F424631

General Info

Members Datasets Scaffolds Average Seq Length
368 235 736 329

Family's Representative Sequence

Representative Sequence 3300005617|Ga0068859_100298885|Ga0068859_1002988852
Length 357
Sequence VQQKVGWIFRTIYARHSGMFDHSSERRIVPPEPRLPGDLVSELLLGMRLFGVQYRRIAIAPPFGIGFGTVEGRAQFHFVARGPLYLRMAGGAQHVLGTGDAVLLPRGGVHDLLSAPDLPSRDICSFETETLCQSVGAIRACPDDADRAAGALIFSGCMEFDLGGMNPLVALMPEVMQVGTLLDRDPGILPMLEAMAREACTERAGFAAILARLADVVSASIVRGWVECGCGDATGWIDALRDPRLGRVIAAMHRDPGRDWTVAELAAEMGASRSVFAERFLAVTGLTPLRYVADLRMRLAAQWIGRDRMPIETAAHRLGYGSQAAFSRAFKRVVGRSPGAIRATADAGRGSGRTFEQ

Samples

Sample ID Description Type Environment
1 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
2 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
5 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
6 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
7 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
8 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
9 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
10 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
11 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
12 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
13 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
14 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
15 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
16 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
17 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
18 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
19 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
20 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
21 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
22 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
23 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
24 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
25 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
26 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
27 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
28 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
29 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
30 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
31 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
32 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
33 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
38 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
39 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
40 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
41 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
48 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
49 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
52 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
53 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
54 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
55 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
56 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
57 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
58 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
66 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
67 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
70 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
72 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
73 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
74 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
75 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
76 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
92 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
93 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
94 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
95 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
96 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
97 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
98 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
99 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
100 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
101 3300044650 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4E Metagenome Unclassified
102 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
103 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
104 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
105 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
106 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
107 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
108 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
109 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
110 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
111 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
112 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
113 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
114 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
115 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
116 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
117 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
118 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
119 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
120 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
121 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
122 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
123 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
124 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
125 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
126 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
127 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
128 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
129 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
130 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
131 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
132 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
133 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
134 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
135 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
136 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
137 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
138 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
139 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
140 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
141 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
142 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
143 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
144 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
145 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
146 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
147 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
148 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
149 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
150 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
151 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
152 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
153 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
154 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
155 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
156 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
157 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
158 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
159 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
160 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
161 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
162 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
163 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
168 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
169 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
170 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
171 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
172 3300053126 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 endosphere Metagenome Endosphere
173 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
174 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
175 2519103095 Burkholderia sp. KJ006 Isolate Nodule
176 2582581311 Burkholderia sp. WP42 Isolate Rhizosphere
177 2596583598 Ralstonia sp. UNCCL144 Isolate Unclassified
178 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
179 2599185178 Ralstonia sp. NFACC01 Isolate Rhizoplane
180 2599185239 Burkholderia sp. NFACC38-1 Isolate Rhizoplane
181 2599185240 Burkholderia sp. NFPP32 Isolate Rhizoplane
182 2599185355 Burkholderia sp. NFACC33-1 Isolate Rhizoplane
183 2643221568 Rhizobium sp. Root564 Isolate Unclassified
184 2675903129 Burkholderia pyrrocinia NFIX32 Isolate Rhizoplane
185 2718218334 Luteibacter rhizovicinus LJ96 Isolate Rhizosphere
186 2738541317 Rhizobium halophytocola DSM 21600 Isolate Unclassified
187 2757320392 Phyllobacterium leguminum ORS 1419 Isolate Nodule
188 2775507049 Rhizobium sp. ACO-34A Isolate Unclassified
189 2808606384 Burkholderia sp. SJZ089 Isolate Rhizosphere
190 2808606390 Burkholderia sp. SJZ115 Isolate Rhizosphere
191 2808606391 Burkholderia sp. SJZ091 Isolate Rhizosphere
192 2816332253 Burkholderia vietnamiensis HI2297 Isolate Unclassified
193 2816332256 Burkholderia vietnamiensis MSMB608WGS Isolate Unclassified
194 2816332286 Burkholderia vietnamiensis HI2221 Isolate Rhizosphere
195 2818991452 Burkholderia cepacia 561 Isolate Unclassified
196 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
197 2842918807 Luteibacter sp. R-73110 Isolate Unclassified
198 2844533157 Inquilinus sp. R-72501 v. 2 Isolate Unclassified
199 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
200 2863421361 Burkholderia cenocepacia CACua-24 Isolate Rhizosphere
201 2870068957 Burkholderia sp. JP2-270 Isolate Unclassified
202 2889790730 Chelativorans xinjiangense lm93 Isolate Rhizosphere
203 2889914905 Chelativorans alearense UJN715 Isolate Rhizosphere
204 2900577576 Ralstonia sp. TCR112 Isolate Rhizosphere
205 2904564687 Burkholderia sp. 571 Isolate Unclassified
206 2904571731 Burkholderia cenocepacia 574 Isolate Unclassified
207 2909042592 Labrys sp. LIt4 Isolate Nodule
208 2913308742 Rhizobium halophytocola DSM 21600 Isolate Unclassified
209 2919085039 Luteibacter sp. 1214 Isolate Unclassified
210 2919166419 Agrobacterium cavarae 2074 Isolate Unclassified
211 2919450847 Ancylobacter sp. 3268 Isolate Rhizosphere
212 2928058823 Ralstonia sp. 1138 Isolate Unclassified
213 2928157003 Burkholderia ambifaria 566 Isolate Unclassified
214 2928163908 Burkholderia sp. 567 Isolate Unclassified
215 2928170801 Burkholderia sp. 572 Isolate Unclassified
216 2928536128 Burkholderia sola 565 Isolate Unclassified
217 2929138655 Agrobacterium sp. R-72433 Hybrid assembly Isolate Unclassified
218 2953994433 Luteibacter sp. W1I16 Isolate Rhizosphere
219 2978969890 Agrobacterium sp. SORGH_AS 787 Isolate Unclassified
220 2981990288 Burkholderia sp. PvR073 Isolate Rhizosphere
221 2984587000 Agrobacterium larrymoorei SORGH_AS974 Isolate Aerial Root
222 2989771324 Rhizobium rhizolycopersici DBTS2 Isolate Rhizosphere
223 641736154 Burkholderia ambifaria IOP40-10 Isolate Rhizosphere
224 8001845381 Ancylobacter sonchi VKM B-3145 Isolate Unclassified
225 8018845410 Burkholderia reimsis BE51 Isolate Rhizosphere
226 8020807995 Burkholderia sp. B10 Isolate Rhizosphere
227 8020938398 Burkholderia sp. BE12 Isolate Rhizosphere
228 8020945358 Burkholderia sp. BE17 Isolate Rhizosphere
229 8020953355 Burkholderia sp. BE24 Isolate Rhizosphere
230 8021120328 Burkholderia sp. LS-044 Isolate Rhizosphere
231 8039098773 Burkholderia multivorans MSMB612WGS Isolate Unclassified
232 8040167225 Burkholderia vietnamiensis RS1 Isolate Unclassified
233 8040173305 Burkholderia vietnamiensis BE10 Isolate Rhizosphere
234 8054002106 Azospirillum lipoferum 59b Isolate Unclassified
235 8054558443 Rhizobium alarense TRM95111 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 83.42
Metatranscriptomes 0
Isolates 16.58

Biome Distribution

Category Percentage (%)
Aerial Root 0.27
Bulb 0
Endosphere 19.57
Nodule 1.09
Rhizoplane 3.53
Rhizosphere 55.16
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068859_100298885 3300005617 Bacteria 1703
2 JGI24741J21665_1004850 3300001915 Bacteria 2910
3 JGI24740J21852_10000740 3300001979 Bacteria 14230
4 JGI24739J22299_10024996 3300001989 Bacteria 2102
5 JGI24735J21928_10000518 3300002067 Bacteria 13664
6 JGI24738J21930_10000936 3300002075 Bacteria 8383
7 JGI25156J39149_1003685 3300002705 Bacteria 4920
8 JGI25154J39366_1001927 3300002738 Bacteria 6201
9 JGI25151J46595_10000318 3300003187 Bacteria 52064
10 rootH1_10087181 3300003316 Bacteria 4993
11 rootH1_10137067 3300003316 Bacteria 2383
12 rootH2_10113326 3300003320 Bacteria 1659
13 JGI25160J50197_1016071 3300003354 Bacteria 2426
14 Ga0055538_1000538 3300003751 Bacteria 13317
15 Ga0055538_1001490 3300003751 Bacteria 4419
16 Ga0055539_1000071 3300003752 Bacteria 131539
17 Ga0055533_1000723 3300003756 Bacteria 10735
18 Ga0055532_1000019 3300003758 Bacteria 286358
19 Ga0055532_1000363 3300003758 Bacteria 23828
20 Ga0055532_1001363 3300003758 Bacteria 6954
21 Ga0055532_1001476 3300003758 Bacteria 6522
22 Ga0055525_1000371 3300003759 Bacteria 29809
23 Ga0055527_1000595 3300003760 Bacteria 11672
24 Ga0055535_1000014 3300003761 Bacteria 286358
25 Ga0055535_1001491 3300003761 Bacteria 11672
26 Ga0055535_1001807 3300003761 Bacteria 9333
27 Ga0055542_1000565 3300003762 Bacteria 32556
28 Ga0055542_1001368 3300003762 Bacteria 12474
29 Ga0055542_1003911 3300003762 Bacteria 3823
30 Ga0055529_1000096 3300003763 Bacteria 133329
31 Ga0055529_1001251 3300003763 Bacteria 9411
32 Ga0055529_1004061 3300003763 Bacteria 2286
33 Ga0055526_1001829 3300003771 Bacteria 14713
34 Ga0055528_1003662 3300003790 Bacteria 7625
35 Ga0055541_1000573 3300003841 Bacteria 10008
36 Ga0055541_1003661 3300003841 Bacteria 2865
37 Ga0058692_1000790 3300003856 Bacteria 12695
38 Ga0058692_1011556 3300003856 Bacteria 2129
39 Ga0065165_1009652 3300005262 Bacteria 4290
40 Ga0065165_1022375 3300005262 Bacteria 2169
41 Ga0070658_10028309 3300005327 Bacteria 4497
42 Ga0070660_100000014 3300005339 Bacteria 109339
43 Ga0070661_100000268 3300005344 Bacteria 42166
44 Ga0070668_100071150 3300005347 Bacteria 2709
45 Ga0070659_100000033 3300005366 Bacteria 117255
46 Ga0070659_100000947 3300005366 Bacteria 21353
47 Ga0070667_100081943 3300005367 Bacteria 2761
48 Ga0070663_100000186 3300005455 Bacteria 31378
49 Ga0070663_100028170 3300005455 Bacteria 3822
50 Ga0068855_100002076 3300005563 Bacteria 24812
51 Ga0068855_100264844 3300005563 Bacteria 1913
52 Ga0070664_100000005 3300005564 Bacteria 222746
53 Ga0070664_100070871 3300005564 Bacteria 2986
54 Ga0068857_100021197 3300005577 Bacteria 5718
55 Ga0068854_100000076 3300005578 Bacteria 70578
56 Ga0068854_100000471 3300005578 Bacteria 24888
57 Ga0068856_100018740 3300005614 Bacteria 6709
58 Ga0068852_100012997 3300005616 Bacteria 6353
59 Ga0075364_10118043 3300006051 Bacteria 1774
60 Ga0075369_10006637 3300006186 Bacteria 4383
61 Ga0097620_100298889 3300006931 Bacteria 1703
62 Ga0105240_10000127 3300009093 Bacteria 156461
63 Ga0105240_10000169 3300009093 Bacteria 133189
64 Ga0105240_10001873 3300009093 Bacteria 34963
65 Ga0105240_10003443 3300009093 Bacteria 24559
66 Ga0105240_10005163 3300009093 Bacteria 19529
67 Ga0105240_10010721 3300009093 Bacteria 12861
68 Ga0105240_10012244 3300009093 Bacteria 11851
69 Ga0105240_10144369 3300009093 Bacteria 2841
70 Ga0105247_10002843 3300009101 Bacteria 11551
71 Ga0105237_10011531 3300009545 Bacteria 9349
72 Ga0105237_10307458 3300009545 Bacteria 1588
73 Ga0105239_10000056 3300010375 Bacteria 157615
74 Ga0105239_10075435 3300010375 Bacteria 3708
75 Ga0157373_10002257 3300013100 Bacteria 14604
76 Ga0157371_10000171 3300013102 Bacteria 94501
77 Ga0157371_10059630 3300013102 Bacteria 2705
78 Ga0157370_10000109 3300013104 Bacteria 95051
79 Ga0157370_10000204 3300013104 Bacteria 75030
80 Ga0157370_10130305 3300013104 Bacteria 2346
81 Ga0157369_10021404 3300013105 Bacteria 7233
82 Ga0157369_10092924 3300013105 Bacteria 3220
83 Ga0157372_10000089 3300013307 Bacteria 94457
84 Ga0157372_10099773 3300013307 Bacteria 3312
85 Ga0182008_10013220 3300014497 Bacteria 4340
86 Ga0182008_10013473 3300014497 Bacteria 4301
87 Ga0182006_1000074 3300015261 Bacteria 130403
88 Ga0182006_1001151 3300015261 Bacteria 16733
89 Ga0182006_1001566 3300015261 Bacteria 13665
90 Ga0182006_1011441 3300015261 Bacteria 3903
91 Ga0182006_1018736 3300015261 Bacteria 2920
92 Ga0182007_10006509 3300015262 Bacteria 5010
93 Ga0182007_10022083 3300015262 Bacteria 2251
94 Ga0182007_10025464 3300015262 Bacteria 2061
95 Ga0182005_1000004 3300015265 Bacteria 609645
96 Ga0182005_1003141 3300015265 Bacteria 5677
97 Ga0163161_10024130 3300017792 Bacteria 4294
98 Ga0213876_10050425 3300021384 Bacteria 2199
99 Ga0209784_100003 3300025224 Bacteria 1379451
100 Ga0209784_100436 3300025224 Bacteria 18019
101 Ga0209784_101083 3300025224 Bacteria 4577
102 Ga0209566_100002 3300025225 Bacteria 2614868
103 Ga0209566_100450 3300025225 Bacteria 30354
104 Ga0209566_100674 3300025225 Bacteria 20350
105 Ga0209674_100008 3300025226 Bacteria 1076909
106 Ga0209674_100383 3300025226 Bacteria 23339
107 Ga0209674_102649 3300025226 Bacteria 3712
108 Ga0209672_100012 3300025228 Bacteria 795742
109 Ga0209672_100030 3300025228 Bacteria 337051
110 Ga0209672_100154 3300025228 Bacteria 60377
111 Ga0209147_100002 3300025229 Bacteria 2158988
112 Ga0209147_100007 3300025229 Bacteria 795684
113 Ga0209147_100036 3300025229 Bacteria 337052
114 Ga0209147_100074 3300025229 Bacteria 208743
115 Ga0209563_100004 3300025230 Bacteria 1814108
116 Ga0209563_110097 3300025230 Bacteria 1396
117 Ga0209258_100002 3300025242 Bacteria 2158988
118 Ga0209258_100014 3300025242 Bacteria 720132
119 Ga0209258_100056 3300025242 Bacteria 337051
120 Ga0209258_101164 3300025242 Bacteria 10731
121 Ga0209646_1000194 3300025246 Bacteria 74630
122 Ga0209026_1001803 3300025250 Bacteria 8830
123 Ga0209677_100009 3300025253 Bacteria 749530
124 Ga0209677_102966 3300025253 Bacteria 5904
125 Ga0209148_1000178 3300025254 Bacteria 126383
126 Ga0209148_1000287 3300025254 Bacteria 75762
127 Ga0209148_1000350 3300025254 Bacteria 59964
128 Ga0209148_1008438 3300025254 Bacteria 2071
129 Ga0209759_1006430 3300025256 Bacteria 3946
130 Ga0209759_1009126 3300025256 Bacteria 3030
131 Ga0209455_1000061 3300025272 Bacteria 337052
132 Ga0209455_1000076 3300025272 Bacteria 284092
133 Ga0209455_1000340 3300025272 Bacteria 44422
134 Ga0209673_1000046 3300025273 Bacteria 289907
135 Ga0209130_1000880 3300025284 Bacteria 24560
136 Ga0209025_1000429 3300025294 Bacteria 83306
137 Ga0209564_1000540 3300025295 Bacteria 61148
138 Ga0207426_1000085 3300025302 Bacteria 293171
139 Ga0207647_10008661 3300025904 Bacteria 7268
140 Ga0207647_10045530 3300025904 Bacteria 2737
141 Ga0207705_10065823 3300025909 Bacteria 2620
142 Ga0207695_10000171 3300025913 Bacteria 191448
143 Ga0207695_10000243 3300025913 Bacteria 141682
144 Ga0207695_10000558 3300025913 Bacteria 76735
145 Ga0207695_10000663 3300025913 Bacteria 67900
146 Ga0207695_10002911 3300025913 Bacteria 24750
147 Ga0207695_10006319 3300025913 Bacteria 15413
148 Ga0207695_10009150 3300025913 Bacteria 12292
149 Ga0207695_10088826 3300025913 Bacteria 3109
150 Ga0207671_10006162 3300025914 Bacteria 10777
151 Ga0207671_10264369 3300025914 Bacteria 1354
152 Ga0207657_10000002 3300025919 Bacteria 444378
153 Ga0207649_10001212 3300025920 Bacteria 15530
154 Ga0207694_10099408 3300025924 Bacteria 2304
155 Ga0207690_10000011 3300025932 Bacteria 295252
156 Ga0207690_10000507 3300025932 Bacteria 25254
157 Ga0207679_10000020 3300025945 Bacteria 225727
158 Ga0207679_10345903 3300025945 Bacteria 1295
159 Ga0207667_10002126 3300025949 Bacteria 24826
160 Ga0207667_10006816 3300025949 Bacteria 13803
161 Ga0207640_10000017 3300025981 Bacteria 208145
162 Ga0207640_10000458 3300025981 Bacteria 24902
163 Ga0207678_10000008 3300026067 Bacteria 168926
164 Ga0207678_10000731 3300026067 Bacteria 30041
165 Ga0207678_10243093 3300026067 Bacteria 1541
166 Ga0207702_10000017 3300026078 Bacteria 222964
167 Ga0207674_10005359 3300026116 Bacteria 15256
168 Ga0207698_10017828 3300026142 Bacteria 4825
169 Ga0209371_1000213 3300027312 Bacteria 79996
170 Ga0209371_1000322 3300027312 Bacteria 52608
171 Ga0268256_1000170 3300030500 Bacteria 79996
172 Ga0307407_10029754 3300031903 Bacteria 2939
173 Ga0307412_10005160 3300031911 Bacteria 7316
174 Ga0395900_0006768 3300037418 Bacteria 11895
175 Ga0436365_0710840 3300039437 Bacteria 1845
176 Ga0439436_0000018 3300041404 Bacteria 71411
177 Ga0439447_012383 3300041407 Bacteria 2451
178 Ga0439431_0017587 3300041997 Bacteria 1683
179 Ga0450908_000061 3300042184 Bacteria 21679
180 Ga0466986_0075413 3300044650 Bacteria 2336
181 Ga0466972_0002103 3300044658 Bacteria 9772
182 Ga0466972_0015396 3300044658 Bacteria 3822
183 Ga0466961_0000059 3300044693 Bacteria 65381
184 Ga0466970_0013825 3300044765 Bacteria 4139
185 Ga0466970_0245117 3300044765 Bacteria 1003
186 Ga0466957_0028946 3300044842 Bacteria 3300
187 Ga0466960_0156293 3300044901 Bacteria 1221
188 Ga0466959_0000594 3300045049 Bacteria 21087
189 Ga0466958_0036127 3300045836 Bacteria 2956
190 Ga0466967_0105175 3300045976 Bacteria 2585
191 Ga0466967_0294379 3300045976 Bacteria 1560
192 Ga0495617_000076 3300046452 Bacteria 77876
193 Ga0495591_000850 3300046458 Bacteria 21477
194 Ga0495638_0000122 3300046460 Bacteria 125872
195 Ga0495650_0000008 3300046471 Bacteria 688246
196 Ga0495650_0000381 3300046471 Bacteria 76364
197 Ga0495605_0044529 3300046474 Bacteria 2193
198 Ga0495584_0021250 3300046491 Bacteria 3297
199 Ga0495585_0000046 3300046492 Bacteria 120969
200 Ga0495585_0019595 3300046492 Bacteria 3899
201 Ga0495607_0000003 3300046501 Bacteria 366900
202 Ga0495607_0000375 3300046501 Bacteria 46098
203 Ga0495607_0156719 3300046501 Bacteria 1160
204 Ga0495583_0019975 3300046506 Bacteria 3483
205 Ga0495606_0000203 3300046507 Bacteria 103887
206 Ga0495606_0000289 3300046507 Bacteria 87270
207 Ga0495606_0000692 3300046507 Bacteria 52383
208 Ga0495610_0006640 3300046512 Bacteria 7897
209 Ga0495610_0012797 3300046512 Bacteria 5019
210 Ga0495616_0000116 3300046513 Bacteria 70266
211 Ga0495616_0036843 3300046513 Bacteria 2521
212 Ga0495620_0000360 3300046515 Bacteria 31417
213 Ga0495620_0001547 3300046515 Bacteria 13668
214 Ga0495631_0000069 3300046518 Bacteria 64689
215 Ga0495631_0000308 3300046518 Bacteria 33846
216 Ga0495632_0007373 3300046519 Bacteria 6920
217 Ga0495637_0030473 3300046520 Bacteria 2393
218 Ga0495648_0000693 3300046524 Bacteria 35941
219 Ga0495648_0009541 3300046524 Bacteria 7494
220 Ga0495648_0021195 3300046524 Bacteria 4508
221 Ga0495654_0000091 3300046530 Bacteria 101543
222 Ga0495609_0012749 3300046538 Bacteria 3983
223 Ga0495668_0010037 3300046616 Bacteria 5764
224 Ga0495611_0000001 3300046648 Bacteria 2628469
225 Ga0495611_0000137 3300046648 Bacteria 51292
226 Ga0495625_0000001 3300046660 Bacteria 1641829
227 Ga0495625_0039937 3300046660 Bacteria 3425
228 Ga0495625_0054933 3300046660 Bacteria 2842
229 Ga0495661_0000737 3300046665 Bacteria 31909
230 Ga0495670_0000943 3300046691 Bacteria 14063
231 Ga0495671_0000566 3300046692 Bacteria 27664
232 Ga0495671_0021441 3300046692 Bacteria 3394
233 Ga0495649_0028783 3300046694 Bacteria 3079
234 Ga0495649_0160670 3300046694 Bacteria 1178
235 Ga0495589_0000138 3300046794 Bacteria 66651
236 Ga0495589_0020451 3300046794 Bacteria 3385
237 Ga0495660_0000109 3300046810 Bacteria 88780
238 Ga0495660_0000247 3300046810 Bacteria 52182
239 Ga0495660_0000248 3300046810 Bacteria 52123
240 Ga0495672_0000003 3300047320 Bacteria 728845
241 Ga0495683_0001642 3300047323 Bacteria 14349
242 Ga0495679_000209 3300047446 Bacteria 50591
243 Ga0495673_0000001 3300047469 Bacteria 1630730
244 Ga0495673_0000011 3300047469 Bacteria 674140
245 Ga0495673_0000018 3300047469 Bacteria 569190
246 Ga0495673_0000257 3300047469 Bacteria 73959
247 Ga0495686_0011219 3300047472 Bacteria 6318
248 Ga0496100_0304606 3300048903 Bacteria 1193
249 Ga0496101_0056016 3300048904 Bacteria 2850
250 Ga0496102_0145902 3300048905 Bacteria 2221
251 Ga0496105_0001317 3300048908 Bacteria 17377
252 Ga0496106_0085065 3300048909 Bacteria 2435
253 Ga0496107_0324625 3300048910 Bacteria 1145
254 Ga0496115_0000427 3300048918 Bacteria 34248
255 Ga0496115_0067062 3300048918 Bacteria 2901
256 Ga0496116_0000240 3300048919 Bacteria 100232
257 Ga0496116_0098131 3300048919 Bacteria 1759
258 Ga0496116_0131736 3300048919 Bacteria 1424
259 Ga0496117_0003587 3300048920 Bacteria 17905
260 Ga0496117_0004005 3300048920 Bacteria 16618
261 Ga0496117_0116484 3300048920 Bacteria 1651
262 Ga0496118_0002252 3300048921 Bacteria 26449
263 Ga0496118_0002895 3300048921 Bacteria 22333
264 Ga0496118_0047522 3300048921 Bacteria 3324
265 Ga0496118_0078574 3300048921 Bacteria 2334
266 Ga0496118_0138870 3300048921 Bacteria 1545
267 Ga0496119_0000362 3300048922 Bacteria 63745
268 Ga0496120_0000341 3300048923 Bacteria 77155
269 Ga0496120_0056664 3300048923 Bacteria 2210
270 Ga0496121_0000143 3300048924 Bacteria 159577
271 Ga0496121_0000169 3300048924 Bacteria 144577
272 Ga0496121_0000420 3300048924 Bacteria 83995
273 Ga0496121_0002489 3300048924 Bacteria 28039
274 Ga0496121_0022130 3300048924 Bacteria 6184
275 Ga0496121_0081135 3300048924 Bacteria 2568
276 Ga0496122_0089583 3300048925 Bacteria 2103
277 Ga0496122_0090703 3300048925 Bacteria 2084
278 Ga0496122_0107547 3300048925 Bacteria 1842
279 Ga0496122_0116465 3300048925 Bacteria 1738
280 Ga0496123_0068544 3300048926 Bacteria 2233
281 Ga0496123_0109564 3300048926 Bacteria 1582
282 Ga0496124_0007428 3300048927 Bacteria 11651
283 Ga0496125_0000589 3300048928 Bacteria 61966
284 Ga0496125_0009309 3300048928 Bacteria 10132
285 Ga0496126_0000322 3300048929 Bacteria 102330
286 Ga0496126_0004896 3300048929 Bacteria 15650
287 Ga0496126_0011698 3300048929 Bacteria 9048
288 Ga0496126_0136165 3300048929 Bacteria 2118
289 Ga0496126_0329714 3300048929 Bacteria 1253
290 Ga0495678_000198 3300049459 Bacteria 70659
291 Ga0495678_003949 3300049459 Bacteria 8874
292 Ga0495682_0000006 3300049460 Bacteria 316373
293 Ga0495682_0000451 3300049460 Bacteria 28527
294 Ga0501032_0197599 3300049569 Bacteria 1313
295 Ga0501033_0042907 3300049570 Bacteria 3371
296 Ga0501033_0063210 3300049570 Bacteria 2725
297 Ga0501033_0114317 3300049570 Bacteria 1962
298 Ga0501034_0072886 3300049571 Bacteria 3443
299 Ga0501047_0004298 3300049581 Bacteria 13410
300 Ga0501035_0023388 3300049822 Bacteria 5668
301 nmdc:mga00v17_173761_c1 3300050491 Bacteria 1390
302 Ga0500643_000002 3300053087 Bacteria 1277657
303 Ga0500555_000239 3300053103 Bacteria 24479
304 Ga0500572_001664 3300053111 Bacteria 5820
305 Ga0500621_000004 3300053126 Bacteria 485792
306 Ga0500636_0000101 3300053177 Bacteria 43900
307 Ga0500645_000942 3300053730 Bacteria 16564
308 2519461012 2519103095 Bacteria 6629912
309 2585289910 2582581311 Bacteria 6763856
310 2597028411 2596583598 Bacteria 5251611
311 2599103284 2597490356 Bacteria 7030811
312 2599444419 2599185178 Bacteria 5365746
313 2599735801 2599185239 Bacteria 8686614
314 2599743693 2599185240 Bacteria 7968121
315 2600209241 2599185355 Bacteria 7968906
316 2643857332 2643221568 Bacteria 5187270
317 2676742520 2675903129 Bacteria 7964495
318 2721026842 2718218334 Bacteria 4765486
319 2738948255 2738541317 Bacteria 5340176
320 2757571116 2757320392 Bacteria 3737298
321 2776912066 2775507049 Bacteria 6284736
322 2808973560 2808606384 Bacteria 8474373
323 2809008409 2808606390 Bacteria 8476311
324 2809015253 2808606391 Bacteria 8308166
325 2817259143 2816332253 Bacteria 6764532
326 2817280447 2816332256 Bacteria 6891714
327 2817452370 2816332286 Bacteria 6853759
328 2819630157 2818991452 Bacteria 8442785
329 2821449785 2821443989 Bacteria 7658172
330 2842919013 2842918807 Bacteria 4289178
331 2844535036 2844533157 Bacteria 7517899
332 2846953166 2846952575 Bacteria 6587527
333 2863423434 2863421361 Bacteria 7300805
334 2870074592 2870068957 Bacteria 8925310
335 2889791338 2889790730 Bacteria 5689708
336 2889920388 2889914905 Bacteria 5702301
337 2900579297 2900577576 Bacteria 5438534
338 2904569694 2904564687 Bacteria 7609577
339 2904577005 2904571731 Bacteria 7608790
340 2909044364 2909042592 Bacteria 6499737
341 2913313403 2913308742 Bacteria 5350706
342 2919085230 2919085039 Bacteria 4532964
343 2919166692 2919166419 Bacteria 4952238
344 2919455300 2919450847 Bacteria 5631160
345 2928063100 2928058823 Bacteria 5520022
346 2928157957 2928157003 Bacteria 7522202
347 2928165724 2928163908 Bacteria 7561269
348 2928173880 2928170801 Bacteria 8785406
349 2928536906 2928536128 Bacteria 7657547
350 2929141588 2929138655 Bacteria 5810547
351 2953994698 2953994433 Bacteria 4303959
352 2978973084 2978969890 Bacteria 5400756
353 2981990966 2981990288 Bacteria 7590678
354 2984591339 2984587000 Bacteria 5263363
355 2989774352 2989771324 Bacteria 5605128
356 642414310 641736154 Bacteria 7689995
357 8001848819 8001845381 Bacteria 5804942
358 8018852986 8018845410 Bacteria 8933938
359 8020808983 8020807995 Bacteria 6801506
360 8020940621 8020938398 Bacteria 7472757
361 8020953051 8020945358 Bacteria 8467355
362 8020954201 8020953355 Bacteria 7439080
363 8021121296 8021120328 Bacteria 8782274
364 8039101951 8039098773 Bacteria 6602928
365 8040167841 8040167225 Bacteria 6542727
366 8040173567 8040173305 Bacteria 6827067
367 8054007382 8054002106 Bacteria 7987183
368 8054561085 8054558443 Bacteria 5204801
369 Ga0068859_100298885
370 JGI24741J21665_1004850
371 JGI24740J21852_10000740
372 JGI24739J22299_10024996
373 JGI24735J21928_10000518
374 JGI24738J21930_10000936
375 JGI25156J39149_1003685
376 JGI25154J39366_1001927
377 JGI25151J46595_10000318
378 rootH1_10087181
379 rootH1_10137067
380 rootH2_10113326
381 JGI25160J50197_1016071
382 Ga0055538_1000538
383 Ga0055538_1001490
384 Ga0055539_1000071
385 Ga0055533_1000723
386 Ga0055532_1000019
387 Ga0055532_1000363
388 Ga0055532_1001363
389 Ga0055532_1001476
390 Ga0055525_1000371
391 Ga0055527_1000595
392 Ga0055535_1000014
393 Ga0055535_1001491
394 Ga0055535_1001807
395 Ga0055542_1000565
396 Ga0055542_1001368
397 Ga0055542_1003911
398 Ga0055529_1000096
399 Ga0055529_1001251
400 Ga0055529_1004061
401 Ga0055526_1001829
402 Ga0055528_1003662
403 Ga0055541_1000573
404 Ga0055541_1003661
405 Ga0058692_1000790
406 Ga0058692_1011556
407 Ga0065165_1009652
408 Ga0065165_1022375
409 Ga0070658_10028309
410 Ga0070660_100000014
411 Ga0070661_100000268
412 Ga0070668_100071150
413 Ga0070659_100000033
414 Ga0070659_100000947
415 Ga0070667_100081943
416 Ga0070663_100000186
417 Ga0070663_100028170
418 Ga0068855_100002076
419 Ga0068855_100264844
420 Ga0070664_100000005
421 Ga0070664_100070871
422 Ga0068857_100021197
423 Ga0068854_100000076
424 Ga0068854_100000471
425 Ga0068856_100018740
426 Ga0068852_100012997
427 Ga0075364_10118043
428 Ga0075369_10006637
429 Ga0097620_100298889
430 Ga0105240_10000127
431 Ga0105240_10000169
432 Ga0105240_10001873
433 Ga0105240_10003443
434 Ga0105240_10005163
435 Ga0105240_10010721
436 Ga0105240_10012244
437 Ga0105240_10144369
438 Ga0105247_10002843
439 Ga0105237_10011531
440 Ga0105237_10307458
441 Ga0105239_10000056
442 Ga0105239_10075435
443 Ga0157373_10002257
444 Ga0157371_10000171
445 Ga0157371_10059630
446 Ga0157370_10000109
447 Ga0157370_10000204
448 Ga0157370_10130305
449 Ga0157369_10021404
450 Ga0157369_10092924
451 Ga0157372_10000089
452 Ga0157372_10099773
453 Ga0182008_10013220
454 Ga0182008_10013473
455 Ga0182006_1000074
456 Ga0182006_1001151
457 Ga0182006_1001566
458 Ga0182006_1011441
459 Ga0182006_1018736
460 Ga0182007_10006509
461 Ga0182007_10022083
462 Ga0182007_10025464
463 Ga0182005_1000004
464 Ga0182005_1003141
465 Ga0163161_10024130
466 Ga0213876_10050425
467 Ga0209784_100003
468 Ga0209784_100436
469 Ga0209784_101083
470 Ga0209566_100002
471 Ga0209566_100450
472 Ga0209566_100674
473 Ga0209674_100008
474 Ga0209674_100383
475 Ga0209674_102649
476 Ga0209672_100012
477 Ga0209672_100030
478 Ga0209672_100154
479 Ga0209147_100002
480 Ga0209147_100007
481 Ga0209147_100036
482 Ga0209147_100074
483 Ga0209563_100004
484 Ga0209563_110097
485 Ga0209258_100002
486 Ga0209258_100014
487 Ga0209258_100056
488 Ga0209258_101164
489 Ga0209646_1000194
490 Ga0209026_1001803
491 Ga0209677_100009
492 Ga0209677_102966
493 Ga0209148_1000178
494 Ga0209148_1000287
495 Ga0209148_1000350
496 Ga0209148_1008438
497 Ga0209759_1006430
498 Ga0209759_1009126
499 Ga0209455_1000061
500 Ga0209455_1000076
501 Ga0209455_1000340
502 Ga0209673_1000046
503 Ga0209130_1000880
504 Ga0209025_1000429
505 Ga0209564_1000540
506 Ga0207426_1000085
507 Ga0207647_10008661
508 Ga0207647_10045530
509 Ga0207705_10065823
510 Ga0207695_10000171
511 Ga0207695_10000243
512 Ga0207695_10000558
513 Ga0207695_10000663
514 Ga0207695_10002911
515 Ga0207695_10006319
516 Ga0207695_10009150
517 Ga0207695_10088826
518 Ga0207671_10006162
519 Ga0207671_10264369
520 Ga0207657_10000002
521 Ga0207649_10001212
522 Ga0207694_10099408
523 Ga0207690_10000011
524 Ga0207690_10000507
525 Ga0207679_10000020
526 Ga0207679_10345903
527 Ga0207667_10002126
528 Ga0207667_10006816
529 Ga0207640_10000017
530 Ga0207640_10000458
531 Ga0207678_10000008
532 Ga0207678_10000731
533 Ga0207678_10243093
534 Ga0207702_10000017
535 Ga0207674_10005359
536 Ga0207698_10017828
537 Ga0209371_1000213
538 Ga0209371_1000322
539 Ga0268256_1000170
540 Ga0307407_10029754
541 Ga0307412_10005160
542 Ga0395900_0006768
543 Ga0436365_0710840
544 Ga0439436_0000018
545 Ga0439447_012383
546 Ga0439431_0017587
547 Ga0450908_000061
548 Ga0466986_0075413
549 Ga0466972_0002103
550 Ga0466972_0015396
551 Ga0466961_0000059
552 Ga0466970_0013825
553 Ga0466970_0245117
554 Ga0466957_0028946
555 Ga0466960_0156293
556 Ga0466959_0000594
557 Ga0466958_0036127
558 Ga0466967_0105175
559 Ga0466967_0294379
560 Ga0495617_000076
561 Ga0495591_000850
562 Ga0495638_0000122
563 Ga0495650_0000008
564 Ga0495650_0000381
565 Ga0495605_0044529
566 Ga0495584_0021250
567 Ga0495585_0000046
568 Ga0495585_0019595
569 Ga0495607_0000003
570 Ga0495607_0000375
571 Ga0495607_0156719
572 Ga0495583_0019975
573 Ga0495606_0000203
574 Ga0495606_0000289
575 Ga0495606_0000692
576 Ga0495610_0006640
577 Ga0495610_0012797
578 Ga0495616_0000116
579 Ga0495616_0036843
580 Ga0495620_0000360
581 Ga0495620_0001547
582 Ga0495631_0000069
583 Ga0495631_0000308
584 Ga0495632_0007373
585 Ga0495637_0030473
586 Ga0495648_0000693
587 Ga0495648_0009541
588 Ga0495648_0021195
589 Ga0495654_0000091
590 Ga0495609_0012749
591 Ga0495668_0010037
592 Ga0495611_0000001
593 Ga0495611_0000137
594 Ga0495625_0000001
595 Ga0495625_0039937
596 Ga0495625_0054933
597 Ga0495661_0000737
598 Ga0495670_0000943
599 Ga0495671_0000566
600 Ga0495671_0021441
601 Ga0495649_0028783
602 Ga0495649_0160670
603 Ga0495589_0000138
604 Ga0495589_0020451
605 Ga0495660_0000109
606 Ga0495660_0000247
607 Ga0495660_0000248
608 Ga0495672_0000003
609 Ga0495683_0001642
610 Ga0495679_000209
611 Ga0495673_0000001
612 Ga0495673_0000011
613 Ga0495673_0000018
614 Ga0495673_0000257
615 Ga0495686_0011219
616 Ga0496100_0304606
617 Ga0496101_0056016
618 Ga0496102_0145902
619 Ga0496105_0001317
620 Ga0496106_0085065
621 Ga0496107_0324625
622 Ga0496115_0000427
623 Ga0496115_0067062
624 Ga0496116_0000240
625 Ga0496116_0098131
626 Ga0496116_0131736
627 Ga0496117_0003587
628 Ga0496117_0004005
629 Ga0496117_0116484
630 Ga0496118_0002252
631 Ga0496118_0002895
632 Ga0496118_0047522
633 Ga0496118_0078574
634 Ga0496118_0138870
635 Ga0496119_0000362
636 Ga0496120_0000341
637 Ga0496120_0056664
638 Ga0496121_0000143
639 Ga0496121_0000169
640 Ga0496121_0000420
641 Ga0496121_0002489
642 Ga0496121_0022130
643 Ga0496121_0081135
644 Ga0496122_0089583
645 Ga0496122_0090703
646 Ga0496122_0107547
647 Ga0496122_0116465
648 Ga0496123_0068544
649 Ga0496123_0109564
650 Ga0496124_0007428
651 Ga0496125_0000589
652 Ga0496125_0009309
653 Ga0496126_0000322
654 Ga0496126_0004896
655 Ga0496126_0011698
656 Ga0496126_0136165
657 Ga0496126_0329714
658 Ga0495678_000198
659 Ga0495678_003949
660 Ga0495682_0000006
661 Ga0495682_0000451
662 Ga0501032_0197599
663 Ga0501033_0042907
664 Ga0501033_0063210
665 Ga0501033_0114317
666 Ga0501034_0072886
667 Ga0501047_0004298
668 Ga0501035_0023388
669 nmdc:mga00v17_173761_c1
670 Ga0500643_000002
671 Ga0500555_000239
672 Ga0500572_001664
673 Ga0500621_000004
674 Ga0500636_0000101
675 Ga0500645_000942
676 2519461012
677 2585289910
678 2597028411
679 2599103284
680 2599444419
681 2599735801
682 2599743693
683 2600209241
684 2643857332
685 2676742520
686 2721026842
687 2738948255
688 2757571116
689 2776912066
690 2808973560
691 2809008409
692 2809015253
693 2817259143
694 2817280447
695 2817452370
696 2819630157
697 2821449785
698 2842919013
699 2844535036
700 2846953166
701 2863423434
702 2870074592
703 2889791338
704 2889920388
705 2900579297
706 2904569694
707 2904577005
708 2909044364
709 2913313403
710 2919085230
711 2919166692
712 2919455300
713 2928063100
714 2928157957
715 2928165724
716 2928173880
717 2928536906
718 2929141588
719 2953994698
720 2978973084
721 2981990966
722 2984591339
723 2989774352
724 642414310
725 8001848819
726 8018852986
727 8020808983
728 8020940621
729 8020953051
730 8020954201
731 8021121296
732 8039101951
733 8040167841
734 8040173567
735 8054007382
736 8054561085

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12833

HTH_18

Helix-turn-helix domain

265

344

0.98

PF00165

HTH_AraC

Bacterial regulatory helix-turn-helix proteins, AraC family

306

343

0.94

PF12852

Cupin_6

Cupin

38

227

0.86

PF02311

AraC_binding

AraC-like ligand binding domain

50

125

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
3oio-assembly1.cif.gz_A crystal structure of transcriptional regulator (arac-type dna-binding domain-containing proteins) from chromobacterium violaceum 0.9008 231 336
3w6v-assembly1.cif.gz_A crystal structure of the dna-binding domain of adpa, the global transcriptional factor, in complex with a target dna 0.8931 235 333
6swi-assembly1.cif.gz_A the c-terminal domain of arat, a response regulator from geobacillus stearothermophilus 0.8879 232 333
7w5x-assembly1.cif.gz_K cryo-em structure of soxs-dependent transcription activation complex with zwf promoter dna 0.8772 231 332
3mn2-assembly2.cif.gz_B the crystal structure of a probable arac family transcriptional regulator from rhodopseudomonas palustris cga009 0.8712 233 334
ID Description Score Start End Superfamily
af_P31449_179_288_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9358 233 335 1.10.10.60
1xs9A02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9258 288 332 1.10.10.60
1d5yD02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.918 285 332 1.10.10.60
af_P77379_178_282_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9179 235 336 1.10.10.60
af_P09377_170_274_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9044 233 333 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A0Q6X117-F1-model_v4 HTH araC/xylS-type domain-containing protein 0.9344 232 331 GO:0003700
GO:0043565
AF-A0A061PBG8-F1-model_v4 Transcriptional regulator, AraC family 0.9281 237 336 GO:0003700
GO:0043565
AF-A0A239B962-F1-model_v4 Transcriptional regulator, AraC family 0.9277 233 336 GO:0003700
GO:0043565
AF-A0A2R8BN70-F1-model_v4 Transposon Tn10 TetD protein 0.9241 233 336 GO:0003700
GO:0043565
AF-A0A536L2X9-F1-model_v4 Helix-turn-helix transcriptional regulator 0.9226 233 339 GO:0003700
GO:0043565

Map