F434442

General Info

Members Datasets Scaffolds Average Seq Length
399 309 202 283

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2511231023|2511370061
Length 327
Sequence SYMGLRMNRPLKLTSKPQLALQSYLDNLLQEIPEELPPVIEAQPEVVESTEALDEFQAAVLEEQARDAQKAAKPVAPVVSPAAAPVAKAPVALIETAEPVRAPVSTLAPLLQTQLLKTAPQPTVVEPAPVPAPVAPAPVEQTLVPPLVEVHLPPNNTPPPVETDGRPAWASEAFECLLFDVAGLTLAVPLVCLGSIYSLAGHELTPLFGQPEWFLGILPSQAGNLKVLDTARWVMPDRYRDDFRQGLQYVISVQGYEWGLAVHQVSRSLRLDPNEIKWRSHRGQRPWLAGTVIEHMCALLDVSALAELIASGGAKHLGGHKPLHKPT

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2511231004 Pseudomonas sp. GM102 Isolate Nodule
3 2511231006 Pseudomonas sp. GM17 Isolate Nodule
4 2511231007 Pseudomonas sp. GM18 Isolate Nodule
5 2511231008 Pseudomonas sp. GM21 Isolate Nodule
6 2511231010 Pseudomonas sp. GM25 Isolate Nodule
7 2511231011 Pseudomonas sp. GM30 Isolate Nodule
8 2511231012 Pseudomonas sp. GM33 Isolate Nodule
9 2511231015 Pseudomonas sp. GM49 Isolate Nodule
10 2511231016 Pseudomonas sp. GM50 Isolate Nodule
11 2511231017 Pseudomonas sp. GM55 Isolate Nodule
12 2511231018 Pseudomonas sp. GM60 Isolate Nodule
13 2511231019 Pseudomonas sp. GM67 Isolate Nodule
14 2511231020 Pseudomonas sp. GM74 Isolate Nodule
15 2511231021 Pseudomonas sp. GM78 Isolate Nodule
16 2511231022 Pseudomonas sp. GM79 Isolate Nodule
17 2511231023 Pseudomonas sp. GM80 Isolate Nodule
18 2511231024 Pseudomonas sp. GM84 Isolate Nodule
19 2511231031 Pseudomonas sp. GM16 Isolate Nodule
20 2554235132 Pseudomonas aeruginosa PGPR2 Isolate Unclassified
21 2554235231 Pseudomonas putida MTCC 5279 Isolate Unclassified
22 2582580891 Pseudomonas chlororaphis YL-1 Isolate Unclassified
23 2597489887 Pseudomonas chlororaphis aureofaciens 30-84 Isolate Rhizosphere
24 2599185160 Pseudomonas sp. NFPP25 Isolate Rhizoplane
25 2599185161 Pseudomonas sp. NFPP09 Isolate Rhizoplane
26 2599185162 Pseudomonas sp. NFPP10 Isolate Rhizoplane
27 2599185163 Pseudomonas sp. NFPP12 Isolate Rhizoplane
28 2599185164 Pseudomonas sp. NFPP13 Isolate Rhizoplane
29 2599185165 Pseudomonas sp. NFPP18 Isolate Rhizoplane
30 2599185166 Pseudomonas sp. NFPP08 Isolate Rhizoplane
31 2599185168 Pseudomonas sp. NFPP05 Isolate Rhizoplane
32 2599185181 Pseudomonas sp. NFPP17 Isolate Rhizoplane
33 2599185182 Pseudomonas sp. NFPP19 Isolate Rhizoplane
34 2599185185 Pseudomonas sp. NFPP07 Isolate Rhizoplane
35 2599185186 Pseudomonas sp. NFPP15 Isolate Rhizoplane
36 2599185188 Pseudomonas sp. NFACC45 Isolate Rhizoplane
37 2599185212 Pseudomonas sp. NFACC15-1 Isolate Rhizoplane
38 2599185248 Pseudomonas sp. NFACC08-1 Isolate Rhizoplane
39 2599185257 Pseudomonas sp. NFACC41-3 Isolate Rhizoplane
40 2599185289 Pseudomonas sp. NFACC51 Isolate Rhizoplane
41 2599185291 Pseudomonas sp. NFACC48-1 Isolate Rhizoplane
42 2599185300 Pseudomonas sp. NFACC39-1 Isolate Rhizoplane
43 2599185302 Pseudomonas sp. NFACC43 Isolate Rhizoplane
44 2599185304 Pseudomonas sp. NFACC47-1 Isolate Rhizoplane
45 2599185305 Pseudomonas sp. NFACC07-1 Isolate Rhizoplane
46 2599185306 Pseudomonas sp. NFACC16-2 Isolate Rhizoplane
47 2599185308 Pseudomonas sp. NFACC17-2 Isolate Rhizoplane
48 2599185309 Pseudomonas sp. NFACC49-2 Isolate Rhizoplane
49 2599185310 Pseudomonas sp. NFACC09-4 Isolate Rhizoplane
50 2599185311 Pseudomonas sp. NFACC04-2 Isolate Rhizoplane
51 2599185312 Pseudomonas sp. NFACC32-1 Isolate Rhizoplane
52 2599185313 Pseudomonas sp. NFACC05-1 Isolate Rhizoplane
53 2599185314 Pseudomonas sp. NFACC23-1 Isolate Rhizoplane
54 2599185315 Pseudomonas sp. NFACC44-2 Isolate Rhizoplane
55 2599185316 Pseudomonas sp. NFACC52 Isolate Rhizoplane
56 2599185317 Pseudomonas sp. NFACC06-1 Isolate Rhizoplane
57 2599185318 Pseudomonas sp. NFACC13-1 Isolate Rhizoplane
58 2599185319 Pseudomonas sp. NFACC24-1 Isolate Rhizoplane
59 2599185320 Pseudomonas sp. NFACC36 Isolate Rhizoplane
60 2599185321 Pseudomonas sp. NFACC54 Isolate Rhizoplane
61 2599185322 Pseudomonas sp. NFACC14 Isolate Rhizoplane
62 2599185323 Pseudomonas sp. NFACC37-1 Isolate Rhizoplane
63 2599185324 Pseudomonas sp. NFACC46-3 Isolate Rhizoplane
64 2599185325 Pseudomonas sp. NFACC56-3 Isolate Rhizoplane
65 2599185356 Pseudomonas sp. NFPP14 Isolate Rhizoplane
66 2600254930 Pseudomonas sp. NFIX10 Isolate Rhizoplane
67 2600254931 Pseudomonas sp. NFIX28 Isolate Rhizoplane
68 2600254954 Pseudomonas sp. NFACC19-2 Isolate Rhizoplane
69 2600255313 Pseudomonas sp. NFPP16 Isolate Rhizoplane
70 2600255318 Pseudomonas putida NFIX47 Isolate Rhizoplane
71 2600255389 Pseudomonas sp. NFPP33 Isolate Rhizoplane
72 2603880185 Pseudomonas sp. NFIX46 Isolate Rhizoplane
73 2603880199 Pseudomonas sp. NFIX49 Isolate Rhizoplane
74 2606217733 Pseudomonas aeruginosa NFHH01 Isolate Rhizoplane
75 2619619299 Pseudomonas veronii R4 Genome sequencing Isolate Unclassified
76 2623620443 Pseudomonas sp. DR 5-09 Isolate Unclassified
77 2623620446 Pseudomonas sp. GR 6-02 Isolate Unclassified
78 2643221589 Pseudomonas sp. Root68 Isolate Unclassified
79 2643221602 Pseudomonas sp. Root71 Isolate Unclassified
80 2643221633 Pseudomonas sp. Root329 Isolate Unclassified
81 2643221650 Pseudomonas sp. Root401 Isolate Unclassified
82 2651869719 Genome Sequence of Pseudomonas fluorescens UM270 Isolate Rhizosphere
83 2667528170 Pseudomonas sp. NFACC50-1 Isolate Rhizoplane
84 2667528171 Pseudomonas sp. NFPP22 Isolate Rhizoplane
85 2667528176 Pseudomonas sp. NFACC11-2 Isolate Rhizoplane
86 2671180172 Pseudomonas sp. NFIX51 Isolate Rhizoplane
87 2675903420 Pseudomonas fluorescens Ps006 Isolate Unclassified
88 2675903515 Pseudomonas thivervalensis DSM 13194 Isolate Unclassified
89 2713897148 Pseudomonas fluorescens SF39a Isolate Rhizosphere
90 2713897149 Pseudomonas fluorescens SF4c Isolate Rhizosphere
91 2738541265 Pseudomonas sp. GV077 Isolate Unclassified
92 2738541282 Pseudomonas sp. GV058 Isolate Unclassified
93 2738541303 Pseudomonas sp. GV105 Isolate Unclassified
94 2738543004 Pseudomonas sp. GV085 Isolate Unclassified
95 2738543015 Pseudomonas sp. GV041 Isolate Unclassified
96 2738543016 Pseudomonas sp. GV012 Isolate Unclassified
97 2738543020 Pseudomonas sp. GV054 Isolate Unclassified
98 2738543021 Pseudomonas sp. GV071 Isolate Unclassified
99 2738543025 Pseudomonas sp. GV091 Isolate Unclassified
100 2740892503 Pseudomonas chlororaphis piscium PCL1391 Isolate Unclassified
101 2744054620 Pseudomonas thivervalensis LMG 21626 Isolate Unclassified
102 2765235841 Pseudomonas putida AA7 Isolate Unclassified
103 2773857670 Pseudomonas sp. 478 Isolate Unclassified
104 2784132063 Pseudomonas sp. 424 Isolate Unclassified
105 2784132072 Pseudomonas sp. 460 Isolate Unclassified
106 2791355520 Pseudomonas sp. s211(2017) Isolate Unclassified
107 2806310737 Pseudomonas mosselii BS011 Isolate Unclassified
108 2806310745 Pseudomonas mosselii PtA1 Isolate Unclassified
109 2808606361 Pseudomonas sp. SJZ075 Isolate Rhizosphere
110 2808606373 Pseudomonas sp. SLBN-2 Isolate Unclassified
111 2808606376 Pseudomonas sp. SJZ074 Isolate Rhizosphere
112 2808606377 Pseudomonas sp. SJZ083 Isolate Rhizosphere
113 2808606378 Pseudomonas sp. SJZ078 Isolate Rhizosphere
114 2808606380 Pseudomonas sp. SJZ085 Isolate Rhizosphere
115 2808606381 Pseudomonas sp. SJZ077 Isolate Rhizosphere
116 2808606382 Pseudomonas sp. SJZ080 Isolate Rhizosphere
117 2808606383 Pseudomonas sp. SJZ124 Isolate Rhizosphere
118 2808606385 Pseudomonas sp. SJZ103 Isolate Rhizosphere
119 2808606388 Pseudomonas sp. SJZ094 Isolate Rhizosphere
120 2808606389 Pseudomonas sp. SJZ101 Isolate Rhizosphere
121 2811994881 Pseudomonas sp. SLBN-26 Isolate Unclassified
122 2816332298 Pseudomonas veronii R02 Isolate Rhizosphere
123 2818991456 Pseudomonas koreensis 3286 Isolate Rhizosphere
124 2818991464 Pseudomonas protegens 3295 Isolate Rhizosphere
125 2825651385 Pseudomonas brassicacearum L13-6-12 Isolate Rhizosphere
126 2826581358 Pseudomonas viridiflava CDRTc14 Isolate Unclassified
127 2842805378 Pseudomonas sp. R-72599 Isolate Unclassified
128 2842815866 Pseudomonas sp. R-72210 Isolate Unclassified
129 2842832357 Pseudomonas sp. R-72164 Isolate Unclassified
130 2842843487 Pseudomonas sp. R-72074 Isolate Unclassified
131 2842849001 Pseudomonas sp. R-72008 Isolate Unclassified
132 2852612431 Pseudomonas sp. SJZ073 Isolate Rhizosphere
133 2852657418 Pseudomonas sp. JAI115 Isolate Rhizosphere
134 2852667396 Pseudomonas sp. JAI120 Isolate Rhizosphere
135 2860339153 Pseudomonas sp. JAI111 Isolate Rhizosphere
136 2878029506 Pseudomonas fluorescens DR397 Isolate Rhizosphere
137 2880230671 Pseudomonas fluorescens LBUM677 Isolate Unclassified
138 2904518522 Pseudomonas fluorescens 4488 Isolate Rhizosphere
139 2904550169 Stutzerimonas stutzeri 1099 Isolate Rhizosphere
140 2913036834 Pseudomonas viciae 11K1 Isolate Rhizosphere
141 2917070673 Pseudomonas protegens CHA0 Isolate Rhizosphere
142 2919063839 Pseudomonas pharyngis 1098 Isolate Rhizosphere
143 2919385768 Pseudomonas sp. 2957 Isolate Unclassified
144 2919456309 Pseudomonas sp. 3296 Isolate Rhizosphere
145 2919481497 Pseudomonas brassicacearum 3432 Isolate Unclassified
146 2919487758 Pseudomonas koreensis 3441 Isolate Unclassified
147 2919501602 Pseudomonas alcaliphila 3512 Isolate Unclassified
148 2919697872 Pseudomonas frederiksbergensis 4169 Isolate Unclassified
149 2923153595 Pseudomonas chlororaphis piscium PCL1391 Isolate Unclassified
150 2923519811 Pseudomonas otitidis SLBN-103 Isolate Rhizosphere
151 2923586266 Pseudomonas fluorescens 1550 Isolate Rhizosphere
152 2926063275 Pseudomonas sp. 3400 Isolate Unclassified
153 2929144301 Pseudomonas sp. R-71838 Hybrid assembly Isolate Unclassified
154 2931369376 Pseudomonas fluorescens DR133 Isolate Rhizosphere
155 2931396565 Pseudomonas sp. DR48 Isolate Rhizosphere
156 2935353572 Pseudomonas protegens TECH19 Isolate Unclassified
157 2946006987 Pseudomonas sp. W3I7 Isolate Rhizosphere
158 2946027586 Pseudomonas sp. W4I3 Isolate Rhizosphere
159 2969304461 Pseudomonas sp. R84 Isolate Rhizosphere
160 2974289157 Pseudomonas fluorescens SORGH_AS 191 Isolate Unclassified
161 2984286254 Pseudomonas chlororaphis aurantiaca JD37 Isolate Rhizosphere
162 2988728565 Pseudomonas corrugata RM1-1-4 Isolate Rhizosphere
163 2990196909 Pseudomonas mangrovi TC-11 Isolate Unclassified
164 2998139840 Pseudomonas iranensis SWRI54 Isolate Rhizosphere
165 3007252601 Pseudomonas punonensis D1-6 Isolate Unclassified
166 3007395558 Pseudomonas chlororaphis PCL1601 Isolate Rhizosphere
167 3007419365 Pseudomonas vanderleydeniana RW8P3 Isolate Unclassified
168 3007511990 Pseudomonas fluorescens G20-18 Isolate Rhizosphere
169 3007614139 Pseudomonas sp. PB106 Isolate Unclassified
170 3007619802 Pseudomonas sp. PB120 Isolate Unclassified
171 3007718800 Pseudomonas fluorescens BW11P2 Isolate Rhizosphere
172 3007803356 Pseudomonas sp. CM27 Isolate Unclassified
173 3007855910 Pseudomonas khorasanensis SWRI153 Isolate Rhizosphere
174 3007861166 Pseudomonas hamedanensis SWRI65 Isolate Rhizosphere
175 3007866637 Pseudomonas marvdashtae SWRI102 Isolate Rhizosphere
176 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
177 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
178 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
179 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
180 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
181 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
182 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
183 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
184 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
185 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
186 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
187 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
188 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
189 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
190 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
191 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
192 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
193 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
194 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
195 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
196 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
197 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
198 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
199 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
200 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
201 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
202 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
203 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
204 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
205 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
206 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
207 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
208 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
209 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
210 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
211 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
212 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
213 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
214 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
215 3300042139 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0727L_E14_072516_1442 Metagenome Rhizosphere
216 3300042185 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515W_E14_080116_2592 Metagenome Rhizosphere
217 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
218 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
219 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
220 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
221 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
222 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
223 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
224 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
225 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
226 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
227 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
228 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
229 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
230 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
231 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
232 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
233 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
234 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
235 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
236 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
237 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
238 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
239 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
240 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
241 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
242 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
243 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
244 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
245 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
246 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
247 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
248 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
249 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
250 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
251 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
252 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
253 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
254 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
255 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
256 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
257 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
258 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
259 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
260 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
261 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
262 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
263 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
264 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
265 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
266 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
267 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
268 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
269 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
270 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
271 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
272 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
273 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
274 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
275 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
276 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
277 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
278 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
279 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
280 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
281 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
282 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
283 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
284 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
285 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
286 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
287 637000220 Pseudomonas protegens Pf-5 Isolate Rhizoplane
288 651053060 Stutzerimonas stutzeri CMT.A.9 Isolate Rhizosphere
289 8015687852 Pseudomonas chlororaphis aurantiaca RP4 Isolate Rhizosphere
290 8019769354 Pseudomonas sp. MSSRFD41 Isolate Rhizosphere
291 8019775933 Pseudomonas sp. PvR083 Isolate Rhizosphere
292 8029995093 Pseudomonas atacamensis SM1 Isolate Rhizosphere
293 8034962539 Pseudomonas sediminis PI11 Isolate Rhizosphere
294 8054285046 Pseudomonas petroselini MAFF 311096 Isolate Nodule
295 8054503363 Pseudomonas sivasensis BsEB-1 Isolate Unclassified
296 8054929484 Pseudomonas vlassakiae RW4S1 Isolate Rhizosphere
297 8055770955 Pseudomonas chlororaphis qlu-1 Isolate Rhizosphere
298 8055878733 Pseudomonas palmensis BBB001 Isolate Rhizosphere
299 8056115690 Pseudomonas muyukensis COW39 Isolate Rhizosphere
300 8056120720 Pseudomonas maumuensis COW77 Isolate Rhizosphere
301 8056125926 Pseudomonas azerbaijanorientalis SWRI123 Isolate Rhizosphere
302 8056137416 Pseudomonas fakonensis COW40 Isolate Rhizosphere
303 8056143049 Pseudomonas alvandae SWRI17 Isolate Rhizosphere
304 8056155041 Pseudomonas farris SWRI79 Isolate Rhizosphere
305 8056161164 Pseudomonas azadiae SWRI103 Isolate Rhizosphere
306 8056172158 Pseudomonas ekonensis COR58 Isolate Rhizosphere
307 8056177738 Pseudomonas azerbaijanoccidentalis SWRI74 Isolate Rhizosphere
308 8056569372 Pseudomonas serboccidentalis IT-P374 Isolate Rhizosphere
309 8057798959 Pseudomonas piscis BW16M1 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 50.63
Metatranscriptomes 0
Isolates 49.37

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.76
Nodule 6.02
Rhizoplane 15.04
Rhizosphere 56.39
Stem 0
Stem Tuber 0
Unclassified 18.8

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1910630 2162886007 Bacteria 4616
2 JGI25162J39368_1000212 3300002737 Bacteria 61036
3 JGI25163J39215_1000503 3300002771 Bacteria 11630
4 JGI25164J39214_1000051 3300002772 Bacteria 122377
5 JGI25165J46597_1000091 3300003214 Bacteria 167941
6 Ga0055530_10000158 3300003791 Bacteria 61440
7 Ga0055540_1000182 3300003792 Bacteria 61440
8 Ga0065714_10002255 3300005288 Bacteria 42568
9 Ga0065714_10005121 3300005288 Bacteria 5394
10 Ga0065714_10116355 3300005288 Bacteria 1393
11 Ga0065704_10070596 3300005289 Bacteria 19482
12 Ga0075362_10076448 3300006177 Bacteria 1537
13 Ga0099823_1000984 3300006944 Bacteria 21889
14 Ga0079104_1000545 3300006946 Bacteria 39305
15 Ga0099826_10002700 3300006948 Bacteria 11593
16 Ga0105251_10000060 3300009011 Bacteria 102799
17 Ga0105251_10040434 3300009011 Bacteria 2273
18 Ga0105251_10076646 3300009011 Bacteria 1551
19 Ga0105251_10103080 3300009011 Bacteria 1303
20 Ga0105244_10018535 3300009036 Bacteria 3902
21 Ga0105244_10083975 3300009036 Bacteria 1573
22 Ga0157373_10005441 3300013100 Bacteria 9564
23 Ga0157373_10008944 3300013100 Bacteria 7408
24 Ga0157372_10102990 3300013307 Bacteria 3261
25 Ga0182006_1009115 3300015261 Bacteria 4462
26 Ga0163161_10315586 3300017792 Bacteria 1234
27 Ga0209760_100022 3300025207 Bacteria 159218
28 Ga0207427_100047 3300025231 Bacteria 240409
29 Ga0209437_100009 3300025233 Bacteria 915954
30 Ga0209233_1000032 3300025261 Bacteria 623596
31 Ga0209050_1000009 3300025298 Bacteria 1047265
32 Ga0209051_1000008 3300025303 Bacteria 706935
33 Ga0209257_1014823 3300025304 Bacteria 3308
34 Ga0207696_1001395 3300025711 Bacteria 13209
35 Ga0207655_1000461 3300025728 Bacteria 53372
36 Ga0207655_1000645 3300025728 Bacteria 41696
37 Ga0207655_1004518 3300025728 Bacteria 9838
38 Ga0207655_1059008 3300025728 Bacteria 1496
39 Ga0207713_1000150 3300025735 Bacteria 105170
40 Ga0207713_1003379 3300025735 Bacteria 10938
41 Ga0207713_1027354 3300025735 Bacteria 2592
42 Ga0209281_1000018 3300027111 Bacteria 579091
43 Ga0209389_1000018 3300027296 Bacteria 179898
44 Ga0316177_1151181 3300030731 Bacteria 2249
45 Ga0307408_100158038 3300031548 Bacteria 1797
46 Ga0307414_10257835 3300032004 Bacteria 1453
47 Ga0439438_004695 3300041405 Bacteria 5182
48 Ga0439466_0007541 3300041411 Bacteria 4115
49 Ga0439466_0018824 3300041411 Bacteria 2474
50 Ga0439432_036173 3300042006 Bacteria 1580
51 Ga0439452_016468 3300042010 Bacteria 2007
52 Ga0439456_011482 3300042013 Bacteria 1832
53 Ga0439463_000685 3300042016 Bacteria 9419
54 Ga0450904_003441 3300042139 Bacteria 1713
55 Ga0450909_008018 3300042185 Bacteria 1532
56 Ga0495617_009673 3300046452 Bacteria 3307
57 Ga0495617_030161 3300046452 Bacteria 1823
58 Ga0495617_055936 3300046452 Bacteria 1308
59 Ga0495627_001575 3300046453 Bacteria 12922
60 Ga0495627_015386 3300046453 Bacteria 2642
61 Ga0495590_0024898 3300046457 Bacteria 2106
62 Ga0495591_001051 3300046458 Bacteria 18560
63 Ga0495591_001253 3300046458 Bacteria 16253
64 Ga0495591_001297 3300046458 Bacteria 15823
65 Ga0495638_0049623 3300046460 Bacteria 2623
66 Ga0495653_0001863 3300046463 Bacteria 16657
67 Ga0495650_0000221 3300046471 Bacteria 118284
68 Ga0495605_0000032 3300046474 Bacteria 210550
69 Ga0495605_0003265 3300046474 Bacteria 9735
70 Ga0495605_0006439 3300046474 Bacteria 6748
71 Ga0495639_0117219 3300046475 Bacteria 1268
72 Ga0495584_0014918 3300046491 Bacteria 3958
73 Ga0495585_0077048 3300046492 Bacteria 1810
74 Ga0495594_0000964 3300046499 Bacteria 14958
75 Ga0495596_0011246 3300046500 Bacteria 3866
76 Ga0495607_0002661 3300046501 Bacteria 14311
77 Ga0495607_0003469 3300046501 Bacteria 12075
78 Ga0495607_0039409 3300046501 Bacteria 2821
79 Ga0495607_0110338 3300046501 Bacteria 1459
80 Ga0495583_0000052 3300046506 Bacteria 211902
81 Ga0495583_0006401 3300046506 Bacteria 7705
82 Ga0495583_0017535 3300046506 Bacteria 3797
83 Ga0495606_0000698 3300046507 Bacteria 52041
84 Ga0495616_0013537 3300046513 Bacteria 4597
85 Ga0495616_0061149 3300046513 Bacteria 1847
86 Ga0495620_0052867 3300046515 Bacteria 1722
87 Ga0495630_0109395 3300046517 Bacteria 2093
88 Ga0495631_0004610 3300046518 Bacteria 7297
89 Ga0495631_0011309 3300046518 Bacteria 4393
90 Ga0495631_0043299 3300046518 Bacteria 1986
91 Ga0495632_0001503 3300046519 Bacteria 19285
92 Ga0495632_0008717 3300046519 Bacteria 6186
93 Ga0495632_0034212 3300046519 Bacteria 2602
94 Ga0495632_0040908 3300046519 Bacteria 2331
95 Ga0495632_0088544 3300046519 Bacteria 1470
96 Ga0495637_0000023 3300046520 Bacteria 172407
97 Ga0495637_0036759 3300046520 Bacteria 2130
98 Ga0495637_0042706 3300046520 Bacteria 1938
99 Ga0495637_0047942 3300046520 Bacteria 1801
100 Ga0495637_0052848 3300046520 Bacteria 1693
101 Ga0495643_0000488 3300046522 Bacteria 50207
102 Ga0495643_0012119 3300046522 Bacteria 5212
103 Ga0495643_0054098 3300046522 Bacteria 2150
104 Ga0495644_0017239 3300046523 Bacteria 2761
105 Ga0495648_0002803 3300046524 Bacteria 15688
106 Ga0495648_0019402 3300046524 Bacteria 4780
107 Ga0495648_0054115 3300046524 Bacteria 2426
108 Ga0495666_0081046 3300046526 Bacteria 1535
109 Ga0495654_0000639 3300046530 Bacteria 27630
110 Ga0495654_0001730 3300046530 Bacteria 14663
111 Ga0495654_0007842 3300046530 Bacteria 5937
112 Ga0495654_0099826 3300046530 Bacteria 1337
113 Ga0495654_0111954 3300046530 Bacteria 1244
114 Ga0495654_0115033 3300046530 Bacteria 1223
115 Ga0495609_0000032 3300046538 Bacteria 211021
116 Ga0495609_0000382 3300046538 Bacteria 37599
117 Ga0495597_0002903 3300046542 Bacteria 10426
118 Ga0495645_0118327 3300046543 Bacteria 1868
119 Ga0495622_0014421 3300046557 Bacteria 3669
120 Ga0495633_0000040 3300046558 Bacteria 177876
121 Ga0495611_0000589 3300046648 Bacteria 20938
122 Ga0495611_0007814 3300046648 Bacteria 4540
123 Ga0495611_0011676 3300046648 Bacteria 3726
124 Ga0495625_0000010 3300046660 Bacteria 381775
125 Ga0495625_0266318 3300046660 Bacteria 1107
126 Ga0495661_0000020 3300046665 Bacteria 196901
127 Ga0495661_0000037 3300046665 Bacteria 164234
128 Ga0495661_0051876 3300046665 Bacteria 2474
129 Ga0495657_0204817 3300046675 Bacteria 1201
130 Ga0495623_0068208 3300046679 Bacteria 2218
131 Ga0495670_0003941 3300046691 Bacteria 7287
132 Ga0495670_0007226 3300046691 Bacteria 5462
133 Ga0495671_0013658 3300046692 Bacteria 4389
134 Ga0495671_0033008 3300046692 Bacteria 2639
135 Ga0495671_0038559 3300046692 Bacteria 2414
136 Ga0495671_0113298 3300046692 Bacteria 1324
137 Ga0495671_0126459 3300046692 Bacteria 1246
138 Ga0495649_0002258 3300046694 Bacteria 13696
139 Ga0495649_0077696 3300046694 Bacteria 1776
140 Ga0495649_0092694 3300046694 Bacteria 1608
141 Ga0495589_0081947 3300046794 Bacteria 1569
142 Ga0495600_0047947 3300046809 Bacteria 2787
143 Ga0495660_0000768 3300046810 Bacteria 24134
144 Ga0495660_0065634 3300046810 Bacteria 1936
145 Ga0495660_0078465 3300046810 Bacteria 1735
146 Ga0495660_0123047 3300046810 Bacteria 1310
147 Ga0495660_0142910 3300046810 Bacteria 1188
148 Ga0495672_0004780 3300047320 Bacteria 10925
149 Ga0495672_0010599 3300047320 Bacteria 6552
150 Ga0495672_0052447 3300047320 Bacteria 2395
151 Ga0495672_0106287 3300047320 Bacteria 1513
152 Ga0495672_0106694 3300047320 Bacteria 1509
153 Ga0495676_0000002 3300047321 Bacteria 373918
154 Ga0495683_0000011 3300047323 Bacteria 212053
155 Ga0495683_0000089 3300047323 Bacteria 92081
156 Ga0495675_0041882 3300047444 Bacteria 2918
157 Ga0495679_001367 3300047446 Bacteria 14010
158 Ga0495673_0003566 3300047469 Bacteria 10226
159 Ga0495673_0011248 3300047469 Bacteria 4825
160 Ga0495673_0041114 3300047469 Bacteria 2084
161 Ga0495673_0104869 3300047469 Bacteria 1137
162 Ga0495673_0104898 3300047469 Bacteria 1137
163 Ga0495681_0002330 3300047470 Bacteria 13648
164 Ga0495681_0009755 3300047470 Bacteria 5879
165 Ga0495681_0011045 3300047470 Bacteria 5414
166 Ga0495681_0030038 3300047470 Bacteria 2774
167 Ga0495681_0055148 3300047470 Bacteria 1854
168 Ga0495684_0057665 3300047471 Bacteria 2959
169 Ga0495686_0009309 3300047472 Bacteria 7087
170 Ga0495593_0056206 3300047673 Bacteria 2069
171 Ga0495626_0000007 3300048091 Bacteria 276374
172 Ga0496102_0085440 3300048905 Bacteria 2913
173 Ga0496102_0175682 3300048905 Bacteria 2017
174 Ga0496102_0359318 3300048905 Bacteria 1371
175 Ga0496114_0014326 3300048917 Bacteria 6361
176 Ga0496116_0095300 3300048919 Bacteria 1796
177 Ga0496117_0004263 3300048920 Bacteria 15954
178 Ga0496117_0101247 3300048920 Bacteria 1823
179 Ga0496117_0112635 3300048920 Bacteria 1691
180 Ga0496118_0003932 3300048921 Bacteria 18177
181 Ga0496118_0046849 3300048921 Bacteria 3358
182 Ga0496118_0074062 3300048921 Bacteria 2436
183 Ga0496118_0142593 3300048921 Bacteria 1515
184 Ga0496121_0006247 3300048924 Bacteria 14916
185 Ga0496121_0184805 3300048924 Bacteria 1500
186 Ga0496122_0001401 3300048925 Bacteria 39147
187 Ga0496122_0001761 3300048925 Bacteria 33221
188 Ga0496122_0057735 3300048925 Bacteria 2879
189 Ga0496123_0000437 3300048926 Bacteria 74882
190 Ga0496123_0004322 3300048926 Bacteria 15077
191 Ga0496124_0021185 3300048927 Bacteria 5992
192 Ga0496124_0061136 3300048927 Bacteria 3158
193 Ga0496124_0082963 3300048927 Bacteria 2630
194 Ga0496125_0024015 3300048928 Bacteria 5615
195 Ga0495678_000033 3300049459 Bacteria 211804
196 Ga0495678_000787 3300049459 Bacteria 28437
197 Ga0495678_052362 3300049459 Bacteria 1572
198 Ga0501032_0008112 3300049569 Bacteria 7657
199 Ga0501039_0300170 3300049575 Bacteria 1263
200 Ga0501241_003630 3300049758 Bacteria 2910
201 nmdc:mga08x19_162434_c1 3300050514 Bacteria 1518
202 Ga0500618_018577 3300053125 Bacteria 1718

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046452 Ga0495617_055936 Ga0495617_055936_49_906 217
2 3300046474 Ga0495605_0000032 Ga0495605_0000032_138369_139376 223
3 3300046499 Ga0495594_0000964 Ga0495594_0000964_3156_4163 223
4 3300046506 Ga0495583_0000052 Ga0495583_0000052_139729_140736 223
5 3300046518 Ga0495631_0043299 Ga0495631_0043299_802_1809 223
6 3300046524 Ga0495648_0019402 Ga0495648_0019402_992_1999 223
7 3300046538 Ga0495609_0000032 Ga0495609_0000032_71149_72156 223
8 3300046542 Ga0495597_0002903 Ga0495597_0002903_4659_5666 223
9 3300046558 Ga0495633_0000040 Ga0495633_0000040_37482_38489 223
10 3300046648 Ga0495611_0007814 Ga0495611_0007814_2709_3716 223
11 3300046665 Ga0495661_0000037 Ga0495661_0000037_137791_138798 223
12 3300046691 Ga0495670_0003941 Ga0495670_0003941_959_1966 223
13 3300046692 Ga0495671_0013658 Ga0495671_0013658_1555_2562 223
14 3300046810 Ga0495660_0000768 Ga0495660_0000768_4224_5231 223
15 3300047323 Ga0495683_0000011 Ga0495683_0000011_139894_140901 223
16 3300047446 Ga0495679_001367 Ga0495679_001367_10581_11588 223
17 3300047470 Ga0495681_0011045 Ga0495681_0011045_151_1158 223
18 3300049459 Ga0495678_000033 Ga0495678_000033_71736_72743 223
19 3300046530 Ga0495654_0001730 Ga0495654_0001730_2937_3938 226
20 3300046694 Ga0495649_0002258 Ga0495649_0002258_3121_4230 228
21 iso_pu_bacteria 2600254954 2600446765 228
22 iso_pu_bacteria 2600255389 2602010697 228
23 iso_pu_bacteria 8034962539 8034963823 228
24 iso_pu_bacteria 2919501602 2919505386 230
25 iso_pu_bacteria 2926063275 2926067063 230
26 iso_pu_bacteria 3007252601 3007256798 233
27 3300009036 Ga0105244_10018535 Ga0105244_100185352 234
28 3300009036 Ga0105244_10083975 Ga0105244_100839752 234
29 3300025728 Ga0207655_1004518 Ga0207655_10045182 234
30 3300025728 Ga0207655_1059008 Ga0207655_10590082 234
31 iso_pu_bacteria 2811994881 2812365901 235
32 iso_pu_bacteria 2923519811 2923519922 235
33 3300009011 Ga0105251_10040434 Ga0105251_100404342 236
34 3300046463 Ga0495653_0001863 Ga0495653_0001863_12122_13159 237
35 3300049758 Ga0501241_003630 Ga0501241_003630_1589_2530 237
36 iso_pu_bacteria 2990196909 2990198884 237
37 3300009011 Ga0105251_10000060 Ga0105251_1000006070 238
38 3300025735 Ga0207713_1000150 Ga0207713_100015030 238
39 3300046458 Ga0495591_001051 Ga0495591_001051_4073_5029 238
40 3300046518 Ga0495631_0011309 Ga0495631_0011309_1703_2662 238
41 3300046519 Ga0495632_0008717 Ga0495632_0008717_4705_5664 238
42 3300046522 Ga0495643_0012119 Ga0495643_0012119_3886_4845 238
43 3300047320 Ga0495672_0106694 Ga0495672_0106694_209_1168 238
44 3300048921 Ga0496118_0046849 Ga0496118_0046849_1011_1994 238
45 3300048924 Ga0496121_0006247 Ga0496121_0006247_4380_5333 238
46 3300048925 Ga0496122_0001761 Ga0496122_0001761_8186_9169 238
47 3300048926 Ga0496123_0004322 Ga0496123_0004322_1471_2454 238
48 iso_pu_bacteria 2808606373 2808904059 239
49 3300046453 Ga0495627_001575 Ga0495627_001575_10339_11190 240
50 3300047320 Ga0495672_0004780 Ga0495672_0004780_9628_10479 240
51 3300049569 Ga0501032_0008112 Ga0501032_0008112_4422_5279 241
52 3300049575 Ga0501039_0300170 Ga0501039_0300170_245_1102 241
53 3300005288 Ga0065714_10116355 Ga0065714_101163552 242
54 3300006177 Ga0075362_10076448 Ga0075362_100764482 242
55 3300032004 Ga0307414_10257835 Ga0307414_102578352 242
56 3300046519 Ga0495632_0001503 Ga0495632_0001503_16483_17442 242
57 3300046520 Ga0495637_0047942 Ga0495637_0047942_590_1549 242
58 3300046660 Ga0495625_0266318 Ga0495625_0266318_25_972 242
59 3300048927 Ga0496124_0082963 Ga0496124_0082963_1019_1954 242
60 3300050514 nmdc:mga08x19_162434_c1 nmdc:mga08x19_162434_c1_22_957 242
61 3300042006 Ga0439432_036173 Ga0439432_036173_486_1412 243
62 3300042013 Ga0439456_011482 Ga0439456_011482_114_1049 243
63 3300046543 Ga0495645_0118327 Ga0495645_0118327_370_1326 243
64 3300046648 Ga0495611_0011676 Ga0495611_0011676_243_1202 243
65 3300046471 Ga0495650_0000221 Ga0495650_0000221_18818_19726 244
66 3300025735 Ga0207713_1003379 Ga0207713_10033794 245
67 3300046452 Ga0495617_009673 Ga0495617_009673_170_1093 245
68 3300046519 Ga0495632_0088544 Ga0495632_0088544_114_1037 245
69 3300046530 Ga0495654_0111954 Ga0495654_0111954_183_1106 245
70 3300046692 Ga0495671_0038559 Ga0495671_0038559_411_1334 245
71 3300046810 Ga0495660_0123047 Ga0495660_0123047_329_1177 245
72 3300047469 Ga0495673_0011248 Ga0495673_0011248_2224_3147 245
73 3300047469 Ga0495673_0104869 Ga0495673_0104869_139_1062 245
74 iso_pu_bacteria 2606217733 2608380327 245
75 3300025728 Ga0207655_1000645 Ga0207655_100064539 246
76 3300041411 Ga0439466_0018824 Ga0439466_0018824_440_1339 246
77 3300046458 Ga0495591_001297 Ga0495591_001297_7352_8275 246
78 3300046474 Ga0495605_0006439 Ga0495605_0006439_439_1362 246
79 3300046491 Ga0495584_0014918 Ga0495584_0014918_927_1850 246
80 3300046492 Ga0495585_0077048 Ga0495585_0077048_76_999 246
81 3300046500 Ga0495596_0011246 Ga0495596_0011246_2769_3692 246
82 3300046501 Ga0495607_0039409 Ga0495607_0039409_972_1895 246
83 3300046506 Ga0495583_0006401 Ga0495583_0006401_181_1104 246
84 3300046515 Ga0495620_0052867 Ga0495620_0052867_76_999 246
85 3300046518 Ga0495631_0004610 Ga0495631_0004610_4345_5268 246
86 3300046519 Ga0495632_0034212 Ga0495632_0034212_1000_1923 246
87 3300046520 Ga0495637_0000023 Ga0495637_0000023_960_1883 246
88 3300046522 Ga0495643_0054098 Ga0495643_0054098_872_1795 246
89 3300046523 Ga0495644_0017239 Ga0495644_0017239_839_1762 246
90 3300046524 Ga0495648_0054115 Ga0495648_0054115_592_1515 246
91 3300046530 Ga0495654_0115033 Ga0495654_0115033_162_1085 246
92 3300046538 Ga0495609_0000382 Ga0495609_0000382_29122_30045 246
93 3300046557 Ga0495622_0014421 Ga0495622_0014421_987_1910 246
94 3300046648 Ga0495611_0000589 Ga0495611_0000589_14348_15271 246
95 3300046660 Ga0495625_0000010 Ga0495625_0000010_276555_277478 246
96 3300046665 Ga0495661_0000020 Ga0495661_0000020_6114_7037 246
97 3300046692 Ga0495671_0113298 Ga0495671_0113298_76_999 246
98 3300046810 Ga0495660_0065634 Ga0495660_0065634_893_1816 246
99 3300046810 Ga0495660_0078465 Ga0495660_0078465_432_1388 246
100 3300047320 Ga0495672_0010599 Ga0495672_0010599_3764_4687 246
101 3300047321 Ga0495676_0000002 Ga0495676_0000002_105174_106097 246
102 3300047470 Ga0495681_0009755 Ga0495681_0009755_382_1305 246
103 3300047472 Ga0495686_0009309 Ga0495686_0009309_1484_2407 246
104 3300048091 Ga0495626_0000007 Ga0495626_0000007_105639_106562 246
105 3300048924 Ga0496121_0184805 Ga0496121_0184805_200_1090 246
106 3300048927 Ga0496124_0021185 Ga0496124_0021185_693_1646 246
107 3300048927 Ga0496124_0061136 Ga0496124_0061136_1969_2874 246
108 3300053125 Ga0500618_018577 Ga0500618_018577_314_1417 246
109 iso_pu_bacteria 2554235132 2554816271 246
110 iso_pu_bacteria 8056161164 8056162075 246
111 3300046453 Ga0495627_015386 Ga0495627_015386_363_1262 247
112 3300046506 Ga0495583_0017535 Ga0495583_0017535_272_1231 247
113 3300046513 Ga0495616_0013537 Ga0495616_0013537_344_1243 247
114 3300046524 Ga0495648_0002803 Ga0495648_0002803_10560_11519 247
115 3300046530 Ga0495654_0007842 Ga0495654_0007842_3742_4701 247
116 3300046530 Ga0495654_0099826 Ga0495654_0099826_252_1151 247
117 3300046665 Ga0495661_0051876 Ga0495661_0051876_1314_2213 247
118 3300046692 Ga0495671_0033008 Ga0495671_0033008_1669_2628 247
119 3300046810 Ga0495660_0142910 Ga0495660_0142910_170_1069 247
120 3300047320 Ga0495672_0052447 Ga0495672_0052447_683_1582 247
121 3300047469 Ga0495673_0003566 Ga0495673_0003566_18_977 247
122 iso_pu_bacteria 2946006987 2946008542 247
123 iso_pu_bacteria 651053060 651176542 247
124 3300006944 Ga0099823_1000984 Ga0099823_100098414 248
125 3300027296 Ga0209389_1000018 Ga0209389_100001896 248
126 3300047470 Ga0495681_0055148 Ga0495681_0055148_479_1321 248
127 iso_pu_bacteria 2511231024 2511376169 248
128 3300042010 Ga0439452_016468 Ga0439452_016468_677_1612 249
129 3300046474 Ga0495605_0003265 Ga0495605_0003265_3344_4300 249
130 3300046522 Ga0495643_0000488 Ga0495643_0000488_3809_4702 249
131 iso_pu_bacteria 2808606385 2808977809 249
132 iso_pu_bacteria 2808606388 2808993289 249
133 iso_pu_bacteria 2852612431 2852613120 249
134 iso_pu_bacteria 2852667396 2852669145 249
135 iso_pu_bacteria 8054503363 8054507472 249
136 3300048905 Ga0496102_0085440 Ga0496102_0085440_1485_2438 250
137 3300002737 JGI25162J39368_1000212 JGI25162J39368_100021213 251
138 3300002771 JGI25163J39215_1000503 JGI25163J39215_10005038 251
139 3300002772 JGI25164J39214_1000051 JGI25164J39214_100005152 251
140 3300003214 JGI25165J46597_1000091 JGI25165J46597_100009152 251
141 3300009011 Ga0105251_10103080 Ga0105251_101030802 251
142 3300025207 Ga0209760_100022 Ga0209760_100022121 251
143 3300025231 Ga0207427_100047 Ga0207427_100047129 251
144 3300025233 Ga0209437_100009 Ga0209437_100009129 251
145 3300025261 Ga0209233_1000032 Ga0209233_1000032129 251
146 3300025711 Ga0207696_1001395 Ga0207696_10013956 251
147 3300046458 Ga0495591_001253 Ga0495591_001253_7988_8953 251
148 3300046530 Ga0495654_0000639 Ga0495654_0000639_580_1446 251
149 3300048905 Ga0496102_0359318 Ga0496102_0359318_163_1128 251
150 3300048917 Ga0496114_0014326 Ga0496114_0014326_4929_5822 251
151 3300048928 Ga0496125_0024015 Ga0496125_0024015_561_1454 251
152 iso_pu_bacteria 2619619299 2621298346 251
153 iso_pu_bacteria 2675903420 2677899883 251
154 iso_pu_bacteria 2738541265 2738671269 251
155 iso_pu_bacteria 2738541282 2738749663 251
156 iso_pu_bacteria 2738541303 2738858703 251
157 iso_pu_bacteria 2765235841 2765582808 251
158 iso_pu_bacteria 2816332298 2817492505 251
159 iso_pu_bacteria 2946027586 2946032104 251
160 iso_pu_bacteria 8054285046 8054285654 251
161 iso_pu_bacteria 8054929484 8054930107 251
162 iso_pu_bacteria 2554235231 2555247916 252
163 3300041405 Ga0439438_004695 Ga0439438_004695_3946_4842 253
164 3300041411 Ga0439466_0007541 Ga0439466_0007541_2285_3160 253
165 3300046513 Ga0495616_0061149 Ga0495616_0061149_446_1408 253
166 3300025728 Ga0207655_1000461 Ga0207655_100046139 254
167 3300048920 Ga0496117_0004263 Ga0496117_0004263_11463_12356 254
168 3300048921 Ga0496118_0003932 Ga0496118_0003932_14679_15572 254
169 3300048925 Ga0496122_0001401 Ga0496122_0001401_7835_8728 254
170 3300048926 Ga0496123_0000437 Ga0496123_0000437_43172_44065 254
171 iso_pu_bacteria 2738543020 2739287770 254
172 iso_pu_bacteria 2738543021 2739293082 254
173 iso_pu_bacteria 2826581358 2826583327 254
174 iso_pu_bacteria 2842815866 2842817349 254
175 iso_pu_bacteria 2842849001 2842850427 254
176 3300013100 Ga0157373_10008944 Ga0157373_100089445 255
177 3300013307 Ga0157372_10102990 Ga0157372_101029903 255
178 3300030731 Ga0316177_1151181 Ga0316177_11511812 255
179 3300042139 Ga0450904_003441 Ga0450904_003441_526_1422 255
180 3300046520 Ga0495637_0042706 Ga0495637_0042706_835_1782 255
181 3300046694 Ga0495649_0092694 Ga0495649_0092694_505_1452 255
182 3300047469 Ga0495673_0104898 Ga0495673_0104898_161_1120 255
183 3300047470 Ga0495681_0002330 Ga0495681_0002330_2335_3324 255
184 3300048905 Ga0496102_0175682 Ga0496102_0175682_137_1075 255
185 3300049459 Ga0495678_000787 Ga0495678_000787_19971_20930 255
186 iso_pu_bacteria 3007803356 3007805751 255
187 iso_pu_bacteria 8056137416 8056141394 255
188 3300046457 Ga0495590_0024898 Ga0495590_0024898_746_1717 256
189 3300046501 Ga0495607_0002661 Ga0495607_0002661_3387_4358 256
190 3300048920 Ga0496117_0101247 Ga0496117_0101247_297_1190 256
191 iso_pu_bacteria 2738543016 2739267525 256
192 3300048925 Ga0496122_0057735 Ga0496122_0057735_1771_2724 257
193 iso_pu_bacteria 2842805378 2842809565 257
194 3300042016 Ga0439463_000685 Ga0439463_000685_6898_7845 258
195 iso_pu_bacteria 2806310737 2807407390 259
196 iso_pu_bacteria 2806310745 2807455718 259
197 iso_pu_bacteria 8056115690 8056119769 259
198 iso_pu_bacteria 8056120720 8056124443 259
199 3300046507 Ga0495606_0000698 Ga0495606_0000698_47383_48420 260
200 3300046675 Ga0495657_0204817 Ga0495657_0204817_167_1120 260
201 3300046794 Ga0495589_0081947 Ga0495589_0081947_164_1111 260
202 3300046809 Ga0495600_0047947 Ga0495600_0047947_745_1698 260
203 3300047320 Ga0495672_0106287 Ga0495672_0106287_405_1358 260
204 3300047444 Ga0495675_0041882 Ga0495675_0041882_1011_1964 260
205 3300009011 Ga0105251_10076646 Ga0105251_100766462 261
206 3300025735 Ga0207713_1027354 Ga0207713_10273544 261
207 3300046692 Ga0495671_0126459 Ga0495671_0126459_116_1039 261
208 3300047471 Ga0495684_0057665 Ga0495684_0057665_1979_2932 262
209 3300048919 Ga0496116_0095300 Ga0496116_0095300_417_1373 262
210 iso_pu_bacteria 3007419365 3007421264 262
211 3300042185 Ga0450909_008018 Ga0450909_008018_576_1454 264
212 3300047323 Ga0495683_0000089 Ga0495683_0000089_18627_19736 264
213 3300048921 Ga0496118_0142593 Ga0496118_0142593_196_1152 264
214 3300049459 Ga0495678_052362 Ga0495678_052362_154_1263 264
215 iso_pu_bacteria 8055878733 8055879009 265
216 iso_pu_bacteria 8056569372 8056573247 267
217 3300006946 Ga0079104_1000545 Ga0079104_100054511 268
218 3300006948 Ga0099826_10002700 Ga0099826_100027006 268
219 3300027111 Ga0209281_1000018 Ga0209281_1000018444 268
220 3300046452 Ga0495617_030161 Ga0495617_030161_712_1671 268
221 3300046460 Ga0495638_0049623 Ga0495638_0049623_1478_2434 268
222 3300046691 Ga0495670_0007226 Ga0495670_0007226_563_1522 268
223 3300047469 Ga0495673_0041114 Ga0495673_0041114_851_1810 268
224 3300047470 Ga0495681_0030038 Ga0495681_0030038_150_1106 268
225 3300048920 Ga0496117_0112635 Ga0496117_0112635_243_1181 268
226 3300048921 Ga0496118_0074062 Ga0496118_0074062_1004_1942 268
227 iso_pu_bacteria 2511231015 2511321317 268
228 iso_pu_bacteria 8056125926 8056130210 268
229 3300046475 Ga0495639_0117219 Ga0495639_0117219_241_1101 269
230 iso_pu_bacteria 2713897148 2715753813 269
231 iso_pu_bacteria 2842832357 2842832714 269
232 iso_pu_bacteria 2842843487 2842848198 269
233 iso_pu_bacteria 2919385768 2919386381 269
234 iso_pu_bacteria 2919487758 2919491335 269
235 iso_pu_bacteria 2974289157 2974292144 269
236 iso_pu_bacteria 2998139840 2998141595 269
237 iso_pu_bacteria 3007395558 3007400806 269
238 iso_pu_bacteria 3007855910 3007856190 269
239 iso_pu_bacteria 3007861166 3007863167 269
240 iso_pu_bacteria 8029995093 8029999155 269
241 iso_pu_bacteria 8056172158 8056175577 269
242 3300046501 Ga0495607_0003469 Ga0495607_0003469_4092_5207 270
243 3300046501 Ga0495607_0110338 Ga0495607_0110338_500_1447 270
244 3300046519 Ga0495632_0040908 Ga0495632_0040908_574_1521 270
245 3300046520 Ga0495637_0036759 Ga0495637_0036759_387_1502 270
246 3300046520 Ga0495637_0052848 Ga0495637_0052848_157_1104 270
247 3300046694 Ga0495649_0077696 Ga0495649_0077696_666_1613 270
248 iso_pu_bacteria 2713897149 2715757682 270
249 iso_pu_bacteria 2818991456 2819654030 270
250 3300046517 Ga0495630_0109395 Ga0495630_0109395_755_1708 271
251 iso_pu_bacteria 2599185160 2599357026 271
252 iso_pu_bacteria 2599185161 2599362187 271
253 iso_pu_bacteria 2599185162 2599368507 271
254 iso_pu_bacteria 2599185163 2599375296 271
255 iso_pu_bacteria 2599185164 2599382131 271
256 iso_pu_bacteria 2599185165 2599388578 271
257 iso_pu_bacteria 2599185166 2599394154 271
258 iso_pu_bacteria 2599185168 2599405919 271
259 iso_pu_bacteria 2599185181 2599464469 271
260 iso_pu_bacteria 2599185182 2599468793 271
261 iso_pu_bacteria 2599185186 2599493492 271
262 iso_pu_bacteria 2599185356 2600216746 271
263 iso_pu_bacteria 2600255313 2601776657 271
264 iso_pu_bacteria 2667528171 2671098826 271
265 iso_pu_bacteria 2818991464 2819703947 271
266 iso_pu_bacteria 2917070673 2917072427 271
267 iso_pu_bacteria 2935353572 2935354591 271
268 iso_pu_bacteria 3007614139 3007617110 271
269 iso_pu_bacteria 637000220 637319014 271
270 3300005288 Ga0065714_10005121 Ga0065714_100051217 272
271 3300017792 Ga0163161_10315586 Ga0163161_103155862 272
272 3300031548 Ga0307408_100158038 Ga0307408_1001580381 272
273 iso_pu_bacteria 2511231011 2511293835 272
274 iso_pu_bacteria 2511231012 2511304855 272
275 iso_pu_bacteria 2511231020 2511351854 272
276 iso_pu_bacteria 2738543004 2739200835 272
277 iso_pu_bacteria 2738543015 2739261086 272
278 iso_pu_bacteria 2904550169 2904553221 272
279 iso_pu_bacteria 2984286254 2984290773 272
280 3300046526 Ga0495666_0081046 Ga0495666_0081046_428_1381 273
281 3300046679 Ga0495623_0068208 Ga0495623_0068208_543_1496 273
282 3300047673 Ga0495593_0056206 Ga0495593_0056206_702_1655 273
283 iso_pu_bacteria 2511231004 2511252473 273
284 iso_pu_bacteria 2511231006 2511263904 273
285 iso_pu_bacteria 2511231007 2511272080 273
286 iso_pu_bacteria 2511231010 2511292534 273
287 iso_pu_bacteria 2511231016 2511329361 273
288 iso_pu_bacteria 2511231018 2511336045 273
289 iso_pu_bacteria 2511231019 2511344269 273
290 iso_pu_bacteria 2597489887 2597856823 273
291 iso_pu_bacteria 2599185185 2599483846 273
292 iso_pu_bacteria 2599185257 2599801492 273
293 iso_pu_bacteria 2600254931 2600365793 273
294 iso_pu_bacteria 2600255318 2601795479 273
295 iso_pu_bacteria 2603880185 2606075548 273
296 iso_pu_bacteria 2603880199 2606128540 273
297 iso_pu_bacteria 2623620443 2624479416 273
298 iso_pu_bacteria 2623620446 2624493594 273
299 iso_pu_bacteria 2671180172 2671768441 273
300 iso_pu_bacteria 2808606382 2808957667 273
301 iso_pu_bacteria 2878029506 2878031419 273
302 iso_pu_bacteria 2919063839 2919064110 273
303 iso_pu_bacteria 2919456309 2919457132 273
304 iso_pu_bacteria 2919697872 2919702894 273
305 iso_pu_bacteria 3007511990 3007512982 273
306 iso_pu_bacteria 3007718800 3007722816 273
307 iso_pu_bacteria 8019775933 8019780225 273
308 iso_pu_bacteria 8056155041 8056156254 273
309 iso_pu_bacteria 8056177738 8056181111 273
310 iso_pu_bacteria 2511231023 2511370061 274
311 iso_pu_bacteria 2511231031 2511416307 274
312 iso_pu_bacteria 2582580891 2583791032 274
313 iso_pu_bacteria 2738543025 2739316042 274
314 iso_pu_bacteria 2740892503 2743736251 274
315 iso_pu_bacteria 2860339153 2860340042 274
316 iso_pu_bacteria 2923153595 2923155265 274
317 iso_pu_bacteria 2931396565 2931400066 274
318 iso_pu_bacteria 2969304461 2969306202 274
319 iso_pu_bacteria 8015687852 8015689486 274
320 iso_pu_bacteria 8019769354 8019774111 274
321 iso_pu_bacteria 8055770955 8055772620 274
322 iso_pu_bacteria 8057798959 8057799047 274
323 iso_pu_bacteria 2511231017 2511333879 275
324 iso_pu_bacteria 2511231021 2511354193 275
325 iso_pu_bacteria 2511231022 2511363661 275
326 iso_pu_bacteria 2599185248 2599770170 275
327 iso_pu_bacteria 2599185289 2599887630 275
328 iso_pu_bacteria 2599185291 2599899891 275
329 iso_pu_bacteria 2599185305 2599960468 275
330 iso_pu_bacteria 2599185306 2599965374 275
331 iso_pu_bacteria 2599185308 2599978487 275
332 iso_pu_bacteria 2599185311 2599995678 275
333 iso_pu_bacteria 2599185313 2600008610 275
334 iso_pu_bacteria 2599185314 2600010606 275
335 iso_pu_bacteria 2599185315 2600017492 275
336 iso_pu_bacteria 2599185316 2600025502 275
337 iso_pu_bacteria 2599185317 2600030386 275
338 iso_pu_bacteria 2599185319 2600041648 275
339 iso_pu_bacteria 2599185321 2600052316 275
340 iso_pu_bacteria 2599185323 2600065112 275
341 iso_pu_bacteria 2599185324 2600073738 275
342 iso_pu_bacteria 2599185325 2600078792 275
343 iso_pu_bacteria 2600254930 2600360818 275
344 iso_pu_bacteria 2643221589 2643952550 275
345 iso_pu_bacteria 2643221602 2644022312 275
346 iso_pu_bacteria 2643221633 2644187176 275
347 iso_pu_bacteria 2667528170 2671090291 275
348 iso_pu_bacteria 2667528176 2671125903 275
349 iso_pu_bacteria 2773857670 2774122854 275
350 iso_pu_bacteria 2784132072 2784315212 275
351 iso_pu_bacteria 2808606377 2808927344 275
352 iso_pu_bacteria 2808606381 2808950117 275
353 iso_pu_bacteria 3007619802 3007622366 275
354 iso_pu_bacteria 2511231008 2511278651 276
355 iso_pu_bacteria 2784132063 2784265679 277
356 iso_pu_bacteria 2852657418 2852658897 277
357 iso_pu_bacteria 2880230671 2880232286 277
358 iso_pu_bacteria 2904518522 2904521820 277
359 3300003791 Ga0055530_10000158 Ga0055530_100001588 278
360 3300003792 Ga0055540_1000182 Ga0055540_10001828 278
361 3300013100 Ga0157373_10005441 Ga0157373_100054416 278
362 3300015261 Ga0182006_1009115 Ga0182006_10091155 278
363 3300025298 Ga0209050_1000009 Ga0209050_1000009252 278
364 3300025303 Ga0209051_1000008 Ga0209051_10000089 278
365 3300025304 Ga0209257_1014823 Ga0209257_10148235 278
366 iso_pu_bacteria 2599185188 2599504070 278
367 iso_pu_bacteria 2599185300 2599932031 278
368 iso_pu_bacteria 2599185302 2599941903 278
369 iso_pu_bacteria 2599185304 2599952577 278
370 iso_pu_bacteria 2599185309 2599982067 278
371 iso_pu_bacteria 2599185310 2599987977 278
372 iso_pu_bacteria 2599185312 2599998133 278
373 iso_pu_bacteria 2599185320 2600046305 278
374 iso_pu_bacteria 2651869719 2652544725 278
375 iso_pu_bacteria 2791355520 2794596308 278
376 iso_pu_bacteria 2808606361 2808856120 278
377 iso_pu_bacteria 2808606376 2808923588 278
378 iso_pu_bacteria 2808606378 2808936129 278
379 iso_pu_bacteria 2808606380 2808945649 278
380 iso_pu_bacteria 2808606383 2808964625 278
381 iso_pu_bacteria 2808606389 2808999513 278
382 iso_pu_bacteria 2913036834 2913038473 278
383 iso_pu_bacteria 2919481497 2919481757 278
384 iso_pu_bacteria 2923586266 2923587406 278
385 iso_pu_bacteria 2931369376 2931370728 278
386 iso_pu_bacteria 2988728565 2988733468 278
387 iso_pu_bacteria 3007866637 3007870432 278
388 iso_pu_bacteria 8056143049 8056147360 278
389 2162886007 SwRhRL2b_contig_1910630 SwRhRL2b_0217.00004170 279
390 3300005288 Ga0065714_10002255 Ga0065714_1000225537 279
391 3300005289 Ga0065704_10070596 Ga0065704_100705965 279
392 iso_pu_bacteria 2599185212 2599615694 279
393 iso_pu_bacteria 2599185318 2600034511 279
394 iso_pu_bacteria 2599185322 2600057681 279
395 iso_pu_bacteria 2643221650 2644281735 279
396 iso_pu_bacteria 2675903515 2678262500 279
397 iso_pu_bacteria 2744054620 2745008843 279
398 iso_pu_bacteria 2825651385 2825653141 279
399 iso_pu_bacteria 2929144301 2929145931 279

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01584

CheW

CheW-like domain

175

310

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ja6-assembly1.cif.gz_F cryo-electron tomography and all-atom molecular dynamics simulations reveal a novel kinase conformational switch in bacterial chemotaxis signaling 0.8011 123 261
3ja6-assembly1.cif.gz_F cryo-electron tomography and all-atom molecular dynamics simulations reveal a novel kinase conformational switch in bacterial chemotaxis signaling 0.7908 123 261
2qdl-assembly1.cif.gz_A crystal structure of scaffolding protein ttchew from thermoanaerobacter tengcongensis 0.7852 124 251
4jpb-assembly1.cif.gz_W the structure of a ternary complex between chea domains p4 and p5 with chew and with an unzipped fragment of tm14, a chemoreceptor analog from thermotoga maritima. 0.7807 123 260
2qdl-assembly2.cif.gz_B crystal structure of scaffolding protein ttchew from thermoanaerobacter tengcongensis 0.7609 124 251
ID Description Score Start End Superfamily
2ch4W02 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);CheA-289, Domain 4 0.6999 147 213 2.40.50.180
2qdlB02 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);CheA-289, Domain 4 0.6515 154 213 2.40.50.180
af_P0A964_36_100_2.40.50.180 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);CheA-289, Domain 4 0.6371 147 212 2.40.50.180
af_P0A964_36_100_2.40.50.180 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);CheA-289, Domain 4 0.5954 147 212 2.40.50.180
2ch4W02 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);CheA-289, Domain 4 0.5705 147 213 2.40.50.180
ID Description Score Start End GO Terms
AF-A0A6N3UR38-F1-model_v4 Chemotaxis protein CheW 0.9227 117 273 GO:0006935
GO:0007165
GO:0016020
AF-A0A3M5E0K1-F1-model_v4 CheW-like domain-containing protein 0.9139 134 271 GO:0006935
GO:0007165
AF-A0A3B8P5A4-F1-model_v4 Chemotaxis protein CheW 0.9066 127 273 GO:0006935
GO:0007165
AF-A0A3B8P5A4-F1-model_v4 Chemotaxis protein CheW 0.9008 127 273 GO:0006935
GO:0007165
AF-A0A3M5E0K1-F1-model_v4 CheW-like domain-containing protein 0.8955 134 271 GO:0006935
GO:0007165

Feature Viewer

pLDDT pTM Quality
65.21 0.57 Medium
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Predicted Structure (AlphaFold2)

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