F426027

General Info

Members Datasets Scaffolds Average Seq Length
372 55 319 197

Family's Representative Sequence

Representative Sequence 3300009036|Ga0105244_10009650|Ga0105244_100096503
Length 192
Sequence MCQAQSLWLCYAFFFPRKGSGFYISFIYNKNLFYNGKTMPHSDLPFRALSVLHSARYLFNKHGFHNVGVDRIIEAAKVPKATFYNYFHSKERLIEMSLTFQKDGLKLEGLYHLPFKAIFEIAKTHPKAYQVVIDYRNWLIKEIYNLLLTANANASKQDAHMFLFVIDGAMVQLLDPSKPDERERLLEYFLLG

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2551306352 Acinetobacter sp. GG2 Isolate Rhizosphere
3 2639762793 Acinetobacter calcoaceticus GK1 Isolate Rhizosphere
4 2675903507 Acinetobacter calcoaceticus GK2 Isolate Unclassified
5 2773857761 Acinetobacter sp. 3664 Isolate Unclassified
6 2773857770 Acinetobacter sp. 3636 Isolate Unclassified
7 2919182534 Acinetobacter calcoaceticus 2589 Isolate Rhizosphere
8 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
9 3300005272 Switchgrass rhizosphere microbial communities from Buena Vista Grasslands Wildlife Area, Michigan, USA - BV2.1 v1 Metagenome Rhizosphere
10 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005473 Switchgrass rhizosphere microbial communities from Buena Vista Grasslands Wildlife Area, Michigan, USA - BV2.1 v2 (version 2) Metagenome Rhizosphere
13 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
14 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
15 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
16 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
17 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
18 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
19 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
20 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
21 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
22 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
23 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
24 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
25 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
26 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
34 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
36 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
37 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
38 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
39 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
40 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
41 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
42 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
43 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
44 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
45 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
46 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
47 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
48 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
49 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
50 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
51 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
52 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
53 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
54 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
55 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.4
Metatranscriptomes 0
Isolates 8.6

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.34
Nodule 0
Rhizoplane 0
Rhizosphere 91.94
Stem 0
Stem Tuber 0
Unclassified 6.72

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1544938 2162886007 Bacteria 1005
2 SwRhRL2b_contig_3497148 2162886007 Bacteria 5841
3 SwRhRL2b_contig_890297 2162886007 Bacteria 7219
4 Ga0058692_1000001 3300003856 Bacteria 834230
5 Ga0058692_1000010 3300003856 Bacteria 326761
6 Ga0058692_1000059 3300003856 Bacteria 98944
7 Ga0058692_1000287 3300003856 Bacteria 26283
8 Ga0065703_1000311 3300005272 Bacteria 49497
9 Ga0065704_10002990 3300005289 Bacteria 4456
10 Ga0065704_10005864 3300005289 Bacteria 3218
11 Ga0065704_10007403 3300005289 Bacteria 2496
12 Ga0065704_10016110 3300005289 Bacteria 1385
13 Ga0065704_10017090 3300005289 Bacteria 1413
14 Ga0065704_10071104 3300005289 Bacteria 13159
15 Ga0065704_10072215 3300005289 Bacteria 8925
16 Ga0065704_10076485 3300005289 Bacteria 5100
17 Ga0065704_10088850 3300005289 Bacteria 2897
18 Ga0065704_10097696 3300005289 Bacteria 2379
19 Ga0065704_10108987 3300005289 Bacteria 2014
20 Ga0065704_10117144 3300005289 Bacteria 1833
21 Ga0065704_10131964 3300005289 Bacteria 1618
22 Ga0065704_10165738 3300005289 Bacteria 1313
23 Ga0065704_10172069 3300005289 Bacteria 1278
24 Ga0065704_10173072 3300005289 Bacteria 1280
25 Ga0065704_10187024 3300005289 Bacteria 1205
26 Ga0065704_10198463 3300005289 Bacteria 1148
27 Ga0065704_10203187 3300005289 Bacteria 1137
28 Ga0065704_10203729 3300005289 Bacteria 1134
29 Ga0065704_10206998 3300005289 Bacteria 1121
30 Ga0065704_10218609 3300005289 Bacteria 1080
31 Ga0065704_10242389 3300005289 Bacteria 1008
32 Ga0065704_10275409 3300005289 Bacteria 931
33 Ga0070669_100039938 3300005353 Bacteria 3410
34 Ga0070669_100046600 3300005353 Bacteria 3162
35 Ga0074250_10195 3300005473 Bacteria 2739
36 Ga0074250_12344 3300005473 Bacteria 1244
37 Ga0070665_100049787 3300005548 Bacteria 4204
38 Ga0070665_100127750 3300005548 Bacteria 2545
39 Ga0070665_100164403 3300005548 Bacteria 2222
40 Ga0070665_100229392 3300005548 Bacteria 1857
41 Ga0070665_100798147 3300005548 Bacteria 957
42 Ga0075362_10018414 3300006177 Bacteria 2889
43 Ga0075362_10025283 3300006177 Bacteria 2526
44 Ga0075362_10035566 3300006177 Bacteria 2175
45 Ga0105251_10004980 3300009011 Bacteria 8836
46 Ga0105251_10016219 3300009011 Bacteria 4035
47 Ga0105251_10025102 3300009011 Bacteria 3052
48 Ga0105251_10053421 3300009011 Bacteria 1920
49 Ga0105251_10086669 3300009011 Bacteria 1442
50 Ga0105251_10110939 3300009011 Bacteria 1249
51 Ga0105251_10113923 3300009011 Bacteria 1230
52 Ga0105251_10120013 3300009011 Bacteria 1194
53 Ga0105251_10126948 3300009011 Bacteria 1157
54 Ga0105251_10136927 3300009011 Bacteria 1108
55 Ga0105251_10153815 3300009011 Bacteria 1038
56 Ga0105251_10156961 3300009011 Bacteria 1026
57 Ga0105251_10179001 3300009011 Bacteria 955
58 Ga0105244_10002487 3300009036 Bacteria 13876
59 Ga0105244_10003263 3300009036 Bacteria 11694
60 Ga0105244_10003641 3300009036 Bacteria 10917
61 Ga0105244_10005225 3300009036 Bacteria 8676
62 Ga0105244_10006543 3300009036 Bacteria 7517
63 Ga0105244_10006604 3300009036 Bacteria 7475
64 Ga0105244_10006751 3300009036 Bacteria 7380
65 Ga0105244_10007393 3300009036 Bacteria 6981
66 Ga0105244_10009650 3300009036 Bacteria 5913
67 Ga0105244_10020323 3300009036 Bacteria 3692
68 Ga0105244_10137155 3300009036 Bacteria 1178
69 Ga0105244_10138558 3300009036 Bacteria 1171
70 Ga0105244_10141990 3300009036 Bacteria 1154
71 Ga0105250_10001036 3300009092 Bacteria 15939
72 Ga0105250_10001324 3300009092 Bacteria 13539
73 Ga0105250_10001825 3300009092 Bacteria 11141
74 Ga0105250_10001884 3300009092 Bacteria 10903
75 Ga0105250_10001918 3300009092 Bacteria 10786
76 Ga0105250_10003753 3300009092 Bacteria 7137
77 Ga0105250_10003915 3300009092 Bacteria 6956
78 Ga0105250_10004084 3300009092 Bacteria 6787
79 Ga0105250_10005400 3300009092 Bacteria 5736
80 Ga0105250_10005572 3300009092 Bacteria 5632
81 Ga0105250_10010113 3300009092 Bacteria 3938
82 Ga0105250_10018462 3300009092 Bacteria 2824
83 Ga0105250_10021361 3300009092 Bacteria 2614
84 Ga0105250_10039546 3300009092 Bacteria 1891
85 Ga0105250_10086380 3300009092 Bacteria 1274
86 Ga0105250_10087282 3300009092 Bacteria 1267
87 Ga0105250_10142118 3300009092 Bacteria 995
88 Ga0105247_10000054 3300009101 Bacteria 134359
89 Ga0105247_10000097 3300009101 Bacteria 94693
90 Ga0105247_10000116 3300009101 Bacteria 78228
91 Ga0105247_10000472 3300009101 Bacteria 33737
92 Ga0105247_10000603 3300009101 Bacteria 29087
93 Ga0105243_10000005 3300009148 Bacteria 576265
94 Ga0105243_10000053 3300009148 Bacteria 137373
95 Ga0105243_10000072 3300009148 Bacteria 116929
96 Ga0105243_10000650 3300009148 Bacteria 34412
97 Ga0157373_10001110 3300013100 Bacteria 20659
98 Ga0157373_10003375 3300013100 Bacteria 12080
99 Ga0157373_10004952 3300013100 Bacteria 10009
100 Ga0157373_10006790 3300013100 Bacteria 8525
101 Ga0157373_10007636 3300013100 Bacteria 8032
102 Ga0157371_10002365 3300013102 Bacteria 18050
103 Ga0157371_10003180 3300013102 Bacteria 15082
104 Ga0157371_10003747 3300013102 Bacteria 13610
105 Ga0157371_10004258 3300013102 Bacteria 12584
106 Ga0157371_10009124 3300013102 Bacteria 7834
107 Ga0157371_10022078 3300013102 Bacteria 4668
108 Ga0157370_10002459 3300013104 Bacteria 22348
109 Ga0157370_10004151 3300013104 Bacteria 16766
110 Ga0157370_10020789 3300013104 Bacteria 6549
111 Ga0157370_10023572 3300013104 Bacteria 6108
112 Ga0157370_10035391 3300013104 Bacteria 4853
113 Ga0157370_10035731 3300013104 Bacteria 4827
114 Ga0157370_10041158 3300013104 Bacteria 4461
115 Ga0157370_10051355 3300013104 Bacteria 3939
116 Ga0157370_10072863 3300013104 Bacteria 3241
117 Ga0157370_10077050 3300013104 Bacteria 3141
118 Ga0157370_10244247 3300013104 Bacteria 1661
119 Ga0157370_10283500 3300013104 Bacteria 1530
120 Ga0157370_10512093 3300013104 Bacteria 1102
121 Ga0157370_10520977 3300013104 Bacteria 1091
122 Ga0157370_10579530 3300013104 Bacteria 1028
123 Ga0157370_10686514 3300013104 Bacteria 935
124 Ga0157370_10744844 3300013104 Bacteria 893
125 Ga0157370_10990630 3300013104 Bacteria 761
126 Ga0157372_10024646 3300013307 Bacteria 6539
127 Ga0157372_10083078 3300013307 Bacteria 3628
128 Ga0157372_10337260 3300013307 Bacteria 1756
129 Ga0182005_1035642 3300015265 Bacteria 1353
130 Ga0163161_10000514 3300017792 Bacteria 31589
131 Ga0163161_10001039 3300017792 Bacteria 21156
132 Ga0163161_10001442 3300017792 Bacteria 17573
133 Ga0163161_10002206 3300017792 Bacteria 14045
134 Ga0163161_10004682 3300017792 Bacteria 9514
135 Ga0163161_10004871 3300017792 Bacteria 9351
136 Ga0163161_10006685 3300017792 Bacteria 7981
137 Ga0163161_10009577 3300017792 Bacteria 6699
138 Ga0163161_10032699 3300017792 Bacteria 3716
139 Ga0163161_10072963 3300017792 Bacteria 2514
140 Ga0163161_10269299 3300017792 Bacteria 1332
141 Ga0207696_1000585 3300025711 Bacteria 28263
142 Ga0207696_1000660 3300025711 Bacteria 24610
143 Ga0207696_1000909 3300025711 Bacteria 18342
144 Ga0207696_1000970 3300025711 Bacteria 17420
145 Ga0207696_1001025 3300025711 Bacteria 16680
146 Ga0207696_1001387 3300025711 Bacteria 13245
147 Ga0207696_1001472 3300025711 Bacteria 12742
148 Ga0207696_1001641 3300025711 Bacteria 11765
149 Ga0207696_1001723 3300025711 Bacteria 11348
150 Ga0207696_1001905 3300025711 Bacteria 10642
151 Ga0207696_1001988 3300025711 Bacteria 10351
152 Ga0207696_1002734 3300025711 Bacteria 8405
153 Ga0207696_1003158 3300025711 Bacteria 7654
154 Ga0207696_1003330 3300025711 Bacteria 7392
155 Ga0207696_1004383 3300025711 Bacteria 6098
156 Ga0207696_1005512 3300025711 Bacteria 5239
157 Ga0207696_1009980 3300025711 Bacteria 3508
158 Ga0207696_1011604 3300025711 Bacteria 3163
159 Ga0207696_1012100 3300025711 Bacteria 3066
160 Ga0207696_1012693 3300025711 Bacteria 2969
161 Ga0207696_1013898 3300025711 Bacteria 2780
162 Ga0207696_1016898 3300025711 Bacteria 2430
163 Ga0207696_1038308 3300025711 Bacteria 1415
164 Ga0207696_1049192 3300025711 Bacteria 1210
165 Ga0207696_1097268 3300025711 Bacteria 804
166 Ga0207655_1000112 3300025728 Bacteria 170624
167 Ga0207655_1000181 3300025728 Bacteria 112734
168 Ga0207655_1000324 3300025728 Bacteria 70419
169 Ga0207655_1000470 3300025728 Bacteria 52075
170 Ga0207655_1000493 3300025728 Bacteria 50835
171 Ga0207655_1000727 3300025728 Bacteria 37315
172 Ga0207655_1001366 3300025728 Bacteria 22847
173 Ga0207655_1001419 3300025728 Bacteria 22229
174 Ga0207655_1001443 3300025728 Bacteria 22027
175 Ga0207655_1003884 3300025728 Bacteria 10866
176 Ga0207655_1026176 3300025728 Bacteria 2806
177 Ga0207655_1040844 3300025728 Bacteria 1995
178 Ga0207655_1043215 3300025728 Bacteria 1909
179 Ga0207713_1001293 3300025735 Bacteria 20611
180 Ga0207713_1002180 3300025735 Bacteria 14515
181 Ga0207713_1002246 3300025735 Bacteria 14285
182 Ga0207713_1004005 3300025735 Bacteria 9755
183 Ga0207713_1004540 3300025735 Bacteria 8986
184 Ga0207713_1004769 3300025735 Bacteria 8716
185 Ga0207713_1005602 3300025735 Bacteria 7818
186 Ga0207713_1021253 3300025735 Bacteria 3117
187 Ga0207713_1033572 3300025735 Bacteria 2240
188 Ga0207713_1044493 3300025735 Bacteria 1823
189 Ga0207713_1051411 3300025735 Bacteria 1638
190 Ga0207713_1074763 3300025735 Bacteria 1238
191 Ga0207713_1074812 3300025735 Bacteria 1238
192 Ga0207713_1080797 3300025735 Bacteria 1170
193 Ga0207710_10000005 3300025900 Bacteria 607066
194 Ga0207710_10000009 3300025900 Bacteria 485205
195 Ga0207710_10000100 3300025900 Bacteria 111028
196 Ga0207710_10000132 3300025900 Bacteria 87481
197 Ga0207710_10006054 3300025900 Bacteria 5184
198 Ga0207710_10066626 3300025900 Bacteria 1643
199 Ga0207695_10215720 3300025913 Bacteria 1828
200 Ga0207695_10520163 3300025913 Bacteria 1071
201 Ga0207681_10034756 3300025923 Bacteria 3316
202 Ga0207681_10160843 3300025923 Bacteria 1692
203 Ga0207709_10000001 3300025935 Bacteria 2228154
204 Ga0209371_1000006 3300027312 Bacteria 1055642
205 Ga0209371_1000008 3300027312 Bacteria 1024606
206 Ga0268266_10050261 3300028379 Bacteria 3577
207 Ga0268266_10087456 3300028379 Bacteria 2726
208 Ga0268266_10132518 3300028379 Bacteria 2230
209 Ga0268266_10551865 3300028379 Bacteria 1104
210 Ga0268266_10728638 3300028379 Bacteria 956
211 Ga0268266_10931598 3300028379 Bacteria 840
212 Ga0268256_1000007 3300030500 Bacteria 1055326
213 Ga0268256_1000009 3300030500 Bacteria 1022625
214 Ga0439466_0000326 3300041411 Bacteria 18289
215 Ga0439466_0000382 3300041411 Bacteria 16953
216 Ga0439466_0000734 3300041411 Bacteria 12414
217 Ga0439466_0000792 3300041411 Bacteria 12021
218 Ga0439466_0001223 3300041411 Bacteria 9989
219 Ga0439466_0008838 3300041411 Bacteria 3789
220 Ga0439466_0011760 3300041411 Bacteria 3232
221 Ga0439432_009340 3300042006 Bacteria 3423
222 Ga0439432_016323 3300042006 Bacteria 2500
223 Ga0495627_000874 3300046453 Bacteria 21347
224 Ga0495627_002304 3300046453 Bacteria 9410
225 Ga0495627_017945 3300046453 Bacteria 2396
226 Ga0495638_0000459 3300046460 Bacteria 48864
227 Ga0495638_0001860 3300046460 Bacteria 18270
228 Ga0495638_0005075 3300046460 Bacteria 9866
229 Ga0495638_0007207 3300046460 Bacteria 7998
230 Ga0495638_0015903 3300046460 Bacteria 5042
231 Ga0495607_0000126 3300046501 Bacteria 80886
232 Ga0495607_0002107 3300046501 Bacteria 16612
233 Ga0495607_0003703 3300046501 Bacteria 11590
234 Ga0495607_0004474 3300046501 Bacteria 10251
235 Ga0495607_0004868 3300046501 Bacteria 9787
236 Ga0495607_0004887 3300046501 Bacteria 9754
237 Ga0495607_0004914 3300046501 Bacteria 9722
238 Ga0495607_0006706 3300046501 Bacteria 8061
239 Ga0495607_0012519 3300046501 Bacteria 5595
240 Ga0495607_0013042 3300046501 Bacteria 5463
241 Ga0495607_0024110 3300046501 Bacteria 3797
242 Ga0495607_0034392 3300046501 Bacteria 3074
243 Ga0495607_0036947 3300046501 Bacteria 2937
244 Ga0495606_0031490 3300046507 Bacteria 3687
245 Ga0495606_0080410 3300046507 Bacteria 2028
246 Ga0495606_0106658 3300046507 Bacteria 1696
247 Ga0495606_0221448 3300046507 Bacteria 1066
248 Ga0495632_0001073 3300046519 Bacteria 23463
249 Ga0495632_0007433 3300046519 Bacteria 6880
250 Ga0495632_0007505 3300046519 Bacteria 6833
251 Ga0495632_0012219 3300046519 Bacteria 4960
252 Ga0495632_0017655 3300046519 Bacteria 3934
253 Ga0495632_0018267 3300046519 Bacteria 3851
254 Ga0495632_0021851 3300046519 Bacteria 3439
255 Ga0495632_0076449 3300046519 Bacteria 1601
256 Ga0495632_0094534 3300046519 Bacteria 1413
257 Ga0495632_0141992 3300046519 Bacteria 1113
258 Ga0495632_0242350 3300046519 Bacteria 810
259 Ga0495643_0002307 3300046522 Bacteria 15392
260 Ga0495643_0003935 3300046522 Bacteria 10640
261 Ga0495643_0005210 3300046522 Bacteria 8857
262 Ga0495643_0005987 3300046522 Bacteria 8116
263 Ga0495643_0014560 3300046522 Bacteria 4676
264 Ga0495643_0017676 3300046522 Bacteria 4162
265 Ga0495643_0027110 3300046522 Bacteria 3223
266 Ga0495643_0056772 3300046522 Bacteria 2088
267 Ga0495663_0000395 3300046525 Bacteria 16139
268 Ga0495663_0000489 3300046525 Bacteria 14369
269 Ga0495663_0000579 3300046525 Bacteria 12867
270 Ga0495663_0000592 3300046525 Bacteria 12705
271 Ga0495663_0001483 3300046525 Bacteria 7384
272 Ga0495663_0001825 3300046525 Bacteria 6577
273 Ga0495663_0002262 3300046525 Bacteria 5853
274 Ga0495663_0002376 3300046525 Bacteria 5665
275 Ga0495663_0002961 3300046525 Bacteria 4994
276 Ga0495663_0007641 3300046525 Bacteria 2990
277 Ga0495663_0015237 3300046525 Bacteria 2163
278 Ga0495663_0016339 3300046525 Bacteria 2097
279 Ga0495663_0019739 3300046525 Bacteria 1931
280 Ga0495654_0040396 3300046530 Bacteria 2325
281 Ga0495654_0069715 3300046530 Bacteria 1669
282 Ga0495654_0075429 3300046530 Bacteria 1591
283 Ga0495654_0119883 3300046530 Bacteria 1192
284 Ga0495633_0002406 3300046558 Bacteria 13224
285 Ga0495633_0006075 3300046558 Bacteria 7237
286 Ga0495633_0013080 3300046558 Bacteria 4387
287 Ga0495633_0016377 3300046558 Bacteria 3823
288 Ga0495633_0021924 3300046558 Bacteria 3188
289 Ga0495633_0042302 3300046558 Bacteria 2164
290 Ga0495661_0006990 3300046665 Bacteria 7890
291 Ga0495661_0049265 3300046665 Bacteria 2555
292 Ga0495661_0068574 3300046665 Bacteria 2080
293 Ga0495649_0003355 3300046694 Bacteria 10865
294 Ga0495649_0005412 3300046694 Bacteria 8125
295 Ga0495649_0019530 3300046694 Bacteria 3807
296 Ga0495649_0031241 3300046694 Bacteria 2937
297 Ga0495649_0049512 3300046694 Bacteria 2282
298 Ga0495681_0004686 3300047470 Bacteria 9274
299 Ga0495681_0006772 3300047470 Bacteria 7456
300 Ga0495681_0009490 3300047470 Bacteria 5988
301 Ga0495681_0021878 3300047470 Bacteria 3434
302 Ga0495681_0027559 3300047470 Bacteria 2937
303 Ga0495681_0090319 3300047470 Bacteria 1353
304 Ga0496116_0014202 3300048919 Bacteria 6373
305 Ga0496116_0026881 3300048919 Bacteria 4198
306 Ga0496116_0044874 3300048919 Bacteria 2997
307 Ga0496116_0085092 3300048919 Bacteria 1945
308 Ga0496119_0095017 3300048922 Bacteria 1685
309 Ga0496122_0053425 3300048925 Bacteria 3046
310 Ga0496122_0103662 3300048925 Bacteria 1892
311 Ga0496123_0147522 3300048926 Bacteria 1275
312 Ga0495682_0000129 3300049460 Bacteria 65692
313 Ga0495682_0001380 3300049460 Bacteria 13265
314 Ga0495682_0002047 3300049460 Bacteria 9894
315 Ga0495682_0003136 3300049460 Bacteria 7472
316 Ga0495682_0005614 3300049460 Bacteria 5189
317 Ga0495682_0013338 3300049460 Bacteria 3130
318 nmdc:mga03683_177016_c1 3300050489 Bacteria 972
319 nmdc:mga03683_51556_c1 3300050489 Bacteria 1718

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009036 Ga0105244_10009650 Ga0105244_100096503 154
2 3300025735 Ga0207713_1002180 Ga0207713_10021809 172
3 3300041411 Ga0439466_0001223 Ga0439466_0001223_1817_2446 175
4 3300013100 Ga0157373_10003375 Ga0157373_100033759 179
5 iso_pu_bacteria 2773857761 2774388123 179
6 3300003856 Ga0058692_1000010 Ga0058692_1000010209 180
7 3300005289 Ga0065704_10071104 Ga0065704_100711048 180
8 3300005548 Ga0070665_100127750 Ga0070665_1001277502 180
9 3300009011 Ga0105251_10025102 Ga0105251_100251023 180
10 3300009036 Ga0105244_10005225 Ga0105244_100052254 180
11 3300009092 Ga0105250_10003915 Ga0105250_100039158 180
12 3300009092 Ga0105250_10142118 Ga0105250_101421182 180
13 3300009101 Ga0105247_10000472 Ga0105247_1000047224 180
14 3300013102 Ga0157371_10003747 Ga0157371_100037479 180
15 3300013104 Ga0157370_10020789 Ga0157370_100207891 180
16 3300013104 Ga0157370_10579530 Ga0157370_105795301 180
17 3300013104 Ga0157370_10744844 Ga0157370_107448441 180
18 3300013104 Ga0157370_10990630 Ga0157370_109906301 180
19 3300013307 Ga0157372_10083078 Ga0157372_100830783 180
20 3300017792 Ga0163161_10004682 Ga0163161_100046822 180
21 3300025711 Ga0207696_1000970 Ga0207696_100097012 180
22 3300025711 Ga0207696_1005512 Ga0207696_10055124 180
23 3300025728 Ga0207655_1026176 Ga0207655_10261762 180
24 3300025900 Ga0207710_10000009 Ga0207710_1000000982 180
25 3300027312 Ga0209371_1000006 Ga0209371_1000006781 180
26 3300028379 Ga0268266_10087456 Ga0268266_100874562 180
27 3300030500 Ga0268256_1000007 Ga0268256_1000007781 180
28 3300041411 Ga0439466_0000792 Ga0439466_0000792_4067_4687 180
29 3300048925 Ga0496122_0053425 Ga0496122_0053425_1519_2073 180
30 iso_pu_bacteria 2639762793 2640733755 180
31 iso_pu_bacteria 2639762793 2640734381 180
32 iso_pu_bacteria 2675903507 2678231302 180
33 iso_pu_bacteria 2773857761 2774388025 180
34 iso_pu_bacteria 2773857770 2774437186 180
35 iso_pu_bacteria 2773857770 2774437247 180
36 iso_pu_bacteria 2773857770 2774437287 180
37 iso_pu_bacteria 2773857770 2774438646 180
38 iso_pu_bacteria 2919182534 2919183619 180
39 iso_pu_bacteria 2919182534 2919183656 180
40 iso_pu_bacteria 2551306352 2552746945 181
41 iso_pu_bacteria 2551306352 2552748388 181
42 iso_pu_bacteria 2639762793 2640733851 181
43 iso_pu_bacteria 2639762793 2640736809 181
44 iso_pu_bacteria 2675903507 2678230198 181
45 iso_pu_bacteria 2675903507 2678231363 181
46 iso_pu_bacteria 2675903507 2678231973 181
47 iso_pu_bacteria 2773857761 2774388614 181
48 iso_pu_bacteria 2773857761 2774390723 181
49 iso_pu_bacteria 2773857770 2774438244 181
50 iso_pu_bacteria 2773857770 2774438629 181
51 iso_pu_bacteria 2773857770 2774438726 181
52 iso_pu_bacteria 2919182534 2919182594 181
53 iso_pu_bacteria 2919182534 2919183176 181
54 iso_pu_bacteria 2919182534 2919183380 181
55 iso_pu_bacteria 2919182534 2919183630 181
56 iso_pu_bacteria 2919182534 2919183749 181
57 iso_pu_bacteria 2919182534 2919184877 181
58 2162886007 SwRhRL2b_contig_3497148 SwRhRL2b_0827.00000800 182
59 2162886007 SwRhRL2b_contig_890297 SwRhRL2b_0188.00005980 182
60 3300003856 Ga0058692_1000059 Ga0058692_100005961 182
61 3300005289 Ga0065704_10072215 Ga0065704_1007221511 182
62 3300006177 Ga0075362_10018414 Ga0075362_100184141 182
63 3300009011 Ga0105251_10110939 Ga0105251_101109392 182
64 3300009036 Ga0105244_10003641 Ga0105244_100036411 182
65 3300009092 Ga0105250_10001036 Ga0105250_100010363 182
66 3300009092 Ga0105250_10001918 Ga0105250_100019181 182
67 3300009101 Ga0105247_10000116 Ga0105247_100001161 182
68 3300013100 Ga0157373_10001110 Ga0157373_100011106 182
69 3300013100 Ga0157373_10004952 Ga0157373_100049528 182
70 3300013102 Ga0157371_10002365 Ga0157371_100023659 182
71 3300013104 Ga0157370_10002459 Ga0157370_100024592 182
72 3300013104 Ga0157370_10004151 Ga0157370_100041515 182
73 3300013104 Ga0157370_10041158 Ga0157370_100411582 182
74 3300013104 Ga0157370_10072863 Ga0157370_100728635 182
75 3300025711 Ga0207696_1000909 Ga0207696_100090914 182
76 3300025711 Ga0207696_1001988 Ga0207696_10019889 182
77 3300025728 Ga0207655_1000324 Ga0207655_10003241 182
78 3300025728 Ga0207655_1003884 Ga0207655_10038841 182
79 3300025900 Ga0207710_10006054 Ga0207710_100060542 182
80 3300027312 Ga0209371_1000006 Ga0209371_100000658 182
81 3300030500 Ga0268256_1000007 Ga0268256_100000758 182
82 3300042006 Ga0439432_009340 Ga0439432_009340_1494_2042 182
83 3300048919 Ga0496116_0026881 Ga0496116_0026881_250_798 182
84 3300009011 Ga0105251_10016219 Ga0105251_100162195 183
85 3300009011 Ga0105251_10179001 Ga0105251_101790012 183
86 3300013100 Ga0157373_10006790 Ga0157373_100067906 183
87 3300013102 Ga0157371_10003180 Ga0157371_100031803 183
88 3300025735 Ga0207713_1002246 Ga0207713_10022466 183
89 3300041411 Ga0439466_0011760 Ga0439466_0011760_1791_2432 183
90 3300046460 Ga0495638_0015903 Ga0495638_0015903_1488_2126 183
91 3300046501 Ga0495607_0004474 Ga0495607_0004474_816_1367 183
92 3300048919 Ga0496116_0044874 Ga0496116_0044874_1926_2576 183
93 3300048925 Ga0496122_0103662 Ga0496122_0103662_1232_1855 183
94 3300003856 Ga0058692_1000001 Ga0058692_1000001575 184
95 3300003856 Ga0058692_1000287 Ga0058692_10002875 184
96 3300005289 Ga0065704_10002990 Ga0065704_100029906 184
97 3300005289 Ga0065704_10005864 Ga0065704_100058644 184
98 3300005289 Ga0065704_10007403 Ga0065704_100074032 184
99 3300005289 Ga0065704_10017090 Ga0065704_100170901 184
100 3300005289 Ga0065704_10076485 Ga0065704_100764855 184
101 3300005289 Ga0065704_10097696 Ga0065704_100976963 184
102 3300005289 Ga0065704_10108987 Ga0065704_101089872 184
103 3300005289 Ga0065704_10117144 Ga0065704_101171442 184
104 3300005289 Ga0065704_10131964 Ga0065704_101319642 184
105 3300005289 Ga0065704_10165738 Ga0065704_101657382 184
106 3300005289 Ga0065704_10173072 Ga0065704_101730721 184
107 3300005289 Ga0065704_10187024 Ga0065704_101870242 184
108 3300005289 Ga0065704_10275409 Ga0065704_102754091 184
109 3300005353 Ga0070669_100039938 Ga0070669_1000399385 184
110 3300005353 Ga0070669_100046600 Ga0070669_1000466003 184
111 3300005473 Ga0074250_10195 Ga0074250_101953 184
112 3300005548 Ga0070665_100229392 Ga0070665_1002293922 184
113 3300005548 Ga0070665_100798147 Ga0070665_1007981472 184
114 3300009011 Ga0105251_10086669 Ga0105251_100866691 184
115 3300009011 Ga0105251_10153815 Ga0105251_101538152 184
116 3300009011 Ga0105251_10156961 Ga0105251_101569611 184
117 3300009036 Ga0105244_10003263 Ga0105244_1000326314 184
118 3300009036 Ga0105244_10141990 Ga0105244_101419902 184
119 3300009092 Ga0105250_10001324 Ga0105250_1000132413 184
120 3300009092 Ga0105250_10001825 Ga0105250_1000182516 184
121 3300009092 Ga0105250_10004084 Ga0105250_100040844 184
122 3300009092 Ga0105250_10010113 Ga0105250_100101134 184
123 3300009092 Ga0105250_10018462 Ga0105250_100184622 184
124 3300009092 Ga0105250_10086380 Ga0105250_100863802 184
125 3300009101 Ga0105247_10000054 Ga0105247_1000005484 184
126 3300009148 Ga0105243_10000005 Ga0105243_10000005502 184
127 3300009148 Ga0105243_10000650 Ga0105243_1000065016 184
128 3300013102 Ga0157371_10004258 Ga0157371_100042588 184
129 3300013102 Ga0157371_10022078 Ga0157371_100220782 184
130 3300013104 Ga0157370_10023572 Ga0157370_100235721 184
131 3300013104 Ga0157370_10077050 Ga0157370_100770504 184
132 3300013104 Ga0157370_10283500 Ga0157370_102835002 184
133 3300013104 Ga0157370_10686514 Ga0157370_106865141 184
134 3300013307 Ga0157372_10024646 Ga0157372_100246464 184
135 3300017792 Ga0163161_10000514 Ga0163161_100005141 184
136 3300017792 Ga0163161_10001039 Ga0163161_1000103911 184
137 3300017792 Ga0163161_10032699 Ga0163161_100326996 184
138 3300025711 Ga0207696_1000585 Ga0207696_10005855 184
139 3300025711 Ga0207696_1000660 Ga0207696_10006607 184
140 3300025711 Ga0207696_1001025 Ga0207696_10010258 184
141 3300025711 Ga0207696_1001472 Ga0207696_10014723 184
142 3300025711 Ga0207696_1002734 Ga0207696_10027341 184
143 3300025711 Ga0207696_1003158 Ga0207696_10031585 184
144 3300025711 Ga0207696_1011604 Ga0207696_10116043 184
145 3300025711 Ga0207696_1012100 Ga0207696_10121002 184
146 3300025711 Ga0207696_1012693 Ga0207696_10126933 184
147 3300025711 Ga0207696_1013898 Ga0207696_10138982 184
148 3300025711 Ga0207696_1049192 Ga0207696_10491922 184
149 3300025711 Ga0207696_1097268 Ga0207696_10972681 184
150 3300025728 Ga0207655_1000112 Ga0207655_100011278 184
151 3300025728 Ga0207655_1000181 Ga0207655_100018122 184
152 3300025728 Ga0207655_1000181 Ga0207655_100018164 184
153 3300025728 Ga0207655_1043215 Ga0207655_10432152 184
154 3300025735 Ga0207713_1001293 Ga0207713_100129316 184
155 3300025735 Ga0207713_1004769 Ga0207713_10047692 184
156 3300025735 Ga0207713_1005602 Ga0207713_10056022 184
157 3300025735 Ga0207713_1033572 Ga0207713_10335723 184
158 3300025735 Ga0207713_1080797 Ga0207713_10807972 184
159 3300025900 Ga0207710_10000009 Ga0207710_1000000950 184
160 3300025900 Ga0207710_10066626 Ga0207710_100666262 184
161 3300025913 Ga0207695_10520163 Ga0207695_105201631 184
162 3300025923 Ga0207681_10034756 Ga0207681_100347561 184
163 3300025923 Ga0207681_10160843 Ga0207681_101608431 184
164 3300025935 Ga0207709_10000001 Ga0207709_10000001259 184
165 3300025935 Ga0207709_10000001 Ga0207709_1000000157 184
166 3300025935 Ga0207709_10000001 Ga0207709_10000001861 184
167 3300025935 Ga0207709_10000001 Ga0207709_10000001924 184
168 3300027312 Ga0209371_1000006 Ga0209371_1000006999 184
169 3300027312 Ga0209371_1000008 Ga0209371_1000008698 184
170 3300028379 Ga0268266_10551865 Ga0268266_105518651 184
171 3300028379 Ga0268266_10728638 Ga0268266_107286381 184
172 3300028379 Ga0268266_10931598 Ga0268266_109315981 184
173 3300030500 Ga0268256_1000007 Ga0268256_1000007999 184
174 3300030500 Ga0268256_1000009 Ga0268256_1000009698 184
175 3300041411 Ga0439466_0000326 Ga0439466_0000326_10370_10924 184
176 3300041411 Ga0439466_0000734 Ga0439466_0000734_2629_3267 184
177 3300042006 Ga0439432_016323 Ga0439432_016323_1640_2290 184
178 3300046453 Ga0495627_017945 Ga0495627_017945_532_1086 184
179 3300046460 Ga0495638_0000459 Ga0495638_0000459_47263_47817 184
180 3300046460 Ga0495638_0005075 Ga0495638_0005075_5861_6511 184
181 3300046501 Ga0495607_0004868 Ga0495607_0004868_6303_6857 184
182 3300046501 Ga0495607_0004887 Ga0495607_0004887_4905_5459 184
183 3300046501 Ga0495607_0013042 Ga0495607_0013042_1114_1782 184
184 3300046501 Ga0495607_0034392 Ga0495607_0034392_1323_1973 184
185 3300046507 Ga0495606_0031490 Ga0495606_0031490_1424_2071 184
186 3300046507 Ga0495606_0221448 Ga0495606_0221448_386_940 184
187 3300046519 Ga0495632_0012219 Ga0495632_0012219_2967_3629 184
188 3300046519 Ga0495632_0018267 Ga0495632_0018267_2027_2695 184
189 3300046519 Ga0495632_0141992 Ga0495632_0141992_358_912 184
190 3300046522 Ga0495643_0003935 Ga0495643_0003935_9604_10158 184
191 3300046522 Ga0495643_0017676 Ga0495643_0017676_2475_3029 184
192 3300046522 Ga0495643_0056772 Ga0495643_0056772_623_1291 184
193 3300046525 Ga0495663_0000395 Ga0495663_0000395_11457_12011 184
194 3300046525 Ga0495663_0000489 Ga0495663_0000489_689_1363 184
195 3300046525 Ga0495663_0000579 Ga0495663_0000579_11336_11890 184
196 3300046525 Ga0495663_0000592 Ga0495663_0000592_306_947 184
197 3300046525 Ga0495663_0001483 Ga0495663_0001483_6407_6961 184
198 3300046525 Ga0495663_0002262 Ga0495663_0002262_3421_3975 184
199 3300046525 Ga0495663_0002376 Ga0495663_0002376_910_1557 184
200 3300046525 Ga0495663_0007641 Ga0495663_0007641_1482_2036 184
201 3300046525 Ga0495663_0016339 Ga0495663_0016339_654_1208 184
202 3300046530 Ga0495654_0069715 Ga0495654_0069715_149_787 184
203 3300046530 Ga0495654_0075429 Ga0495654_0075429_1012_1566 184
204 3300046558 Ga0495633_0002406 Ga0495633_0002406_7141_7695 184
205 3300046558 Ga0495633_0013080 Ga0495633_0013080_1011_1685 184
206 3300046558 Ga0495633_0042302 Ga0495633_0042302_686_1240 184
207 3300046665 Ga0495661_0006990 Ga0495661_0006990_349_1023 184
208 3300046665 Ga0495661_0068574 Ga0495661_0068574_473_1111 184
209 3300046694 Ga0495649_0005412 Ga0495649_0005412_4371_5021 184
210 3300046694 Ga0495649_0019530 Ga0495649_0019530_473_1138 184
211 3300047470 Ga0495681_0004686 Ga0495681_0004686_2800_3354 184
212 3300049460 Ga0495682_0003136 Ga0495682_0003136_2843_3397 184
213 iso_pu_bacteria 2773857761 2774388705 184
214 2162886007 SwRhRL2b_contig_1544938 SwRhRL2b_0356.00006030 185
215 3300003856 Ga0058692_1000001 Ga0058692_1000001783 185
216 3300003856 Ga0058692_1000059 Ga0058692_100005926 185
217 3300005272 Ga0065703_1000311 Ga0065703_100031142 185
218 3300005289 Ga0065704_10016110 Ga0065704_100161102 185
219 3300005289 Ga0065704_10088850 Ga0065704_100888502 185
220 3300005289 Ga0065704_10172069 Ga0065704_101720691 185
221 3300005289 Ga0065704_10198463 Ga0065704_101984632 185
222 3300005289 Ga0065704_10203187 Ga0065704_102031871 185
223 3300005289 Ga0065704_10203729 Ga0065704_102037291 185
224 3300005289 Ga0065704_10206998 Ga0065704_102069981 185
225 3300005289 Ga0065704_10218609 Ga0065704_102186091 185
226 3300005289 Ga0065704_10242389 Ga0065704_102423892 185
227 3300005473 Ga0074250_12344 Ga0074250_123442 185
228 3300005548 Ga0070665_100049787 Ga0070665_1000497874 185
229 3300005548 Ga0070665_100164403 Ga0070665_1001644032 185
230 3300006177 Ga0075362_10025283 Ga0075362_100252834 185
231 3300006177 Ga0075362_10035566 Ga0075362_100355664 185
232 3300009011 Ga0105251_10004980 Ga0105251_100049802 185
233 3300009011 Ga0105251_10053421 Ga0105251_100534211 185
234 3300009011 Ga0105251_10113923 Ga0105251_101139232 185
235 3300009011 Ga0105251_10120013 Ga0105251_101200131 185
236 3300009011 Ga0105251_10126948 Ga0105251_101269482 185
237 3300009011 Ga0105251_10136927 Ga0105251_101369271 185
238 3300009036 Ga0105244_10002487 Ga0105244_100024873 185
239 3300009036 Ga0105244_10006543 Ga0105244_100065438 185
240 3300009036 Ga0105244_10006604 Ga0105244_100066048 185
241 3300009036 Ga0105244_10006751 Ga0105244_100067518 185
242 3300009036 Ga0105244_10007393 Ga0105244_100073934 185
243 3300009036 Ga0105244_10020323 Ga0105244_100203233 185
244 3300009036 Ga0105244_10137155 Ga0105244_101371552 185
245 3300009036 Ga0105244_10138558 Ga0105244_101385582 185
246 3300009092 Ga0105250_10001825 Ga0105250_100018255 185
247 3300009092 Ga0105250_10001884 Ga0105250_100018844 185
248 3300009092 Ga0105250_10003753 Ga0105250_100037532 185
249 3300009092 Ga0105250_10005400 Ga0105250_100054002 185
250 3300009092 Ga0105250_10005572 Ga0105250_100055726 185
251 3300009092 Ga0105250_10021361 Ga0105250_100213614 185
252 3300009092 Ga0105250_10039546 Ga0105250_100395462 185
253 3300009092 Ga0105250_10087282 Ga0105250_100872822 185
254 3300009101 Ga0105247_10000097 Ga0105247_1000009760 185
255 3300009101 Ga0105247_10000603 Ga0105247_1000060313 185
256 3300009148 Ga0105243_10000053 Ga0105243_1000005346 185
257 3300009148 Ga0105243_10000072 Ga0105243_1000007252 185
258 3300013100 Ga0157373_10007636 Ga0157373_100076369 185
259 3300013102 Ga0157371_10009124 Ga0157371_100091244 185
260 3300013104 Ga0157370_10035391 Ga0157370_100353912 185
261 3300013104 Ga0157370_10035731 Ga0157370_100357311 185
262 3300013104 Ga0157370_10051355 Ga0157370_100513552 185
263 3300013104 Ga0157370_10244247 Ga0157370_102442471 185
264 3300013104 Ga0157370_10512093 Ga0157370_105120931 185
265 3300013104 Ga0157370_10520977 Ga0157370_105209771 185
266 3300013307 Ga0157372_10337260 Ga0157372_103372602 185
267 3300015265 Ga0182005_1035642 Ga0182005_10356421 185
268 3300017792 Ga0163161_10001442 Ga0163161_100014423 185
269 3300017792 Ga0163161_10002206 Ga0163161_1000220614 185
270 3300017792 Ga0163161_10004871 Ga0163161_100048715 185
271 3300017792 Ga0163161_10006685 Ga0163161_100066858 185
272 3300017792 Ga0163161_10009577 Ga0163161_100095778 185
273 3300017792 Ga0163161_10072963 Ga0163161_100729632 185
274 3300017792 Ga0163161_10269299 Ga0163161_102692991 185
275 3300025711 Ga0207696_1001025 Ga0207696_100102518 185
276 3300025711 Ga0207696_1001387 Ga0207696_10013875 185
277 3300025711 Ga0207696_1001641 Ga0207696_100164114 185
278 3300025711 Ga0207696_1001723 Ga0207696_10017238 185
279 3300025711 Ga0207696_1001905 Ga0207696_100190511 185
280 3300025711 Ga0207696_1003330 Ga0207696_10033302 185
281 3300025711 Ga0207696_1004383 Ga0207696_10043832 185
282 3300025711 Ga0207696_1009980 Ga0207696_10099806 185
283 3300025711 Ga0207696_1016898 Ga0207696_10168982 185
284 3300025711 Ga0207696_1038308 Ga0207696_10383082 185
285 3300025728 Ga0207655_1000112 Ga0207655_100011295 185
286 3300025728 Ga0207655_1000181 Ga0207655_100018140 185
287 3300025728 Ga0207655_1000470 Ga0207655_100047015 185
288 3300025728 Ga0207655_1000493 Ga0207655_100049314 185
289 3300025728 Ga0207655_1000727 Ga0207655_100072715 185
290 3300025728 Ga0207655_1001366 Ga0207655_100136616 185
291 3300025728 Ga0207655_1001419 Ga0207655_10014192 185
292 3300025728 Ga0207655_1001443 Ga0207655_10014432 185
293 3300025728 Ga0207655_1040844 Ga0207655_10408442 185
294 3300025735 Ga0207713_1004005 Ga0207713_10040055 185
295 3300025735 Ga0207713_1004540 Ga0207713_10045402 185
296 3300025735 Ga0207713_1021253 Ga0207713_10212531 185
297 3300025735 Ga0207713_1044493 Ga0207713_10444931 185
298 3300025735 Ga0207713_1051411 Ga0207713_10514112 185
299 3300025735 Ga0207713_1074763 Ga0207713_10747632 185
300 3300025735 Ga0207713_1074812 Ga0207713_10748122 185
301 3300025900 Ga0207710_10000005 Ga0207710_10000005299 185
302 3300025900 Ga0207710_10000100 Ga0207710_1000010052 185
303 3300025900 Ga0207710_10000132 Ga0207710_1000013221 185
304 3300025913 Ga0207695_10215720 Ga0207695_102157202 185
305 3300025935 Ga0207709_10000001 Ga0207709_100000011475 185
306 3300025935 Ga0207709_10000001 Ga0207709_100000011623 185
307 3300027312 Ga0209371_1000006 Ga0209371_100000626 185
308 3300027312 Ga0209371_1000008 Ga0209371_1000008903 185
309 3300028379 Ga0268266_10050261 Ga0268266_100502614 185
310 3300028379 Ga0268266_10132518 Ga0268266_101325182 185
311 3300030500 Ga0268256_1000007 Ga0268256_100000726 185
312 3300030500 Ga0268256_1000009 Ga0268256_1000009903 185
313 3300041411 Ga0439466_0000382 Ga0439466_0000382_7026_7586 185
314 3300041411 Ga0439466_0008838 Ga0439466_0008838_962_1522 185
315 3300046453 Ga0495627_000874 Ga0495627_000874_8002_8691 185
316 3300046453 Ga0495627_002304 Ga0495627_002304_7673_8335 185
317 3300046460 Ga0495638_0001860 Ga0495638_0001860_736_1314 185
318 3300046460 Ga0495638_0007207 Ga0495638_0007207_5976_6629 185
319 3300046501 Ga0495607_0000126 Ga0495607_0000126_2642_3286 185
320 3300046501 Ga0495607_0002107 Ga0495607_0002107_631_1287 185
321 3300046501 Ga0495607_0003703 Ga0495607_0003703_9512_10192 185
322 3300046501 Ga0495607_0004914 Ga0495607_0004914_1508_2065 185
323 3300046501 Ga0495607_0006706 Ga0495607_0006706_6098_6751 185
324 3300046501 Ga0495607_0012519 Ga0495607_0012519_3100_3657 185
325 3300046501 Ga0495607_0024110 Ga0495607_0024110_981_1541 185
326 3300046501 Ga0495607_0036947 Ga0495607_0036947_1453_2013 185
327 3300046507 Ga0495606_0080410 Ga0495606_0080410_431_991 185
328 3300046507 Ga0495606_0106658 Ga0495606_0106658_138_812 185
329 3300046519 Ga0495632_0001073 Ga0495632_0001073_11038_11598 185
330 3300046519 Ga0495632_0007433 Ga0495632_0007433_5427_6083 185
331 3300046519 Ga0495632_0007505 Ga0495632_0007505_1844_2497 185
332 3300046519 Ga0495632_0017655 Ga0495632_0017655_1607_2260 185
333 3300046519 Ga0495632_0021851 Ga0495632_0021851_1333_1893 185
334 3300046519 Ga0495632_0076449 Ga0495632_0076449_224_850 185
335 3300046519 Ga0495632_0094534 Ga0495632_0094534_279_944 185
336 3300046519 Ga0495632_0242350 Ga0495632_0242350_63_623 185
337 3300046522 Ga0495643_0002307 Ga0495643_0002307_13293_13928 185
338 3300046522 Ga0495643_0005210 Ga0495643_0005210_1400_2056 185
339 3300046522 Ga0495643_0005987 Ga0495643_0005987_5706_6359 185
340 3300046522 Ga0495643_0014560 Ga0495643_0014560_656_1312 185
341 3300046522 Ga0495643_0027110 Ga0495643_0027110_1052_1612 185
342 3300046525 Ga0495663_0001825 Ga0495663_0001825_5240_5896 185
343 3300046525 Ga0495663_0002961 Ga0495663_0002961_3127_3780 185
344 3300046525 Ga0495663_0015237 Ga0495663_0015237_415_975 185
345 3300046525 Ga0495663_0019739 Ga0495663_0019739_536_1114 185
346 3300046530 Ga0495654_0040396 Ga0495654_0040396_1330_1890 185
347 3300046530 Ga0495654_0119883 Ga0495654_0119883_383_1057 185
348 3300046558 Ga0495633_0006075 Ga0495633_0006075_5398_6057 185
349 3300046558 Ga0495633_0016377 Ga0495633_0016377_730_1302 185
350 3300046558 Ga0495633_0021924 Ga0495633_0021924_1090_1650 185
351 3300046665 Ga0495661_0049265 Ga0495661_0049265_447_1007 185
352 3300046694 Ga0495649_0003355 Ga0495649_0003355_10198_10854 185
353 3300046694 Ga0495649_0031241 Ga0495649_0031241_1503_2063 185
354 3300046694 Ga0495649_0049512 Ga0495649_0049512_708_1265 185
355 3300047470 Ga0495681_0006772 Ga0495681_0006772_6064_6738 185
356 3300047470 Ga0495681_0009490 Ga0495681_0009490_3950_4603 185
357 3300047470 Ga0495681_0021878 Ga0495681_0021878_1547_2107 185
358 3300047470 Ga0495681_0027559 Ga0495681_0027559_1876_2544 185
359 3300047470 Ga0495681_0090319 Ga0495681_0090319_166_726 185
360 3300048919 Ga0496116_0014202 Ga0496116_0014202_3175_3735 185
361 3300048919 Ga0496116_0085092 Ga0496116_0085092_501_1064 185
362 3300048922 Ga0496119_0095017 Ga0496119_0095017_228_788 185
363 3300048926 Ga0496123_0147522 Ga0496123_0147522_420_983 185
364 3300049460 Ga0495682_0000129 Ga0495682_0000129_5087_5746 185
365 3300049460 Ga0495682_0001380 Ga0495682_0001380_5839_6513 185
366 3300049460 Ga0495682_0002047 Ga0495682_0002047_1823_2476 185
367 3300049460 Ga0495682_0005614 Ga0495682_0005614_1562_2122 185
368 3300049460 Ga0495682_0013338 Ga0495682_0013338_1615_2175 185
369 3300050489 nmdc:mga03683_177016_c1 nmdc:mga03683_177016_c1_263_898 185
370 3300050489 nmdc:mga03683_51556_c1 nmdc:mga03683_51556_c1_868_1431 185
371 iso_pu_bacteria 2551306352 2552747469 185
372 iso_pu_bacteria 2773857761 2774388736 185

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

51

96

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
6zui-assembly1.cif.gz_A crystal structure of the cys-ser mutant of the cpyfp-based biosensor for hypochlorous acid 0.904 9 95
4kwa-assembly1.cif.gz_B crystal structure of a putative transcriptional regulator from saccharomonospora viridis in complex with choline 0.8696 10 181
4yze-assembly2.cif.gz_B crystal structure of e.coli nemr reduced form 0.8567 9 183
2g7s-assembly1.cif.gz_A-2 the crystal structure of transcriptional regulator, tetr family, from agrobacterium tumefaciens 0.8545 8 185
4yze-assembly1.cif.gz_C crystal structure of e.coli nemr reduced form 0.8427 9 183
ID Description Score Start End Superfamily
3br5D01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9695 12 55 1.10.10.60
3br3A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9682 10 55 1.10.10.60
2raeA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9666 8 49 1.10.10.60
2eh3A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9634 9 55 1.10.10.60
3mvpB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9628 9 49 1.10.10.60
ID Description Score Start End GO Terms
AF-D8JM38-F1-model_v4 deleted 0.9911 1 180
AF-A0A828SFW0-F1-model_v4 Transcriptional regulator, TetR family 0.9907 12 162 GO:0003677
AF-A0A4Q7BY56-F1-model_v4 deleted 0.9893 1 183
AF-A0A7H2RP34-F1-model_v4 deleted 0.989 1 184
AF-A0A6H0FZQ0-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9873 1 182 GO:0003677

Feature Viewer

pLDDT pTM Quality
93.6 0.88 High
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Predicted Structure (AlphaFold2)

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