F424442

General Info

Members Datasets Scaffolds Average Seq Length
367 215 326 321

Family's Representative Sequence

Representative Sequence 3300046453|Ga0495627_001467|Ga0495627_001467_2842_3807
Length 321
Sequence MQRLFLQEVATRDGFQNEARFIETADKIAMIDALSQCGFAKIEVTSFTSPKAITALRDAEAVMHGIRRNPAVEYTVLVPNVRGAERALACNIDEANLVMSVSEPHNRSNLRMSREQSFAQLREVFSVIGAKGPVAINVSLSTVFGCPMQGDVPVGEVLHWVERFAELGARGVTLCDTTGMAYPSQVEALSRAVRERFPALQLTLHFHNTRGMALANALAAIDAGVDRFDSSLGGLGGCPYAPGASGNVCTEDLLHMLQLMGFSTGVDLDRVLAVARQLPGLIGHEIPSQVLKAGKRLDLHPIPAHVASLEKQVANTLELRP

Samples

Sample ID Description Type Environment
1 2124908027 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v1 Metagenome Rhizosphere
2 2501025501 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
3 2501025502 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
4 2501025504 Paraburkholderia silvatlantica SRMrh-20 Isolate Unclassified
5 2510917013 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
6 2510917014 Paraburkholderia silvatlantica SRMrh-20 Isolate Unclassified
7 2510917015 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
8 2511231015 Pseudomonas sp. GM49 Isolate Nodule
9 2511231017 Pseudomonas sp. GM55 Isolate Nodule
10 2515154189 Paraburkholderia nodosa DSM 21604 Isolate Unclassified
11 2547132374 Acidovorax radicis N35 Isolate Unclassified
12 2599185240 Burkholderia sp. NFPP32 Isolate Rhizoplane
13 2599185355 Burkholderia sp. NFACC33-1 Isolate Rhizoplane
14 2600255283 Pseudomonas sp. NFR16 Isolate Rhizoplane
15 2643221570 Acidovorax sp. Root568 Isolate Unclassified
16 2643221596 Acidovorax sp. Root70 Isolate Unclassified
17 2643221611 Acidovorax sp. Root219 Isolate Unclassified
18 2643221652 Acidovorax sp. Root402 Isolate Unclassified
19 2675903129 Burkholderia pyrrocinia NFIX32 Isolate Rhizoplane
20 2721755523 Delftia sp. HK171 Isolate Unclassified
21 2738543012 Acidovorax sp. CF301 Isolate Unclassified
22 2738543015 Pseudomonas sp. GV041 Isolate Unclassified
23 2808606395 Achromobacter sp. SLBN-14 Isolate Unclassified
24 2831265667 Variovorax guangxiensis DSM 27352 Isolate Rhizosphere
25 2839138175 Delftia acidovorans B15 Isolate Rhizosphere
26 2842718218 Acidovorax sp. R-73343 Isolate Unclassified
27 2856287931 Paraburkholderia bannensis BE22 Isolate Rhizosphere
28 2857357740 Paraburkholderia tropica BE15 Isolate Rhizosphere
29 2863421361 Burkholderia cenocepacia CACua-24 Isolate Rhizosphere
30 2870068957 Burkholderia sp. JP2-270 Isolate Unclassified
31 2883087390 Paraburkholderia guartelaensis CNPSo 3008 Isolate Unclassified
32 2885198086 Variovorax sp. 679 Isolate Unclassified
33 2885211737 Variovorax sp. 553 Isolate Unclassified
34 2928157003 Burkholderia ambifaria 566 Isolate Unclassified
35 2928163908 Burkholderia sp. 567 Isolate Unclassified
36 2931396565 Pseudomonas sp. DR48 Isolate Rhizosphere
37 2981990288 Burkholderia sp. PvR073 Isolate Rhizosphere
38 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
39 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
40 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
41 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
42 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
43 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
44 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
45 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
46 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
47 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
48 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
49 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
50 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
51 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
52 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
53 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
54 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
55 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
56 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
57 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
58 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
59 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
60 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
61 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
62 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
63 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
64 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
65 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
66 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
67 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
68 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
69 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
70 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
71 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
72 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
73 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
74 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
75 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
76 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
77 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
78 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
79 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
80 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
85 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
86 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
88 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
107 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
109 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
110 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
111 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
112 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
113 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
114 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
115 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
116 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
117 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
118 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
119 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
120 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
121 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
122 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
123 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
124 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
125 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
126 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
127 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
128 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
129 3300044668 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3E2 Metagenome Unclassified
130 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
131 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
132 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
133 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
134 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
135 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
136 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
137 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
138 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
139 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
140 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
141 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
142 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
143 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
144 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
145 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
146 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
147 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
148 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
149 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
150 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
151 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
152 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
153 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
154 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
155 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
156 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
157 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
158 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
159 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
160 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
161 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
162 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
163 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
164 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
165 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
166 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
167 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
168 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
169 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
170 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
171 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
172 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
173 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
174 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
175 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
176 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
177 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
178 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
179 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
180 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
181 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
182 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
183 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
184 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
185 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
186 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
187 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
188 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
189 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
190 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
191 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
192 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
193 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
194 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
195 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
196 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
197 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
198 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
199 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
200 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
201 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
202 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
203 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
204 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
205 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
206 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
207 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
208 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
209 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
210 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
211 641736154 Burkholderia ambifaria IOP40-10 Isolate Rhizosphere
212 8020938398 Burkholderia sp. BE12 Isolate Rhizosphere
213 8020953355 Burkholderia sp. BE24 Isolate Rhizosphere
214 8039098773 Burkholderia multivorans MSMB612WGS Isolate Unclassified
215 8055225921 Achromobacter panacis KCTC 42751 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.56
Metatranscriptomes 0.27
Isolates 11.17

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.63
Nodule 1.09
Rhizoplane 3.81
Rhizosphere 72.48
Stem 0
Stem Tuber 0
Unclassified 17.98

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 MRS2a_Contig_127 2124908027 Bacteria 16503
2 MRS2a_Contig_9668 2124908027 Bacteria 1729
3 JGI24735J21928_10002372 3300002067 Bacteria 6558
4 Ga0055532_1000190 3300003758 Bacteria 51412
5 Ga0055532_1000529 3300003758 Bacteria 16669
6 Ga0055527_1000291 3300003760 Bacteria 29060
7 Ga0055535_1000506 3300003761 Bacteria 34557
8 Ga0055542_1000502 3300003762 Bacteria 35790
9 Ga0055529_1000495 3300003763 Bacteria 35799
10 Ga0065714_10000930 3300005288 Bacteria 2189
11 Ga0065704_10136320 3300005289 Bacteria 1567
12 Ga0065712_10012187 3300005290 Bacteria 3170
13 Ga0065715_10130471 3300005293 Bacteria 2026
14 Ga0070658_10057021 3300005327 Bacteria 3177
15 Ga0070660_100001233 3300005339 Bacteria 17366
16 Ga0070669_100033880 3300005353 Bacteria 3696
17 Ga0070675_100035854 3300005354 Bacteria 4034
18 Ga0070659_100000055 3300005366 Bacteria 88573
19 Ga0068853_100098234 3300005539 Bacteria 2585
20 Ga0070672_100408051 3300005543 Bacteria 1165
21 Ga0068855_100146546 3300005563 Bacteria 2687
22 Ga0068852_100013927 3300005616 Bacteria 6168
23 Ga0081539_10016192 3300005985 Bacteria 5348
24 Ga0075432_10007080 3300006058 Bacteria 3820
25 Ga0075362_10005546 3300006177 Bacteria 4629
26 Ga0079104_1000004 3300006946 Bacteria 444549
27 Ga0105251_10000066 3300009011 Bacteria 99856
28 Ga0105251_10012171 3300009011 Bacteria 4881
29 Ga0105244_10045536 3300009036 Bacteria 2256
30 Ga0105250_10000033 3300009092 Bacteria 157956
31 Ga0105250_10068026 3300009092 Bacteria 1437
32 Ga0105250_10078413 3300009092 Bacteria 1338
33 Ga0105240_10000229 3300009093 Bacteria 111182
34 Ga0105240_10005075 3300009093 Bacteria 19737
35 Ga0105240_10023042 3300009093 Bacteria 8247
36 Ga0114129_10030738 3300009147 Bacteria 7595
37 Ga0105243_10000547 3300009148 Bacteria 37977
38 Ga0105243_10178982 3300009148 Bacteria 1842
39 Ga0105248_10322547 3300009177 Bacteria 1740
40 Ga0105248_10562741 3300009177 Bacteria 1286
41 Ga0105237_10097776 3300009545 Bacteria 2926
42 Ga0105239_10000839 3300010375 Bacteria 43658
43 Ga0105239_10007284 3300010375 Bacteria 12699
44 Ga0105246_10110028 3300011119 Bacteria 2022
45 Ga0157371_10189382 3300013102 Bacteria 1473
46 Ga0157370_10070692 3300013104 Bacteria 3294
47 Ga0157369_10000268 3300013105 Bacteria 70336
48 Ga0157375_10147339 3300013308 Bacteria 2486
49 Ga0182008_10000089 3300014497 Bacteria 69969
50 Ga0182008_10007326 3300014497 Bacteria 6101
51 Ga0182008_10123095 3300014497 Bacteria 1289
52 Ga0182006_1007583 3300015261 Bacteria 4959
53 Ga0182006_1077464 3300015261 Bacteria 1219
54 Ga0182005_1003309 3300015265 Bacteria 5505
55 Ga0163161_10044607 3300017792 Bacteria 3194
56 Ga0206354_10424944 3300020081 Bacteria 1772
57 Ga0209672_100080 3300025228 Bacteria 143481
58 Ga0209147_100071 3300025229 Bacteria 215861
59 Ga0209147_100091 3300025229 Bacteria 168353
60 Ga0209258_100082 3300025242 Bacteria 247739
61 Ga0209148_1000195 3300025254 Bacteria 109654
62 Ga0209759_1004919 3300025256 Bacteria 4836
63 Ga0209565_1006597 3300025263 Bacteria 3234
64 Ga0209455_1000172 3300025272 Bacteria 109654
65 Ga0209673_1000076 3300025273 Bacteria 230907
66 Ga0207696_1032074 3300025711 Bacteria 1584
67 Ga0207696_1042651 3300025711 Bacteria 1321
68 Ga0207655_1006992 3300025728 Bacteria 7392
69 Ga0207713_1000724 3300025735 Bacteria 30902
70 Ga0207713_1021020 3300025735 Bacteria 3139
71 Ga0207647_10001075 3300025904 Bacteria 21061
72 Ga0207695_10000268 3300025913 Bacteria 130752
73 Ga0207695_10020055 3300025913 Bacteria 7672
74 Ga0207695_10048688 3300025913 Bacteria 4474
75 Ga0207671_10028223 3300025914 Bacteria 4195
76 Ga0207657_10000087 3300025919 Bacteria 88335
77 Ga0207649_10149277 3300025920 Bacteria 1608
78 Ga0207694_10075553 3300025924 Bacteria 2637
79 Ga0207690_10000071 3300025932 Bacteria 88665
80 Ga0207709_10000019 3300025935 Bacteria 402225
81 Ga0207709_10289318 3300025935 Bacteria 1214
82 Ga0207691_10065039 3300025940 Bacteria 3302
83 Ga0207711_10216637 3300025941 Bacteria 1750
84 Ga0207667_10058539 3300025949 Bacteria 4040
85 Ga0207639_10074372 3300026041 Bacteria 2668
86 Ga0207678_10104432 3300026067 Bacteria 2418
87 Ga0207708_10332403 3300026075 Bacteria 1242
88 Ga0207698_10009359 3300026142 Bacteria 6244
89 Ga0209281_1000005 3300027111 Bacteria 1242284
90 Ga0209371_1000713 3300027312 Bacteria 28089
91 Ga0207428_10001135 3300027907 Bacteria 28911
92 Ga0265338_10000708 3300028800 Bacteria 56942
93 Ga0268256_1000608 3300030500 Bacteria 28089
94 Ga0307405_10030210 3300031731 Bacteria 3175
95 Ga0307406_10002603 3300031901 Bacteria 9832
96 Ga0307412_10013271 3300031911 Bacteria 4824
97 Ga0395899_0016095 3300037312 Bacteria 5701
98 Ga0395900_0000015 3300037418 Bacteria 384313
99 Ga0395900_0028321 3300037418 Bacteria 5737
100 Ga0395898_0000346 3300037466 Bacteria 104661
101 Ga0395898_0011051 3300037466 Bacteria 9405
102 Ga0395898_0037403 3300037466 Bacteria 4814
103 Ga0395901_0000121 3300038443 Bacteria 100690
104 Ga0395901_0000769 3300038443 Bacteria 35972
105 Ga0395901_0097729 3300038443 Bacteria 3078
106 Ga0439438_006409 3300041405 Bacteria 4156
107 Ga0439447_009243 3300041407 Bacteria 3002
108 Ga0439466_0007941 3300041411 Bacteria 4002
109 Ga0439451_008704 3300042009 Bacteria 2056
110 Ga0439452_004263 3300042010 Bacteria 4833
111 Ga0439463_000427 3300042016 Bacteria 11745
112 Ga0450911_003909 3300042115 Bacteria 2527
113 Ga0450898_003121 3300042134 Bacteria 2360
114 Ga0451577_0174735 3300042876 Bacteria 1936
115 Ga0466969_0006727 3300044656 Bacteria 6112
116 Ga0466972_0014184 3300044658 Bacteria 3994
117 Ga0466980_0064119 3300044668 Bacteria 2566
118 Ga0453683_0086945 3300044673 Bacteria 1959
119 Ga0495617_002668 3300046452 Bacteria 6942
120 Ga0495617_023305 3300046452 Bacteria 2091
121 Ga0495627_001467 3300046453 Bacteria 13747
122 Ga0495590_0006547 3300046457 Bacteria 4541
123 Ga0495590_0016766 3300046457 Bacteria 2643
124 Ga0495590_0037151 3300046457 Bacteria 1699
125 Ga0495591_000224 3300046458 Bacteria 56456
126 Ga0495591_001621 3300046458 Bacteria 13604
127 Ga0495638_0055622 3300046460 Bacteria 2457
128 Ga0495580_0004305 3300046472 Bacteria 11969
129 Ga0495580_0014143 3300046472 Bacteria 6065
130 Ga0495605_0000470 3300046474 Bacteria 35866
131 Ga0495605_0002522 3300046474 Bacteria 11299
132 Ga0495605_0003778 3300046474 Bacteria 8983
133 Ga0495605_0047564 3300046474 Bacteria 2103
134 Ga0495605_0095402 3300046474 Bacteria 1373
135 Ga0495584_0000686 3300046491 Bacteria 22477
136 Ga0495584_0001410 3300046491 Bacteria 14471
137 Ga0495584_0072186 3300046491 Bacteria 1734
138 Ga0495585_0000282 3300046492 Bacteria 50936
139 Ga0495585_0004671 3300046492 Bacteria 8828
140 Ga0495596_0000835 3300046500 Bacteria 18636
141 Ga0495607_0000047 3300046501 Bacteria 121696
142 Ga0495607_0002943 3300046501 Bacteria 13398
143 Ga0495607_0005502 3300046501 Bacteria 9045
144 Ga0495607_0007690 3300046501 Bacteria 7428
145 Ga0495607_0008631 3300046501 Bacteria 6949
146 Ga0495607_0009093 3300046501 Bacteria 6753
147 Ga0495583_0000008 3300046506 Bacteria 411092
148 Ga0495583_0000045 3300046506 Bacteria 220503
149 Ga0495583_0000206 3300046506 Bacteria 99380
150 Ga0495583_0000281 3300046506 Bacteria 82123
151 Ga0495583_0004924 3300046506 Bacteria 9285
152 Ga0495583_0006736 3300046506 Bacteria 7433
153 Ga0495606_0000360 3300046507 Bacteria 77832
154 Ga0495606_0001429 3300046507 Bacteria 32047
155 Ga0495606_0011489 3300046507 Bacteria 7218
156 Ga0495610_0011451 3300046512 Bacteria 5421
157 Ga0495610_0015787 3300046512 Bacteria 4374
158 Ga0495616_0000456 3300046513 Bacteria 31180
159 Ga0495616_0002483 3300046513 Bacteria 12208
160 Ga0495616_0008459 3300046513 Bacteria 6096
161 Ga0495620_0012381 3300046515 Bacteria 4410
162 Ga0495631_0016887 3300046518 Bacteria 3465
163 Ga0495632_0000037 3300046519 Bacteria 158699
164 Ga0495632_0001836 3300046519 Bacteria 17116
165 Ga0495632_0002620 3300046519 Bacteria 13548
166 Ga0495637_0001050 3300046520 Bacteria 17305
167 Ga0495643_0003881 3300046522 Bacteria 10742
168 Ga0495643_0005109 3300046522 Bacteria 8974
169 Ga0495643_0086591 3300046522 Bacteria 1622
170 Ga0495643_0159248 3300046522 Bacteria 1112
171 Ga0495644_0000054 3300046523 Bacteria 55331
172 Ga0495644_0096463 3300046523 Bacteria 1117
173 Ga0495648_0001650 3300046524 Bacteria 21659
174 Ga0495666_0061527 3300046526 Bacteria 1793
175 Ga0495642_0001123 3300046528 Bacteria 12315
176 Ga0495642_0017500 3300046528 Bacteria 2800
177 Ga0495652_0105579 3300046529 Bacteria 2276
178 Ga0495654_0000112 3300046530 Bacteria 92528
179 Ga0495654_0078951 3300046530 Bacteria 1547
180 Ga0495665_0096088 3300046531 Bacteria 1556
181 Ga0495665_0181928 3300046531 Bacteria 1092
182 Ga0495609_0000107 3300046538 Bacteria 97734
183 Ga0495609_0000157 3300046538 Bacteria 70102
184 Ga0495609_0000552 3300046538 Bacteria 29569
185 Ga0495609_0000681 3300046538 Bacteria 26243
186 Ga0495609_0005556 3300046538 Bacteria 6583
187 Ga0495621_0001548 3300046539 Bacteria 5990
188 Ga0495621_0040575 3300046539 Bacteria 1632
189 Ga0495597_0004447 3300046542 Bacteria 7701
190 Ga0495622_0060735 3300046557 Bacteria 1750
191 Ga0495656_0000900 3300046615 Bacteria 9618
192 Ga0495656_0001551 3300046615 Bacteria 7510
193 Ga0495668_0036502 3300046616 Bacteria 2753
194 Ga0495611_0002446 3300046648 Bacteria 8484
195 Ga0495611_0002453 3300046648 Bacteria 8465
196 Ga0495611_0088397 3300046648 Bacteria 1430
197 Ga0495625_0001919 3300046660 Bacteria 23507
198 Ga0495625_0002739 3300046660 Bacteria 18665
199 Ga0495625_0015881 3300046660 Bacteria 5942
200 Ga0495625_0044650 3300046660 Bacteria 3207
201 Ga0495659_0000002 3300046664 Bacteria 176698
202 Ga0495659_0000864 3300046664 Bacteria 10784
203 Ga0495659_0005499 3300046664 Bacteria 3986
204 Ga0495659_0009135 3300046664 Bacteria 3161
205 Ga0495661_0000006 3300046665 Bacteria 427288
206 Ga0495661_0000057 3300046665 Bacteria 135044
207 Ga0495661_0000154 3300046665 Bacteria 80795
208 Ga0495661_0005142 3300046665 Bacteria 9326
209 Ga0495661_0016364 3300046665 Bacteria 4918
210 Ga0495669_0060622 3300046684 Bacteria 1711
211 Ga0495670_0001337 3300046691 Bacteria 12033
212 Ga0495670_0023614 3300046691 Bacteria 3035
213 Ga0495670_0025097 3300046691 Bacteria 2948
214 Ga0495671_0001474 3300046692 Bacteria 15778
215 Ga0495649_0000106 3300046694 Bacteria 74615
216 Ga0495649_0000811 3300046694 Bacteria 25193
217 Ga0495649_0006189 3300046694 Bacteria 7472
218 Ga0495649_0186273 3300046694 Bacteria 1081
219 Ga0495589_0013424 3300046794 Bacteria 4227
220 Ga0495589_0058795 3300046794 Bacteria 1890
221 Ga0495660_0000868 3300046810 Bacteria 22348
222 Ga0495660_0020126 3300046810 Bacteria 3825
223 Ga0495660_0069611 3300046810 Bacteria 1870
224 Ga0495636_0000215 3300047318 Bacteria 22666
225 Ga0495636_0000825 3300047318 Bacteria 11427
226 Ga0495636_0061462 3300047318 Bacteria 1588
227 Ga0495674_0003028 3300047319 Bacteria 16365
228 Ga0495674_0041074 3300047319 Bacteria 4134
229 Ga0495674_0204692 3300047319 Bacteria 1636
230 Ga0495672_0000987 3300047320 Bacteria 29395
231 Ga0495672_0001300 3300047320 Bacteria 24899
232 Ga0495672_0008626 3300047320 Bacteria 7499
233 Ga0495672_0067308 3300047320 Bacteria 2040
234 Ga0495683_0001830 3300047323 Bacteria 13370
235 Ga0495683_0002983 3300047323 Bacteria 9991
236 Ga0495683_0006620 3300047323 Bacteria 6317
237 Ga0495683_0014523 3300047323 Bacteria 4103
238 Ga0495683_0034990 3300047323 Bacteria 2553
239 Ga0495683_0044587 3300047323 Bacteria 2230
240 Ga0495687_000343 3300047443 Bacteria 59599
241 Ga0495687_001473 3300047443 Bacteria 21559
242 Ga0495687_001864 3300047443 Bacteria 18327
243 Ga0495687_003928 3300047443 Bacteria 10415
244 Ga0495687_038507 3300047443 Bacteria 2121
245 Ga0495677_0001108 3300047445 Bacteria 10764
246 Ga0495677_0008533 3300047445 Bacteria 3804
247 Ga0495677_0010718 3300047445 Bacteria 3358
248 Ga0495685_000182 3300047447 Bacteria 20849
249 Ga0495673_0001831 3300047469 Bacteria 16045
250 Ga0495673_0010077 3300047469 Bacteria 5169
251 Ga0495681_0000695 3300047470 Bacteria 25705
252 Ga0495681_0006226 3300047470 Bacteria 7867
253 Ga0495681_0007514 3300047470 Bacteria 6945
254 Ga0495681_0022236 3300047470 Bacteria 3399
255 Ga0495686_0106672 3300047472 Bacteria 1684
256 Ga0495593_0014008 3300047673 Bacteria 4566
257 Ga0495614_0046630 3300048089 Bacteria 1858
258 Ga0495626_0000012 3300048091 Bacteria 258483
259 Ga0495626_0003714 3300048091 Bacteria 9645
260 Ga0495626_0006569 3300048091 Bacteria 6598
261 Ga0495626_0061041 3300048091 Bacteria 1716
262 Ga0495626_0063679 3300048091 Bacteria 1672
263 Ga0496102_0002302 3300048905 Bacteria 16319
264 Ga0496102_0297622 3300048905 Bacteria 1521
265 Ga0496103_0034143 3300048906 Bacteria 3110
266 Ga0496105_0104640 3300048908 Bacteria 2337
267 Ga0496106_0000140 3300048909 Bacteria 53893
268 Ga0496106_0156220 3300048909 Bacteria 1802
269 Ga0496107_0097440 3300048910 Bacteria 2153
270 Ga0496107_0263923 3300048910 Bacteria 1281
271 Ga0496110_0037400 3300048913 Bacteria 4219
272 Ga0496115_0029050 3300048918 Bacteria 4340
273 Ga0496116_0000231 3300048919 Bacteria 103493
274 Ga0496116_0011740 3300048919 Bacteria 7217
275 Ga0496116_0025531 3300048919 Bacteria 4342
276 Ga0496116_0079790 3300048919 Bacteria 2035
277 Ga0496117_0000460 3300048920 Bacteria 68039
278 Ga0496117_0002480 3300048920 Bacteria 23160
279 Ga0496117_0005335 3300048920 Bacteria 13552
280 Ga0496117_0080737 3300048920 Bacteria 2137
281 Ga0496118_0003562 3300048921 Bacteria 19427
282 Ga0496118_0006372 3300048921 Bacteria 13003
283 Ga0496118_0014116 3300048921 Bacteria 7494
284 Ga0496118_0047266 3300048921 Bacteria 3337
285 Ga0496118_0110176 3300048921 Bacteria 1830
286 Ga0496120_0024644 3300048923 Bacteria 3747
287 Ga0496121_0000153 3300048924 Bacteria 150635
288 Ga0496121_0001323 3300048924 Bacteria 42412
289 Ga0496121_0008909 3300048924 Bacteria 11651
290 Ga0496121_0020875 3300048924 Bacteria 6451
291 Ga0496121_0065624 3300048924 Bacteria 2952
292 Ga0496121_0066924 3300048924 Bacteria 2914
293 Ga0496121_0136778 3300048924 Bacteria 1824
294 Ga0496121_0141456 3300048924 Bacteria 1784
295 Ga0496122_0000186 3300048925 Bacteria 144012
296 Ga0496122_0002004 3300048925 Bacteria 30310
297 Ga0496122_0029519 3300048925 Bacteria 4624
298 Ga0496122_0090578 3300048925 Bacteria 2086
299 Ga0496123_0000162 3300048926 Bacteria 134316
300 Ga0496123_0022491 3300048926 Bacteria 4857
301 Ga0496124_0013054 3300048927 Bacteria 8136
302 Ga0496124_0164020 3300048927 Bacteria 1729
303 Ga0496124_0304161 3300048927 Bacteria 1150
304 Ga0496125_0000023 3300048928 Bacteria 449042
305 Ga0496125_0000233 3300048928 Bacteria 113820
306 Ga0496125_0001350 3300048928 Bacteria 36190
307 Ga0496125_0011517 3300048928 Bacteria 8836
308 Ga0496125_0020538 3300048928 Bacteria 6197
309 Ga0496125_0054922 3300048928 Bacteria 3251
310 Ga0496126_0000426 3300048929 Bacteria 84838
311 Ga0496126_0029499 3300048929 Bacteria 5212
312 Ga0496126_0051271 3300048929 Bacteria 3757
313 Ga0496126_0093062 3300048929 Bacteria 2647
314 Ga0496126_0238741 3300048929 Bacteria 1519
315 Ga0495678_000646 3300049459 Bacteria 32026
316 Ga0495678_002416 3300049459 Bacteria 12718
317 Ga0495678_038168 3300049459 Bacteria 1946
318 Ga0495682_0000496 3300049460 Bacteria 27218
319 Ga0495682_0000755 3300049460 Bacteria 20873
320 Ga0495682_0003020 3300049460 Bacteria 7649
321 Ga0495682_0031510 3300049460 Bacteria 1959
322 Ga0501034_0014521 3300049571 Bacteria 8110
323 Ga0501047_0252097 3300049581 Bacteria 1613
324 nmdc:mga03683_23539_c1 3300050489 Bacteria 2400
325 nmdc:mga05p37_47390_c1 3300050507 Bacteria 5285
326 Ga0500618_001214 3300053125 Bacteria 12186

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025920 Ga0207649_10149277 Ga0207649_101492773 283
2 3300046522 Ga0495643_0159248 Ga0495643_0159248_14_895 293
3 3300026075 Ga0207708_10332403 Ga0207708_103324031 301
4 iso_pu_bacteria 2856287931 2856294527 305
5 iso_pu_bacteria 2857357740 2857367900 305
6 3300009036 Ga0105244_10045536 Ga0105244_100455362 306
7 3300013102 Ga0157371_10189382 Ga0157371_101893821 306
8 3300013105 Ga0157369_10000268 Ga0157369_1000026810 306
9 3300020081 Ga0206354_10424944 Ga0206354_104249442 306
10 3300037418 Ga0395900_0000015 Ga0395900_0000015_326422_327348 306
11 3300037466 Ga0395898_0000346 Ga0395898_0000346_8201_9127 306
12 3300038443 Ga0395901_0097729 Ga0395901_0097729_579_1505 306
13 3300044658 Ga0466972_0014184 Ga0466972_0014184_1264_2229 306
14 3300048919 Ga0496116_0025531 Ga0496116_0025531_2984_3925 306
15 3300048921 Ga0496118_0014116 Ga0496118_0014116_1973_2914 306
16 3300048923 Ga0496120_0024644 Ga0496120_0024644_672_1613 306
17 3300048924 Ga0496121_0000153 Ga0496121_0000153_119574_120515 306
18 3300048924 Ga0496121_0136778 Ga0496121_0136778_60_1001 306
19 3300048925 Ga0496122_0000186 Ga0496122_0000186_66044_66985 306
20 3300048926 Ga0496123_0000162 Ga0496123_0000162_85508_86449 306
21 3300048926 Ga0496123_0022491 Ga0496123_0022491_399_1340 306
22 3300048928 Ga0496125_0000023 Ga0496125_0000023_86173_87114 306
23 3300048928 Ga0496125_0011517 Ga0496125_0011517_886_1827 306
24 3300048929 Ga0496126_0093062 Ga0496126_0093062_513_1454 306
25 3300028800 Ga0265338_10000708 Ga0265338_1000070813 307
26 3300037418 Ga0395900_0028321 Ga0395900_0028321_2207_3166 308
27 3300037466 Ga0395898_0011051 Ga0395898_0011051_2214_3173 308
28 3300038443 Ga0395901_0000121 Ga0395901_0000121_63883_64842 308
29 iso_pu_bacteria 2501025502 2501085824 308
30 iso_pu_bacteria 2510917013 2511088443 308
31 3300046507 Ga0495606_0001429 Ga0495606_0001429_1108_2055 310
32 3300046529 Ga0495652_0105579 Ga0495652_0105579_253_1209 310
33 3300046684 Ga0495669_0060622 Ga0495669_0060622_530_1477 310
34 3300046694 Ga0495649_0006189 Ga0495649_0006189_1198_2145 310
35 3300047319 Ga0495674_0204692 Ga0495674_0204692_581_1531 310
36 iso_pu_bacteria 8055225921 8055228823 311
37 3300025935 Ga0207709_10289318 Ga0207709_102893182 312
38 3300049571 Ga0501034_0014521 Ga0501034_0014521_712_1713 312
39 3300049581 Ga0501047_0252097 Ga0501047_0252097_303_1304 312
40 3300046452 Ga0495617_023305 Ga0495617_023305_533_1474 313
41 iso_pu_bacteria 2808606395 2809034231 313
42 iso_pu_bacteria 2831265667 2831270441 313
43 iso_pu_bacteria 2885198086 2885199727 313
44 iso_pu_bacteria 2885211737 2885213378 313
45 3300048905 Ga0496102_0297622 Ga0496102_0297622_33_989 314
46 3300048920 Ga0496117_0002480 Ga0496117_0002480_15399_16355 314
47 3300048921 Ga0496118_0003562 Ga0496118_0003562_6516_7472 314
48 3300048929 Ga0496126_0000426 Ga0496126_0000426_70739_71695 314
49 iso_pu_bacteria 8020938398 8020941434 314
50 3300005289 Ga0065704_10136320 Ga0065704_101363202 315
51 3300005353 Ga0070669_100033880 Ga0070669_1000338802 315
52 3300005354 Ga0070675_100035854 Ga0070675_1000358542 315
53 3300005539 Ga0068853_100098234 Ga0068853_1000982342 315
54 3300005543 Ga0070672_100408051 Ga0070672_1004080511 315
55 3300005985 Ga0081539_10016192 Ga0081539_100161922 315
56 3300006177 Ga0075362_10005546 Ga0075362_100055463 315
57 3300006946 Ga0079104_1000004 Ga0079104_100000472 315
58 3300009092 Ga0105250_10078413 Ga0105250_100784132 315
59 3300009093 Ga0105240_10005075 Ga0105240_1000507514 315
60 3300009147 Ga0114129_10030738 Ga0114129_100307382 315
61 3300009148 Ga0105243_10000547 Ga0105243_100005474 315
62 3300009148 Ga0105243_10178982 Ga0105243_101789821 315
63 3300009177 Ga0105248_10562741 Ga0105248_105627412 315
64 3300010375 Ga0105239_10000839 Ga0105239_1000083934 315
65 3300025711 Ga0207696_1042651 Ga0207696_10426512 315
66 3300025913 Ga0207695_10048688 Ga0207695_100486882 315
67 3300025935 Ga0207709_10000019 Ga0207709_10000019184 315
68 3300025940 Ga0207691_10065039 Ga0207691_100650394 315
69 3300026041 Ga0207639_10074372 Ga0207639_100743723 315
70 3300027111 Ga0209281_1000005 Ga0209281_1000005273 315
71 3300031731 Ga0307405_10030210 Ga0307405_100302103 315
72 3300031901 Ga0307406_10002603 Ga0307406_100026036 315
73 3300031911 Ga0307412_10013271 Ga0307412_100132714 315
74 3300042115 Ga0450911_003909 Ga0450911_003909_1188_2165 315
75 3300042134 Ga0450898_003121 Ga0450898_003121_741_1718 315
76 3300042876 Ga0451577_0174735 Ga0451577_0174735_694_1671 315
77 3300044673 Ga0453683_0086945 Ga0453683_0086945_480_1457 315
78 3300046491 Ga0495584_0072186 Ga0495584_0072186_270_1217 315
79 3300046492 Ga0495585_0000282 Ga0495585_0000282_38988_39935 315
80 3300046539 Ga0495621_0001548 Ga0495621_0001548_1447_2439 315
81 3300046539 Ga0495621_0040575 Ga0495621_0040575_358_1338 315
82 3300047320 Ga0495672_0008626 Ga0495672_0008626_2531_3493 315
83 3300047323 Ga0495683_0006620 Ga0495683_0006620_4580_5725 315
84 3300048920 Ga0496117_0080737 Ga0496117_0080737_106_1128 315
85 3300048921 Ga0496118_0006372 Ga0496118_0006372_943_1965 315
86 3300048925 Ga0496122_0090578 Ga0496122_0090578_992_1972 315
87 3300048928 Ga0496125_0000233 Ga0496125_0000233_3777_4757 315
88 3300050489 nmdc:mga03683_23539_c1 nmdc:mga03683_23539_c1_1189_2172 315
89 3300050507 nmdc:mga05p37_47390_c1 nmdc:mga05p37_47390_c1_3445_4416 315
90 iso_pu_bacteria 2547132374 2548498449 315
91 iso_pu_bacteria 2599185240 2599746722 315
92 iso_pu_bacteria 2599185355 2600208628 315
93 iso_pu_bacteria 2643221570 2643867006 315
94 iso_pu_bacteria 2643221596 2643992190 315
95 iso_pu_bacteria 2643221611 2644075899 315
96 iso_pu_bacteria 2643221652 2644294869 315
97 iso_pu_bacteria 2675903129 2676744284 315
98 iso_pu_bacteria 2721755523 2722884487 315
99 iso_pu_bacteria 2738543012 2739247213 315
100 iso_pu_bacteria 2839138175 2839143083 315
101 iso_pu_bacteria 2842718218 2842721061 315
102 iso_pu_bacteria 2863421361 2863424616 315
103 iso_pu_bacteria 2870068957 2870071450 315
104 iso_pu_bacteria 2928157003 2928160387 315
105 iso_pu_bacteria 2928163908 2928170633 315
106 iso_pu_bacteria 2981990288 2981996303 315
107 iso_pu_bacteria 641736154 642418205 315
108 iso_pu_bacteria 8020953355 8020957777 315
109 iso_pu_bacteria 8039098773 8039104851 315
110 3300046457 Ga0495590_0037151 Ga0495590_0037151_133_1083 316
111 3300046501 Ga0495607_0008631 Ga0495607_0008631_3829_4779 316
112 3300046506 Ga0495583_0006736 Ga0495583_0006736_737_1687 316
113 3300046507 Ga0495606_0000360 Ga0495606_0000360_19316_20269 316
114 3300046513 Ga0495616_0008459 Ga0495616_0008459_3255_4205 316
115 3300046538 Ga0495609_0000681 Ga0495609_0000681_19196_20146 316
116 3300046616 Ga0495668_0036502 Ga0495668_0036502_403_1353 316
117 3300046660 Ga0495625_0002739 Ga0495625_0002739_17440_18390 316
118 3300046664 Ga0495659_0005499 Ga0495659_0005499_1184_2134 316
119 3300046810 Ga0495660_0000868 Ga0495660_0000868_9442_10404 316
120 3300047318 Ga0495636_0061462 Ga0495636_0061462_509_1459 316
121 3300047445 Ga0495677_0008533 Ga0495677_0008533_2488_3438 316
122 3300047470 Ga0495681_0006226 Ga0495681_0006226_4248_5198 316
123 3300048924 Ga0496121_0001323 Ga0496121_0001323_26424_27374 316
124 3300048927 Ga0496124_0013054 Ga0496124_0013054_3693_4655 316
125 3300048928 Ga0496125_0020538 Ga0496125_0020538_2407_3357 316
126 3300048929 Ga0496126_0051271 Ga0496126_0051271_1835_2785 316
127 3300002067 JGI24735J21928_10002372 JGI24735J21928_100023723 317
128 3300003758 Ga0055532_1000190 Ga0055532_100019054 317
129 3300003758 Ga0055532_1000529 Ga0055532_100052915 317
130 3300003760 Ga0055527_1000291 Ga0055527_10002915 317
131 3300003761 Ga0055535_1000506 Ga0055535_100050616 317
132 3300003762 Ga0055542_1000502 Ga0055542_100050226 317
133 3300003763 Ga0055529_1000495 Ga0055529_100049516 317
134 3300005327 Ga0070658_10057021 Ga0070658_100570212 317
135 3300005339 Ga0070660_100001233 Ga0070660_1000012339 317
136 3300005366 Ga0070659_100000055 Ga0070659_10000005584 317
137 3300005563 Ga0068855_100146546 Ga0068855_1001465463 317
138 3300005616 Ga0068852_100013927 Ga0068852_1000139277 317
139 3300009011 Ga0105251_10012171 Ga0105251_100121713 317
140 3300009092 Ga0105250_10068026 Ga0105250_100680262 317
141 3300009093 Ga0105240_10000229 Ga0105240_10000229100 317
142 3300009093 Ga0105240_10023042 Ga0105240_100230422 317
143 3300009177 Ga0105248_10322547 Ga0105248_103225472 317
144 3300009545 Ga0105237_10097776 Ga0105237_100977764 317
145 3300010375 Ga0105239_10007284 Ga0105239_1000728411 317
146 3300013104 Ga0157370_10070692 Ga0157370_100706924 317
147 3300014497 Ga0182008_10123095 Ga0182008_101230952 317
148 3300015261 Ga0182006_1077464 Ga0182006_10774642 317
149 3300025228 Ga0209672_100080 Ga0209672_10008016 317
150 3300025229 Ga0209147_100071 Ga0209147_100071194 317
151 3300025229 Ga0209147_100091 Ga0209147_10009154 317
152 3300025242 Ga0209258_100082 Ga0209258_10008216 317
153 3300025254 Ga0209148_1000195 Ga0209148_100019578 317
154 3300025263 Ga0209565_1006597 Ga0209565_10065972 317
155 3300025272 Ga0209455_1000172 Ga0209455_100017278 317
156 3300025273 Ga0209673_1000076 Ga0209673_1000076107 317
157 3300025711 Ga0207696_1032074 Ga0207696_10320742 317
158 3300025735 Ga0207713_1021020 Ga0207713_10210203 317
159 3300025904 Ga0207647_10001075 Ga0207647_1000107514 317
160 3300025913 Ga0207695_10000268 Ga0207695_10000268113 317
161 3300025913 Ga0207695_10020055 Ga0207695_100200556 317
162 3300025914 Ga0207671_10028223 Ga0207671_100282232 317
163 3300025919 Ga0207657_10000087 Ga0207657_1000008781 317
164 3300025924 Ga0207694_10075553 Ga0207694_100755532 317
165 3300025932 Ga0207690_10000071 Ga0207690_1000007182 317
166 3300025941 Ga0207711_10216637 Ga0207711_102166372 317
167 3300025949 Ga0207667_10058539 Ga0207667_100585394 317
168 3300026067 Ga0207678_10104432 Ga0207678_101044322 317
169 3300026142 Ga0207698_10009359 Ga0207698_100093595 317
170 3300027312 Ga0209371_1000713 Ga0209371_100071318 317
171 3300030500 Ga0268256_1000608 Ga0268256_100060815 317
172 3300037312 Ga0395899_0016095 Ga0395899_0016095_1909_2877 317
173 3300037466 Ga0395898_0037403 Ga0395898_0037403_458_1426 317
174 3300038443 Ga0395901_0000769 Ga0395901_0000769_17642_18610 317
175 3300044656 Ga0466969_0006727 Ga0466969_0006727_1938_2912 317
176 3300044668 Ga0466980_0064119 Ga0466980_0064119_818_1792 317
177 3300046452 Ga0495617_002668 Ga0495617_002668_1338_2291 317
178 3300046457 Ga0495590_0016766 Ga0495590_0016766_1476_2447 317
179 3300046472 Ga0495580_0004305 Ga0495580_0004305_4909_5874 317
180 3300046472 Ga0495580_0014143 Ga0495580_0014143_2034_2990 317
181 3300046474 Ga0495605_0000470 Ga0495605_0000470_13796_14749 317
182 3300046474 Ga0495605_0047564 Ga0495605_0047564_793_1764 317
183 3300046474 Ga0495605_0095402 Ga0495605_0095402_57_1028 317
184 3300046491 Ga0495584_0000686 Ga0495584_0000686_5631_6584 317
185 3300046492 Ga0495585_0004671 Ga0495585_0004671_4305_5258 317
186 3300046500 Ga0495596_0000835 Ga0495596_0000835_11948_12919 317
187 3300046501 Ga0495607_0002943 Ga0495607_0002943_1981_2934 317
188 3300046501 Ga0495607_0007690 Ga0495607_0007690_3848_4801 317
189 3300046506 Ga0495583_0000008 Ga0495583_0000008_163833_164798 317
190 3300046506 Ga0495583_0000045 Ga0495583_0000045_147044_147997 317
191 3300046513 Ga0495616_0002483 Ga0495616_0002483_7412_8365 317
192 3300046515 Ga0495620_0012381 Ga0495620_0012381_1652_2623 317
193 3300046522 Ga0495643_0003881 Ga0495643_0003881_5139_6095 317
194 3300046523 Ga0495644_0000054 Ga0495644_0000054_45315_46268 317
195 3300046523 Ga0495644_0096463 Ga0495644_0096463_15_986 317
196 3300046524 Ga0495648_0001650 Ga0495648_0001650_13114_14067 317
197 3300046528 Ga0495642_0017500 Ga0495642_0017500_1236_2192 317
198 3300046531 Ga0495665_0096088 Ga0495665_0096088_392_1357 317
199 3300046531 Ga0495665_0181928 Ga0495665_0181928_56_1021 317
200 3300046538 Ga0495609_0000157 Ga0495609_0000157_42733_43686 317
201 3300046538 Ga0495609_0005556 Ga0495609_0005556_2138_3109 317
202 3300046542 Ga0495597_0004447 Ga0495597_0004447_2856_3827 317
203 3300046615 Ga0495656_0000900 Ga0495656_0000900_5909_6862 317
204 3300046615 Ga0495656_0001551 Ga0495656_0001551_2264_3217 317
205 3300046648 Ga0495611_0002446 Ga0495611_0002446_4905_5858 317
206 3300046648 Ga0495611_0088397 Ga0495611_0088397_418_1389 317
207 3300046660 Ga0495625_0001919 Ga0495625_0001919_15301_16254 317
208 3300046660 Ga0495625_0015881 Ga0495625_0015881_2124_3077 317
209 3300046664 Ga0495659_0000864 Ga0495659_0000864_6502_7455 317
210 3300046664 Ga0495659_0009135 Ga0495659_0009135_1529_2482 317
211 3300046665 Ga0495661_0005142 Ga0495661_0005142_5502_6458 317
212 3300046665 Ga0495661_0016364 Ga0495661_0016364_875_1831 317
213 3300046691 Ga0495670_0001337 Ga0495670_0001337_3665_4618 317
214 3300046692 Ga0495671_0001474 Ga0495671_0001474_4949_5902 317
215 3300046694 Ga0495649_0186273 Ga0495649_0186273_26_997 317
216 3300047318 Ga0495636_0000215 Ga0495636_0000215_17011_17964 317
217 3300047319 Ga0495674_0041074 Ga0495674_0041074_42_1007 317
218 3300047320 Ga0495672_0001300 Ga0495672_0001300_19601_20554 317
219 3300047323 Ga0495683_0002983 Ga0495683_0002983_4882_5847 317
220 3300047323 Ga0495683_0044587 Ga0495683_0044587_94_1065 317
221 3300047443 Ga0495687_001473 Ga0495687_001473_15064_16017 317
222 3300047443 Ga0495687_003928 Ga0495687_003928_4845_5810 317
223 3300047443 Ga0495687_038507 Ga0495687_038507_360_1316 317
224 3300047445 Ga0495677_0001108 Ga0495677_0001108_4996_5949 317
225 3300047445 Ga0495677_0010718 Ga0495677_0010718_1063_2034 317
226 3300047447 Ga0495685_000182 Ga0495685_000182_17256_18209 317
227 3300047469 Ga0495673_0010077 Ga0495673_0010077_3696_4667 317
228 3300047472 Ga0495686_0106672 Ga0495686_0106672_109_1062 317
229 3300047673 Ga0495593_0014008 Ga0495593_0014008_3207_4172 317
230 3300048091 Ga0495626_0061041 Ga0495626_0061041_599_1564 317
231 3300048091 Ga0495626_0063679 Ga0495626_0063679_503_1474 317
232 3300048905 Ga0496102_0002302 Ga0496102_0002302_9556_10527 317
233 3300048906 Ga0496103_0034143 Ga0496103_0034143_1509_2480 317
234 3300048909 Ga0496106_0000140 Ga0496106_0000140_39560_40561 317
235 3300048910 Ga0496107_0263923 Ga0496107_0263923_171_1142 317
236 3300048913 Ga0496110_0037400 Ga0496110_0037400_2998_3975 317
237 3300048919 Ga0496116_0011740 Ga0496116_0011740_768_1739 317
238 3300048919 Ga0496116_0079790 Ga0496116_0079790_692_1657 317
239 3300048921 Ga0496118_0110176 Ga0496118_0110176_53_1018 317
240 3300048924 Ga0496121_0008909 Ga0496121_0008909_1762_2763 317
241 3300048924 Ga0496121_0065624 Ga0496121_0065624_681_1652 317
242 3300048924 Ga0496121_0141456 Ga0496121_0141456_659_1624 317
243 3300048925 Ga0496122_0029519 Ga0496122_0029519_2560_3531 317
244 3300048927 Ga0496124_0164020 Ga0496124_0164020_416_1417 317
245 3300048927 Ga0496124_0304161 Ga0496124_0304161_63_1034 317
246 3300048928 Ga0496125_0054922 Ga0496125_0054922_554_1525 317
247 3300049459 Ga0495678_000646 Ga0495678_000646_18396_19349 317
248 3300049459 Ga0495678_038168 Ga0495678_038168_178_1149 317
249 3300049460 Ga0495682_0000496 Ga0495682_0000496_18862_19815 317
250 3300049460 Ga0495682_0003020 Ga0495682_0003020_2079_3044 317
251 3300049460 Ga0495682_0031510 Ga0495682_0031510_346_1299 317
252 iso_pu_bacteria 2501025501 2501076114 317
253 iso_pu_bacteria 2501025504 2501411945 317
254 iso_pu_bacteria 2510917014 2511100943 317
255 iso_pu_bacteria 2510917015 2511107292 317
256 iso_pu_bacteria 2515154189 2516020558 317
257 iso_pu_bacteria 2600255283 2601624125 317
258 iso_pu_bacteria 2883087390 2883089462 317
259 3300046506 Ga0495583_0000206 Ga0495583_0000206_80245_81201 318
260 3300046507 Ga0495606_0011489 Ga0495606_0011489_5536_6492 318
261 3300046518 Ga0495631_0016887 Ga0495631_0016887_1165_2121 318
262 3300046522 Ga0495643_0086591 Ga0495643_0086591_348_1304 318
263 3300046538 Ga0495609_0000107 Ga0495609_0000107_11754_12710 318
264 3300046648 Ga0495611_0002453 Ga0495611_0002453_7179_8135 318
265 3300046665 Ga0495661_0000006 Ga0495661_0000006_126096_127052 318
266 3300046691 Ga0495670_0023614 Ga0495670_0023614_89_1045 318
267 3300047320 Ga0495672_0067308 Ga0495672_0067308_877_1833 318
268 3300047323 Ga0495683_0034990 Ga0495683_0034990_217_1173 318
269 3300047470 Ga0495681_0000695 Ga0495681_0000695_8033_8989 318
270 3300048091 Ga0495626_0000012 Ga0495626_0000012_47881_48837 318
271 iso_pu_bacteria 2511231015 2511318938 318
272 iso_pu_bacteria 2511231017 2511333799 318
273 iso_pu_bacteria 2738543015 2739256992 318
274 iso_pu_bacteria 2931396565 2931401275 318
275 3300053125 Ga0500618_001214 Ga0500618_001214_8984_9982 319
276 3300046453 Ga0495627_001467 Ga0495627_001467_2842_3807 320
277 3300046458 Ga0495591_001621 Ga0495591_001621_2862_3827 320
278 3300046501 Ga0495607_0009093 Ga0495607_0009093_4002_4967 320
279 3300046512 Ga0495610_0015787 Ga0495610_0015787_241_1206 320
280 3300046519 Ga0495632_0002620 Ga0495632_0002620_2759_3724 320
281 3300046530 Ga0495654_0078951 Ga0495654_0078951_566_1531 320
282 3300046665 Ga0495661_0000154 Ga0495661_0000154_76562_77527 320
283 3300047470 Ga0495681_0007514 Ga0495681_0007514_2780_3745 320
284 3300047470 Ga0495681_0022236 Ga0495681_0022236_1235_2200 320
285 3300009011 Ga0105251_10000066 Ga0105251_1000006676 321
286 3300009092 Ga0105250_10000033 Ga0105250_100000338 321
287 3300014497 Ga0182008_10000089 Ga0182008_1000008965 321
288 3300042016 Ga0439463_000427 Ga0439463_000427_2282_3247 321
289 3300046458 Ga0495591_000224 Ga0495591_000224_40139_41104 321
290 3300046501 Ga0495607_0000047 Ga0495607_0000047_105414_106379 321
291 3300046530 Ga0495654_0000112 Ga0495654_0000112_63523_64488 321
292 3300046810 Ga0495660_0069611 Ga0495660_0069611_636_1601 321
293 2124908027 MRS2a_Contig_9668 MRS2a_00528470 322
294 3300005288 Ga0065714_10000930 Ga0065714_100009302 322
295 3300005290 Ga0065712_10012187 Ga0065712_100121872 322
296 3300005293 Ga0065715_10130471 Ga0065715_101304713 322
297 3300006058 Ga0075432_10007080 Ga0075432_100070803 322
298 3300011119 Ga0105246_10110028 Ga0105246_101100283 322
299 3300014497 Ga0182008_10007326 Ga0182008_100073266 322
300 3300017792 Ga0163161_10044607 Ga0163161_100446073 322
301 3300025256 Ga0209759_1004919 Ga0209759_10049193 322
302 3300025728 Ga0207655_1006992 Ga0207655_10069923 322
303 3300025735 Ga0207713_1000724 Ga0207713_100072414 322
304 3300027907 Ga0207428_10001135 Ga0207428_100011359 322
305 3300041407 Ga0439447_009243 Ga0439447_009243_502_1470 322
306 3300041411 Ga0439466_0007941 Ga0439466_0007941_2354_3322 322
307 3300046460 Ga0495638_0055622 Ga0495638_0055622_691_1659 322
308 3300046474 Ga0495605_0003778 Ga0495605_0003778_2310_3278 322
309 3300046506 Ga0495583_0004924 Ga0495583_0004924_5135_6103 322
310 3300046664 Ga0495659_0000002 Ga0495659_0000002_7360_8328 322
311 3300046694 Ga0495649_0000811 Ga0495649_0000811_4003_4971 322
312 3300046794 Ga0495589_0058795 Ga0495589_0058795_872_1840 322
313 3300047323 Ga0495683_0014523 Ga0495683_0014523_1223_2191 322
314 3300047443 Ga0495687_000343 Ga0495687_000343_29224_30192 322
315 3300048091 Ga0495626_0006569 Ga0495626_0006569_4374_5342 322
316 3300048908 Ga0496105_0104640 Ga0496105_0104640_760_1728 322
317 3300048909 Ga0496106_0156220 Ga0496106_0156220_252_1220 322
318 3300048910 Ga0496107_0097440 Ga0496107_0097440_1015_1983 322
319 3300048919 Ga0496116_0000231 Ga0496116_0000231_29413_30381 322
320 3300048920 Ga0496117_0005335 Ga0496117_0005335_355_1323 322
321 3300048921 Ga0496118_0047266 Ga0496118_0047266_1846_2814 322
322 3300048924 Ga0496121_0020875 Ga0496121_0020875_3257_4225 322
323 3300048925 Ga0496122_0002004 Ga0496122_0002004_2378_3346 322
324 3300046506 Ga0495583_0000281 Ga0495583_0000281_57018_57992 323
325 3300046512 Ga0495610_0011451 Ga0495610_0011451_1628_2602 323
326 3300046519 Ga0495632_0000037 Ga0495632_0000037_148033_149007 323
327 3300046665 Ga0495661_0000057 Ga0495661_0000057_113602_114576 323
328 3300048920 Ga0496117_0000460 Ga0496117_0000460_11139_12164 323
329 3300048929 Ga0496126_0029499 Ga0496126_0029499_523_1548 323
330 2124908027 MRS2a_Contig_127 MRS2a_00027960 324
331 3300013308 Ga0157375_10147339 Ga0157375_101473393 324
332 3300015261 Ga0182006_1007583 Ga0182006_10075832 324
333 3300015265 Ga0182005_1003309 Ga0182005_10033095 324
334 3300041405 Ga0439438_006409 Ga0439438_006409_2992_3966 324
335 3300042009 Ga0439451_008704 Ga0439451_008704_692_1666 324
336 3300042010 Ga0439452_004263 Ga0439452_004263_1576_2550 324
337 3300046457 Ga0495590_0006547 Ga0495590_0006547_793_1767 324
338 3300046474 Ga0495605_0002522 Ga0495605_0002522_7370_8344 324
339 3300046491 Ga0495584_0001410 Ga0495584_0001410_9135_10109 324
340 3300046501 Ga0495607_0005502 Ga0495607_0005502_3369_4343 324
341 3300046513 Ga0495616_0000456 Ga0495616_0000456_11107_12081 324
342 3300046519 Ga0495632_0001836 Ga0495632_0001836_8318_9292 324
343 3300046520 Ga0495637_0001050 Ga0495637_0001050_5440_6414 324
344 3300046522 Ga0495643_0005109 Ga0495643_0005109_5041_6015 324
345 3300046526 Ga0495666_0061527 Ga0495666_0061527_76_1050 324
346 3300046528 Ga0495642_0001123 Ga0495642_0001123_8147_9121 324
347 3300046538 Ga0495609_0000552 Ga0495609_0000552_23360_24334 324
348 3300046557 Ga0495622_0060735 Ga0495622_0060735_349_1323 324
349 3300046660 Ga0495625_0044650 Ga0495625_0044650_973_1947 324
350 3300046691 Ga0495670_0025097 Ga0495670_0025097_1015_1989 324
351 3300046694 Ga0495649_0000106 Ga0495649_0000106_23369_24343 324
352 3300046794 Ga0495589_0013424 Ga0495589_0013424_2112_3086 324
353 3300046810 Ga0495660_0020126 Ga0495660_0020126_830_1804 324
354 3300047318 Ga0495636_0000825 Ga0495636_0000825_3446_4420 324
355 3300047319 Ga0495674_0003028 Ga0495674_0003028_5434_6408 324
356 3300047320 Ga0495672_0000987 Ga0495672_0000987_23186_24160 324
357 3300047323 Ga0495683_0001830 Ga0495683_0001830_1217_2191 324
358 3300047443 Ga0495687_001864 Ga0495687_001864_9124_10098 324
359 3300047469 Ga0495673_0001831 Ga0495673_0001831_10808_11782 324
360 3300048089 Ga0495614_0046630 Ga0495614_0046630_553_1527 324
361 3300048091 Ga0495626_0003714 Ga0495626_0003714_5716_6690 324
362 3300048918 Ga0496115_0029050 Ga0496115_0029050_87_1061 324
363 3300048924 Ga0496121_0066924 Ga0496121_0066924_1274_2248 324
364 3300048928 Ga0496125_0001350 Ga0496125_0001350_1895_2869 324
365 3300048929 Ga0496126_0238741 Ga0496126_0238741_397_1371 324
366 3300049459 Ga0495678_002416 Ga0495678_002416_8273_9247 324
367 3300049460 Ga0495682_0000755 Ga0495682_0000755_3383_4357 324

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00682

HMGL-like

HMGL-like

3

278

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
6nds-assembly1.cif.gz_A-2 structure of an hmg-coa lyase from acenitobacter baumannii in complex with coenzyme a and 3-methylmalate 0.959 5 304
3mp5-assembly3.cif.gz_E crystal structure of human lyase r41m in complex with hmg-coa 0.9571 2 294
1ydo-assembly1.cif.gz_A crystal structure of the bacillis subtilis hmg-coa lyase, northeast structural genomics target sr181. 0.9567 1 293
2cw6-assembly1.cif.gz_A crystal structure of human hmg-coa lyase: insights into catalysis and the molecular basis for hydroxymethylglutaric aciduria 0.9563 2 294
3mp5-assembly2.cif.gz_C crystal structure of human lyase r41m in complex with hmg-coa 0.9563 2 295
ID Description Score Start End Superfamily
af_Q0JNR8_151_451_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9562 3 294 3.20.20.70
1ydoB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9542 5 293 3.20.20.70
af_Q4DFZ0_10_135_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9419 6 124 3.20.20.70
af_Q4DIQ4_8_322_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9355 3 284 3.20.20.70
1ydoB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9257 5 293 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A5C7A604-F1-model_v4 Hydroxymethylglutaryl-CoA lyase 0.9923 4 198 GO:0004419
GO:0006552
GO:0046872
GO:0046951
AF-A0A2D7XC08-F1-model_v4 Hydroxymethylglutaryl-CoA lyase 0.9867 1 199 GO:0004419
GO:0006552
GO:0046872
GO:0046951
AF-A0A254PXD9-F1-model_v4 Hydroxymethylglutaryl-CoA lyase 0.9837 3 304 GO:0004419
GO:0006552
GO:0046872
GO:0046951
AF-A0A0N8PSJ7-F1-model_v4 Hydroxymethylglutaryl-CoA lyase 0.9837 5 208 GO:0004419
GO:0006552
GO:0046872
GO:0046951
AF-Q3TPS7-F1-model_v4 hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) 0.9804 6 141 GO:0004419
GO:0016020
GO:0046872

Feature Viewer

pLDDT pTM Quality
92.34 0.89 High
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Predicted Structure (AlphaFold2)

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