Ga0495678_040728_870_1790 306
27 iso_pu_bacteria 2599185302 2599944406 306
28 iso_pu_bacteria 2599185304 2599954878 306
29 iso_pu_bacteria 2599185309 2599984193 306
30 iso_pu_bacteria 2599185310 2599988858 306
31 iso_pu_bacteria 2599185312 2600001238 306
32 iso_pu_bacteria 2599185320 2600049008 306
33 3300025711 Ga0207696_1000011 Ga0207696_1000011392 307
34 3300048927 Ga0496124_0004683 Ga0496124_0004683_13164_14087 307
35 3300048928 Ga0496125_0021019 Ga0496125_0021019_2638_3561 307
36 iso_pu_bacteria 2511231014 2511311533 307
37 iso_pu_bacteria 2511231015 2511318214 307
38 iso_pu_bacteria 2511231020 2511348278 307
39 iso_pu_bacteria 2511231022 2511366322 307
40 iso_pu_bacteria 2738543015 2739258080 307
41 3300006944 Ga0099823_1000032 Ga0099823_100003262 308
42 3300009011 Ga0105251_10001539 Ga0105251_1000153912 308
43 3300009036 Ga0105244_10057690 Ga0105244_100576902 308
44 3300013102 Ga0157371_10003429 Ga0157371_100034292 308
45 3300025711 Ga0207696_1023600 Ga0207696_10236002 308
46 3300025728 Ga0207655_1000148 Ga0207655_100014846 308
47 3300025735 Ga0207713_1016567 Ga0207713_10165673 308
48 3300025735 Ga0207713_1019323 Ga0207713_10193234 308
49 3300027296 Ga0209389_1000122 Ga0209389_100012258 308
50 3300042006 Ga0439432_045598 Ga0439432_045598_354_1328 308
51 3300042142 Ga0450905_000178 Ga0450905_000178_5724_6698 308
52 3300046460 Ga0495638_0016025 Ga0495638_0016025_272_1198 308
53 3300046474 Ga0495605_0001451 Ga0495605_0001451_4702_5628 308
54 3300046522 Ga0495643_0001118 Ga0495643_0001118_22033_22959 308
55 3300046524 Ga0495648_0001938 Ga0495648_0001938_8195_9121 308
56 3300046530 Ga0495654_0001775 Ga0495654_0001775_8782_9708 308
57 3300047320 Ga0495672_0003245 Ga0495672_0003245_4510_5436 308
58 3300047470 Ga0495681_0032499 Ga0495681_0032499_1235_2185 308
59 3300048917 Ga0496114_0004824 Ga0496114_0004824_6741_7667 308
60 3300048920 Ga0496117_0018816 Ga0496117_0018816_1354_2280 308
61 3300048921 Ga0496118_0005613 Ga0496118_0005613_9299_10225 308
62 3300048925 Ga0496122_0005353 Ga0496122_0005353_8655_9581 308
63 3300048925 Ga0496122_0032408 Ga0496122_0032408_792_1718 308
64 3300048926 Ga0496123_0000642 Ga0496123_0000642_2181_3107 308
65 3300048927 Ga0496124_0011357 Ga0496124_0011357_6706_7632 308
66 3300048927 Ga0496124_0311720 Ga0496124_0311720_34_960 308
67 3300048928 Ga0496125_0019830 Ga0496125_0019830_227_1153 308
68 3300049571 Ga0501034_0000185 Ga0501034_0000185_14678_15652 308
69 3300053135 Ga0500659_0000019 Ga0500659_0000019_48218_49144 308
70 3300053135 Ga0500659_0003065 Ga0500659_0003065_6779_7753 308
71 iso_pu_bacteria 2808606361 2808856353 308
72 iso_pu_bacteria 2808606376 2808924627 308
73 iso_pu_bacteria 2808606378 2808936901 308
74 iso_pu_bacteria 2808606380 2808946791 308
75 iso_pu_bacteria 2808606383 2808964679 308
76 iso_pu_bacteria 2808606389 2809000451 308
77 iso_pu_bacteria 2988728565 2988729248 308
78 iso_pu_bacteria 8052494512 8052496256 308
79 3300046452 Ga0495617_005798 Ga0495617_005798_493_1422 309
80 3300046471 Ga0495650_0033442 Ga0495650_0033442_848_1777 309
81 3300046518 Ga0495631_0000151 Ga0495631_0000151_26978_27907 309
82 3300046519 Ga0495632_0088434 Ga0495632_0088434_116_1045 309
83 3300046530 Ga0495654_0011999 Ga0495654_0011999_419_1348 309
84 3300047320 Ga0495672_0005986 Ga0495672_0005986_557_1486 309
85 3300048927 Ga0496124_0004370 Ga0496124_0004370_5454_6383 309
86 iso_pu_bacteria 2511231156 2511825805 309
87 iso_pu_bacteria 2599185300 2599932304 309
88 iso_pu_bacteria 2599185311 2599992436 309
89 iso_pu_bacteria 2599185319 2600044427 309
90 iso_pu_bacteria 2599185323 2600067973 309
91 iso_pu_bacteria 2643221650 2644283997 309
92 iso_pu_bacteria 2675903515 2678263705 309
93 iso_pu_bacteria 2744054620 2745010036 309
94 iso_pu_bacteria 2791355520 2794597173 309
95 iso_pu_bacteria 2842854478 2842858082 309
96 iso_pu_bacteria 2919481497 2919485491 309
97 iso_pu_bacteria 2929144301 2929147164 309
98 iso_pu_bacteria 8056143049 8056146272 309
99 3300009036 Ga0105244_10001705 Ga0105244_1000170510 310
100 3300025728 Ga0207655_1000345 Ga0207655_10003458 310
101 3300046457 Ga0495590_0000608 Ga0495590_0000608_11862_12794 310
102 3300046458 Ga0495591_004919 Ga0495591_004919_1045_1977 310
103 3300046460 Ga0495638_0000088 Ga0495638_0000088_69086_70018 310
104 3300046513 Ga0495616_0002490 Ga0495616_0002490_8666_9598 310
105 3300046523 Ga0495644_0000005 Ga0495644_0000005_46529_47461 310
106 3300046542 Ga0495597_0006702 Ga0495597_0006702_2083_3015 310
107 3300046694 Ga0495649_0000060 Ga0495649_0000060_40266_41198 310
108 3300046810 Ga0495660_0009737 Ga0495660_0009737_994_1926 310
109 3300047320 Ga0495672_0000687 Ga0495672_0000687_6754_7686 310
110 3300047323 Ga0495683_0002531 Ga0495683_0002531_7147_8079 310
111 3300048913 Ga0496110_0018534 Ga0496110_0018534_4737_5669 310
112 3300048924 Ga0496121_0073689 Ga0496121_0073689_606_1580 310
113 3300048927 Ga0496124_0000276 Ga0496124_0000276_79290_80222 310
114 3300049459 Ga0495678_019288 Ga0495678_019288_1062_1994 310
115 3300006051 Ga0075364_10005632 Ga0075364_100056326 311
116 3300006051 Ga0075364_10093421 Ga0075364_100934213 311
117 3300006058 Ga0075432_10007881 Ga0075432_100078813 311
118 3300006058 Ga0075432_10010404 Ga0075432_100104041 311
119 3300006177 Ga0075362_10004382 Ga0075362_100043826 311
120 3300006914 Ga0075436_100109369 Ga0075436_1001093693 311
121 3300009036 Ga0105244_10006023 Ga0105244_100060237 311
122 3300013100 Ga0157373_10041082 Ga0157373_100410822 311
123 3300013306 Ga0163162_10020857 Ga0163162_100208572 311
124 3300013308 Ga0157375_10068989 Ga0157375_100689892 311
125 3300014497 Ga0182008_10002470 Ga0182008_100024707 311
126 3300025728 Ga0207655_1032335 Ga0207655_10323351 311
127 3300027907 Ga0207428_10009833 Ga0207428_100098333 311
128 3300027907 Ga0207428_10029491 Ga0207428_100294914 311
129 3300027907 Ga0207428_10069116 Ga0207428_100691163 311
130 3300042993 Ga0439440_0005870 Ga0439440_0005870_1473_2408 311
131 3300046452 Ga0495617_007810 Ga0495617_007810_1013_1948 311
132 3300046457 Ga0495590_0010928 Ga0495590_0010928_1792_2727 311
133 3300046458 Ga0495591_022276 Ga0495591_022276_130_1065 311
134 3300046460 Ga0495638_0001095 Ga0495638_0001095_17708_18643 311
135 3300046460 Ga0495638_0021296 Ga0495638_0021296_366_1301 311
136 3300046471 Ga0495650_0000902 Ga0495650_0000902_12857_13792 311
137 3300046474 Ga0495605_0001159 Ga0495605_0001159_9518_10453 311
138 3300046474 Ga0495605_0110560 Ga0495605_0110560_197_1132 311
139 3300046491 Ga0495584_0001096 Ga0495584_0001096_2636_3571 311
140 3300046501 Ga0495607_0005919 Ga0495607_0005919_3345_4280 311
141 3300046501 Ga0495607_0025648 Ga0495607_0025648_98_1033 311
142 3300046506 Ga0495583_0000538 Ga0495583_0000538_24708_25643 311
143 3300046515 Ga0495620_0008862 Ga0495620_0008862_867_1802 311
144 3300046519 Ga0495632_0000261 Ga0495632_0000261_45118_46053 311
145 3300046519 Ga0495632_0000295 Ga0495632_0000295_23927_24862 311
146 3300046522 Ga0495643_0000642 Ga0495643_0000642_21685_22620 311
147 3300046522 Ga0495643_0002842 Ga0495643_0002842_2727_3662 311
148 3300046522 Ga0495643_0009845 Ga0495643_0009845_2794_3729 311
149 3300046523 Ga0495644_0000504 Ga0495644_0000504_7603_8538 311
150 3300046528 Ga0495642_0000442 Ga0495642_0000442_13251_14186 311
151 3300046538 Ga0495609_0000228 Ga0495609_0000228_39964_40899 311
152 3300046538 Ga0495609_0000720 Ga0495609_0000720_18011_18946 311
153 3300046616 Ga0495668_0018177 Ga0495668_0018177_2852_3787 311
154 3300046648 Ga0495611_0012819 Ga0495611_0012819_1304_2239 311
155 3300046660 Ga0495625_0053302 Ga0495625_0053302_1052_1987 311
156 3300046664 Ga0495659_0029555 Ga0495659_0029555_124_1059 311
157 3300046665 Ga0495661_0028584 Ga0495661_0028584_1049_1984 311
158 3300046692 Ga0495671_0004481 Ga0495671_0004481_3270_4205 311
159 3300046694 Ga0495649_0000086 Ga0495649_0000086_70740_71675 311
160 3300046794 Ga0495589_0000460 Ga0495589_0000460_14332_15267 311
161 3300046794 Ga0495589_0010310 Ga0495589_0010310_3078_4013 311
162 3300046810 Ga0495660_0005289 Ga0495660_0005289_3259_4194 311
163 3300046810 Ga0495660_0137272 Ga0495660_0137272_51_986 311
164 3300047318 Ga0495636_0000954 Ga0495636_0000954_6508_7443 311
165 3300047320 Ga0495672_0002395 Ga0495672_0002395_2975_3910 311
166 3300047320 Ga0495672_0010778 Ga0495672_0010778_2810_3745 311
167 3300047320 Ga0495672_0021180 Ga0495672_0021180_2934_3869 311
168 3300047323 Ga0495683_0008238 Ga0495683_0008238_3812_4747 311
169 3300047445 Ga0495677_0001252 Ga0495677_0001252_7849_8784 311
170 3300047446 Ga0495679_004830 Ga0495679_004830_1790_2725 311
171 3300047447 Ga0495685_030025 Ga0495685_030025_383_1318 311
172 3300047469 Ga0495673_0000314 Ga0495673_0000314_61344_62279 311
173 3300047469 Ga0495673_0018610 Ga0495673_0018610_907_1842 311
174 3300047469 Ga0495673_0061282 Ga0495673_0061282_264_1199 311
175 3300047470 Ga0495681_0055174 Ga0495681_0055174_540_1475 311
176 3300048091 Ga0495626_0000083 Ga0495626_0000083_67474_68409 311
177 3300048091 Ga0495626_0003470 Ga0495626_0003470_2342_3277 311
178 3300049459 Ga0495678_002144 Ga0495678_002144_4151_5086 311
179 3300049459 Ga0495678_005705 Ga0495678_005705_1862_2797 311
180 3300050489 nmdc:mga03683_4674_c1 nmdc:mga03683_4674_c1_2329_3264 311
181 3300050491 nmdc:mga00v17_3771_c1 nmdc:mga00v17_3771_c1_453_1388 311
182 3300050491 nmdc:mga00v17_59288_c1 nmdc:mga00v17_59288_c1_68_1003 311
183 3300050514 nmdc:mga08x19_19367_c1 nmdc:mga08x19_19367_c1_782_1717 311
184 3300009011 Ga0105251_10001292 Ga0105251_1000129210 312
185 3300009011 Ga0105251_10010457 Ga0105251_100104574 312
186 3300013100 Ga0157373_10016072 Ga0157373_100160725 312
187 3300025735 Ga0207713_1000243 Ga0207713_100024362 312
188 3300042009 Ga0439451_000086 Ga0439451_000086_6454_7392 312
189 3300042016 Ga0439463_008417 Ga0439463_008417_1141_2079 312
190 3300042016 Ga0439463_027633 Ga0439463_027633_149_1087 312
191 3300046457 Ga0495590_0050536 Ga0495590_0050536_481_1419 312
192 3300046458 Ga0495591_000504 Ga0495591_000504_8947_9885 312
193 3300046458 Ga0495591_003386 Ga0495591_003386_1165_2103 312
194 3300046471 Ga0495650_0001581 Ga0495650_0001581_14337_15275 312
195 3300046474 Ga0495605_0000067 Ga0495605_0000067_19779_20717 312
196 3300046474 Ga0495605_0000145 Ga0495605_0000145_47910_48848 312
197 3300046474 Ga0495605_0001374 Ga0495605_0001374_3069_4013 312
198 3300046491 Ga0495584_0000063 Ga0495584_0000063_11478_12443 312
199 3300046501 Ga0495607_0000197 Ga0495607_0000197_12118_13056 312
200 3300046501 Ga0495607_0076716 Ga0495607_0076716_201_1139 312
201 3300046506 Ga0495583_0001123 Ga0495583_0001123_10436_11374 312
202 3300046506 Ga0495583_0008230 Ga0495583_0008230_1692_2630 312
203 3300046512 Ga0495610_0006343 Ga0495610_0006343_3309_4247 312
204 3300046515 Ga0495620_0000175 Ga0495620_0000175_13452_14390 312
205 3300046515 Ga0495620_0002826 Ga0495620_0002826_7682_8623 312
206 3300046518 Ga0495631_0007123 Ga0495631_0007123_1110_2048 312
207 3300046520 Ga0495637_0007641 Ga0495637_0007641_2974_3915 312
208 3300046522 Ga0495643_0009390 Ga0495643_0009390_3760_4698 312
209 3300046524 Ga0495648_0000590 Ga0495648_0000590_8728_9666 312
210 3300046530 Ga0495654_0005437 Ga0495654_0005437_4240_5178 312
211 3300046648 Ga0495611_0010883 Ga0495611_0010883_2399_3337 312
212 3300046665 Ga0495661_0005598 Ga0495661_0005598_7049_7987 312
213 3300046665 Ga0495661_0011761 Ga0495661_0011761_4024_4962 312
214 3300046691 Ga0495670_0014813 Ga0495670_0014813_2143_3087 312
215 3300046691 Ga0495670_0016149 Ga0495670_0016149_2718_3656 312
216 3300046692 Ga0495671_0001921 Ga0495671_0001921_4025_4963 312
217 3300046810 Ga0495660_0095518 Ga0495660_0095518_390_1367 312
218 3300047320 Ga0495672_0013363 Ga0495672_0013363_1002_1940 312
219 3300047469 Ga0495673_0000224 Ga0495673_0000224_33612_34553 312
220 3300047469 Ga0495673_0002177 Ga0495673_0002177_3351_4289 312
221 3300047469 Ga0495673_0005441 Ga0495673_0005441_2444_3382 312
222 3300047469 Ga0495673_0021305 Ga0495673_0021305_1684_2661 312
223 3300047472 Ga0495686_0025799 Ga0495686_0025799_1009_1947 312
224 3300048919 Ga0496116_0001983 Ga0496116_0001983_4257_5264 312
225 3300048926 Ga0496123_0002555 Ga0496123_0002555_4463_5470 312
226 3300048927 Ga0496124_0056245 Ga0496124_0056245_254_1261 312
227 3300049459 Ga0495678_001085 Ga0495678_001085_21440_22417 312
228 3300049459 Ga0495678_003196 Ga0495678_003196_9310_10248 312
229 3300049460 Ga0495682_0000483 Ga0495682_0000483_11026_11964 312
230 3300053142 Ga0500577_0109489 Ga0500577_0109489_106_1044 312
231 iso_pu_bacteria 2511231016 2511327198 312
232 3300031548 Ga0307408_100000085 Ga0307408_10000008546 313
233 3300031548 Ga0307408_100002973 Ga0307408_1000029737 313
234 3300031548 Ga0307408_100015618 Ga0307408_1000156181 313
235 3300031731 Ga0307405_10000375 Ga0307405_1000037513 313
236 3300031731 Ga0307405_10027975 Ga0307405_100279752 313
237 3300031731 Ga0307405_10038649 Ga0307405_100386492 313
238 3300031901 Ga0307406_10351137 Ga0307406_103511371 313
239 3300031903 Ga0307407_10008788 Ga0307407_100087882 313
240 3300031911 Ga0307412_10001395 Ga0307412_1000139512 313
241 3300031911 Ga0307412_10003870 Ga0307412_100038707 313
242 3300031911 Ga0307412_10011147 Ga0307412_100111474 313
243 3300032002 Ga0307416_100610870 Ga0307416_1006108701 313
244 3300032004 Ga0307414_10035478 Ga0307414_100354783 313
245 3300032004 Ga0307414_10510165 Ga0307414_105101651 313
246 3300032005 Ga0307411_10074257 Ga0307411_100742572 313
247 3300032005 Ga0307411_10146492 Ga0307411_101464921 313
248 3300041405 Ga0439438_000077 Ga0439438_000077_20602_21543 313
249 3300041405 Ga0439438_000205 Ga0439438_000205_18463_19404 313
250 3300042006 Ga0439432_009185 Ga0439432_009185_1010_1951 313
251 3300042006 Ga0439432_009959 Ga0439432_009959_1239_2180 313
252 3300042145 Ga0450906_017340 Ga0450906_017340_137_1078 313
253 3300046474 Ga0495605_0011814 Ga0495605_0011814_991_1932 313
254 3300049662 Ga0501222_000656 Ga0501222_000656_2771_3721 313
255 iso_pu_bacteria 2599185306 2599968918 313
256 iso_pu_bacteria 2599185308 2599980438 313
257 iso_pu_bacteria 2599185313 2600004089 313
258 iso_pu_bacteria 2599185314 2600014249 313
259 iso_pu_bacteria 2599185316 2600023274 313
260 iso_pu_bacteria 2599185325 2600077022 313
261 iso_pu_bacteria 2599185212 2599611168 315
262 iso_pu_bacteria 2599185316 2600023444 315
263 iso_pu_bacteria 2599185317 2600029215 315
264 iso_pu_bacteria 2599185322 2600057111 315
265 iso_pu_bacteria 2599185325 2600077399 315
266 iso_pu_bacteria 2600254930 2600358589 315
267 iso_pu_bacteria 2667528176 2671124686 315
268 iso_pu_bacteria 2808606377 2808927952 316
269 iso_pu_bacteria 2808606381 2808949508 316
270 iso_pu_bacteria 2919501602 2919501613 316
271 iso_pu_bacteria 2926063275 2926063286 316
272 3300028379 Ga0268266_10392310 Ga0268266_103923101 319
273 3300032004 Ga0307414_10013158 Ga0307414_100131584 319
274 3300005288 Ga0065714_10002443 Ga0065714_1000244315 320
275 3300005288 Ga0065714_10081103 Ga0065714_100811032 320
276 3300005548 Ga0070665_100230990 Ga0070665_1002309902 320
277 3300013102 Ga0157371_10000084 Ga0157371_10000084126 320
278 3300013104 Ga0157370_10001470 Ga0157370_100014708 320
279 3300014497 Ga0182008_10001402 Ga0182008_1000140210 320
280 3300014497 Ga0182008_10096383 Ga0182008_100963831 320
281 3300015261 Ga0182006_1030359 Ga0182006_10303592 320
282 3300015261 Ga0182006_1045027 Ga0182006_10450272 320
283 3300041407 Ga0439447_000287 Ga0439447_000287_5393_6355 320
284 3300041411 Ga0439466_0000073 Ga0439466_0000073_23164_24126 320
285 3300041411 Ga0439466_0016307 Ga0439466_0016307_558_1520 320
286 3300042009 Ga0439451_000354 Ga0439451_000354_962_1924 320
287 3300042013 Ga0439456_003278 Ga0439456_003278_1019_1981 320
288 3300042016 Ga0439463_001755 Ga0439463_001755_413_1375 320
289 3300042139 Ga0450904_000079 Ga0450904_000079_12713_13675 320
290 3300042142 Ga0450905_001014 Ga0450905_001014_14_976 320
291 3300046453 Ga0495627_037741 Ga0495627_037741_309_1289 320
292 3300046460 Ga0495638_0008344 Ga0495638_0008344_282_1262 320
293 3300046471 Ga0495650_0028862 Ga0495650_0028862_676_1677 320
294 3300046491 Ga0495584_0000438 Ga0495584_0000438_4656_5657 320
295 3300046507 Ga0495606_0001473 Ga0495606_0001473_18637_19638 320
296 3300046513 Ga0495616_0014949 Ga0495616_0014949_3180_4181 320
297 3300046515 Ga0495620_0000095 Ga0495620_0000095_16560_17561 320
298 3300046517 Ga0495630_0008871 Ga0495630_0008871_4809_5771 320
299 3300046518 Ga0495631_0002355 Ga0495631_0002355_4627_5628 320
300 3300046519 Ga0495632_0001145 Ga0495632_0001145_3028_4029 320
301 3300046520 Ga0495637_0000363 Ga0495637_0000363_18374_19375 320
302 3300046526 Ga0495666_0000133 Ga0495666_0000133_16484_17446 320
303 3300046538 Ga0495609_0000160 Ga0495609_0000160_16264_17265 320
304 3300046616 Ga0495668_0005676 Ga0495668_0005676_1942_2943 320
305 3300046660 Ga0495625_0002208 Ga0495625_0002208_18425_19426 320
306 3300046660 Ga0495625_0003445 Ga0495625_0003445_14575_15555 320
307 3300046694 Ga0495649_0000495 Ga0495649_0000495_14335_15336 320
308 3300046794 Ga0495589_0000239 Ga0495589_0000239_29712_30713 320
309 3300047470 Ga0495681_0000234 Ga0495681_0000234_29709_30710 320
310 3300048905 Ga0496102_0000183 Ga0496102_0000183_33387_34349 320
311 3300048906 Ga0496103_0000233 Ga0496103_0000233_33360_34322 320
312 3300048913 Ga0496110_0101008 Ga0496110_0101008_856_1818 320
313 3300048919 Ga0496116_0001257 Ga0496116_0001257_17557_18519 320
314 3300048920 Ga0496117_0000640 Ga0496117_0000640_26331_27293 320
315 3300048921 Ga0496118_0003805 Ga0496118_0003805_9917_10879 320
316 3300048929 Ga0496126_0006306 Ga0496126_0006306_8123_9085 320
317 3300049459 Ga0495678_001152 Ga0495678_001152_18329_19330 320
318 iso_pu_bacteria 2878029506 2878032387 320
319 iso_pu_bacteria 2919063839 2919065255 320
320 iso_pu_bacteria 3007861166 3007861712 320
321 3300025735 Ga0207713_1013615 Ga0207713_10136156 324
322 3300046452 Ga0495617_002338 Ga0495617_002338_4853_5827 324
323 3300046453 Ga0495627_010964 Ga0495627_010964_1363_2337 324
324 3300046458 Ga0495591_002870 Ga0495591_002870_1036_2010 324
325 3300046460 Ga0495638_0001557 Ga0495638_0001557_13973_14947 324
326 3300046460 Ga0495638_0027206 Ga0495638_0027206_266_1240 324
327 3300046471 Ga0495650_0007648 Ga0495650_0007648_1862_2836 324
328 3300046474 Ga0495605_0018643 Ga0495605_0018643_2709_3683 324
329 3300046491 Ga0495584_0013533 Ga0495584_0013533_3006_3980 324
330 3300046491 Ga0495584_0018409 Ga0495584_0018409_549_1523 324
331 3300046501 Ga0495607_0008672 Ga0495607_0008672_4669_5643 324
332 3300046501 Ga0495607_0026819 Ga0495607_0026819_1808_2782 324
333 3300046507 Ga0495606_0001011 Ga0495606_0001011_7864_8838 324
334 3300046512 Ga0495610_0010362 Ga0495610_0010362_1331_2305 324
335 3300046513 Ga0495616_0027190 Ga0495616_0027190_1926_2900 324
336 3300046515 Ga0495620_0001997 Ga0495620_0001997_8090_9064 324
337 3300046518 Ga0495631_0002946 Ga0495631_0002946_1221_2195 324
338 3300046519 Ga0495632_0001397 Ga0495632_0001397_8082_9056 324
339 3300046519 Ga0495632_0030839 Ga0495632_0030839_421_1395 324
340 3300046520 Ga0495637_0008827 Ga0495637_0008827_2989_3963 324
341 3300046522 Ga0495643_0012650 Ga0495643_0012650_2908_3882 324
342 3300046523 Ga0495644_0000221 Ga0495644_0000221_14677_15651 324
343 3300046530 Ga0495654_0002056 Ga0495654_0002056_8174_9148 324
344 3300046542 Ga0495597_0010860 Ga0495597_0010860_2267_3241 324
345 3300046542 Ga0495597_0047519 Ga0495597_0047519_572_1546 324
346 3300046558 Ga0495633_0032261 Ga0495633_0032261_800_1774 324
347 3300046615 Ga0495656_0104544 Ga0495656_0104544_65_1039 324
348 3300046648 Ga0495611_0004449 Ga0495611_0004449_3246_4220 324
349 3300046660 Ga0495625_0052883 Ga0495625_0052883_421_1395 324
350 3300046665 Ga0495661_0109616 Ga0495661_0109616_146_1120 324
351 3300046691 Ga0495670_0012734 Ga0495670_0012734_698_1672 324
352 3300046694 Ga0495649_0000752 Ga0495649_0000752_11185_12159 324
353 3300046694 Ga0495649_0022774 Ga0495649_0022774_1404_2378 324
354 3300046810 Ga0495660_0010593 Ga0495660_0010593_3383_4357 324
355 3300046810 Ga0495660_0099977 Ga0495660_0099977_488_1462 324
356 3300047320 Ga0495672_0005068 Ga0495672_0005068_1475_2449 324
357 3300047323 Ga0495683_0024948 Ga0495683_0024948_1808_2782 324
358 3300047469 Ga0495673_0001695 Ga0495673_0001695_8093_9067 324
359 3300047469 Ga0495673_0001852 Ga0495673_0001852_6585_7559 324
360 3300047469 Ga0495673_0003576 Ga0495673_0003576_2111_3085 324
361 3300047470 Ga0495681_0113473 Ga0495681_0113473_38_1012 324
362 3300048091 Ga0495626_0000065 Ga0495626_0000065_89911_90885 324
363 3300048914 Ga0496111_0158122 Ga0496111_0158122_32_1006 324
364 3300048927 Ga0496124_0005631 Ga0496124_0005631_1853_2827 324
365 3300049459 Ga0495678_003767 Ga0495678_003767_1808_2782 324
366 3300049459 Ga0495678_004627 Ga0495678_004627_5160_6134 324
367 3300049460 Ga0495682_0043988 Ga0495682_0043988_465_1439 324
368 3300003781 Ga0055536_1000013 Ga0055536_1000013186 325
369 3300003791 Ga0055530_10001135 Ga0055530_100011357 325
370 3300003792 Ga0055540_1000008 Ga0055540_1000008233 325
371 3300003794 Ga0055531_10000242 Ga0055531_1000024215 325
372 3300005288 Ga0065714_10003703 Ga0065714_100037031 325
373 3300009092 Ga0105250_10014856 Ga0105250_100148562 325
374 3300009092 Ga0105250_10015781 Ga0105250_100157812 325
375 3300014497 Ga0182008_10002046 Ga0182008_1000204611 325
376 3300017792 Ga0163161_10006007 Ga0163161_100060077 325
377 3300025292 Ga0209676_1000002 Ga0209676_10000021339 325
378 3300025298 Ga0209050_1000006 Ga0209050_1000006231 325
379 3300025303 Ga0209051_1000001 Ga0209051_10000011339 325
380 3300025304 Ga0209257_1000029 Ga0209257_1000029231 325
381 3300025711 Ga0207696_1000830 Ga0207696_100083013 325
382 3300025735 Ga0207713_1001144 Ga0207713_100114421 325
383 3300025735 Ga0207713_1001298 Ga0207713_10012983 325
384 3300041405 Ga0439438_017359 Ga0439438_017359_230_1312 325
385 3300041405 Ga0439438_030128 Ga0439438_030128_428_1429 325
386 3300041411 Ga0439466_0006919 Ga0439466_0006919_273_1334 325
387 3300042010 Ga0439452_000239 Ga0439452_000239_31688_32770 325
388 3300042138 Ga0450903_007715 Ga0450903_007715_142_1143 325
389 3300046453 Ga0495627_011104 Ga0495627_011104_713_1714 325
390 3300046458 Ga0495591_000049 Ga0495591_000049_21382_22383 325
391 3300046460 Ga0495638_0000842 Ga0495638_0000842_15079_16080 325
392 3300046460 Ga0495638_0008931 Ga0495638_0008931_2011_3012 325
393 3300046460 Ga0495638_0047110 Ga0495638_0047110_297_1298 325
394 3300046471 Ga0495650_0007625 Ga0495650_0007625_997_1998 325
395 3300046474 Ga0495605_0010146 Ga0495605_0010146_2307_3308 325
396 3300046491 Ga0495584_0001403 Ga0495584_0001403_9666_10667 325
397 3300046492 Ga0495585_0000253 Ga0495585_0000253_16023_17024 325
398 3300046492 Ga0495585_0000498 Ga0495585_0000498_19949_20950 325
399 3300046500 Ga0495596_0000087 Ga0495596_0000087_45636_46637 325
400 3300046501 Ga0495607_0000519 Ga0495607_0000519_32885_33886 325
401 3300046501 Ga0495607_0038372 Ga0495607_0038372_759_1760 325
402 3300046507 Ga0495606_0011792 Ga0495606_0011792_1407_2408 325
403 3300046507 Ga0495606_0074556 Ga0495606_0074556_130_1131 325
404 3300046512 Ga0495610_0014438 Ga0495610_0014438_279_1280 325
405 3300046513 Ga0495616_0008495 Ga0495616_0008495_4094_5095 325
406 3300046518 Ga0495631_0001808 Ga0495631_0001808_10129_11130 325
407 3300046519 Ga0495632_0003884 Ga0495632_0003884_1359_2360 325
408 3300046519 Ga0495632_0021748 Ga0495632_0021748_480_1481 325
409 3300046519 Ga0495632_0048312 Ga0495632_0048312_950_1951 325
410 3300046520 Ga0495637_0000401 Ga0495637_0000401_29374_30375 325
411 3300046522 Ga0495643_0011071 Ga0495643_0011071_3383_4384 325
412 3300046530 Ga0495654_0001853 Ga0495654_0001853_1440_2441 325
413 3300046542 Ga0495597_0000205 Ga0495597_0000205_32962_33963 325
414 3300046542 Ga0495597_0028293 Ga0495597_0028293_159_1160 325
415 3300046542 Ga0495597_0056933 Ga0495597_0056933_159_1145 325
416 3300046616 Ga0495668_0001686 Ga0495668_0001686_17616_18617 325
417 3300046660 Ga0495625_0005523 Ga0495625_0005523_8418_9419 325
418 3300046665 Ga0495661_0018246 Ga0495661_0018246_2179_3180 325
419 3300046665 Ga0495661_0037267 Ga0495661_0037267_724_1725 325
420 3300046692 Ga0495671_0009333 Ga0495671_0009333_3370_4371 325
421 3300046694 Ga0495649_0006381 Ga0495649_0006381_2131_3132 325
422 3300046694 Ga0495649_0019153 Ga0495649_0019153_364_1365 325
423 3300046794 Ga0495589_0001694 Ga0495589_0001694_10470_11471 325
424 3300046810 Ga0495660_0005815 Ga0495660_0005815_2308_3309 325
425 3300046810 Ga0495660_0031179 Ga0495660_0031179_1785_2786 325
426 3300047320 Ga0495672_0010176 Ga0495672_0010176_3737_4738 325
427 3300047323 Ga0495683_0006052 Ga0495683_0006052_2618_3619 325
428 3300047470 Ga0495681_0005811 Ga0495681_0005811_7070_8071 325
429 3300047470 Ga0495681_0024214 Ga0495681_0024214_2097_3098 325
430 3300047472 Ga0495686_0000636 Ga0495686_0000636_39377_40378 325
431 3300047472 Ga0495686_0038885 Ga0495686_0038885_70_1071 325
432 3300047472 Ga0495686_0065281 Ga0495686_0065281_318_1319 325
433 3300048091 Ga0495626_0000057 Ga0495626_0000057_17264_18265 325
434 3300049459 Ga0495678_001121 Ga0495678_001121_3273_4274 325
435 iso_pu_bacteria 2511231010 2511290278 325
436 iso_pu_bacteria 2600255318 2601799482 325
437 iso_pu_bacteria 2603880185 2606078284 325
438 iso_pu_bacteria 2603880199 2606130392 325
439 iso_pu_bacteria 2623620443 2624480453 325
440 iso_pu_bacteria 2643221565 2643846119 325
441 iso_pu_bacteria 2713897149 2715759362 325
442 iso_pu_bacteria 8056177738 8056183948 325
443 iso_pu_bacteria 2825651385 2825651916 336
444 2162886007 SwRhRL2b_contig_409764 SwRhRL2b_0076.00002890 340
445 3300005288 Ga0065714_10002248 Ga0065714_1000224812 340
446 3300005289 Ga0065704_10072540 Ga0065704_100725404 340
447 3300046457 Ga0495590_0010123 Ga0495590_0010123_1489_2511 340
448 3300046491 Ga0495584_0027723 Ga0495584_0027723_833_1855 340
449 3300046507 Ga0495606_0038492 Ga0495606_0038492_1607_2629 340
450 3300046520 Ga0495637_0015434 Ga0495637_0015434_1495_2517 340
451 3300046530 Ga0495654_0018195 Ga0495654_0018195_1620_2642 340
452 3300046542 Ga0495597_0015902 Ga0495597_0015902_1489_2511 340
453 3300046694 Ga0495649_0024018 Ga0495649_0024018_1387_2409 340
454 3300047472 Ga0495686_0073779 Ga0495686_0073779_481_1503 340

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00126

HTH_1

Bacterial regulatory helix-turn-helix protein, lysR family

47

106

0.96

PF03466

LysR_substrate

LysR substrate binding domain

132

334

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
6l33-assembly2.cif.gz_C crystal structure of the regulatory domain of mext, a transcriptional activator in pseudomonas aeruginosa 0.942 102 298
3qp6-assembly1.cif.gz_A-2 crystal structure of cvir (chromobacterium violaceum 12472) bound to c6-hsl 0.9358 11 54
6l33-assembly1.cif.gz_A crystal structure of the regulatory domain of mext, a transcriptional activator in pseudomonas aeruginosa 0.9344 97 298
3qp5-assembly2.cif.gz_D crystal structure of cvir bound to antagonist chlorolactone (cl) 0.9317 10 54
6l33-assembly2.cif.gz_C crystal structure of the regulatory domain of mext, a transcriptional activator in pseudomonas aeruginosa 0.9284 102 298
ID Description Score Start End Superfamily
af_P30979_21_108_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9626 5 88 1.10.10.10
af_Q2FYW0_3_200_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9505 10 54 3.40.50.2300
af_P77744_4_93_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9486 11 91 1.10.10.10
af_P52696_4_93_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9422 11 91 1.10.10.10
af_P36771_5_92_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9417 10 90 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A0F4JEL2-F1-model_v4 LysR family transcriptional regulator 0.9569 10 85 GO:0003677
GO:0003700
GO:0032993
AF-A0A0F4JEL2-F1-model_v4 LysR family transcriptional regulator 0.9333 10 85 GO:0003677
GO:0003700
GO:0032993
AF-A0A377I3E8-F1-model_v4 LysR family transcriptional regulator protein 0.9155 93 303 GO:0006355
AF-A0A356HAD1-F1-model_v4 deleted 0.8938 100 299
AF-A0A7G6RG65-F1-model_v4 deleted 0.8717 2 96

Feature Viewer

pLDDT pTM Quality
84.26 0.71 High
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Predicted Structure (AlphaFold2)

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