F426788

General Info

Members Datasets Scaffolds Average Seq Length
374 244 346 304

Family's Representative Sequence

Representative Sequence 3300039437|Ga0436365_0509338|Ga0436365_0509338_1051_2145
Length 364
Sequence MKPVHALRAGAEVWSESAAPDAGTTIGIPPRQNRIEPVGILSRDGHSDRNSTNPLKKVPAVSSRRPVGTNIDLKLLAIISELHRTRSVSHAAENLRLSQSTISMSLAKLRRHFNDPLFVRTSTGMEPTPHALEVLSLLRKAEGLIQSALEHHVVFNPSTSDRVFHICSTDIAQLTLLPTLMRKLKQAAPSIRIDLLNISESIPERLESGEVDLAIGFIPPMGAGFYQQRLFRDRFVCAVRTGHPRVKDELTLEGFEKETHLTVATSGTGHSILERTLDGKRIRRKVGLKVPSFLGLAPILTSTDFLAVLPEQLGRFFASTGQIKVLPLPFNVSPYFILQHWHERYNHDPANVWLRGVLAELFFQ

Samples

Sample ID Description Type Environment
1 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
2 2511231002 Polaromonas sp. CF318 Isolate Rhizosphere
3 2547132374 Acidovorax radicis N35 Isolate Unclassified
4 2599185214 Variovorax sp. NFACC26 Isolate Rhizoplane
5 2599185226 Variovorax sp. NFACC27 Isolate Rhizoplane
6 2599185227 Variovorax sp. NFACC28 Isolate Rhizoplane
7 2599185229 Variovorax sp. NFACC29 Isolate Endosphere
8 2600255389 Pseudomonas sp. NFPP33 Isolate Rhizoplane
9 2643221609 Acidovorax sp. Root217 Isolate Unclassified
10 2643221611 Acidovorax sp. Root219 Isolate Unclassified
11 2643221658 Variovorax sp. Root411 Isolate Unclassified
12 2643221717 Acidovorax sp. Root267 Isolate Unclassified
13 2738543012 Acidovorax sp. CF301 Isolate Unclassified
14 2816332133 Acidovorax radicis 2721A Isolate Unclassified
15 2818991446 Variovorax sp. 1180 Isolate Unclassified
16 2831265667 Variovorax guangxiensis DSM 27352 Isolate Rhizosphere
17 2838054893 Variovorax guangxiensis 34/80 Isolate Nodule
18 2842733646 Variovorax sp. R-72446 Isolate Unclassified
19 2842747753 Variovorax sp. R-72060 Isolate Unclassified
20 2857576091 Pigmentiphaga sp. R-72090 Isolate Unclassified
21 2899924645 Variovorax sp. 369 Isolate Unclassified
22 2928037797 Variovorax sp. 1126 Isolate Unclassified
23 2928044640 Variovorax sp. 1128 Isolate Unclassified
24 2928051484 Variovorax sp. 1133 Isolate Unclassified
25 2928064002 Variovorax sp. 1140 Isolate Rhizosphere
26 2928070936 Variovorax gossypii 1167 Isolate Unclassified
27 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere
28 2990710928 Acidovorax delafieldii SLBN-75 Isolate Rhizosphere
29 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
30 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
31 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
32 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
33 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
34 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
35 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
36 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
37 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
38 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
39 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
40 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
41 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
42 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
43 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
44 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
45 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
46 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
47 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
48 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
49 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
50 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
51 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
52 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
53 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
54 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
55 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
56 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
57 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
58 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
59 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
60 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
61 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
62 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
63 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
64 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
65 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
66 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
67 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
68 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
69 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
70 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
71 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
72 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
73 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
74 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
75 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
76 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
77 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
78 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
79 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
80 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
81 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
82 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
83 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
84 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
85 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
86 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
87 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
88 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
89 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
90 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
91 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
92 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
93 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
94 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
95 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
96 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
97 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
98 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
99 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
100 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
101 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
102 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
103 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
104 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
105 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
106 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
107 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
108 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
109 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
110 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
111 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
112 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
113 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
114 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
115 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
116 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
117 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
118 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
119 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
120 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
121 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
122 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
123 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
124 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
125 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
126 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
127 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
128 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
129 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
130 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
131 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
132 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
133 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
134 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
135 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
136 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
137 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
138 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
140 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
142 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
143 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
144 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
145 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
146 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
147 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
148 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
149 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
150 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
151 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
152 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
153 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
154 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
155 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
156 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
157 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
158 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
159 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
160 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
161 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
162 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
163 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
164 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
165 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
166 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
167 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
168 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
169 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
170 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
171 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
172 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
173 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
174 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
175 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
176 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
177 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
178 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
179 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
180 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
181 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
182 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
183 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
184 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
185 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
186 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
187 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
188 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
189 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
190 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
191 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
192 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
193 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
194 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
195 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
196 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
197 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
198 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
199 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
200 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
201 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
202 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
203 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
204 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
205 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
206 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
207 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
208 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
209 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
210 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
211 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
212 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
213 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
214 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
215 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
216 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
217 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
218 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
219 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
220 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
221 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
222 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
223 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
224 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
225 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
226 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
227 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
228 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
229 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
230 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
231 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
232 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
233 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
234 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
235 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
236 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
237 3300053110 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 endosphere Metagenome Endosphere
238 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
239 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
240 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
241 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
242 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
243 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
244 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.98
Metatranscriptomes 0.53
Isolates 7.49

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 35.56
Nodule 0.53
Rhizoplane 2.94
Rhizosphere 49.47
Stem 0
Stem Tuber 0
Unclassified 11.5

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 MBSR1b_contig_2230756 2162886012 Bacteria 1569
2 JGI24739J22299_10019255 3300001989 Bacteria 2445
3 JGI25155J39150_1000062 3300002704 Bacteria 70719
4 JGI25156J39149_1000012 3300002705 Bacteria 194393
5 JGI25154J39366_1000029 3300002738 Bacteria 194393
6 JGI25158J39367_1008268 3300002739 Bacteria 1451
7 JGI25157J39369_1000014 3300002741 Bacteria 194393
8 JGI25150J39212_1007907 3300002774 Bacteria 2109
9 JGI25150J39212_1009083 3300002774 Bacteria 1914
10 JGI25159J45721_1000054 3300002987 Bacteria 56576
11 JGI25159J45721_1001495 3300002987 Bacteria 9583
12 JGI25159J45721_1013626 3300002987 Bacteria 1872
13 JGI25151J46595_10006891 3300003187 Bacteria 5641
14 JGI25151J46595_10014675 3300003187 Bacteria 3480
15 JGI25151J46595_10056867 3300003187 Bacteria 1280
16 JGI25160J50197_1000088 3300003354 Bacteria 93050
17 JGI25160J50197_1000119 3300003354 Bacteria 71366
18 JGI25160J50197_1006926 3300003354 Bacteria 4510
19 JGI25160J50197_1022102 3300003354 Bacteria 1872
20 JGI25161J50226_1000056 3300003374 Bacteria 103097
21 JGI25161J50226_1005980 3300003374 Bacteria 2267
22 JGI25161J50226_1009011 3300003374 Bacteria 1469
23 Ga0006562J51391_1037515 3300003578 Bacteria 2070
24 Ga0006562J51391_1037521 3300003578 Bacteria 2650
25 Ga0055535_1000067 3300003761 Bacteria 115376
26 Ga0055542_1000013 3300003762 Bacteria 387560
27 Ga0055526_1001241 3300003771 Bacteria 18296
28 Ga0055526_1009017 3300003771 Bacteria 4876
29 Ga0055537_1000047 3300003773 Bacteria 88000
30 Ga0055524_1000039 3300003775 Bacteria 159897
31 Ga0055524_1025115 3300003775 Bacteria 1872
32 Ga0055524_1025187 3300003775 Bacteria 1868
33 Ga0055536_1010194 3300003781 Bacteria 3765
34 Ga0055534_1000141 3300003784 Bacteria 53818
35 Ga0055528_1000361 3300003790 Bacteria 37049
36 Ga0055530_10000532 3300003791 Bacteria 33030
37 Ga0055530_10001117 3300003791 Bacteria 20996
38 Ga0055530_10011413 3300003791 Bacteria 3191
39 Ga0055540_1000047 3300003792 Bacteria 146914
40 Ga0055540_1011416 3300003792 Bacteria 2866
41 Ga0055540_1017356 3300003792 Bacteria 2012
42 Ga0055531_10004726 3300003794 Bacteria 8147
43 Ga0055543_1002967 3300004625 Bacteria 5278
44 Ga0055543_1008548 3300004625 Bacteria 2261
45 Ga0065165_1004609 3300005262 Bacteria 8385
46 Ga0065165_1014314 3300005262 Bacteria 3088
47 Ga0065165_1020979 3300005262 Bacteria 2281
48 Ga0065165_1038549 3300005262 Bacteria 1440
49 Ga0070676_10079208 3300005328 Bacteria 1989
50 Ga0070690_100074715 3300005330 Unclassified 2208
51 Ga0070670_100000969 3300005331 Bacteria 22537
52 Ga0070677_10000404 3300005333 Bacteria 15016
53 Ga0068869_100021797 3300005334 Bacteria 4409
54 Ga0068868_100006071 3300005338 Bacteria 8531
55 Ga0070689_100235070 3300005340 Bacteria 1508
56 Ga0070661_100096294 3300005344 Bacteria 2196
57 Ga0070661_100103036 3300005344 Bacteria 2125
58 Ga0070669_100018612 3300005353 Bacteria 4965
59 Ga0070669_100030443 3300005353 Bacteria 3895
60 Ga0070669_100086347 3300005353 Bacteria 2344
61 Ga0070675_100003585 3300005354 Bacteria 11804
62 Ga0070671_100000797 3300005355 Bacteria 22748
63 Ga0070671_100036619 3300005355 Bacteria 4069
64 Ga0070671_100249823 3300005355 Bacteria 1507
65 Ga0070674_100019910 3300005356 Bacteria 4274
66 Ga0070673_100100131 3300005364 Bacteria 2385
67 Ga0070688_100007485 3300005365 Bacteria 5890
68 Ga0070688_100124927 3300005365 Bacteria 1728
69 Ga0070659_100024370 3300005366 Viruses 4639
70 Ga0070659_100322516 3300005366 Bacteria 1291
71 Ga0070667_100029704 3300005367 Bacteria 4557
72 Ga0070709_10365773 3300005434 Unclassified 1069
73 Ga0070714_100167371 3300005435 Bacteria 1992
74 Ga0070713_100136415 3300005436 Bacteria 2169
75 Ga0070678_100007524 3300005456 Bacteria 6469
76 Ga0070678_100057069 3300005456 Unclassified 2859
77 Ga0070681_10000175 3300005458 Bacteria 48999
78 Ga0068867_100002774 3300005459 Bacteria 12328
79 Ga0068867_100054959 3300005459 Unclassified 2942
80 Ga0068853_100027653 3300005539 Bacteria 4766
81 Ga0070672_100002473 3300005543 Bacteria 11742
82 Ga0070672_100016482 3300005543 Bacteria 5291
83 Ga0070696_100080345 3300005546 Bacteria 2308
84 Ga0070696_100196621 3300005546 Bacteria 1503
85 Ga0068855_100011776 3300005563 Bacteria 10576
86 Ga0070664_100005824 3300005564 Bacteria 9941
87 Ga0070664_100166574 3300005564 Bacteria 1953
88 Ga0068857_100071588 3300005577 Bacteria 3089
89 Ga0068856_100252189 3300005614 Bacteria 1780
90 Ga0068851_10019128 3300005834 Bacteria 3308
91 Ga0068851_10056086 3300005834 Bacteria 2009
92 Ga0068863_100087914 3300005841 Bacteria 2945
93 Ga0068863_100137351 3300005841 Bacteria 2335
94 Ga0068863_100304507 3300005841 Bacteria 1546
95 Ga0068860_100273753 3300005843 Bacteria 1648
96 Ga0068862_100064903 3300005844 Bacteria 3144
97 Ga0081540_1001170 3300005983 Bacteria 23013
98 Ga0075368_10065378 3300006042 Bacteria 1461
99 Ga0075364_10158185 3300006051 Bacteria 1529
100 Ga0075432_10030756 3300006058 Bacteria 1856
101 Ga0075366_10009681 3300006195 Bacteria 5386
102 Ga0075366_10117139 3300006195 Bacteria 1604
103 Ga0097621_100004210 3300006237 Bacteria 9984
104 Ga0075370_10019792 3300006353 Bacteria 3668
105 Ga0075370_10176946 3300006353 Bacteria 1255
106 Ga0068871_100053289 3300006358 Bacteria 3278
107 Ga0068871_100071103 3300006358 Bacteria 2861
108 Ga0075430_100172230 3300006846 Unclassified 1801
109 Ga0079104_1022444 3300006946 Bacteria 1698
110 Ga0099794_10005855 3300007265 Bacteria 4958
111 Ga0105240_10011776 3300009093 Bacteria 12150
112 Ga0105240_10024583 3300009093 Bacteria 7936
113 Ga0105248_10044152 3300009177 Bacteria 4999
114 Ga0105237_10040771 3300009545 Viruses 4682
115 Ga0105249_10004287 3300009553 Bacteria 12329
116 Ga0099796_10008314 3300010159 Bacteria 2763
117 Ga0105239_10410371 3300010375 Bacteria 1533
118 Ga0157370_10070082 3300013104 Bacteria 3311
119 Ga0157370_10402827 3300013104 Bacteria 1259
120 Ga0157369_10091614 3300013105 Bacteria 3245
121 Ga0163162_10147145 3300013306 Bacteria 2472
122 Ga0157372_10027109 3300013307 Bacteria 6237
123 Ga0157372_10125499 3300013307 Bacteria 2951
124 Ga0157375_10064265 3300013308 Unclassified 3653
125 Ga0157375_10074790 3300013308 Bacteria 3410
126 Ga0163163_10270756 3300014325 Bacteria 1750
127 Ga0157377_10119635 3300014745 Bacteria 1595
128 Ga0157379_10208012 3300014968 Bacteria 1770
129 Ga0157376_10069269 3300014969 Bacteria 2990
130 Ga0157376_10433814 3300014969 Bacteria 1278
131 Ga0163161_10007384 3300017792 Bacteria 7590
132 Ga0163161_10129200 3300017792 Bacteria 1904
133 Ga0163161_10273783 3300017792 Bacteria 1322
134 Ga0209435_100002 3300025206 Bacteria 794178
135 Ga0209436_106065 3300025208 Bacteria 2694
136 Ga0209436_106275 3300025208 Bacteria 2626
137 Ga0209672_100764 3300025228 Bacteria 15454
138 Ga0209147_101214 3300025229 Bacteria 10309
139 Ga0209258_100020 3300025242 Bacteria 565241
140 Ga0207425_1000201 3300025245 Bacteria 47830
141 Ga0207425_1003048 3300025245 Bacteria 5558
142 Ga0207425_1009087 3300025245 Bacteria 2497
143 Ga0209646_1000001 3300025246 Bacteria 3092932
144 Ga0209026_1000040 3300025250 Bacteria 277470
145 Ga0209148_1000031 3300025254 Bacteria 564601
146 Ga0209759_1000001 3300025256 Bacteria 2799452
147 Ga0209129_1000055 3300025258 Bacteria 261708
148 Ga0209129_1005697 3300025258 Bacteria 4299
149 Ga0209129_1007870 3300025258 Bacteria 3075
150 Ga0209565_1000080 3300025263 Bacteria 156999
151 Ga0209565_1000390 3300025263 Bacteria 37251
152 Ga0209565_1000876 3300025263 Bacteria 16569
153 Ga0209565_1001881 3300025263 Bacteria 8326
154 Ga0209673_1000088 3300025273 Bacteria 204629
155 Ga0209673_1001037 3300025273 Bacteria 32517
156 Ga0209130_1000040 3300025284 Bacteria 262926
157 Ga0209130_1000214 3300025284 Bacteria 76202
158 Ga0209130_1000346 3300025284 Bacteria 53329
159 Ga0209130_1001298 3300025284 Bacteria 17208
160 Ga0209130_1023988 3300025284 Bacteria 1338
161 Ga0209675_1000133 3300025291 Bacteria 101207
162 Ga0209675_1000471 3300025291 Bacteria 30899
163 Ga0209675_1000956 3300025291 Bacteria 18314
164 Ga0209675_1013730 3300025291 Bacteria 2510
165 Ga0209675_1019902 3300025291 Bacteria 1833
166 Ga0209676_1000040 3300025292 Bacteria 438184
167 Ga0209676_1000073 3300025292 Bacteria 305947
168 Ga0209676_1000508 3300025292 Bacteria 61404
169 Ga0209676_1002444 3300025292 Bacteria 13185
170 Ga0209676_1021128 3300025292 Bacteria 2194
171 Ga0209025_1000510 3300025294 Bacteria 74231
172 Ga0209025_1003514 3300025294 Bacteria 14717
173 Ga0209025_1004730 3300025294 Bacteria 11596
174 Ga0209025_1009312 3300025294 Bacteria 6873
175 Ga0209025_1009596 3300025294 Bacteria 6715
176 Ga0209025_1009688 3300025294 Bacteria 6663
177 Ga0209564_1000254 3300025295 Bacteria 113032
178 Ga0209564_1000313 3300025295 Bacteria 95224
179 Ga0209564_1000410 3300025295 Bacteria 76208
180 Ga0209564_1000823 3300025295 Bacteria 42196
181 Ga0209564_1005212 3300025295 Bacteria 7521
182 Ga0209758_1000042 3300025297 Bacteria 407145
183 Ga0209758_1005216 3300025297 Bacteria 10191
184 Ga0209758_1008325 3300025297 Bacteria 6757
185 Ga0209050_1000008 3300025298 Bacteria 1144179
186 Ga0209050_1000021 3300025298 Bacteria 574406
187 Ga0209050_1001577 3300025298 Bacteria 23647
188 Ga0209050_1001781 3300025298 Bacteria 21203
189 Ga0209050_1008118 3300025298 Bacteria 5691
190 Ga0209256_1000056 3300025299 Bacteria 283044
191 Ga0209256_1000096 3300025299 Bacteria 204629
192 Ga0209256_1000148 3300025299 Bacteria 147639
193 Ga0207426_1000055 3300025302 Bacteria 374450
194 Ga0207426_1000079 3300025302 Bacteria 314709
195 Ga0207426_1000188 3300025302 Bacteria 153510
196 Ga0207426_1001354 3300025302 Bacteria 20775
197 Ga0209051_1000005 3300025303 Bacteria 1142353
198 Ga0209051_1000028 3300025303 Bacteria 404269
199 Ga0209051_1000126 3300025303 Bacteria 142582
200 Ga0209051_1013674 3300025303 Bacteria 3844
201 Ga0209051_1065991 3300025303 Bacteria 1113
202 Ga0209257_1000031 3300025304 Bacteria 688770
203 Ga0209257_1000043 3300025304 Bacteria 512127
204 Ga0209257_1000214 3300025304 Bacteria 136547
205 Ga0209257_1001556 3300025304 Bacteria 26602
206 Ga0209257_1002902 3300025304 Bacteria 15869
207 Ga0207697_10009765 3300025315 Bacteria 4131
208 Ga0207655_1001433 3300025728 Bacteria 22106
209 Ga0207645_10046504 3300025907 Bacteria 2772
210 Ga0207643_10040284 3300025908 Bacteria 2630
211 Ga0207707_10000660 3300025912 Bacteria 34202
212 Ga0207671_10024553 3300025914 Viruses 4529
213 Ga0207671_10192759 3300025914 Bacteria 1589
214 Ga0207657_10126330 3300025919 Bacteria 2100
215 Ga0207649_10067005 3300025920 Bacteria 2278
216 Ga0207649_10071074 3300025920 Bacteria 2221
217 Ga0207649_10299695 3300025920 Bacteria 1175
218 Ga0207681_10008765 3300025923 Bacteria 6178
219 Ga0207681_10011633 3300025923 Bacteria 5409
220 Ga0207681_10013641 3300025923 Bacteria 5032
221 Ga0207694_10213806 3300025924 Bacteria 1571
222 Ga0207650_10001017 3300025925 Bacteria 21068
223 Ga0207659_10000361 3300025926 Bacteria 27251
224 Ga0207659_10038935 3300025926 Unclassified 3311
225 Ga0207700_10128081 3300025928 Bacteria 2068
226 Ga0207664_10100405 3300025929 Bacteria 2389
227 Ga0207644_10001639 3300025931 Bacteria 14427
228 Ga0207644_10062516 3300025931 Bacteria 2701
229 Ga0207644_10209105 3300025931 Bacteria 1542
230 Ga0207706_10014444 3300025933 Bacteria 7157
231 Ga0207709_10001468 3300025935 Bacteria 16374
232 Ga0207704_10299399 3300025938 Bacteria 1231
233 Ga0207691_10000792 3300025940 Bacteria 31429
234 Ga0207691_10008859 3300025940 Bacteria 9657
235 Ga0207689_10023535 3300025942 Bacteria 5168
236 Ga0207689_10554377 3300025942 Bacteria 965
237 Ga0207679_10004559 3300025945 Bacteria 8629
238 Ga0207679_10069869 3300025945 Bacteria 2644
239 Ga0207679_10158885 3300025945 Bacteria 1848
240 Ga0207651_10005459 3300025960 Bacteria 6530
241 Ga0207640_10045865 3300025981 Bacteria 2810
242 Ga0207640_10383702 3300025981 Bacteria 1139
243 Ga0207658_10022057 3300025986 Bacteria 4429
244 Ga0207658_10178249 3300025986 Bacteria 1757
245 Ga0207658_10432929 3300025986 Bacteria 1162
246 Ga0207677_10004058 3300026023 Bacteria 7822
247 Ga0207639_10029940 3300026041 Bacteria 3990
248 Ga0207639_10033100 3300026041 Bacteria 3811
249 Ga0207639_10159940 3300026041 Bacteria 1897
250 Ga0207678_10129538 3300026067 Bacteria 2152
251 Ga0207708_10148341 3300026075 Bacteria 1845
252 Ga0207641_10598243 3300026088 Bacteria 1079
253 Ga0207648_10002362 3300026089 Bacteria 20372
254 Ga0207648_10137640 3300026089 Bacteria 2151
255 Ga0207674_10085526 3300026116 Bacteria 3149
256 Ga0207683_10001592 3300026121 Bacteria 20430
257 Ga0207683_10008923 3300026121 Bacteria 8543
258 Ga0209970_1000935 3300027614 Bacteria 5177
259 Ga0209588_1018032 3300027671 Bacteria 2195
260 Ga0207428_10088327 3300027907 Bacteria 2411
261 Ga0268264_10055764 3300028381 Unclassified 3303
262 Ga0307517_10000131 3300028786 Bacteria 113233
263 Ga0307517_10132638 3300028786 Bacteria 1786
264 Ga0307515_10236515 3300028794 Bacteria 1607
265 Ga0265338_10009780 3300028800 Bacteria 11378
266 Ga0307511_10000037 3300030521 Bacteria 103008
267 Ga0307509_10000034 3300031507 Bacteria 193380
268 Ga0307508_10248494 3300031616 Bacteria 1375
269 Ga0307405_10312768 3300031731 Bacteria 1196
270 Ga0373936_0070656 3300035113 Bacteria 1438
271 Ga0395900_0233812 3300037418 Bacteria 1847
272 Ga0395898_0475256 3300037466 Bacteria 1189
273 Ga0395905_0000514 3300037471 Bacteria 52950
274 Ga0395905_0001299 3300037471 Bacteria 30721
275 Ga0395905_0004722 3300037471 Bacteria 14074
276 Ga0436365_0509338 3300039437 Unclassified 3289
277 Ga0466969_0043937 3300044656 Bacteria 2225
278 Ga0466970_0058646 3300044765 Bacteria 2061
279 Ga0466959_0003549 3300045049 Bacteria 10253
280 Ga0451576_0035617 3300045051 Bacteria 5279
281 Ga0451576_0115321 3300045051 Bacteria 2797
282 Ga0495592_0333550 3300046454 Bacteria 977
283 Ga0495638_0028763 3300046460 Bacteria 3587
284 Ga0495651_0043475 3300046462 Bacteria 3486
285 Ga0495650_0116065 3300046471 Bacteria 989
286 Ga0495580_0179979 3300046472 Bacteria 1460
287 Ga0495607_0000050 3300046501 Bacteria 120052
288 Ga0495610_0051692 3300046512 Bacteria 1998
289 Ga0495616_0000588 3300046513 Bacteria 27347
290 Ga0495631_0000096 3300046518 Bacteria 58530
291 Ga0495637_0063128 3300046520 Bacteria 1514
292 Ga0495637_0064044 3300046520 Bacteria 1501
293 Ga0495644_0015418 3300046523 Bacteria 2926
294 Ga0495654_0013511 3300046530 Bacteria 4368
295 Ga0495621_0016686 3300046539 Bacteria 2361
296 Ga0495597_0038551 3300046542 Bacteria 2141
297 Ga0495622_0074504 3300046557 Bacteria 1565
298 Ga0495668_0112635 3300046616 Unclassified 1488
299 Ga0495611_0092835 3300046648 Bacteria 1396
300 Ga0495625_0039100 3300046660 Bacteria 3466
301 Ga0495625_0115189 3300046660 Bacteria 1834
302 Ga0495661_0014766 3300046665 Bacteria 5228
303 Ga0495661_0139468 3300046665 Bacteria 1320
304 Ga0495588_0125178 3300046674 Bacteria 1355
305 Ga0495649_0009088 3300046694 Bacteria 5930
306 Ga0495660_0018541 3300046810 Bacteria 4001
307 Ga0495687_003410 3300047443 Bacteria 11562
308 Ga0495687_013362 3300047443 Bacteria 4293
309 Ga0495626_0003695 3300048091 Bacteria 9685
310 Ga0496102_0001370 3300048905 Bacteria 21758
311 Ga0496106_0114308 3300048909 Bacteria 2105
312 Ga0496108_0086839 3300048911 Bacteria 2656
313 Ga0496110_0414562 3300048913 Bacteria 1228
314 Ga0496111_0288566 3300048914 Bacteria 1217
315 Ga0496112_0005035 3300048915 Bacteria 11345
316 Ga0496113_0032949 3300048916 Bacteria 3769
317 Ga0496116_0042508 3300048919 Bacteria 3105
318 Ga0496117_0118880 3300048920 Bacteria 1628
319 Ga0496118_0008320 3300048921 Bacteria 10745
320 Ga0496118_0010645 3300048921 Bacteria 9078
321 Ga0496119_0024190 3300048922 Bacteria 4279
322 Ga0496122_0000618 3300048925 Bacteria 72850
323 Ga0496123_0002222 3300048926 Bacteria 24628
324 Ga0496123_0160496 3300048926 Bacteria 1199
325 Ga0496125_0020318 3300048928 Bacteria 6234
326 Ga0496126_0357184 3300048929 Bacteria 1194
327 Ga0501067_0041314 3300049583 Bacteria 2561
328 nmdc:mga03n38_55717_c1 3300050490 Bacteria 1782
329 nmdc:mga0k408_113284_c1 3300050493 Bacteria 1604
330 nmdc:mga0k408_266699_c1 3300050493 Bacteria 1022
331 nmdc:mga0k408_45903_c1 3300050493 Bacteria 2522
332 nmdc:mga07m45_2976_c1 3300050496 Bacteria 8063
333 nmdc:mga0qj67_196064_c1 3300050509 Bacteria 1641
334 nmdc:mga0qj67_84577_c1 3300050509 Unclassified 2544
335 Ga0500643_000900 3300053087 Bacteria 18833
336 Ga0500583_0134559 3300053092 Bacteria 1227
337 Ga0500562_019952 3300053108 Bacteria 1738
338 Ga0500571_000053 3300053110 Bacteria 35478
339 Ga0500593_000057 3300053117 Bacteria 41215
340 Ga0500608_073839 3300053122 Bacteria 1618
341 Ga0500618_022618 3300053125 Bacteria 1527
342 Ga0500658_0000099 3300053134 Bacteria 39743
343 Ga0500658_0008712 3300053134 Bacteria 3745
344 Ga0500564_087488 3300053138 Bacteria 1390
345 Ga0500568_0000397 3300053139 Bacteria 33277
346 Ga0500636_0219083 3300053177 Bacteria 993

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046454 Ga0495592_0333550 Ga0495592_0333550_139_966 275
2 3300035113 Ga0373936_0070656 Ga0373936_0070656_88_1062 276
3 3300005546 Ga0070696_100196621 Ga0070696_1001966212 283
4 iso_pu_bacteria 2599185214 2599622346 294
5 iso_pu_bacteria 2599185226 2599674562 294
6 iso_pu_bacteria 2599185227 2599680247 294
7 iso_pu_bacteria 2599185229 2599692263 294
8 iso_pu_bacteria 2643221658 2644326481 294
9 iso_pu_bacteria 2818991446 2819599034 294
10 iso_pu_bacteria 2831265667 2831270823 294
11 iso_pu_bacteria 2838054893 2838058870 294
12 iso_pu_bacteria 2899924645 2899929866 294
13 iso_pu_bacteria 2928037797 2928042203 294
14 iso_pu_bacteria 2928044640 2928049972 294
15 iso_pu_bacteria 2928051484 2928054542 294
16 iso_pu_bacteria 2928064002 2928070130 294
17 iso_pu_bacteria 2928070936 2928074251 294
18 3300005340 Ga0070689_100235070 Ga0070689_1002350702 296
19 3300005458 Ga0070681_10000175 Ga0070681_1000017512 296
20 3300025912 Ga0207707_10000660 Ga0207707_1000066023 296
21 3300046462 Ga0495651_0043475 Ga0495651_0043475_2009_2899 296
22 3300049583 Ga0501067_0041314 Ga0501067_0041314_1288_2211 296
23 iso_pu_bacteria 2600255389 2602011717 296
24 iso_pu_bacteria 2842733646 2842735281 296
25 iso_pu_bacteria 2842747753 2842749959 296
26 iso_pu_bacteria 2857576091 2857577817 296
27 3300009093 Ga0105240_10024583 Ga0105240_100245832 297
28 3300013104 Ga0157370_10070082 Ga0157370_100700822 297
29 3300013307 Ga0157372_10027109 Ga0157372_100271094 297
30 3300014325 Ga0163163_10270756 Ga0163163_102707562 297
31 3300014968 Ga0157379_10208012 Ga0157379_102080122 297
32 3300044656 Ga0466969_0043937 Ga0466969_0043937_124_1017 297
33 3300044765 Ga0466970_0058646 Ga0466970_0058646_703_1596 297
34 3300045049 Ga0466959_0003549 Ga0466959_0003549_7571_8464 297
35 iso_pu_bacteria 2511231002 2511242541 297
36 iso_pu_bacteria 2939631187 2939635543 297
37 3300001989 JGI24739J22299_10019255 JGI24739J22299_100192552 298
38 3300002739 JGI25158J39367_1008268 JGI25158J39367_10082682 298
39 3300002774 JGI25150J39212_1009083 JGI25150J39212_10090831 298
40 3300002987 JGI25159J45721_1013626 JGI25159J45721_10136262 298
41 3300003354 JGI25160J50197_1006926 JGI25160J50197_10069265 298
42 3300003354 JGI25160J50197_1022102 JGI25160J50197_10221022 298
43 3300003374 JGI25161J50226_1005980 JGI25161J50226_10059802 298
44 3300003374 JGI25161J50226_1009011 JGI25161J50226_10090112 298
45 3300003578 Ga0006562J51391_1037515 Ga0006562J51391_10375151 298
46 3300003578 Ga0006562J51391_1037521 Ga0006562J51391_10375211 298
47 3300003761 Ga0055535_1000067 Ga0055535_100006765 298
48 3300003762 Ga0055542_1000013 Ga0055542_100001389 298
49 3300003775 Ga0055524_1025115 Ga0055524_10251152 298
50 3300003775 Ga0055524_1025187 Ga0055524_10251872 298
51 3300003781 Ga0055536_1010194 Ga0055536_10101945 298
52 3300003791 Ga0055530_10001117 Ga0055530_100011172 298
53 3300003792 Ga0055540_1011416 Ga0055540_10114162 298
54 3300003792 Ga0055540_1017356 Ga0055540_10173562 298
55 3300004625 Ga0055543_1008548 Ga0055543_10085482 298
56 3300005262 Ga0065165_1020979 Ga0065165_10209792 298
57 3300005353 Ga0070669_100018612 Ga0070669_1000186126 298
58 3300005366 Ga0070659_100322516 Ga0070659_1003225161 298
59 3300005614 Ga0068856_100252189 Ga0068856_1002521892 298
60 3300005834 Ga0068851_10056086 Ga0068851_100560863 298
61 3300006195 Ga0075366_10117139 Ga0075366_101171392 298
62 3300006353 Ga0075370_10176946 Ga0075370_101769461 298
63 3300009177 Ga0105248_10044152 Ga0105248_100441522 298
64 3300010375 Ga0105239_10410371 Ga0105239_104103712 298
65 3300013104 Ga0157370_10402827 Ga0157370_104028271 298
66 3300017792 Ga0163161_10129200 Ga0163161_101292002 298
67 3300017792 Ga0163161_10273783 Ga0163161_102737832 298
68 3300025208 Ga0209436_106065 Ga0209436_1060652 298
69 3300025228 Ga0209672_100764 Ga0209672_10076413 298
70 3300025229 Ga0209147_101214 Ga0209147_1012145 298
71 3300025242 Ga0209258_100020 Ga0209258_100020244 298
72 3300025245 Ga0207425_1000201 Ga0207425_100020126 298
73 3300025245 Ga0207425_1003048 Ga0207425_10030483 298
74 3300025254 Ga0209148_1000031 Ga0209148_1000031244 298
75 3300025258 Ga0209129_1000055 Ga0209129_1000055119 298
76 3300025258 Ga0209129_1007870 Ga0209129_10078703 298
77 3300025263 Ga0209565_1000390 Ga0209565_100039014 298
78 3300025263 Ga0209565_1001881 Ga0209565_10018815 298
79 3300025273 Ga0209673_1001037 Ga0209673_100103714 298
80 3300025284 Ga0209130_1000214 Ga0209130_100021439 298
81 3300025284 Ga0209130_1001298 Ga0209130_100129818 298
82 3300025291 Ga0209675_1000956 Ga0209675_10009564 298
83 3300025291 Ga0209675_1013730 Ga0209675_10137302 298
84 3300025292 Ga0209676_1000040 Ga0209676_1000040145 298
85 3300025292 Ga0209676_1000508 Ga0209676_10005086 298
86 3300025292 Ga0209676_1021128 Ga0209676_10211283 298
87 3300025294 Ga0209025_1000510 Ga0209025_100051028 298
88 3300025294 Ga0209025_1009688 Ga0209025_10096886 298
89 3300025295 Ga0209564_1000254 Ga0209564_100025441 298
90 3300025295 Ga0209564_1000410 Ga0209564_100041039 298
91 3300025297 Ga0209758_1000042 Ga0209758_1000042241 298
92 3300025297 Ga0209758_1008325 Ga0209758_10083253 298
93 3300025298 Ga0209050_1000021 Ga0209050_1000021248 298
94 3300025298 Ga0209050_1001781 Ga0209050_100178116 298
95 3300025299 Ga0209256_1000056 Ga0209256_100005625 298
96 3300025299 Ga0209256_1000148 Ga0209256_100014839 298
97 3300025302 Ga0207426_1000055 Ga0207426_100005590 298
98 3300025302 Ga0207426_1000079 Ga0207426_1000079246 298
99 3300025303 Ga0209051_1000028 Ga0209051_1000028264 298
100 3300025303 Ga0209051_1000126 Ga0209051_100012666 298
101 3300025303 Ga0209051_1013674 Ga0209051_10136742 298
102 3300025304 Ga0209257_1000043 Ga0209257_1000043243 298
103 3300025304 Ga0209257_1000214 Ga0209257_100021452 298
104 3300025304 Ga0209257_1001556 Ga0209257_10015565 298
105 3300025728 Ga0207655_1001433 Ga0207655_10014335 298
106 3300025914 Ga0207671_10192759 Ga0207671_101927592 298
107 3300025919 Ga0207657_10126330 Ga0207657_101263302 298
108 3300025920 Ga0207649_10071074 Ga0207649_100710742 298
109 3300025923 Ga0207681_10008765 Ga0207681_100087651 298
110 3300025924 Ga0207694_10213806 Ga0207694_102138062 298
111 3300025933 Ga0207706_10014444 Ga0207706_100144444 298
112 3300025935 Ga0207709_10001468 Ga0207709_1000146810 298
113 3300025945 Ga0207679_10069869 Ga0207679_100698692 298
114 3300025981 Ga0207640_10045865 Ga0207640_100458653 298
115 3300025981 Ga0207640_10383702 Ga0207640_103837021 298
116 3300025986 Ga0207658_10432929 Ga0207658_104329291 298
117 3300026041 Ga0207639_10029940 Ga0207639_100299403 298
118 3300026041 Ga0207639_10159940 Ga0207639_101599402 298
119 3300026067 Ga0207678_10129538 Ga0207678_101295382 298
120 3300027614 Ga0209970_1000935 Ga0209970_10009352 298
121 3300031731 Ga0307405_10312768 Ga0307405_103127682 298
122 3300037418 Ga0395900_0233812 Ga0395900_0233812_596_1504 298
123 3300037466 Ga0395898_0475256 Ga0395898_0475256_231_1139 298
124 3300037471 Ga0395905_0001299 Ga0395905_0001299_13537_14445 298
125 3300039437 Ga0436365_0509338 Ga0436365_0509338_1051_2145 298
126 3300046460 Ga0495638_0028763 Ga0495638_0028763_1961_2857 298
127 3300046501 Ga0495607_0000050 Ga0495607_0000050_88641_89546 298
128 3300046512 Ga0495610_0051692 Ga0495610_0051692_974_1870 298
129 3300046513 Ga0495616_0000588 Ga0495616_0000588_8800_9696 298
130 3300046518 Ga0495631_0000096 Ga0495631_0000096_22579_23475 298
131 3300046520 Ga0495637_0064044 Ga0495637_0064044_387_1283 298
132 3300046530 Ga0495654_0013511 Ga0495654_0013511_1871_2767 298
133 3300046539 Ga0495621_0016686 Ga0495621_0016686_1276_2172 298
134 3300046542 Ga0495597_0038551 Ga0495597_0038551_1154_2062 298
135 3300046557 Ga0495622_0074504 Ga0495622_0074504_221_1117 298
136 3300046616 Ga0495668_0112635 Ga0495668_0112635_399_1307 298
137 3300046660 Ga0495625_0115189 Ga0495625_0115189_144_1040 298
138 3300046665 Ga0495661_0014766 Ga0495661_0014766_3299_4207 298
139 3300046674 Ga0495588_0125178 Ga0495588_0125178_204_1100 298
140 3300047443 Ga0495687_013362 Ga0495687_013362_2283_3191 298
141 3300048909 Ga0496106_0114308 Ga0496106_0114308_1077_1973 298
142 3300048913 Ga0496110_0414562 Ga0496110_0414562_295_1203 298
143 3300048914 Ga0496111_0288566 Ga0496111_0288566_212_1120 298
144 3300048919 Ga0496116_0042508 Ga0496116_0042508_1424_2320 298
145 3300048920 Ga0496117_0118880 Ga0496117_0118880_400_1296 298
146 3300048921 Ga0496118_0008320 Ga0496118_0008320_4406_5302 298
147 3300048921 Ga0496118_0010645 Ga0496118_0010645_7913_8809 298
148 3300048922 Ga0496119_0024190 Ga0496119_0024190_2118_3014 298
149 3300048925 Ga0496122_0000618 Ga0496122_0000618_12468_13370 298
150 3300048926 Ga0496123_0002222 Ga0496123_0002222_12378_13280 298
151 3300048926 Ga0496123_0160496 Ga0496123_0160496_100_996 298
152 3300048928 Ga0496125_0020318 Ga0496125_0020318_1715_2611 298
153 3300048929 Ga0496126_0357184 Ga0496126_0357184_236_1132 298
154 3300050493 nmdc:mga0k408_113284_c1 nmdc:mga0k408_113284_c1_517_1419 298
155 3300050496 nmdc:mga07m45_2976_c1 nmdc:mga07m45_2976_c1_6155_7051 298
156 3300053087 Ga0500643_000900 Ga0500643_000900_6491_7387 298
157 3300053108 Ga0500562_019952 Ga0500562_019952_321_1217 298
158 3300053110 Ga0500571_000053 Ga0500571_000053_11630_12526 298
159 3300053122 Ga0500608_073839 Ga0500608_073839_489_1385 298
160 3300053125 Ga0500618_022618 Ga0500618_022618_202_1104 298
161 3300053134 Ga0500658_0000099 Ga0500658_0000099_1851_2747 298
162 3300053138 Ga0500564_087488 Ga0500564_087488_209_1105 298
163 3300053139 Ga0500568_0000397 Ga0500568_0000397_9472_10368 298
164 3300053177 Ga0500636_0219083 Ga0500636_0219083_13_909 298
165 3300002704 JGI25155J39150_1000062 JGI25155J39150_100006258 299
166 3300002705 JGI25156J39149_1000012 JGI25156J39149_1000012162 299
167 3300002738 JGI25154J39366_1000029 JGI25154J39366_10000299 299
168 3300002741 JGI25157J39369_1000014 JGI25157J39369_1000014162 299
169 3300002774 JGI25150J39212_1007907 JGI25150J39212_10079071 299
170 3300002987 JGI25159J45721_1000054 JGI25159J45721_100005439 299
171 3300003354 JGI25160J50197_1000088 JGI25160J50197_100008858 299
172 3300003354 JGI25160J50197_1000119 JGI25160J50197_100011939 299
173 3300003374 JGI25161J50226_1000056 JGI25161J50226_100005639 299
174 3300003791 Ga0055530_10011413 Ga0055530_100114132 299
175 3300004625 Ga0055543_1002967 Ga0055543_10029672 299
176 3300005262 Ga0065165_1004609 Ga0065165_10046092 299
177 3300005262 Ga0065165_1014314 Ga0065165_10143142 299
178 3300006042 Ga0075368_10065378 Ga0075368_100653781 299
179 3300006051 Ga0075364_10158185 Ga0075364_101581852 299
180 3300006058 Ga0075432_10030756 Ga0075432_100307562 299
181 3300006195 Ga0075366_10009681 Ga0075366_100096814 299
182 3300006353 Ga0075370_10019792 Ga0075370_100197925 299
183 3300006946 Ga0079104_1022444 Ga0079104_10224442 299
184 3300025206 Ga0209435_100002 Ga0209435_100002565 299
185 3300025208 Ga0209436_106275 Ga0209436_1062753 299
186 3300025245 Ga0207425_1009087 Ga0207425_10090872 299
187 3300025246 Ga0209646_1000001 Ga0209646_10000012708 299
188 3300025250 Ga0209026_1000040 Ga0209026_100004067 299
189 3300025256 Ga0209759_1000001 Ga0209759_10000012339 299
190 3300025263 Ga0209565_1000876 Ga0209565_100087617 299
191 3300025284 Ga0209130_1000040 Ga0209130_100004058 299
192 3300025291 Ga0209675_1000471 Ga0209675_100047120 299
193 3300025294 Ga0209025_1009312 Ga0209025_10093125 299
194 3300025297 Ga0209758_1005216 Ga0209758_10052162 299
195 3300025298 Ga0209050_1001577 Ga0209050_100157714 299
196 3300025302 Ga0207426_1000188 Ga0207426_100018858 299
197 3300027907 Ga0207428_10088327 Ga0207428_100883272 299
198 3300050490 nmdc:mga03n38_55717_c1 nmdc:mga03n38_55717_c1_560_1489 299
199 3300050493 nmdc:mga0k408_266699_c1 nmdc:mga0k408_266699_c1_23_928 299
200 3300050493 nmdc:mga0k408_45903_c1 nmdc:mga0k408_45903_c1_1526_2455 299
201 3300053117 Ga0500593_000057 Ga0500593_000057_36207_37112 299
202 iso_pu_bacteria 2547132374 2548498604 299
203 iso_pu_bacteria 2643221609 2644059199 299
204 iso_pu_bacteria 2643221717 2644649339 299
205 iso_pu_bacteria 2939631187 2939634001 299
206 iso_pu_bacteria 2990710928 2990712008 299
207 3300037471 Ga0395905_0000514 Ga0395905_0000514_32763_33677 300
208 iso_pu_bacteria 2643221611 2644075759 300
209 iso_pu_bacteria 2738543012 2739240692 300
210 iso_pu_bacteria 2816332133 2816472231 300
211 3300002987 JGI25159J45721_1001495 JGI25159J45721_100149511 301
212 3300003187 JGI25151J46595_10006891 JGI25151J46595_100068917 301
213 3300003187 JGI25151J46595_10014675 JGI25151J46595_100146753 301
214 3300003187 JGI25151J46595_10056867 JGI25151J46595_100568672 301
215 3300003771 Ga0055526_1001241 Ga0055526_100124117 301
216 3300003771 Ga0055526_1009017 Ga0055526_10090172 301
217 3300003773 Ga0055537_1000047 Ga0055537_100004732 301
218 3300003775 Ga0055524_1000039 Ga0055524_100003938 301
219 3300003784 Ga0055534_1000141 Ga0055534_100014129 301
220 3300003790 Ga0055528_1000361 Ga0055528_10003613 301
221 3300003791 Ga0055530_10000532 Ga0055530_1000053227 301
222 3300003792 Ga0055540_1000047 Ga0055540_100004728 301
223 3300003794 Ga0055531_10004726 Ga0055531_1000472612 301
224 3300005262 Ga0065165_1038549 Ga0065165_10385492 301
225 3300005539 Ga0068853_100027653 Ga0068853_1000276534 301
226 3300025258 Ga0209129_1005697 Ga0209129_10056974 301
227 3300025263 Ga0209565_1000080 Ga0209565_100008033 301
228 3300025273 Ga0209673_1000088 Ga0209673_1000088113 301
229 3300025284 Ga0209130_1000346 Ga0209130_100034628 301
230 3300025284 Ga0209130_1023988 Ga0209130_10239881 301
231 3300025291 Ga0209675_1000133 Ga0209675_100013373 301
232 3300025291 Ga0209675_1019902 Ga0209675_10199022 301
233 3300025292 Ga0209676_1000073 Ga0209676_1000073223 301
234 3300025292 Ga0209676_1002444 Ga0209676_100244412 301
235 3300025294 Ga0209025_1003514 Ga0209025_100351412 301
236 3300025294 Ga0209025_1004730 Ga0209025_10047305 301
237 3300025294 Ga0209025_1009596 Ga0209025_10095965 301
238 3300025295 Ga0209564_1000313 Ga0209564_100031351 301
239 3300025295 Ga0209564_1000823 Ga0209564_100082324 301
240 3300025295 Ga0209564_1005212 Ga0209564_10052128 301
241 3300025298 Ga0209050_1000008 Ga0209050_1000008840 301
242 3300025298 Ga0209050_1008118 Ga0209050_10081182 301
243 3300025299 Ga0209256_1000096 Ga0209256_100009694 301
244 3300025302 Ga0207426_1001354 Ga0207426_100135420 301
245 3300025303 Ga0209051_1000005 Ga0209051_1000005840 301
246 3300025303 Ga0209051_1065991 Ga0209051_10659911 301
247 3300025304 Ga0209257_1000031 Ga0209257_1000031430 301
248 3300025304 Ga0209257_1002902 Ga0209257_10029028 301
249 3300026041 Ga0207639_10033100 Ga0207639_100331003 301
250 3300037471 Ga0395905_0004722 Ga0395905_0004722_3394_4320 301
251 3300005328 Ga0070676_10079208 Ga0070676_100792082 302
252 3300005331 Ga0070670_100000969 Ga0070670_1000009695 302
253 3300005333 Ga0070677_10000404 Ga0070677_100004047 302
254 3300005338 Ga0068868_100006071 Ga0068868_1000060716 302
255 3300005344 Ga0070661_100096294 Ga0070661_1000962943 302
256 3300005353 Ga0070669_100030443 Ga0070669_1000304432 302
257 3300005354 Ga0070675_100003585 Ga0070675_1000035856 302
258 3300005355 Ga0070671_100000797 Ga0070671_10000079710 302
259 3300005356 Ga0070674_100019910 Ga0070674_1000199102 302
260 3300005364 Ga0070673_100100131 Ga0070673_1001001312 302
261 3300005365 Ga0070688_100124927 Ga0070688_1001249272 302
262 3300005367 Ga0070667_100029704 Ga0070667_1000297043 302
263 3300005456 Ga0070678_100007524 Ga0070678_1000075242 302
264 3300005459 Ga0068867_100002774 Ga0068867_1000027748 302
265 3300005543 Ga0070672_100002473 Ga0070672_1000024733 302
266 3300005834 Ga0068851_10019128 Ga0068851_100191283 302
267 3300005841 Ga0068863_100087914 Ga0068863_1000879141 302
268 3300006237 Ga0097621_100004210 Ga0097621_1000042104 302
269 3300006358 Ga0068871_100053289 Ga0068871_1000532893 302
270 3300014745 Ga0157377_10119635 Ga0157377_101196352 302
271 3300014969 Ga0157376_10433814 Ga0157376_104338141 302
272 3300017792 Ga0163161_10007384 Ga0163161_100073842 302
273 3300025315 Ga0207697_10009765 Ga0207697_100097654 302
274 3300025907 Ga0207645_10046504 Ga0207645_100465043 302
275 3300025908 Ga0207643_10040284 Ga0207643_100402841 302
276 3300025920 Ga0207649_10067005 Ga0207649_100670053 302
277 3300025923 Ga0207681_10011633 Ga0207681_100116334 302
278 3300025925 Ga0207650_10001017 Ga0207650_100010177 302
279 3300025926 Ga0207659_10000361 Ga0207659_1000036111 302
280 3300025931 Ga0207644_10001639 Ga0207644_100016399 302
281 3300025940 Ga0207691_10000792 Ga0207691_1000079211 302
282 3300025942 Ga0207689_10554377 Ga0207689_105543771 302
283 3300025960 Ga0207651_10005459 Ga0207651_100054592 302
284 3300025986 Ga0207658_10022057 Ga0207658_100220573 302
285 3300026023 Ga0207677_10004058 Ga0207677_100040584 302
286 3300026089 Ga0207648_10002362 Ga0207648_1000236216 302
287 3300026121 Ga0207683_10001592 Ga0207683_100015928 302
288 3300028786 Ga0307517_10000131 Ga0307517_1000013187 302
289 3300028786 Ga0307517_10132638 Ga0307517_101326383 302
290 3300028794 Ga0307515_10236515 Ga0307515_102365151 302
291 3300031616 Ga0307508_10248494 Ga0307508_102484942 302
292 3300046471 Ga0495650_0116065 Ga0495650_0116065_24_932 302
293 3300046648 Ga0495611_0092835 Ga0495611_0092835_468_1376 302
294 3300046660 Ga0495625_0039100 Ga0495625_0039100_2296_3204 302
295 3300046694 Ga0495649_0009088 Ga0495649_0009088_1912_2820 302
296 3300046810 Ga0495660_0018541 Ga0495660_0018541_2903_3811 302
297 3300047443 Ga0495687_003410 Ga0495687_003410_9022_9951 302
298 3300053092 Ga0500583_0134559 Ga0500583_0134559_61_969 302
299 3300053134 Ga0500658_0008712 Ga0500658_0008712_1582_2511 302
300 3300006846 Ga0075430_100172230 Ga0075430_1001722302 303
301 3300007265 Ga0099794_10005855 Ga0099794_100058554 303
302 3300010159 Ga0099796_10008314 Ga0099796_100083142 303
303 3300027671 Ga0209588_1018032 Ga0209588_10180322 303
304 3300045051 Ga0451576_0115321 Ga0451576_0115321_800_1768 303
305 3300050509 nmdc:mga0qj67_196064_c1 nmdc:mga0qj67_196064_c1_351_1319 303
306 3300050509 nmdc:mga0qj67_84577_c1 nmdc:mga0qj67_84577_c1_350_1318 303
307 3300005355 Ga0070671_100036619 Ga0070671_1000366193 304
308 3300045051 Ga0451576_0035617 Ga0451576_0035617_30_1001 304
309 3300048905 Ga0496102_0001370 Ga0496102_0001370_19517_20455 304
310 3300005344 Ga0070661_100103036 Ga0070661_1001030362 305
311 3300005355 Ga0070671_100249823 Ga0070671_1002498232 305
312 3300005564 Ga0070664_100005824 Ga0070664_1000058246 305
313 3300013306 Ga0163162_10147145 Ga0163162_101471453 305
314 3300013307 Ga0157372_10125499 Ga0157372_101254993 305
315 3300013308 Ga0157375_10064265 Ga0157375_100642655 305
316 3300025931 Ga0207644_10062516 Ga0207644_100625163 305
317 3300025931 Ga0207644_10209105 Ga0207644_102091052 305
318 3300025945 Ga0207679_10004559 Ga0207679_100045591 305
319 3300025986 Ga0207658_10178249 Ga0207658_101782492 305
320 3300028800 Ga0265338_10009780 Ga0265338_100097805 305
321 3300030521 Ga0307511_10000037 Ga0307511_1000003716 305
322 3300031507 Ga0307509_10000034 Ga0307509_1000003446 305
323 3300046520 Ga0495637_0063128 Ga0495637_0063128_296_1249 305
324 3300046523 Ga0495644_0015418 Ga0495644_0015418_44_979 305
325 3300046665 Ga0495661_0139468 Ga0495661_0139468_160_1125 305
326 3300048091 Ga0495626_0003695 Ga0495626_0003695_1157_2122 305
327 3300048911 Ga0496108_0086839 Ga0496108_0086839_413_1360 305
328 3300048915 Ga0496112_0005035 Ga0496112_0005035_6729_7676 305
329 3300048916 Ga0496113_0032949 Ga0496113_0032949_2049_2996 305
330 3300005983 Ga0081540_1001170 Ga0081540_100117016 306
331 3300005841 Ga0068863_100304507 Ga0068863_1003045071 307
332 3300009553 Ga0105249_10004287 Ga0105249_100042872 307
333 3300005434 Ga0070709_10365773 Ga0070709_103657731 311
334 3300005435 Ga0070714_100167371 Ga0070714_1001673712 311
335 3300005436 Ga0070713_100136415 Ga0070713_1001364152 311
336 3300005546 Ga0070696_100080345 Ga0070696_1000803452 311
337 3300009093 Ga0105240_10011776 Ga0105240_100117762 311
338 3300025920 Ga0207649_10299695 Ga0207649_102996951 311
339 3300025928 Ga0207700_10128081 Ga0207700_101280812 311
340 3300025929 Ga0207664_10100405 Ga0207664_101004052 311
341 2162886012 MBSR1b_contig_2230756 MBSR1b_0847.00003210 313
342 3300005330 Ga0070690_100074715 Ga0070690_1000747152 313
343 3300005334 Ga0068869_100021797 Ga0068869_1000217973 313
344 3300005353 Ga0070669_100086347 Ga0070669_1000863472 313
345 3300005365 Ga0070688_100007485 Ga0070688_1000074855 313
346 3300005366 Ga0070659_100024370 Ga0070659_1000243702 313
347 3300005456 Ga0070678_100057069 Ga0070678_1000570691 313
348 3300005459 Ga0068867_100054959 Ga0068867_1000549592 313
349 3300005543 Ga0070672_100016482 Ga0070672_1000164822 313
350 3300005563 Ga0068855_100011776 Ga0068855_1000117767 313
351 3300005564 Ga0070664_100166574 Ga0070664_1001665742 313
352 3300005577 Ga0068857_100071588 Ga0068857_1000715882 313
353 3300005841 Ga0068863_100137351 Ga0068863_1001373512 313
354 3300005843 Ga0068860_100273753 Ga0068860_1002737531 313
355 3300005844 Ga0068862_100064903 Ga0068862_1000649034 313
356 3300006358 Ga0068871_100071103 Ga0068871_1000711031 313
357 3300009545 Ga0105237_10040771 Ga0105237_100407712 313
358 3300013105 Ga0157369_10091614 Ga0157369_100916142 313
359 3300013308 Ga0157375_10074790 Ga0157375_100747902 313
360 3300014969 Ga0157376_10069269 Ga0157376_100692692 313
361 3300025914 Ga0207671_10024553 Ga0207671_100245533 313
362 3300025923 Ga0207681_10013641 Ga0207681_100136413 313
363 3300025926 Ga0207659_10038935 Ga0207659_100389352 313
364 3300025938 Ga0207704_10299399 Ga0207704_102993991 313
365 3300025940 Ga0207691_10008859 Ga0207691_100088593 313
366 3300025942 Ga0207689_10023535 Ga0207689_100235355 313
367 3300025945 Ga0207679_10158885 Ga0207679_101588851 313
368 3300026075 Ga0207708_10148341 Ga0207708_101483412 313
369 3300026088 Ga0207641_10598243 Ga0207641_105982431 313
370 3300026089 Ga0207648_10137640 Ga0207648_101376401 313
371 3300026116 Ga0207674_10085526 Ga0207674_100855262 313
372 3300026121 Ga0207683_10008923 Ga0207683_100089237 313
373 3300028381 Ga0268264_10055764 Ga0268264_100557642 313
374 3300046472 Ga0495580_0179979 Ga0495580_0179979_486_1427 313

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00126

HTH_1

Bacterial regulatory helix-turn-helix protein, lysR family

73

132

0.96

PF03466

LysR_substrate

LysR substrate binding domain

158

362

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
2uyf-assembly1.cif.gz_A-2 single mutant f111l dntr from burkholderia sp. strain dnt in complex with thiocyanate 0.9446 88 300
5ae4-assembly1.cif.gz_B structures of inactive and activated dntr provide conclusive evidence for the mechanism of action of lysr transcription factors 0.9371 88 302
2y7r-assembly3.cif.gz_C dntr inducer binding domain 0.9362 90 302
2y84-assembly4.cif.gz_F dntr inducer binding domain 0.9332 89 302
2y7w-assembly2.cif.gz_C dntr inducer binding domain 0.9328 88 300
ID Description Score Start End Superfamily
af_P9WMF7_1_79_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9441 5 82 1.10.10.10
2y7wB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9316 89 300 3.40.190.10
af_P0ACR4_1_83_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9312 5 84 1.10.10.10
af_P30979_21_108_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9297 5 83 1.10.10.10
af_P37682_6_92_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9294 5 85 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A7T4KIP8-F1-model_v4 deleted 0.9615 88 302
AF-A0A2S3YSY6-F1-model_v4 HTH lysR-type domain-containing protein 0.9377 1 77 GO:0003700
AF-A0A7Y8HXQ6-F1-model_v4 LysR family transcriptional regulator 0.9355 5 83 GO:0000976
GO:0003700
AF-W1XG19-F1-model_v4 HTH-type transcriptional regulator abgR 0.9167 1 83 GO:0003700
GO:0005829
AF-A0A376JFC9-F1-model_v4 deleted 0.9143 5 85

Feature Viewer

pLDDT pTM Quality
88.32 0.69 Medium
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map