F429118

General Info

Members Datasets Scaffolds Average Seq Length
381 323 762 399

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2915986958|2915992441
Length 441
Sequence LISLSKIENRISTNPCQESQRPFWAAGILCLIEGGSEMQVGNVTTPFGRRSVTLAQIKGQMRTAEIKAGKSADKWKVFRDACEARAVLGIQDRALAVLDALLTFYPDNELCEERGLVVFPSNDQLSVRAHGIAGTTLRRHLTALVDAGLIQRKDSANGKRYARKDETGAIEEAFGFSLAPLLARAEELAHAAQQVAAERKRFRITKEALSICRRDVRKLISAAMEEGAAGDWGHTEGMFLGLTGRIPRTPTVADLQQILEEMEMLREEIINRLEIQENPEDMDSNAVQNGRHIQNSNTESSNELEPSSGREQGAKSSQAIRRTKEPIKAFPLGMVLQACPGIRDYGPSGNVESWRDLMSAAVVVRSMLGVSPSAYQDACEILGPQNAAAVIACILERAGHIENAGGYLRNLTRKATCGEFSLGPMLMALLRANGAPGRKAA

Samples

Sample ID Description Type Environment
1 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
2 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
3 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
4 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
5 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
6 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
7 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
8 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
9 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
10 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
11 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
12 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
13 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
14 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
15 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
16 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
17 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
18 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
19 3300022739 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - brown nodules Metagenome Nodule
20 3300022740 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - pink nodules Metagenome Nodule
21 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
22 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
23 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
24 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
25 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
26 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
27 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
28 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
29 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
30 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
31 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
33 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
34 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
35 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
36 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
37 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
38 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
39 3300031967 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - elongated nodules Metagenome Nodule
40 3300033430 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - small nodules Metagenome Nodule
41 3300033464 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - branched nodules Metagenome Nodule
42 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
43 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
44 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
45 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
46 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
47 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
48 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
49 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
50 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
51 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
52 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
53 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
54 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
55 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
56 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
57 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
58 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
59 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
60 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
61 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
62 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
63 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
64 2915986958 Sinorhizobium meliloti USDA1659 Isolate Nodule
65 2508501122 Ensifer yinggardensis WSM1721 Isolate Nodule
66 2510917022 Rhizobium sp. AP16 Isolate Rhizosphere
67 2511231052 Sinorhizobium meliloti AK58 Isolate Nodule
68 2512047086 Sinorhizobium arboris LMG 14919 Isolate Nodule
69 2513237086 Sinorhizobium meliloti MVII-I Isolate Nodule
70 2513237093 Rhizobium leguminosarum bv. phaseoli FA23 Isolate Nodule
71 2513237140 Sinorhizobium meliloti GVPV12 Isolate Nodule
72 2513237156 Sinorhizobium medicae WSM1369 Isolate Nodule
73 2513237159 Rhizobium giardinii bv. giardinii H152 Isolate Nodule
74 2515154134 Rhizobium gallicum bv. gallicum R602sp Isolate Nodule
75 2516653085 Rhizobium leguminosarum bv. phaseoli 4292 Isolate Nodule
76 2519899620 Rhizobium sp. Pop5 Isolate Nodule
77 2524023209 Rhizobium leucaenae USDA 9039 Isolate Nodule
78 2551306084 Sinorhizobium meliloti 5A14 Isolate Nodule
79 2551306085 Sinorhizobium meliloti AE608H Isolate Nodule
80 2551306086 Sinorhizobium meliloti AK11 Isolate Nodule
81 2551306087 Sinorhizobium meliloti A0643DD Isolate Nodule
82 2551306090 Sinorhizobium meliloti A0641M Isolate Nodule
83 2551306093 Sinorhizobium meliloti C0438LL Isolate Nodule
84 2554235003 Agrobacterium tumefaciens WRT31 Isolate Rhizosphere
85 2582581304 Rhizobium sp. YR519 Isolate Rhizosphere
86 2582581307 Rhizobium sp. YR060 Isolate Rhizosphere
87 2582581866 Rhizobium sp. CF097 Isolate Rhizosphere
88 2585427531 Agrobacterium rhizogenes YR530 Isolate Rhizosphere
89 2585427608 Agrobacterium rhizogenes OV677 Isolate Rhizosphere
90 2585427609 Agrobacterium rhizogenes CF263 Isolate Rhizosphere
91 2585428125 Agrobacterium rhizogenes CF262 Isolate Rhizosphere
92 2599185156 Rhizobium sp. NFR03 Isolate Rhizoplane
93 2599185210 Rhizobium sp. NFACC06-2 Isolate Rhizoplane
94 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
95 2599185352 Sinorhizobium sp. NFACC03 Isolate Rhizoplane
96 2615840624 Rhizobium aethiopicum HBR26 Isolate Nodule
97 2615840626 Rhizobium lusitanum P1-7 Isolate Nodule
98 2615840698 Rhizobium multihospitium HAMBI 2975 Isolate Nodule
99 2643221557 Ensifer sp. Root558 Isolate Unclassified
100 2643221599 Rhizobium sp. Root708 Isolate Unclassified
101 2643221610 Ensifer sp. Root74 Isolate Unclassified
102 2643221618 Ensifer sp. Root231 Isolate Unclassified
103 2643221626 Ensifer sp. Root31 Isolate Unclassified
104 2643221636 Rhizobium sp. Root1204 Isolate Unclassified
105 2643221637 Rhizobium sp. Root1212 Isolate Unclassified
106 2643221655 Ensifer sp. Root1252 Isolate Unclassified
107 2643221659 Ensifer sp. Root127 Isolate Unclassified
108 2643221668 Ensifer sp. Root423 Isolate Unclassified
109 2643221675 Ensifer sp. Root1298 Isolate Unclassified
110 2643221680 Ensifer sp. Root1312 Isolate Unclassified
111 2643221688 Rhizobium sp. Root482 Isolate Unclassified
112 2643221689 Rhizobium sp. Root483D2 Isolate Unclassified
113 2643221698 Ensifer sp. Root142 Isolate Unclassified
114 2643221712 Ensifer sp. Root258 Isolate Unclassified
115 2643221718 Rhizobium sp. Root268 Isolate Unclassified
116 2643221723 Ensifer sp. Root278 Isolate Unclassified
117 2643221726 Ensifer sp. Root954 Isolate Unclassified
118 2690316117 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
119 2718217882 Rhizobium sp. N741 Isolate Nodule
120 2718217927 Rhizobium sp. N324 Isolate Nodule
121 2718217997 Rhizobium phaseoli sv. phaseoli R723 Isolate Nodule
122 2718218009 Rhizobium sp. N561 Isolate Nodule
123 2718218199 Rhizobium phaseoli sv. phaseoli N261 Isolate Nodule
124 2718218232 Rhizobium phaseoli sv. phaseoli N161 Isolate Nodule
125 2718218269 Rhizobium phaseoli sv. phaseoli N671 Isolate Nodule
126 2718218363 Rhizobium sp. N113 Isolate Nodule
127 2718218365 Rhizobium sp. N731 Isolate Nodule
128 2718218366 Rhizobium sp. N621 Isolate Nodule
129 2721755514 Rhizobium sp. N6212 Isolate Nodule
130 2721755556 Rhizobium phaseoli sv. phaseoli N931 Isolate Nodule
131 2721755684 Rhizobium phaseoli sv. phaseoli N841 Isolate Nodule
132 2721755810 Rhizobium sp. N871 Isolate Nodule
133 2721755819 Rhizobium phaseoli sv. phaseoli N771 Isolate Nodule
134 2721755822 Rhizobium phaseoli sv. phaseoli R650 Isolate Nodule
135 2721755823 Rhizobium phaseoli sv. phaseoli R630 Isolate Nodule
136 2728369352 Rhizobium phaseoli sv. phaseoli N831 Isolate Nodule
137 2728369365 Rhizobium sp. N1341 Isolate Nodule
138 2728369397 Rhizobium sp. N1314 Isolate Nodule
139 2738541333 Rhizobium sophoriradicis CCBAU 03470 Isolate Unclassified
140 2775507266 Rhizobium tropici PRF 81 Isolate Nodule
141 2791355256 Rhizobium sp. M10 Isolate Nodule
142 2791355259 Rhizobium hidalgonense FH14 Isolate Nodule
143 2791355260 Rhizobium sp. L9 Isolate Nodule
144 2791355261 Rhizobium sp. J15 Isolate Nodule
145 2791355262 Rhizobium sp. M1 Isolate Nodule
146 2791355263 Rhizobium chutanense C5 Isolate Nodule
147 2791355264 Rhizobium sp. S9 Isolate Nodule
148 2791355265 Rhizobium sp. H4 Isolate Nodule
149 2791355266 Rhizobium sp. L43 Isolate Nodule
150 2791355267 Rhizobium sp. L18 Isolate Nodule
151 2802428862 Sinorhizobium medicae M7-4 Isolate Nodule
152 2802429605 Rhizobium sophoriradicis L101 Isolate Nodule
153 2802429606 Rhizobium sophoriradicis JJW1 Isolate Nodule
154 2802429633 Rhizobium anhuiense J3 Isolate Nodule
155 2802429635 Rhizobium anhuiense Y27 Isolate Nodule
156 2802429636 Rhizobium anhuiense JX3 Isolate Nodule
157 2838016132 Rhizobium phaseoli SEMIA 4071 Isolate Nodule
158 2838022645 Rhizobium aethiopicum SEMIA 4074 Isolate Nodule
159 2838029111 Rhizobium tropici SEMIA 4079 Isolate Nodule
160 2838048938 Rhizobium pisi 27/80 Isolate Nodule
161 2838061910 Rhizobium phaseoli L15 Isolate Nodule
162 2838668709 Rhizobium sophoriradicis SEMIA 403 Isolate Nodule
163 2838680041 Rhizobium leguminosarum SEMIA 415 Isolate Nodule
164 2838694306 Rhizobium leguminosarum SEMIA 421 Isolate Nodule
165 2838701080 Rhizobium aethiopicum SEMIA 428 Isolate Nodule
166 2838707686 Rhizobium leguminosarum SEMIA 430 Isolate Nodule
167 2838729681 Rhizobium leguminosarum SEMIA 445 Isolate Nodule
168 2838742623 Rhizobium leguminosarum SEMIA 449 Isolate Nodule
169 2841851746 Rhizobium leguminosarum SEMIA 498 Isolate Nodule
170 2841864319 Rhizobium leguminosarum SEMIA 4052 Isolate Nodule
171 2842077413 Rhizobium leguminosarum SEMIA 422 Isolate Nodule
172 2842110456 Rhizobium esperanzae SEMIA 414 Isolate Nodule
173 2842118031 Rhizobium esperanzae SEMIA 420 Isolate Nodule
174 2842146304 Rhizobium sophoriradicis SEMIA 454 Isolate Nodule
175 2842198810 Rhizobium aethiopicum SEMIA 470 Isolate Nodule
176 2842205361 Rhizobium etli SEMIA 471 Isolate Nodule
177 2842217011 Rhizobium leguminosarum SEMIA 475 Isolate Nodule
178 2842229732 Rhizobium leguminosarum SEMIA 481 Isolate Nodule
179 2842237096 Rhizobium leguminosarum SEMIA 482 Isolate Nodule
180 2842243621 Rhizobium leguminosarum SEMIA 483 Isolate Nodule
181 2842250916 Rhizobium etli SEMIA 484 Isolate Nodule
182 2842257432 Rhizobium leguminosarum SEMIA 485 Isolate Nodule
183 2842264693 Rhizobium phaseoli SEMIA 487 Isolate Nodule
184 2842278818 Rhizobium etli SEMIA 489 Isolate Nodule
185 2842285085 Rhizobium lentis SEMIA 490 Isolate Nodule
186 2842291075 Rhizobium leguminosarum SEMIA 491 Isolate Nodule
187 2842298080 Rhizobium leucaenae SEMIA 492 Isolate Nodule
188 2842311132 Rhizobium phaseoli SEMIA 4002 Isolate Nodule
189 2842317721 Rhizobium etli SEMIA 4004 Isolate Nodule
190 2842341865 Rhizobium leguminosarum SEMIA 4011 Isolate Nodule
191 2842357229 Rhizobium leucaenae SEMIA 4015 Isolate Nodule
192 2842363717 Rhizobium leguminosarum SEMIA 4016 Isolate Nodule
193 2842370503 Rhizobium leguminosarum SEMIA 4022 Isolate Nodule
194 2842377471 Rhizobium leguminosarum SEMIA 4024 Isolate Nodule
195 2842384541 Rhizobium leguminosarum SEMIA 4025 Isolate Nodule
196 2842395702 Rhizobium ecuadorense SEMIA 4029 Isolate Nodule
197 2842402390 Rhizobium lentis SEMIA 4033 Isolate Nodule
198 2842409023 Rhizobium lentis SEMIA 4034 Isolate Nodule
199 2842415677 Rhizobium lentis SEMIA 4036 Isolate Nodule
200 2842428310 Rhizobium phaseoli SEMIA 4050 Isolate Nodule
201 2842434925 Rhizobium esperanzae SEMIA 4051 Isolate Nodule
202 2842441272 Rhizobium esperanzae SEMIA 4053 Isolate Nodule
203 2842447887 Rhizobium esperanzae SEMIA 4055 Isolate Nodule
204 2842462802 Rhizobium phaseoli SEMIA 4057 Isolate Nodule
205 2842469257 Rhizobium phaseoli SEMIA 4058 Isolate Nodule
206 2842475841 Rhizobium tropici SEMIA 4059 Isolate Nodule
207 2842482326 Rhizobium lusitanum SEMIA 4060 Isolate Nodule
208 2842489311 Rhizobium sophoriradicis SEMIA 4061 Isolate Nodule
209 2842495871 Rhizobium etli SEMIA 4062 Isolate Nodule
210 2842502639 Rhizobium tropici SEMIA 4063 Isolate Nodule
211 2842509118 Rhizobium paranaense SEMIA 4064 Isolate Nodule
212 2842521101 Rhizobium giardinii SEMIA 4084 Isolate Nodule
213 2844163670 Ensifer sp. 1H6 Isolate Unclassified
214 2847417321 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
215 2850079185 Ensifer aridi JNVU TP6 Isolate Unclassified
216 2852387548 Rhizobium jaguaris CCGE525 Isolate Unclassified
217 2854896431 Neorhizobium alkalisoli DSM 21826 Isolate Unclassified
218 2855839649 Sinorhizobium meliloti AK555 Isolate Unclassified
219 2857516855 Rhizobium sp. R-72456 Isolate Unclassified
220 2896384573 Ensifer sp. MPMI2T Isolate Unclassified
221 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
222 2899845264 Agrobacterium fabacearum CNPSo 675 Isolate Unclassified
223 2913295892 Sinorhizobium kostiensis DSM 13372 Isolate Nodule
224 2916000859 Sinorhizobium meliloti USDA1562 Isolate Nodule
225 2916007675 Sinorhizobium meliloti USDA1289 Isolate Nodule
226 2916014648 Sinorhizobium meliloti USDA1583 Isolate Nodule
227 2916021584 Sinorhizobium meliloti USDA1550 Isolate Nodule
228 2916035215 Sinorhizobium meliloti 3011 Isolate Nodule
229 2916068649 Sinorhizobium meliloti USDA1220 Isolate Nodule
230 2920822456 Ensifer sesbaniae CCBAU 65729 Isolate Unclassified
231 2921237296 Sinorhizobium meliloti USDA1508 Isolate Nodule
232 2924158325 Sinorhizobium meliloti USDA1146 Isolate Nodule
233 2924179722 Sinorhizobium meliloti USDA1280 Isolate Nodule
234 2924186466 Sinorhizobium meliloti USDA1389 Isolate Nodule
235 2924193448 Sinorhizobium meliloti USDA1158 Isolate Nodule
236 2933586486 Rhizobium leguminosarum SEMIA 4039 Isolate Nodule
237 2933594066 Agrobacterium fabrum 35/80 Isolate Nodule
238 2935894831 Rhizobium leguminosarum SEMIA 419 Isolate Nodule
239 2935901341 Rhizobium leguminosarum SEMIA 4082 Isolate Nodule
240 2936381700 Rhizobium chutanense C16 Isolate Unclassified
241 2937002841 Sinorhizobium meliloti USDA1006 Isolate Nodule
242 2937016420 Sinorhizobium meliloti USDA1027 Isolate Nodule
243 2937056579 Sinorhizobium meliloti USDA1357 Isolate Nodule
244 2937063883 Sinorhizobium meliloti USDA1808 Isolate Nodule
245 2937071275 Sinorhizobium meliloti USDA1623 Isolate Nodule
246 2937098957 Sinorhizobium meliloti USDA1519 Isolate Nodule
247 2941499720 Ensifer sp. 4252 Isolate Rhizosphere
248 2957415311 Sinorhizobium meliloti USDA1724 Isolate Nodule
249 2957430029 Sinorhizobium meliloti USDA1590 Isolate Nodule
250 2957443900 Sinorhizobium meliloti USDA1734 Isolate Nodule
251 2957450854 Sinorhizobium meliloti USDA1655 Isolate Nodule
252 2957457609 Sinorhizobium meliloti USDA1751 Isolate Nodule
253 2957491536 Sinorhizobium meliloti USDA1804 Isolate Nodule
254 2957505466 Sinorhizobium meliloti USDA1696 Isolate Nodule
255 2960584000 Sinorhizobium meliloti USDA1530 Isolate Nodule
256 2960597568 Sinorhizobium meliloti 3085 Isolate Nodule
257 2960603979 Sinorhizobium meliloti USDA1580 Isolate Nodule
258 2960617483 Sinorhizobium meliloti USDA1719 Isolate Nodule
259 2960624210 Sinorhizobium meliloti USDA1415 Isolate Nodule
260 2960645483 Sinorhizobium meliloti USDA1703 Isolate Nodule
261 2960660292 Sinorhizobium meliloti USDA1883 Isolate Nodule
262 2960667422 Sinorhizobium meliloti USDA1170 Isolate Nodule
263 2960687367 Sinorhizobium meliloti USDA1462 Isolate Nodule
264 2964607997 Sinorhizobium meliloti USDA1212 Isolate Nodule
265 2964621998 Sinorhizobium meliloti USDA1235 Isolate Nodule
266 2964628898 Sinorhizobium meliloti USDA1191 Isolate Nodule
267 2964643177 Sinorhizobium meliloti USDA1760 Isolate Nodule
268 2964670856 Sinorhizobium meliloti USDA1211 Isolate Nodule
269 2964678106 Sinorhizobium meliloti USDA1210 Isolate Nodule
270 2964685014 Sinorhizobium meliloti USDA1232 Isolate Nodule
271 2964712639 Sinorhizobium meliloti USDA1616 Isolate Nodule
272 2967671571 Sinorhizobium meliloti USDA1496 Isolate Nodule
273 2967678726 Sinorhizobium meliloti USDA1467 Isolate Nodule
274 2967693043 Sinorhizobium meliloti USDA1183 Isolate Nodule
275 2967714385 Sinorhizobium meliloti USDA1023 Isolate Nodule
276 2967721400 Sinorhizobium meliloti USDA1742 Isolate Nodule
277 2967735183 Sinorhizobium meliloti USDA1710 Isolate Nodule
278 2967742019 Sinorhizobium meliloti USDA1676 Isolate Nodule
279 2970019648 Sinorhizobium meliloti USDA1603 Isolate Nodule
280 2970026789 Sinorhizobium medicae USDA1611 Isolate Nodule
281 2970033650 Sinorhizobium meliloti USDA1565 Isolate Nodule
282 2970047711 Sinorhizobium meliloti USDA1793 Isolate Nodule
283 2970061556 Sinorhizobium meliloti USDA1810 Isolate Nodule
284 2970068827 Sinorhizobium meliloti USDA1227 Isolate Nodule
285 2970076120 Sinorhizobium meliloti USDA1706 Isolate Nodule
286 2970088815 Sinorhizobium meliloti USDA1819 Isolate Nodule
287 2970095765 Sinorhizobium meliloti USDA1225 Isolate Nodule
288 2970109326 Sinorhizobium meliloti USDA1186 Isolate Nodule
289 2970129317 Sinorhizobium meliloti USDA1008 Isolate Nodule
290 2970149975 Sinorhizobium meliloti USDA1215 Isolate Nodule
291 2970156795 Sinorhizobium meliloti USDA1491 Isolate Nodule
292 2970170962 Sinorhizobium meliloti USDA1571 Isolate Nodule
293 2970177841 Sinorhizobium meliloti USDA1533 Isolate Nodule
294 2970191845 Sinorhizobium meliloti USDA1187 Isolate Nodule
295 2977516862 Sinorhizobium meliloti USDA1791 Isolate Nodule
296 2977537788 Sinorhizobium meliloti USDA1184 Isolate Nodule
297 2977551784 Sinorhizobium meliloti USDA1035 Isolate Nodule
298 2977558990 Sinorhizobium meliloti USDA1222 Isolate Nodule
299 2979089926 Agrobacterium sp. SORGH_AS 745 Isolate Unclassified
300 2979095461 Agrobacterium tumefaciens SORGH_AS 749 Isolate Unclassified
301 2989349275 Shinella kummerowiae CCBAU 25048 Isolate Unclassified
302 2996887358 Rhizobium sp. R711 Isolate Nodule
303 3005409236 Rhizobium sp. P32RR-XVIII Isolate Rhizosphere
304 3005452660 Rhizobium grahamii BG7 Isolate Unclassified
305 639633055 Rhizobium leguminosarum bv. viciae 3841 Isolate Unclassified
306 8005275841 Rhizobium sp. N4311 Isolate Nodule
307 8005282627 Rhizobium phaseoli NC1 Isolate Nodule
308 8005307578 Rhizobium leguminosarum bv. phaseoli LCS0306 Isolate Unclassified
309 8005321885 Rhizobium sp. R72 Isolate Nodule
310 8005430974 Rhizobium phaseoli Y20 Isolate Nodule
311 8005619151 Rhizobium phaseoli CCGM2 Isolate Unclassified
312 8005626139 Rhizobium phaseoli Y18 Isolate Nodule
313 8005658619 Rhizobium terrae CC-HIH110 Isolate Unclassified
314 8005668836 Rhizobium phaseoli CCGM9 Isolate Unclassified
315 8005695170 Rhizobium sp. RMa-01 Isolate Unclassified
316 8018127388 Rhizobium aegyptiacum 950 Isolate Nodule
317 8018163183 Rhizobium sp. WYCCWR 11146 Isolate Nodule
318 8018176218 Rhizobium sp. N122 Isolate Nodule
319 8024501048 Rhizobium sp. H4 Isolate Nodule
320 8054558443 Rhizobium alarense TRM95111 Isolate Nodule
321 8055431914 Allorhizobium sonneratiae BGMRC 0089 Isolate Unclassified
322 8056375014 Rhizobium redzepovicii 18T Isolate Nodule
323 8056382006 Rhizobium croatiense 13T Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 24.41
Metatranscriptomes 0
Isolates 75.59

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.02
Nodule 63.78
Rhizoplane 1.05
Rhizosphere 7.87
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25158J39367_1000775 3300002739 Bacteria 6116
2 JGI25159J45721_1000728 3300002987 Bacteria 14377
3 JGI25160J50197_1000201 3300003354 Bacteria 49632
4 JGI25161J50226_1004229 3300003374 Bacteria 3051
5 Ga0055526_1001150 3300003771 Bacteria 19182
6 Ga0055524_1000238 3300003775 Bacteria 57872
7 Ga0055536_1008441 3300003781 Bacteria 4423
8 Ga0055528_1000039 3300003790 Bacteria 112899
9 Ga0055530_10018773 3300003791 Bacteria 2118
10 Ga0055531_10000677 3300003794 Bacteria 29093
11 Ga0055531_10014932 3300003794 Bacteria 3463
12 Ga0055543_1000243 3300004625 Bacteria 41955
13 Ga0065165_1000663 3300005262 Bacteria 49670
14 Ga0070665_100050736 3300005548 Bacteria 4164
15 Ga0075365_10011184 3300006038 Bacteria 5268
16 Ga0075370_10072528 3300006353 Bacteria 1971
17 Ga0099826_10000032 3300006948 Bacteria 122288
18 Ga0099826_10006465 3300006948 Bacteria 8543
19 Ga0099826_10022445 3300006948 Bacteria 4716
20 Ga0105239_10000065 3300010375 Bacteria 151224
21 Ga0157369_10192126 3300013105 Bacteria 2145
22 Ga0228711_1003907 3300022739 Bacteria 23140
23 Ga0228711_1009923 3300022739 Bacteria 12713
24 Ga0228711_1022573 3300022739 Bacteria 4892
25 Ga0228710_1004297 3300022740 Bacteria 22520
26 Ga0228710_1022407 3300022740 Bacteria 4862
27 Ga0209436_100079 3300025208 Bacteria 48884
28 Ga0209646_1003751 3300025246 Bacteria 2918
29 Ga0209673_1000161 3300025273 Bacteria 142073
30 Ga0209130_1000115 3300025284 Bacteria 129623
31 Ga0209025_1000532 3300025294 Bacteria 72555
32 Ga0209025_1004379 3300025294 Bacteria 12295
33 Ga0209025_1032852 3300025294 Bacteria 2415
34 Ga0209564_1000450 3300025295 Bacteria 69909
35 Ga0209758_1000168 3300025297 Bacteria 150965
36 Ga0209758_1006462 3300025297 Bacteria 8406
37 Ga0209050_1016649 3300025298 Bacteria 2990
38 Ga0209256_1000175 3300025299 Bacteria 127671
39 Ga0209256_1001076 3300025299 Bacteria 31547
40 Ga0207426_1000226 3300025302 Bacteria 129623
41 Ga0207426_1000283 3300025302 Bacteria 103487
42 Ga0209051_1009491 3300025303 Bacteria 5010
43 Ga0209257_1000928 3300025304 Bacteria 40585
44 Ga0209257_1002393 3300025304 Bacteria 18775
45 Ga0209257_1013798 3300025304 Bacteria 3545
46 Ga0209281_1002289 3300027111 Bacteria 8052
47 Ga0209281_1004894 3300027111 Bacteria 3866
48 Ga0209282_1000177 3300027666 Bacteria 35170
49 Ga0209282_1000586 3300027666 Bacteria 17834
50 Ga0307515_10015613 3300028794 Bacteria 13977
51 Ga0307515_10058543 3300028794 Bacteria 5547
52 Ga0307513_10009275 3300031456 Bacteria 12458
53 Ga0307513_10014116 3300031456 Bacteria 9776
54 Ga0307405_10051529 3300031731 Bacteria 2554
55 Ga0307406_10066808 3300031901 Bacteria 2342
56 Ga0315914_1003640 3300031967 Bacteria 23373
57 Ga0315914_1019418 3300031967 Bacteria 5829
58 Ga0315913_1003595 3300033430 Bacteria 18647
59 Ga0315913_1021542 3300033430 Bacteria 5829
60 Ga0315915_1003681 3300033464 Bacteria 19414
61 Ga0315915_1015398 3300033464 Bacteria 7403
62 Ga0439436_0001585 3300041404 Bacteria 6619
63 Ga0439436_0012856 3300041404 Bacteria 2537
64 Ga0439439_0003688 3300041406 Bacteria 3395
65 Ga0439465_0001551 3300041413 Bacteria 7473
66 Ga0439465_0003758 3300041413 Bacteria 4951
67 Ga0439465_0013231 3300041413 Bacteria 2576
68 Ga0439465_0046141 3300041413 Bacteria 1418
69 Ga0439449_0006645 3300042007 Bacteria 4422
70 Ga0439462_0007466 3300042015 Bacteria 2737
71 Ga0495607_0019629 3300046501 Bacteria 4290
72 Ga0495632_0000386 3300046519 Bacteria 42002
73 Ga0495643_0013271 3300046522 Bacteria 4937
74 Ga0495686_0048955 3300047472 Bacteria 2662
75 Ga0496117_0074023 3300048920 Bacteria 2270
76 Ga0496121_0000340 3300048924 Bacteria 97336
77 Ga0496121_0008825 3300048924 Bacteria 11740
78 Ga0496122_0001241 3300048925 Bacteria 43048
79 Ga0496122_0117454 3300048925 Bacteria 1727
80 Ga0496123_0009102 3300048926 Bacteria 8989
81 Ga0496123_0028850 3300048926 Bacteria 4099
82 Ga0496125_0004668 3300048928 Bacteria 15623
83 Ga0496126_0010502 3300048929 Bacteria 9698
84 Ga0496126_0062390 3300048929 Bacteria 3344
85 nmdc:mga0yw44_228_c1 3300050492 Bacteria 19215
86 Ga0500618_000097 3300053125 Bacteria 71932
87 Ga0500618_000318 3300053125 Bacteria 35515
88 Ga0500568_0036127 3300053139 Bacteria 2012
89 Ga0500573_0000174 3300053140 Bacteria 26069
90 Ga0500573_0013479 3300053140 Bacteria 4607
91 Ga0500616_0000438 3300053153 Bacteria 55072
92 Ga0500634_0004190 3300053161 Bacteria 6613
93 Ga0500636_0000096 3300053177 Bacteria 44837
94 2915992441 2915986958 Bacteria 6739310
95 2509110095 2508501122 Bacteria 6292184
96 2511131299 2510917022 Bacteria 6504556
97 2511503307 2511231052 Bacteria 6974333
98 2512528712 2512047086 Bacteria 6850303
99 2513585583 2513237086 Bacteria 7265287
100 2513636205 2513237093 Bacteria 7545552
101 2513886408 2513237140 Bacteria 7076289
102 2513989151 2513237156 Bacteria 6402557
103 2513989187 2513237156 Bacteria 6402557
104 2514001226 2513237159 Bacteria 6810126
105 2514001415 2513237159 Bacteria 6810126
106 2515744657 2515154134 Bacteria 7220242
107 2517081726 2516653085 Bacteria 7346596
108 2520381773 2519899620 Bacteria 6499161
109 2524462881 2524023209 Bacteria 6679728
110 2551674120 2551306084 Bacteria 8942552
111 2551681254 2551306084 Bacteria 8942552
112 2551685385 2551306085 Bacteria 7347181
113 2551692179 2551306086 Bacteria 6843938
114 2551699997 2551306087 Bacteria 7351905
115 2551721525 2551306090 Bacteria 7953713
116 2551740459 2551306093 Bacteria 7064773
117 2554249763 2554235003 Bacteria 5877155
118 2585258716 2582581304 Bacteria 5831370
119 2585274489 2582581307 Bacteria 6597605
120 2585394906 2582581866 Bacteria 6859583
121 2585561848 2585427531 Bacteria 6992870
122 2585900208 2585427608 Bacteria 6544331
123 2585907580 2585427609 Bacteria 6667127
124 2587983001 2585428125 Bacteria 6662905
125 2599336139 2599185156 Bacteria 5403036
126 2599606003 2599185210 Bacteria 5624189
127 2599723009 2599185236 Bacteria 6875203
128 2600197022 2599185352 Bacteria 7228948
129 2616297377 2615840624 Bacteria 6557588
130 2616311756 2615840626 Bacteria 7921970
131 2616551467 2615840698 Bacteria 7319877
132 2643806724 2643221557 Bacteria 7184309
133 2644003632 2643221599 Bacteria 6292121
134 2644066777 2643221610 Bacteria 7480339
135 2644108269 2643221618 Bacteria 7717186
136 2644145804 2643221626 Bacteria 8069654
137 2644200543 2643221636 Bacteria 6583769
138 2644207511 2643221637 Bacteria 5345260
139 2644307282 2643221655 Bacteria 7722067
140 2644331298 2643221659 Bacteria 7890716
141 2644381225 2643221668 Bacteria 7306521
142 2644417723 2643221675 Bacteria 7473456
143 2644450999 2643221680 Bacteria 7473610
144 2644492837 2643221688 Bacteria 5260751
145 2644498272 2643221689 Bacteria 6042950
146 2644501116 2643221689 Bacteria 6042950
147 2644541313 2643221698 Bacteria 7756764
148 2644613371 2643221712 Bacteria 7729434
149 2644651260 2643221718 Bacteria 5345506
150 2644674454 2643221723 Bacteria 7095460
151 2644691782 2643221726 Bacteria 7455827
152 2692320360 2690316117 Bacteria 6800650
153 2719179181 2718217882 Bacteria 6556348
154 2719383753 2718217927 Bacteria 6972593
155 2719663548 2718217997 Bacteria 6740740
156 2719729545 2718218009 Bacteria 6478651
157 2720488952 2718218199 Bacteria 6740745
158 2720615980 2718218232 Bacteria 6720332
159 2720777909 2718218269 Bacteria 6906114
160 2721143795 2718218363 Bacteria 6524337
161 2721155543 2718218365 Bacteria 6274507
162 2721166891 2718218366 Bacteria 6425255
163 2722837869 2721755514 Bacteria 6424414
164 2723031352 2721755556 Bacteria 6745503
165 2723563962 2721755684 Bacteria 6859907
166 2724041438 2721755810 Bacteria 6479005
167 2724087651 2721755819 Bacteria 6906405
168 2724102383 2721755822 Bacteria 6726041
169 2724107567 2721755823 Bacteria 6752556
170 2730105044 2728369352 Bacteria 6745171
171 2730161642 2728369365 Bacteria 6555560
172 2730296423 2728369397 Bacteria 6274511
173 2739037599 2738541333 Bacteria 7106503
174 2778176778 2775507266 Bacteria 7392367
175 2778179981 2775507266 Bacteria 7392367
176 2778180287 2775507266 Bacteria 7392367
177 2793298081 2791355256 Bacteria 6798008
178 2793299814 2791355256 Bacteria 6798008
179 2793318955 2791355259 Bacteria 7254731
180 2793324691 2791355260 Bacteria 6598818
181 2793330793 2791355261 Bacteria 6661293
182 2793338019 2791355262 Bacteria 6774204
183 2793344880 2791355263 Bacteria 6872478
184 2793351149 2791355264 Bacteria 6429314
185 2793356411 2791355265 Bacteria 6539969
186 2793364271 2791355266 Bacteria 7116587
187 2793370138 2791355267 Bacteria 7222458
188 2802747808 2802428862 Bacteria 6633353
189 2805931901 2802429605 Bacteria 6875453
190 2805937716 2802429606 Bacteria 6346811
191 2806048686 2802429633 Bacteria 7341974
192 2806063089 2802429635 Bacteria 7650140
193 2806070377 2802429636 Bacteria 7597525
194 2838021330 2838016132 Bacteria 6577831
195 2838026071 2838022645 Bacteria 6494267
196 2838034530 2838029111 Bacteria 6603031
197 2838054749 2838048938 Bacteria 6044578
198 2838068382 2838061910 Bacteria 6794874
199 2838675090 2838668709 Bacteria 6671819
200 2838685860 2838680041 Bacteria 6545511
201 2838699370 2838694306 Bacteria 6853137
202 2838700853 2838694306 Bacteria 6853137
203 2838707427 2838701080 Bacteria 6669771
204 2838712851 2838707686 Bacteria 6619912
205 2838736786 2838729681 Bacteria 7400765
206 2838749624 2838742623 Bacteria 7396178
207 2841856634 2841851746 Bacteria 7532261
208 2841870165 2841864319 Bacteria 6742987
209 2842082496 2842077413 Bacteria 6508645
210 2842083533 2842077413 Bacteria 6508645
211 2842117887 2842110456 Bacteria 7656360
212 2842117974 2842110456 Bacteria 7656360
213 2842123369 2842118031 Bacteria 7033875
214 2842124503 2842118031 Bacteria 7033875
215 2842152019 2842146304 Bacteria 5957337
216 2842202702 2842198810 Bacteria 6608673
217 2842204142 2842198810 Bacteria 6608673
218 2842211379 2842205361 Bacteria 6340321
219 2842224228 2842217011 Bacteria 7497767
220 2842236936 2842229732 Bacteria 7475766
221 2842242453 2842237096 Bacteria 6620661
222 2842250584 2842243621 Bacteria 7421798
223 2842257258 2842250916 Bacteria 6579627
224 2842264468 2842257432 Bacteria 7401195
225 2842270730 2842264693 Bacteria 6472963
226 2842284833 2842278818 Bacteria 6340002
227 2842290211 2842285085 Bacteria 6011953
228 2842296520 2842291075 Bacteria 7076806
229 2842297774 2842291075 Bacteria 7076806
230 2842302325 2842298080 Bacteria 6123127
231 2842316361 2842311132 Bacteria 6616990
232 2842323297 2842317721 Bacteria 6793725
233 2842348671 2842341865 Bacteria 7003929
234 2842363303 2842357229 Bacteria 6485165
235 2842370368 2842363717 Bacteria 6844742
236 2842375469 2842370503 Bacteria 7038661
237 2842377046 2842370503 Bacteria 7038661
238 2842382803 2842377471 Bacteria 7140707
239 2842384186 2842377471 Bacteria 7140707
240 2842389482 2842384541 Bacteria 7057858
241 2842391327 2842384541 Bacteria 7057858
242 2842401495 2842395702 Bacteria 6780583
243 2842407945 2842402390 Bacteria 6681310
244 2842414643 2842409023 Bacteria 6687331
245 2842421032 2842415677 Bacteria 6596907
246 2842434600 2842428310 Bacteria 6767288
247 2842440971 2842434925 Bacteria 6502746
248 2842447588 2842441272 Bacteria 6769273
249 2842453706 2842447887 Bacteria 6754142
250 2842468961 2842462802 Bacteria 6588055
251 2842475662 2842469257 Bacteria 6752936
252 2842481277 2842475841 Bacteria 6603183
253 2842488235 2842482326 Bacteria 7212537
254 2842488544 2842482326 Bacteria 7212537
255 2842495443 2842489311 Bacteria 6620893
256 2842501722 2842495871 Bacteria 6820686
257 2842508138 2842502639 Bacteria 6604161
258 2842513981 2842509118 Bacteria 6850950
259 2842514803 2842509118 Bacteria 6850950
260 2842526794 2842521101 Bacteria 6569494
261 2842526955 2842521101 Bacteria 6569494
262 2844164527 2844163670 Bacteria 7266046
263 2844168978 2844163670 Bacteria 7266046
264 2847423959 2847417321 Bacteria 6913799
265 2850083662 2850079185 Bacteria 6848280
266 2852392389 2852387548 Bacteria 8025568
267 2854898908 2854896431 Bacteria 5869725
268 2855846576 2855839649 Bacteria 7135830
269 2857522877 2857516855 Bacteria 7787325
270 2896389802 2896384573 Bacteria 7700774
271 2899804838 2899803654 Bacteria 5577784
272 2899848127 2899845264 Bacteria 5672268
273 2913301144 2913295892 Bacteria 6333755
274 2916004999 2916000859 Bacteria 6865702
275 2916012667 2916007675 Bacteria 6898660
276 2916021470 2916014648 Bacteria 6946486
277 2916022621 2916021584 Bacteria 6854472
278 2916040086 2916035215 Bacteria 6755766
279 2916074425 2916068649 Bacteria 6943657
280 2920828800 2920822456 Bacteria 6897201
281 2921242535 2921237296 Bacteria 6876710
282 2924164323 2924158325 Bacteria 7188855
283 2924183942 2924179722 Bacteria 6843264
284 2924191464 2924186466 Bacteria 6876637
285 2924198206 2924193448 Bacteria 6955718
286 2933593927 2933586486 Bacteria 7667493
287 2933593956 2933586486 Bacteria 7667493
288 2933599328 2933594066 Bacteria 5594265
289 2935899413 2935894831 Bacteria 6620579
290 2935908476 2935901341 Bacteria 7341747
291 2936385552 2936381700 Bacteria 7006523
292 2937009097 2937002841 Bacteria 6934057
293 2937022146 2937016420 Bacteria 6782579
294 2937058597 2937056579 Bacteria 7107896
295 2937064686 2937063883 Bacteria 7199456
296 2937072634 2937071275 Bacteria 6984483
297 2937100684 2937098957 Bacteria 7249374
298 2941502792 2941499720 Bacteria 7599444
299 2941506863 2941499720 Bacteria 7599444
300 2957419273 2957415311 Bacteria 6991633
301 2957430671 2957430029 Bacteria 7022557
302 2957448989 2957443900 Bacteria 6869977
303 2957453946 2957450854 Bacteria 6765715
304 2957461129 2957457609 Bacteria 6967680
305 2957495615 2957491536 Bacteria 6695180
306 2957507122 2957505466 Bacteria 7253085
307 2960586247 2960584000 Bacteria 6864594
308 2960599091 2960597568 Bacteria 6550735
309 2960608399 2960603979 Bacteria 6898737
310 2960621365 2960617483 Bacteria 6727748
311 2960625356 2960624210 Bacteria 6875384
312 2960647074 2960645483 Bacteria 7211087
313 2960663366 2960660292 Bacteria 7041660
314 2960665609 2960660292 Bacteria 7041660
315 2960673489 2960667422 Bacteria 6763020
316 2960688278 2960687367 Bacteria 6535474
317 2964608764 2964607997 Bacteria 7101408
318 2964628455 2964621998 Bacteria 6834995
319 2964635266 2964628898 Bacteria 7083044
320 2964646087 2964643177 Bacteria 6820887
321 2964676510 2964670856 Bacteria 6851364
322 2964679205 2964678106 Bacteria 6792020
323 2964691392 2964685014 Bacteria 6839111
324 2964714450 2964712639 Bacteria 6695970
325 2967675681 2967671571 Bacteria 7021409
326 2967685332 2967678726 Bacteria 7264382
327 2967698169 2967693043 Bacteria 6804451
328 2967720075 2967714385 Bacteria 7000047
329 2967725066 2967721400 Bacteria 7073753
330 2967735740 2967735183 Bacteria 6827012
331 2967737032 2967735183 Bacteria 6827012
332 2967747950 2967742019 Bacteria 6794534
333 2970024364 2970019648 Bacteria 7072033
334 2970027228 2970026789 Bacteria 6785236
335 2970040491 2970033650 Bacteria 7118744
336 2970049477 2970047711 Bacteria 7088379
337 2970050062 2970047711 Bacteria 7088379
338 2970067345 2970061556 Bacteria 7099761
339 2970076050 2970068827 Bacteria 7123112
340 2970081273 2970076120 Bacteria 6697332
341 2970090380 2970088815 Bacteria 6933825
342 2970100247 2970095765 Bacteria 6936963
343 2970114215 2970109326 Bacteria 6863976
344 2970134174 2970129317 Bacteria 6806560
345 2970150495 2970149975 Bacteria 6779706
346 2970157122 2970156795 Bacteria 7168044
347 2970158765 2970156795 Bacteria 7168044
348 2970174921 2970170962 Bacteria 6876229
349 2970183479 2970177841 Bacteria 6768001
350 2970192552 2970191845 Bacteria 7032787
351 2977518276 2977516862 Bacteria 6940108
352 2977540433 2977537788 Bacteria 6929320
353 2977557881 2977551784 Bacteria 7125765
354 2977565467 2977558990 Bacteria 6863948
355 2979091945 2979089926 Bacteria 5670289
356 2979100968 2979095461 Bacteria 5669583
357 2989350298 2989349275 Bacteria 6349068
358 2996889803 2996887358 Bacteria 5795980
359 3005410095 3005409236 Bacteria 7188837
360 3005458344 3005452660 Bacteria 5889319
361 639651142 639633055 Bacteria 7751309
362 8005276963 8005275841 Bacteria 6929066
363 8005284947 8005282627 Bacteria 6675747
364 8005312222 8005307578 Bacteria 7395396
365 8005324330 8005321885 Bacteria 5795980
366 8005436503 8005430974 Bacteria 6689030
367 8005624875 8005619151 Bacteria 7030230
368 8005627313 8005626139 Bacteria 6534237
369 8005661057 8005658619 Bacteria 4500593
370 8005662174 8005658619 Bacteria 4500593
371 8005674525 8005668836 Bacteria 6953162
372 8005699054 8005695170 Bacteria 6912330
373 8018130290 8018127388 Bacteria 7351159
374 8018134482 8018127388 Bacteria 7351159
375 8018169606 8018163183 Bacteria 7277977
376 8018180594 8018176218 Bacteria 6896178
377 8024504121 8024501048 Bacteria 6427847
378 8054560464 8054558443 Bacteria 5204801
379 8055433345 8055431914 Bacteria 4551896
380 8056379780 8056375014 Bacteria 7006639
381 8056386419 8056382006 Bacteria 6408074
382 JGI25158J39367_1000775
383 JGI25159J45721_1000728
384 JGI25160J50197_1000201
385 JGI25161J50226_1004229
386 Ga0055526_1001150
387 Ga0055524_1000238
388 Ga0055536_1008441
389 Ga0055528_1000039
390 Ga0055530_10018773
391 Ga0055531_10000677
392 Ga0055531_10014932
393 Ga0055543_1000243
394 Ga0065165_1000663
395 Ga0070665_100050736
396 Ga0075365_10011184
397 Ga0075370_10072528
398 Ga0099826_10000032
399 Ga0099826_10006465
400 Ga0099826_10022445
401 Ga0105239_10000065
402 Ga0157369_10192126
403 Ga0228711_1003907
404 Ga0228711_1009923
405 Ga0228711_1022573
406 Ga0228710_1004297
407 Ga0228710_1022407
408 Ga0209436_100079
409 Ga0209646_1003751
410 Ga0209673_1000161
411 Ga0209130_1000115
412 Ga0209025_1000532
413 Ga0209025_1004379
414 Ga0209025_1032852
415 Ga0209564_1000450
416 Ga0209758_1000168
417 Ga0209758_1006462
418 Ga0209050_1016649
419 Ga0209256_1000175
420 Ga0209256_1001076
421 Ga0207426_1000226
422 Ga0207426_1000283
423 Ga0209051_1009491
424 Ga0209257_1000928
425 Ga0209257_1002393
426 Ga0209257_1013798
427 Ga0209281_1002289
428 Ga0209281_1004894
429 Ga0209282_1000177
430 Ga0209282_1000586
431 Ga0307515_10015613
432 Ga0307515_10058543
433 Ga0307513_10009275
434 Ga0307513_10014116
435 Ga0307405_10051529
436 Ga0307406_10066808
437 Ga0315914_1003640
438 Ga0315914_1019418
439 Ga0315913_1003595
440 Ga0315913_1021542
441 Ga0315915_1003681
442 Ga0315915_1015398
443 Ga0439436_0001585
444 Ga0439436_0012856
445 Ga0439439_0003688
446 Ga0439465_0001551
447 Ga0439465_0003758
448 Ga0439465_0013231
449 Ga0439465_0046141
450 Ga0439449_0006645
451 Ga0439462_0007466
452 Ga0495607_0019629
453 Ga0495632_0000386
454 Ga0495643_0013271
455 Ga0495686_0048955
456 Ga0496117_0074023
457 Ga0496121_0000340
458 Ga0496121_0008825
459 Ga0496122_0001241
460 Ga0496122_0117454
461 Ga0496123_0009102
462 Ga0496123_0028850
463 Ga0496125_0004668
464 Ga0496126_0010502
465 Ga0496126_0062390
466 nmdc:mga0yw44_228_c1
467 Ga0500618_000097
468 Ga0500618_000318
469 Ga0500568_0036127
470 Ga0500573_0000174
471 Ga0500573_0013479
472 Ga0500616_0000438
473 Ga0500634_0004190
474 Ga0500636_0000096
475 2915992441
476 2509110095
477 2511131299
478 2511503307
479 2512528712
480 2513585583
481 2513636205
482 2513886408
483 2513989151
484 2513989187
485 2514001226
486 2514001415
487 2515744657
488 2517081726
489 2520381773
490 2524462881
491 2551674120
492 2551681254
493 2551685385
494 2551692179
495 2551699997
496 2551721525
497 2551740459
498 2554249763
499 2585258716
500 2585274489
501 2585394906
502 2585561848
503 2585900208
504 2585907580
505 2587983001
506 2599336139
507 2599606003
508 2599723009
509 2600197022
510 2616297377
511 2616311756
512 2616551467
513 2643806724
514 2644003632
515 2644066777
516 2644108269
517 2644145804
518 2644200543
519 2644207511
520 2644307282
521 2644331298
522 2644381225
523 2644417723
524 2644450999
525 2644492837
526 2644498272
527 2644501116
528 2644541313
529 2644613371
530 2644651260
531 2644674454
532 2644691782
533 2692320360
534 2719179181
535 2719383753
536 2719663548
537 2719729545
538 2720488952
539 2720615980
540 2720777909
541 2721143795
542 2721155543
543 2721166891
544 2722837869
545 2723031352
546 2723563962
547 2724041438
548 2724087651
549 2724102383
550 2724107567
551 2730105044
552 2730161642
553 2730296423
554 2739037599
555 2778176778
556 2778179981
557 2778180287
558 2793298081
559 2793299814
560 2793318955
561 2793324691
562 2793330793
563 2793338019
564 2793344880
565 2793351149
566 2793356411
567 2793364271
568 2793370138
569 2802747808
570 2805931901
571 2805937716
572 2806048686
573 2806063089
574 2806070377
575 2838021330
576 2838026071
577 2838034530
578 2838054749
579 2838068382
580 2838675090
581 2838685860
582 2838699370
583 2838700853
584 2838707427
585 2838712851
586 2838736786
587 2838749624
588 2841856634
589 2841870165
590 2842082496
591 2842083533
592 2842117887
593 2842117974
594 2842123369
595 2842124503
596 2842152019
597 2842202702
598 2842204142
599 2842211379
600 2842224228
601 2842236936
602 2842242453
603 2842250584
604 2842257258
605 2842264468
606 2842270730
607 2842284833
608 2842290211
609 2842296520
610 2842297774
611 2842302325
612 2842316361
613 2842323297
614 2842348671
615 2842363303
616 2842370368
617 2842375469
618 2842377046
619 2842382803
620 2842384186
621 2842389482
622 2842391327
623 2842401495
624 2842407945
625 2842414643
626 2842421032
627 2842434600
628 2842440971
629 2842447588
630 2842453706
631 2842468961
632 2842475662
633 2842481277
634 2842488235
635 2842488544
636 2842495443
637 2842501722
638 2842508138
639 2842513981
640 2842514803
641 2842526794
642 2842526955
643 2844164527
644 2844168978
645 2847423959
646 2850083662
647 2852392389
648 2854898908
649 2855846576
650 2857522877
651 2896389802
652 2899804838
653 2899848127
654 2913301144
655 2916004999
656 2916012667
657 2916021470
658 2916022621
659 2916040086
660 2916074425
661 2920828800
662 2921242535
663 2924164323
664 2924183942
665 2924191464
666 2924198206
667 2933593927
668 2933593956
669 2933599328
670 2935899413
671 2935908476
672 2936385552
673 2937009097
674 2937022146
675 2937058597
676 2937064686
677 2937072634
678 2937100684
679 2941502792
680 2941506863
681 2957419273
682 2957430671
683 2957448989
684 2957453946
685 2957461129
686 2957495615
687 2957507122
688 2960586247
689 2960599091
690 2960608399
691 2960621365
692 2960625356
693 2960647074
694 2960663366
695 2960665609
696 2960673489
697 2960688278
698 2964608764
699 2964628455
700 2964635266
701 2964646087
702 2964676510
703 2964679205
704 2964691392
705 2964714450
706 2967675681
707 2967685332
708 2967698169
709 2967720075
710 2967725066
711 2967735740
712 2967737032
713 2967747950
714 2970024364
715 2970027228
716 2970040491
717 2970049477
718 2970050062
719 2970067345
720 2970076050
721 2970081273
722 2970090380
723 2970100247
724 2970114215
725 2970134174
726 2970150495
727 2970157122
728 2970158765
729 2970174921
730 2970183479
731 2970192552
732 2977518276
733 2977540433
734 2977557881
735 2977565467
736 2979091945
737 2979100968
738 2989350298
739 2996889803
740 3005410095
741 3005458344
742 639651142
743 8005276963
744 8005284947
745 8005312222
746 8005324330
747 8005436503
748 8005624875
749 8005627313
750 8005661057
751 8005662174
752 8005674525
753 8005699054
754 8018130290
755 8018134482
756 8018169606
757 8018180594
758 8024504121
759 8054560464
760 8055433345
761 8056379780
762 8056386419

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03428

RP-C

Replication protein C N-terminal domain

50

224

0.98

PF11800

RP-C_C

Replication protein C C-terminal region

331

432

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
3jsp-assembly1.cif.gz_B classic protein with a new twist: crystal structure of a lexa repressor dna complex 0.7249 53 141
3jso-assembly1.cif.gz_A classic protein with a new twist: crystal structure of a lexa repressor dna complex 0.7238 53 141
3jso-assembly1.cif.gz_B classic protein with a new twist: crystal structure of a lexa repressor dna complex 0.7213 53 141
4ray-assembly1.cif.gz_A crystal structure of magnetospirillum gryphiswaldense msr-1 apo-fur 0.6666 53 121
6fai-assembly1.cif.gz_l structure of a eukaryotic cytoplasmic pre-40s ribosomal subunit 0.6489 45 157
ID Description Score Start End Superfamily
1o3tA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.7508 55 115 1.10.10.10
3jspB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.7249 53 141 1.10.10.10
af_P9WHR7_25_91_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.6943 53 126 1.10.10.10
3jspB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.6822 53 141 1.10.10.10
1o3tA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.6764 55 115 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A2S9J9L8-F1-model_v4 Replication initiation protein 0.9852 332 398
AF-A0A7C9RDN2-F1-model_v4 Replication initiation protein RepC 0.9847 324 392
AF-A0A847JIA2-F1-model_v4 Replication initiation protein RepC 0.981 293 393
AF-A0A163XSY7-F1-model_v4 Plasmid replication protein C C-terminal domain-containing protein 0.9769 299 399
AF-Q9EVM5-F1-model_v4 Replication protein 0.9751 36 228

Map