F421361

General Info

Members Datasets Scaffolds Average Seq Length
358 277 266 304

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2858950400|2858954688
Length 359
Sequence SASPALAAALLFGASTPFAKTLVEGVAPLLLAGLLYLGSGLGLGILLALRHIGRGHSPGDAPGLRIPRADLPWLAGAIATGGVLGPALLMLGLTQTSGASASLLLNIEGVLTAIIAWCVFKENADRQIVLGMVAIVLGGVLLSWEPGGTAPSPGALLIVGACLCWAIDNNLTRRVATNDAMLIAGLKGLSAGAVSTILALLGGAELPPVTMVGASLVVGFLGYGLSLTLFVLALRTLGTARTGAYFSVAPLVGVIISFILWPENPGLLFWPAAALMALGVWLHLRERHAHDHTHEAMEHSHRHVHDEHHQHAHPFAWDGAEPHTHPHRHEALTHTHPHYPDIHHRHRHGPGHGIRARKA

Samples

Sample ID Description Type Environment
1 2124908027 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v1 Metagenome Rhizosphere
2 2509276022 Mesorhizobium australicum WSM2073 Isolate Nodule
3 2510065059 Mesorhizobium ciceri WSM4083 Isolate Nodule
4 2511231007 Pseudomonas sp. GM18 Isolate Nodule
5 2511231016 Pseudomonas sp. GM50 Isolate Nodule
6 2511231022 Pseudomonas sp. GM79 Isolate Nodule
7 2511231221 Azospirillum lipoferum 4B Isolate Rhizosphere
8 2512047030 Paraburkholderia tuberum STM678 Isolate Nodule
9 2513237082 Paraburkholderia mimosarum STM3621 Isolate Nodule
10 2513237166 Paraburkholderia azotifigens UYPR1.413 Isolate Nodule
11 2515154123 Trinickia symbiotica JPY347 Isolate Nodule
12 2519103095 Burkholderia sp. KJ006 Isolate Nodule
13 2526164713 Paraburkholderia phenoliruptrix JPY366 Isolate Nodule
14 2582581311 Burkholderia sp. WP42 Isolate Rhizosphere
15 2596583598 Ralstonia sp. UNCCL144 Isolate Unclassified
16 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
17 2599185355 Burkholderia sp. NFACC33-1 Isolate Rhizoplane
18 2623620446 Pseudomonas sp. GR 6-02 Isolate Unclassified
19 2643221596 Acidovorax sp. Root70 Isolate Unclassified
20 2643221602 Pseudomonas sp. Root71 Isolate Unclassified
21 2675903129 Burkholderia pyrrocinia NFIX32 Isolate Rhizoplane
22 2738541275 Novosphingobium sp. GV027 Isolate Unclassified
23 2738541301 Novosphingobium sp. GV079 Isolate Unclassified
24 2738541304 Novosphingobium sp. GV061 Isolate Unclassified
25 2738543022 Novosphingobium sp. GV055 Isolate Unclassified
26 2738543033 Novosphingobium sp. GV064 Isolate Unclassified
27 2773857670 Pseudomonas sp. 478 Isolate Unclassified
28 2784132072 Pseudomonas sp. 460 Isolate Unclassified
29 2808606382 Pseudomonas sp. SJZ080 Isolate Rhizosphere
30 2816332256 Burkholderia vietnamiensis MSMB608WGS Isolate Unclassified
31 2816332286 Burkholderia vietnamiensis HI2221 Isolate Rhizosphere
32 2818991452 Burkholderia cepacia 561 Isolate Unclassified
33 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
34 2844009547 Mesorhizobium sp. M7A.F.Ce.TU.012.03.2.1 Isolate Nodule
35 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
36 2858950400 Achromobacter sp. K91 Isolate Unclassified
37 2869169390 Mesorhizobium sp. M7A.F.Ca.CA.001.10.2.1 Isolate Nodule
38 2869234852 Mesorhizobium sp. M7A.T.Ca.US.000.02.2.1 Isolate Nodule
39 2869242130 Mesorhizobium sp. M7A.F.Ca.CA.004.11.2.1 Isolate Nodule
40 2870068957 Burkholderia sp. JP2-270 Isolate Unclassified
41 2871435913 Mesorhizobium sp. M7A.F.Ca.MR.228.00.0.0 Isolate Nodule
42 2871451962 Mesorhizobium sp. M7A.F.Ca.US.006.01.1.1 Isolate Nodule
43 2871481445 Mesorhizobium sp. M7A.F.Ca.CA.004.02.1.1 Isolate Nodule
44 2874109183 Mesorhizobium sp. M7A.T.Ca.TU.009.02.1.1 Isolate Nodule
45 2874116593 Mesorhizobium sp. M7A.F.Ca.CA.004.08.2.1 Isolate Nodule
46 2876386047 Mesorhizobium sp. M7A.F.Ca.CA.004.07.1.1 Isolate Nodule
47 2876420981 Mesorhizobium sp. M7A.F.Ca.CA.004.08.1.1 Isolate Nodule
48 2884411467 Dyella sp. AD56 Isolate Rhizosphere
49 2895395659 Rhodanobacter sp. T12-5 Isolate Unclassified
50 2902682994 Paraburkholderia atlantica CNPSo 3155 Isolate Unclassified
51 2903513507 Mesorhizobium sp. M7A.T.Ca.TU.009.01.1.2 Isolate Nodule
52 2904571731 Burkholderia cenocepacia 574 Isolate Unclassified
53 2904615490 Paraburkholderia franconis CNPSo 3157 Isolate Unclassified
54 2906401398 Mesorhizobium sp. M7A.F.Ca.CA.004.10.1.1 Isolate Nodule
55 2906427513 Mesorhizobium sp. M7A.F.Ca.CA.004.05.1.1 Isolate Nodule
56 2919697872 Pseudomonas frederiksbergensis 4169 Isolate Unclassified
57 2921643360 Paraburkholderia steynii HC1.1ba Isolate Nodule
58 2924710171 Mesorhizobium sp. M7A.T.Ca.TU.009.01.3.2 Isolate Nodule
59 2924741084 Mesorhizobium sp. M7A.F.Ca.CA.004.09.1.2 Isolate Nodule
60 2928170801 Burkholderia sp. 572 Isolate Unclassified
61 2928536128 Burkholderia sola 565 Isolate Unclassified
62 2935608549 Bradyrhizobium sp. RT6a Isolate Nodule
63 2935819856 Bradyrhizobium sp. RT3b Isolate Nodule
64 2937861824 Mesorhizobium sp. M7A.F.Ca.CA.001.07.2.1 Isolate Nodule
65 2937980651 Mesorhizobium sp. M7A.F.Ca.CA.004.04.2.1 Isolate Nodule
66 2958108152 Mesorhizobium sp. M7A.F.Ca.CA.004.11.1.1 Isolate Nodule
67 2961183825 Mesorhizobium sp. M7A.F.Ca.CA.001.12.1.1 Isolate Nodule
68 2968138860 Mesorhizobium sp. M7A.F.Ca.ET.027.03.2.1 Isolate Nodule
69 2970510686 Mesorhizobium sp. M7A.F.Ca.MR.148.00.0.0 Isolate Nodule
70 2970619444 Mesorhizobium sp. M7A.F.Ca.ET.027.02.1.1 Isolate Nodule
71 2970627176 Mesorhizobium sp. M7A.F.Ca.US.006.01.2.1 Isolate Nodule
72 2977851361 Mesorhizobium sp. M7A.F.Ca.CA.004.06.2.1 Isolate Nodule
73 2977898635 Mesorhizobium sp. M7A.T.Ca.TU.009.01.3.1 Isolate Nodule
74 2977907340 Mesorhizobium sp. M7A.F.Ca.CA.004.12.1.1 Isolate Nodule
75 2979772303 Mesorhizobium sp. M7A.F.Ca.CA.004.04.1.1 Isolate Nodule
76 2981990288 Burkholderia sp. PvR073 Isolate Rhizosphere
77 2996386984 Mesorhizobium sp. M7A.F.Ca.MR.245.00.0.0 Isolate Nodule
78 3002141150 Phyllobacterium sp. 628 Isolate Unclassified
79 3004232784 Mesorhizobium sp. M7A.T.Ca.US.000.02.1.1 Isolate Nodule
80 3004248173 Mesorhizobium sp. M7A.F.Ca.CA.004.06.1.1 Isolate Nodule
81 3004268573 Mesorhizobium sp. M7A.F.Ca.US.010.02.1.1 Isolate Nodule
82 3007511990 Pseudomonas fluorescens G20-18 Isolate Rhizosphere
83 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
84 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
85 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
86 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
87 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
88 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
89 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
90 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
91 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
92 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
93 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
94 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
95 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
96 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
97 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
98 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
99 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
100 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
101 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
102 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
103 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
104 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
105 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
106 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
107 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
108 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
109 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
110 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
111 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
112 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
113 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
114 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
115 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
116 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
117 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
118 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
119 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
120 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
121 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
122 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
123 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
124 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
125 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
126 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
127 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
128 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
129 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
130 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
131 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
132 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
133 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
134 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
135 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
136 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
137 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
138 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
139 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
140 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
141 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
142 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
143 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
144 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
145 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
146 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
147 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
148 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
149 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
150 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
151 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
152 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
153 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
154 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
155 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
156 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
157 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
158 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
159 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
160 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
161 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
162 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
163 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
164 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
165 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
166 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
167 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
168 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
169 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
170 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
171 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
172 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
173 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
174 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
175 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
176 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
177 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
178 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
179 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
180 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
181 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
182 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
183 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
184 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
185 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
186 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
187 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
188 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
189 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
190 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
191 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
192 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
193 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
194 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
195 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
196 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
197 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
198 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
199 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
200 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
201 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
202 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
203 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
204 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
205 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
206 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
207 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
208 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
209 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
210 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
211 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
212 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
213 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
214 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
215 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
216 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
217 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
218 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
219 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
220 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
221 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
222 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
223 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
224 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
225 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
226 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
227 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
228 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
229 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
230 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
231 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
232 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
233 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
234 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
235 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
236 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
237 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
238 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
239 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
240 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
241 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
242 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
243 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
244 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
245 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
246 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
247 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
248 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
249 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
250 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
251 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
252 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
253 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
254 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
255 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
256 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
257 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
258 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
259 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
260 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
261 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
262 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
263 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
264 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
265 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
266 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
267 8003400568 Cupriavidus gilardii USM5 Isolate Rhizosphere
268 8004727605 Mesorhizobium sp. M7A.F.Ca.CA.004.01.1.1 Isolate Nodule
269 8016622563 Bradyrhizobium sp. LB13.1 Isolate Nodule
270 8018845410 Burkholderia reimsis BE51 Isolate Rhizosphere
271 8019547302 Bradyrhizobium sp. LB1.3 Isolate Nodule
272 8019775933 Pseudomonas sp. PvR083 Isolate Rhizosphere
273 8020807995 Burkholderia sp. B10 Isolate Rhizosphere
274 8020945358 Burkholderia sp. BE17 Isolate Rhizosphere
275 8021120328 Burkholderia sp. LS-044 Isolate Rhizosphere
276 8040167225 Burkholderia vietnamiensis RS1 Isolate Unclassified
277 8040173305 Burkholderia vietnamiensis BE10 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 74.3
Metatranscriptomes 0
Isolates 25.7

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.94
Nodule 13.69
Rhizoplane 4.19
Rhizosphere 62.01
Stem 0
Stem Tuber 0
Unclassified 11.17

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 MRS2a_Contig_56 2124908027 Bacteria 59451
2 JGI25162J39368_1000053 3300002737 Bacteria 148653
3 JGI25157J39369_1001005 3300002741 Bacteria 13116
4 JGI25163J39215_1000199 3300002771 Bacteria 23396
5 JGI25164J39214_1000042 3300002772 Bacteria 126523
6 JGI25164J39214_1000080 3300002772 Bacteria 94261
7 JGI25164J39214_1000081 3300002772 Bacteria 93862
8 JGI25165J46597_1000060 3300003214 Bacteria 208907
9 JGI25153J46596_10011557 3300003215 Bacteria 3891
10 Ga0070680_100073520 3300005336 Bacteria 2812
11 Ga0070682_100050008 3300005337 Bacteria 2608
12 Ga0068868_100069122 3300005338 Bacteria 2814
13 Ga0070689_100138902 3300005340 Bacteria 1953
14 Ga0070669_100044329 3300005353 Bacteria 3241
15 Ga0070671_100006443 3300005355 Bacteria 9382
16 Ga0070674_100039884 3300005356 Bacteria 3173
17 Ga0070673_100002419 3300005364 Bacteria 11364
18 Ga0070713_100001409 3300005436 Bacteria 15418
19 Ga0070678_100163346 3300005456 Bacteria 1807
20 Ga0070681_10012110 3300005458 Bacteria 8553
21 Ga0068867_100010277 3300005459 Bacteria 6604
22 Ga0070672_100000753 3300005543 Bacteria 19243
23 Ga0070695_100014997 3300005545 Unclassified 4675
24 Ga0070665_100001781 3300005548 Bacteria 24533
25 Ga0070665_100077191 3300005548 Bacteria 3337
26 Ga0068855_100202932 3300005563 Bacteria 2231
27 Ga0068857_100128085 3300005577 Bacteria 2288
28 Ga0068857_100248677 3300005577 Bacteria 1630
29 Ga0068854_100129661 3300005578 Unclassified 1924
30 Ga0068859_100094354 3300005617 Bacteria 3044
31 Ga0068864_100023346 3300005618 Bacteria 5193
32 Ga0068861_100246168 3300005719 Bacteria 1523
33 Ga0068851_10079395 3300005834 Bacteria 1711
34 Ga0068870_10007596 3300005840 Bacteria 4845
35 Ga0081455_10025903 3300005937 Bacteria 5405
36 Ga0081540_1016579 3300005983 Bacteria 4601
37 Ga0075365_10003803 3300006038 Bacteria 7874
38 Ga0075368_10001024 3300006042 Bacteria 8735
39 Ga0075363_100010737 3300006048 Bacteria 4364
40 Ga0075364_10031762 3300006051 Bacteria 3392
41 Ga0075432_10003242 3300006058 Bacteria 5489
42 Ga0075362_10051817 3300006177 Bacteria 1838
43 Ga0075367_10030004 3300006178 Bacteria 3114
44 Ga0075369_10015439 3300006186 Bacteria 3065
45 Ga0075369_10053514 3300006186 Bacteria 1752
46 Ga0097621_100064471 3300006237 Bacteria 3013
47 Ga0068871_100008609 3300006358 Bacteria 7337
48 Ga0097620_100094345 3300006931 Bacteria 3044
49 Ga0105251_10040079 3300009011 Bacteria 2284
50 Ga0105244_10033371 3300009036 Bacteria 2714
51 Ga0105244_10059543 3300009036 Bacteria 1925
52 Ga0105240_10051856 3300009093 Bacteria 5160
53 Ga0105240_10512082 3300009093 Bacteria 1333
54 Ga0105237_10153271 3300009545 Bacteria 2301
55 Ga0105238_10009806 3300009551 Bacteria 9588
56 Ga0105249_10102492 3300009553 Bacteria 2694
57 Ga0157371_10009074 3300013102 Bacteria 7859
58 Ga0157370_10055927 3300013104 Bacteria 3756
59 Ga0157370_10179015 3300013104 Bacteria 1970
60 Ga0157378_10165654 3300013297 Bacteria 2070
61 Ga0163162_10133700 3300013306 Unclassified 2590
62 Ga0163162_10194288 3300013306 Bacteria 2158
63 Ga0157375_10084224 3300013308 Bacteria 3227
64 Ga0157375_10285003 3300013308 Bacteria 1815
65 Ga0157380_10000370 3300014326 Bacteria 27153
66 Ga0182008_10028242 3300014497 Bacteria 2837
67 Ga0157376_10073142 3300014969 Bacteria 2918
68 Ga0182006_1000235 3300015261 Bacteria 52295
69 Ga0182007_10002233 3300015262 Bacteria 9788
70 Ga0182007_10007475 3300015262 Bacteria 4576
71 Ga0182005_1007033 3300015265 Bacteria 3400
72 Ga0182005_1026158 3300015265 Bacteria 1592
73 Ga0163161_10021439 3300017792 Bacteria 4541
74 Ga0163161_10418302 3300017792 Bacteria 1078
75 Ga0209760_100013 3300025207 Bacteria 181451
76 Ga0209674_100744 3300025226 Bacteria 11096
77 Ga0207427_100011 3300025231 Bacteria 640076
78 Ga0209437_100025 3300025233 Bacteria 561333
79 Ga0209026_1000175 3300025250 Bacteria 98059
80 Ga0209129_1012123 3300025258 Bacteria 2004
81 Ga0209233_1000012 3300025261 Bacteria 1019519
82 Ga0209758_1000850 3300025297 Bacteria 42511
83 Ga0209050_1001616 3300025298 Bacteria 23171
84 Ga0209051_1020702 3300025303 Bacteria 2822
85 Ga0207655_1001543 3300025728 Bacteria 20805
86 Ga0207655_1002960 3300025728 Bacteria 13054
87 Ga0207713_1004239 3300025735 Bacteria 9370
88 Ga0207713_1014245 3300025735 Bacteria 4145
89 Ga0207645_10003566 3300025907 Bacteria 11777
90 Ga0207645_10031771 3300025907 Bacteria 3395
91 Ga0207643_10064707 3300025908 Bacteria 2093
92 Ga0207643_10100515 3300025908 Bacteria 1696
93 Ga0207695_10041290 3300025913 Bacteria 4938
94 Ga0207660_10132437 3300025917 Bacteria 1899
95 Ga0207657_10077498 3300025919 Bacteria 2801
96 Ga0207694_10017785 3300025924 Bacteria 5373
97 Ga0207650_10000485 3300025925 Bacteria 33124
98 Ga0207659_10000721 3300025926 Bacteria 19582
99 Ga0207659_10068624 3300025926 Bacteria 2579
100 Ga0207700_10055635 3300025928 Bacteria 2974
101 Ga0207690_10067299 3300025932 Bacteria 2456
102 Ga0207669_10025761 3300025937 Bacteria 3185
103 Ga0207691_10001761 3300025940 Bacteria 21317
104 Ga0207691_10002326 3300025940 Bacteria 18610
105 Ga0207667_10099071 3300025949 Bacteria 3007
106 Ga0207651_10001387 3300025960 Bacteria 10973
107 Ga0207712_10065676 3300025961 Bacteria 2591
108 Ga0207640_10117661 3300025981 Unclassified 1897
109 Ga0207639_10017175 3300026041 Bacteria 5129
110 Ga0207678_10377991 3300026067 Bacteria 1224
111 Ga0207708_10065806 3300026075 Unclassified 2771
112 Ga0207648_10000652 3300026089 Bacteria 38868
113 Ga0207648_10003455 3300026089 Bacteria 16571
114 Ga0207674_10035592 3300026116 Bacteria 5196
115 Ga0207674_10253331 3300026116 Bacteria 1707
116 Ga0209813_10005938 3300027866 Bacteria 2996
117 Ga0207428_10021683 3300027907 Bacteria 5435
118 Ga0268266_10001622 3300028379 Bacteria 26179
119 Ga0268266_10167892 3300028379 Bacteria 1990
120 Ga0307515_10055638 3300028794 Bacteria 5775
121 Ga0307408_100128457 3300031548 Unclassified 1974
122 Ga0395899_0008587 3300037312 Bacteria 7866
123 Ga0395899_0012754 3300037312 Bacteria 6440
124 Ga0395900_0325384 3300037418 Bacteria 1516
125 Ga0395905_0030887 3300037471 Bacteria 5045
126 Ga0395901_0013088 3300038443 Bacteria 8419
127 Ga0439466_0011288 3300041411 Bacteria 3306
128 Ga0439451_000466 3300042009 Bacteria 7878
129 Ga0439452_002179 3300042010 Bacteria 7404
130 Ga0495617_000146 3300046452 Bacteria 45559
131 Ga0495617_000510 3300046452 Bacteria 20313
132 Ga0495617_001347 3300046452 Bacteria 10899
133 Ga0495590_0000678 3300046457 Bacteria 15678
134 Ga0495590_0012346 3300046457 Bacteria 3171
135 Ga0495591_007275 3300046458 Bacteria 4737
136 Ga0495638_0008752 3300046460 Bacteria 7151
137 Ga0495638_0039092 3300046460 Bacteria 3013
138 Ga0495653_0229958 3300046463 Bacteria 1241
139 Ga0495650_0002550 3300046471 Bacteria 14477
140 Ga0495650_0006478 3300046471 Bacteria 7281
141 Ga0495582_0009290 3300046473 Bacteria 5423
142 Ga0495605_0000985 3300046474 Bacteria 19369
143 Ga0495605_0013199 3300046474 Bacteria 4562
144 Ga0495605_0026405 3300046474 Bacteria 3019
145 Ga0495639_0006694 3300046475 Bacteria 4958
146 Ga0495664_0044165 3300046477 Bacteria 2640
147 Ga0495584_0000370 3300046491 Bacteria 31057
148 Ga0495584_0018191 3300046491 Bacteria 3573
149 Ga0495585_0003021 3300046492 Bacteria 11595
150 Ga0495585_0004557 3300046492 Bacteria 8964
151 Ga0495594_0021296 3300046499 Bacteria 3460
152 Ga0495594_0025763 3300046499 Bacteria 3162
153 Ga0495594_0038881 3300046499 Bacteria 2599
154 Ga0495607_0000630 3300046501 Bacteria 34197
155 Ga0495607_0001153 3300046501 Bacteria 23925
156 Ga0495607_0001288 3300046501 Bacteria 22437
157 Ga0495583_0002503 3300046506 Bacteria 15572
158 Ga0495583_0021355 3300046506 Bacteria 3333
159 Ga0495610_0097844 3300046512 Bacteria 1319
160 Ga0495616_0001156 3300046513 Bacteria 18665
161 Ga0495616_0025386 3300046513 Bacteria 3166
162 Ga0495628_0020935 3300046516 Bacteria 5387
163 Ga0495631_0030203 3300046518 Bacteria 2459
164 Ga0495631_0097374 3300046518 Bacteria 1266
165 Ga0495632_0001346 3300046519 Bacteria 20643
166 Ga0495632_0001872 3300046519 Bacteria 16888
167 Ga0495637_0000721 3300046520 Bacteria 22609
168 Ga0495637_0002626 3300046520 Bacteria 9846
169 Ga0495643_0003703 3300046522 Bacteria 11072
170 Ga0495643_0010071 3300046522 Bacteria 5830
171 Ga0495643_0030151 3300046522 Bacteria 3030
172 Ga0495648_0022732 3300046524 Bacteria 4308
173 Ga0495648_0036744 3300046524 Bacteria 3154
174 Ga0495666_0016231 3300046526 Bacteria 3709
175 Ga0495666_0046457 3300046526 Bacteria 2093
176 Ga0495642_0000250 3300046528 Bacteria 30239
177 Ga0495642_0003258 3300046528 Bacteria 6426
178 Ga0495654_0001937 3300046530 Bacteria 13687
179 Ga0495654_0002115 3300046530 Bacteria 12972
180 Ga0495654_0106799 3300046530 Bacteria 1281
181 Ga0495586_0014731 3300046535 Bacteria 4155
182 Ga0495609_0005130 3300046538 Bacteria 6975
183 Ga0495609_0026066 3300046538 Bacteria 2676
184 Ga0495597_0004005 3300046542 Bacteria 8272
185 Ga0495597_0102120 3300046542 Bacteria 1208
186 Ga0495645_0020021 3300046543 Bacteria 4824
187 Ga0495622_0001156 3300046557 Bacteria 13715
188 Ga0495622_0081432 3300046557 Bacteria 1489
189 Ga0495611_0003201 3300046648 Bacteria 7252
190 Ga0495611_0034799 3300046648 Bacteria 2228
191 Ga0495625_0008965 3300046660 Bacteria 8448
192 Ga0495635_0036110 3300046663 Bacteria 3426
193 Ga0495659_0000504 3300046664 Bacteria 14401
194 Ga0495659_0001143 3300046664 Bacteria 9218
195 Ga0495659_0012946 3300046664 Bacteria 2710
196 Ga0495661_0001108 3300046665 Bacteria 23633
197 Ga0495646_0001267 3300046680 Bacteria 14846
198 Ga0495669_0041127 3300046684 Bacteria 2051
199 Ga0495613_0033897 3300046689 Bacteria 3792
200 Ga0495670_0000256 3300046691 Bacteria 24803
201 Ga0495670_0001331 3300046691 Bacteria 12053
202 Ga0495670_0048855 3300046691 Bacteria 2116
203 Ga0495671_0000094 3300046692 Bacteria 83635
204 Ga0495671_0016064 3300046692 Bacteria 4003
205 Ga0495649_0000164 3300046694 Bacteria 57766
206 Ga0495649_0000820 3300046694 Bacteria 24998
207 Ga0495589_0000388 3300046794 Bacteria 33652
208 Ga0495589_0043549 3300046794 Bacteria 2233
209 Ga0495660_0006459 3300046810 Bacteria 6933
210 Ga0495660_0024914 3300046810 Bacteria 3403
211 Ga0495660_0060006 3300046810 Bacteria 2044
212 Ga0495581_0024819 3300047315 Bacteria 3474
213 Ga0495636_0000119 3300047318 Bacteria 32610
214 Ga0495672_0006086 3300047320 Bacteria 9426
215 Ga0495672_0011393 3300047320 Bacteria 6279
216 Ga0495672_0033385 3300047320 Bacteria 3188
217 Ga0495680_0004958 3300047322 Bacteria 12594
218 Ga0495683_0003421 3300047323 Bacteria 9262
219 Ga0495683_0054591 3300047323 Bacteria 1990
220 Ga0495687_000802 3300047443 Bacteria 33867
221 Ga0495687_001275 3300047443 Bacteria 23717
222 Ga0495685_014116 3300047447 Bacteria 2712
223 Ga0495673_0000908 3300047469 Bacteria 27075
224 Ga0495673_0014726 3300047469 Bacteria 4058
225 Ga0495673_0024613 3300047469 Bacteria 2904
226 Ga0495593_0004221 3300047673 Bacteria 8544
227 Ga0495593_0125827 3300047673 Bacteria 1303
228 Ga0495626_0000665 3300048091 Bacteria 33080
229 Ga0495626_0000842 3300048091 Bacteria 27497
230 Ga0496102_0129250 3300048905 Bacteria 2363
231 Ga0496104_0017608 3300048907 Bacteria 6510
232 Ga0496105_0021750 3300048908 Bacteria 5191
233 Ga0496105_0041930 3300048908 Bacteria 3772
234 Ga0496105_0190463 3300048908 Bacteria 1677
235 Ga0496105_0219935 3300048908 Bacteria 1546
236 Ga0496109_0084521 3300048912 Bacteria 2928
237 Ga0496111_0005004 3300048914 Bacteria 8432
238 Ga0496112_0049892 3300048915 Unclassified 4103
239 Ga0496112_0077343 3300048915 Bacteria 3291
240 Ga0496112_0378075 3300048915 Bacteria 1358
241 Ga0496114_0017016 3300048917 Bacteria 5863
242 Ga0496114_0110921 3300048917 Bacteria 2350
243 Ga0496116_0000730 3300048919 Bacteria 41965
244 Ga0496117_0048139 3300048920 Bacteria 3049
245 Ga0496118_0059154 3300048921 Bacteria 2856
246 Ga0496118_0066920 3300048921 Bacteria 2620
247 Ga0496121_0003246 3300048924 Bacteria 23384
248 Ga0496122_0004049 3300048925 Bacteria 18602
249 Ga0496123_0029484 3300048926 Bacteria 4038
250 Ga0496124_0018698 3300048927 Bacteria 6482
251 Ga0496124_0104050 3300048927 Bacteria 2295
252 Ga0496125_0165121 3300048928 Bacteria 1497
253 Ga0495678_000610 3300049459 Bacteria 33535
254 Ga0495678_001623 3300049459 Bacteria 17133
255 Ga0495678_073814 3300049459 Bacteria 1242
256 Ga0495682_0033144 3300049460 Bacteria 1907
257 Ga0495682_0035290 3300049460 Bacteria 1842
258 Ga0495682_0052953 3300049460 Bacteria 1474
259 Ga0501292_012269 3300049515 Bacteria 1306
260 nmdc:mga03683_38021_c1 3300050489 Bacteria 1964
261 nmdc:mga03n38_34168_c1 3300050490 Bacteria 2169
262 nmdc:mga00v17_8475_c1 3300050491 Bacteria 3196
263 nmdc:mga06z11_3541_c1 3300050494 Bacteria 6053
264 nmdc:mga04h51_4670_c1 3300050495 Bacteria 3428
265 nmdc:mga0sz30_6362_c1 3300050516 Bacteria 4384
266 Ga0500616_0019808 3300053153 Bacteria 3789

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005336 Ga0070680_100073520 Ga0070680_1000735203 229
2 3300005617 Ga0068859_100094354 Ga0068859_1000943543 229
3 3300006931 Ga0097620_100094345 Ga0097620_1000943453 229
4 3300025917 Ga0207660_10132437 Ga0207660_101324372 229
5 iso_pu_bacteria 2906427513 2906435669 256
6 3300009553 Ga0105249_10102492 Ga0105249_101024921 259
7 3300013306 Ga0163162_10133700 Ga0163162_101337004 259
8 3300025961 Ga0207712_10065676 Ga0207712_100656761 259
9 3300026075 Ga0207708_10065806 Ga0207708_100658064 259
10 3300049515 Ga0501292_012269 Ga0501292_012269_15_1046 262
11 3300005548 Ga0070665_100077191 Ga0070665_1000771913 264
12 3300028379 Ga0268266_10167892 Ga0268266_101678922 264
13 iso_pu_bacteria 2902682994 2902684283 265
14 3300005937 Ga0081455_10025903 Ga0081455_100259033 268
15 3300005983 Ga0081540_1016579 Ga0081540_10165792 268
16 3300006038 Ga0075365_10003803 Ga0075365_100038033 268
17 3300006042 Ga0075368_10001024 Ga0075368_100010244 268
18 3300006048 Ga0075363_100010737 Ga0075363_1000107372 268
19 3300006051 Ga0075364_10031762 Ga0075364_100317623 268
20 3300006178 Ga0075367_10030004 Ga0075367_100300043 268
21 3300006186 Ga0075369_10053514 Ga0075369_100535142 268
22 3300027866 Ga0209813_10005938 Ga0209813_100059382 268
23 3300031548 Ga0307408_100128457 Ga0307408_1001284571 268
24 3300048907 Ga0496104_0017608 Ga0496104_0017608_528_1589 268
25 3300048908 Ga0496105_0021750 Ga0496105_0021750_1252_2313 268
26 3300048908 Ga0496105_0219935 Ga0496105_0219935_466_1521 268
27 3300048912 Ga0496109_0084521 Ga0496109_0084521_254_1315 268
28 3300048915 Ga0496112_0378075 Ga0496112_0378075_82_1143 268
29 3300048917 Ga0496114_0017016 Ga0496114_0017016_1735_2790 268
30 3300048917 Ga0496114_0110921 Ga0496114_0110921_512_1573 268
31 3300050490 nmdc:mga03n38_34168_c1 nmdc:mga03n38_34168_c1_576_1628 268
32 3300050491 nmdc:mga00v17_8475_c1 nmdc:mga00v17_8475_c1_1970_3022 268
33 3300050494 nmdc:mga06z11_3541_c1 nmdc:mga06z11_3541_c1_4286_5338 268
34 3300050495 nmdc:mga04h51_4670_c1 nmdc:mga04h51_4670_c1_1393_2445 268
35 iso_pu_bacteria 2597490356 2599103007 269
36 iso_pu_bacteria 2846952575 2846952881 269
37 3300005337 Ga0070682_100050008 Ga0070682_1000500082 270
38 3300005563 Ga0068855_100202932 Ga0068855_1002029322 270
39 3300005577 Ga0068857_100248677 Ga0068857_1002486772 270
40 3300013104 Ga0157370_10055927 Ga0157370_100559274 270
41 3300025919 Ga0207657_10077498 Ga0207657_100774984 270
42 3300025924 Ga0207694_10017785 Ga0207694_100177852 270
43 3300025932 Ga0207690_10067299 Ga0207690_100672992 270
44 3300025949 Ga0207667_10099071 Ga0207667_100990713 270
45 3300026041 Ga0207639_10017175 Ga0207639_100171752 270
46 3300026116 Ga0207674_10253331 Ga0207674_102533312 270
47 3300014326 Ga0157380_10000370 Ga0157380_1000037010 271
48 3300028794 Ga0307515_10055638 Ga0307515_100556383 271
49 3300037312 Ga0395899_0012754 Ga0395899_0012754_431_1495 271
50 3300053153 Ga0500616_0019808 Ga0500616_0019808_831_1892 271
51 iso_pu_bacteria 2935608549 2935613662 271
52 iso_pu_bacteria 2935819856 2935821849 271
53 iso_pu_bacteria 8016622563 8016623295 271
54 iso_pu_bacteria 8019547302 8019550317 271
55 3300003215 JGI25153J46596_10011557 JGI25153J46596_100115573 272
56 3300005577 Ga0068857_100128085 Ga0068857_1001280852 272
57 3300005840 Ga0068870_10007596 Ga0068870_100075965 272
58 3300009093 Ga0105240_10051856 Ga0105240_100518561 272
59 3300009093 Ga0105240_10512082 Ga0105240_105120822 272
60 3300009551 Ga0105238_10009806 Ga0105238_100098069 272
61 3300013297 Ga0157378_10165654 Ga0157378_101656542 272
62 3300025258 Ga0209129_1012123 Ga0209129_10121232 272
63 3300025297 Ga0209758_1000850 Ga0209758_100085037 272
64 3300025907 Ga0207645_10003566 Ga0207645_100035666 272
65 3300025908 Ga0207643_10064707 Ga0207643_100647072 272
66 3300025913 Ga0207695_10041290 Ga0207695_100412906 272
67 3300025926 Ga0207659_10068624 Ga0207659_100686243 272
68 3300025940 Ga0207691_10001761 Ga0207691_1000176121 272
69 3300026089 Ga0207648_10000652 Ga0207648_1000065211 272
70 3300026116 Ga0207674_10035592 Ga0207674_100355922 272
71 iso_pu_bacteria 2509276022 2509395267 272
72 iso_pu_bacteria 2510065059 2510313992 272
73 iso_pu_bacteria 2511231221 2512034664 272
74 iso_pu_bacteria 2844009547 2844013039 272
75 iso_pu_bacteria 2869169390 2869172772 272
76 iso_pu_bacteria 2869234852 2869241198 272
77 iso_pu_bacteria 2869242130 2869244623 272
78 iso_pu_bacteria 2871435913 2871437955 272
79 iso_pu_bacteria 2871451962 2871459561 272
80 iso_pu_bacteria 2871481445 2871485154 272
81 iso_pu_bacteria 2874109183 2874116240 272
82 iso_pu_bacteria 2874116593 2874118320 272
83 iso_pu_bacteria 2876386047 2876386409 272
84 iso_pu_bacteria 2876420981 2876426691 272
85 iso_pu_bacteria 2903513507 2903515258 272
86 iso_pu_bacteria 2906401398 2906407792 272
87 iso_pu_bacteria 2924710171 2924713319 272
88 iso_pu_bacteria 2924741084 2924744861 272
89 iso_pu_bacteria 2937861824 2937865222 272
90 iso_pu_bacteria 2937980651 2937980653 272
91 iso_pu_bacteria 2958108152 2958108457 272
92 iso_pu_bacteria 2961183825 2961183897 272
93 iso_pu_bacteria 2968138860 2968140760 272
94 iso_pu_bacteria 2970510686 2970511196 272
95 iso_pu_bacteria 2970619444 2970619579 272
96 iso_pu_bacteria 2970627176 2970628519 272
97 iso_pu_bacteria 2977851361 2977852202 272
98 iso_pu_bacteria 2977898635 2977906475 272
99 iso_pu_bacteria 2977907340 2977914789 272
100 iso_pu_bacteria 2979772303 2979777727 272
101 iso_pu_bacteria 2996386984 2996388540 272
102 iso_pu_bacteria 3004232784 3004232852 272
103 iso_pu_bacteria 3004248173 3004254567 272
104 iso_pu_bacteria 3004268573 3004272744 272
105 iso_pu_bacteria 8004727605 8004733584 272
106 3300026067 Ga0207678_10377991 Ga0207678_103779911 273
107 iso_pu_bacteria 2821268502 2821270897 273
108 iso_pu_bacteria 3002141150 3002144176 273
109 3300005548 Ga0070665_100001781 Ga0070665_1000017816 274
110 iso_pu_bacteria 2738541275 2738712982 274
111 iso_pu_bacteria 2738541301 2738851406 274
112 iso_pu_bacteria 2738541304 2738867136 274
113 iso_pu_bacteria 2738543022 2739299653 274
114 iso_pu_bacteria 2738543033 2739361332 274
115 3300028379 Ga0268266_10001622 Ga0268266_1000162225 275
116 3300037312 Ga0395899_0008587 Ga0395899_0008587_2731_3780 275
117 3300037418 Ga0395900_0325384 Ga0395900_0325384_128_1177 275
118 3300037471 Ga0395905_0030887 Ga0395905_0030887_128_1177 275
119 3300038443 Ga0395901_0013088 Ga0395901_0013088_4774_5823 275
120 iso_pu_bacteria 2596583598 2597032640 275
121 iso_pu_bacteria 2858950400 2858954688 275
122 iso_pu_bacteria 2921643360 2921646389 275
123 iso_pu_bacteria 8003400568 8003404209 275
124 3300009545 Ga0105237_10153271 Ga0105237_101532712 276
125 3300046477 Ga0495664_0044165 Ga0495664_0044165_940_1995 276
126 3300046543 Ga0495645_0020021 Ga0495645_0020021_629_1684 276
127 3300048905 Ga0496102_0129250 Ga0496102_0129250_48_1103 276
128 3300048908 Ga0496105_0041930 Ga0496105_0041930_175_1230 276
129 iso_pu_bacteria 2511231007 2511269332 276
130 iso_pu_bacteria 2511231016 2511323869 276
131 iso_pu_bacteria 2511231022 2511366041 276
132 iso_pu_bacteria 2519103095 2519462371 276
133 iso_pu_bacteria 2526164713 2527077295 276
134 iso_pu_bacteria 2582581311 2585295082 276
135 iso_pu_bacteria 2599185355 2600208181 276
136 iso_pu_bacteria 2623620446 2624490061 276
137 iso_pu_bacteria 2643221596 2643992132 276
138 iso_pu_bacteria 2643221602 2644022814 276
139 iso_pu_bacteria 2675903129 2676743863 276
140 iso_pu_bacteria 2773857670 2774123306 276
141 iso_pu_bacteria 2784132072 2784315830 276
142 iso_pu_bacteria 2808606382 2808958361 276
143 iso_pu_bacteria 2816332256 2817276674 276
144 iso_pu_bacteria 2816332286 2817452758 276
145 iso_pu_bacteria 2818991452 2819637244 276
146 iso_pu_bacteria 2870068957 2870075922 276
147 iso_pu_bacteria 2904571731 2904573833 276
148 iso_pu_bacteria 2919697872 2919702138 276
149 iso_pu_bacteria 2928170801 2928176101 276
150 iso_pu_bacteria 2928536128 2928542935 276
151 iso_pu_bacteria 2981990288 2981996583 276
152 iso_pu_bacteria 3007511990 3007514569 276
153 iso_pu_bacteria 8018845410 8018851135 276
154 iso_pu_bacteria 8019775933 8019782106 276
155 iso_pu_bacteria 8020807995 8020813124 276
156 iso_pu_bacteria 8020945358 8020950820 276
157 iso_pu_bacteria 8021120328 8021126118 276
158 iso_pu_bacteria 8040167225 8040171997 276
159 iso_pu_bacteria 8040173305 8040178538 276
160 3300005338 Ga0068868_100069122 Ga0068868_1000691222 277
161 3300005340 Ga0070689_100138902 Ga0070689_1001389021 277
162 3300005353 Ga0070669_100044329 Ga0070669_1000443294 277
163 3300005355 Ga0070671_100006443 Ga0070671_1000064435 277
164 3300005356 Ga0070674_100039884 Ga0070674_1000398843 277
165 3300005364 Ga0070673_100002419 Ga0070673_1000024195 277
166 3300005456 Ga0070678_100163346 Ga0070678_1001633462 277
167 3300005458 Ga0070681_10012110 Ga0070681_100121106 277
168 3300005459 Ga0068867_100010277 Ga0068867_1000102775 277
169 3300005543 Ga0070672_100000753 Ga0070672_10000075311 277
170 3300005545 Ga0070695_100014997 Ga0070695_1000149976 277
171 3300005578 Ga0068854_100129661 Ga0068854_1001296612 277
172 3300005618 Ga0068864_100023346 Ga0068864_1000233464 277
173 3300005719 Ga0068861_100246168 Ga0068861_1002461682 277
174 3300005834 Ga0068851_10079395 Ga0068851_100793951 277
175 3300006237 Ga0097621_100064471 Ga0097621_1000644713 277
176 3300006358 Ga0068871_100008609 Ga0068871_1000086098 277
177 3300013306 Ga0163162_10194288 Ga0163162_101942882 277
178 3300014969 Ga0157376_10073142 Ga0157376_100731423 277
179 3300017792 Ga0163161_10021439 Ga0163161_100214392 277
180 3300025907 Ga0207645_10031771 Ga0207645_100317711 277
181 3300025908 Ga0207643_10100515 Ga0207643_101005152 277
182 3300025925 Ga0207650_10000485 Ga0207650_1000048520 277
183 3300025926 Ga0207659_10000721 Ga0207659_100007213 277
184 3300025937 Ga0207669_10025761 Ga0207669_100257613 277
185 3300025940 Ga0207691_10002326 Ga0207691_1000232611 277
186 3300025960 Ga0207651_10001387 Ga0207651_100013871 277
187 3300025981 Ga0207640_10117661 Ga0207640_101176612 277
188 3300026089 Ga0207648_10003455 Ga0207648_1000345513 277
189 3300048915 Ga0496112_0049892 Ga0496112_0049892_1063_2139 277
190 iso_pu_bacteria 2512047030 2512350594 277
191 iso_pu_bacteria 2513237082 2513558962 277
192 iso_pu_bacteria 2513237166 2514052242 277
193 iso_pu_bacteria 2515154123 2515690585 277
194 iso_pu_bacteria 2904615490 2904622773 277
195 3300002737 JGI25162J39368_1000053 JGI25162J39368_100005392 278
196 3300002771 JGI25163J39215_1000199 JGI25163J39215_100019917 278
197 3300002772 JGI25164J39214_1000042 JGI25164J39214_100004270 278
198 3300002772 JGI25164J39214_1000080 JGI25164J39214_100008092 278
199 3300002772 JGI25164J39214_1000081 JGI25164J39214_100008178 278
200 3300003214 JGI25165J46597_1000060 JGI25165J46597_100006093 278
201 3300009011 Ga0105251_10040079 Ga0105251_100400793 278
202 3300009036 Ga0105244_10059543 Ga0105244_100595433 278
203 3300013102 Ga0157371_10009074 Ga0157371_100090748 278
204 3300015265 Ga0182005_1026158 Ga0182005_10261581 278
205 3300025207 Ga0209760_100013 Ga0209760_10001370 278
206 3300025231 Ga0207427_100011 Ga0207427_100011459 278
207 3300025233 Ga0209437_100025 Ga0209437_100025111 278
208 3300025261 Ga0209233_1000012 Ga0209233_1000012630 278
209 3300025298 Ga0209050_1001616 Ga0209050_100161611 278
210 3300025303 Ga0209051_1020702 Ga0209051_10207023 278
211 3300025735 Ga0207713_1014245 Ga0207713_10142453 278
212 3300048915 Ga0496112_0077343 Ga0496112_0077343_1983_3023 278
213 3300048920 Ga0496117_0048139 Ga0496117_0048139_1780_2820 278
214 3300048921 Ga0496118_0059154 Ga0496118_0059154_526_1566 278
215 3300048924 Ga0496121_0003246 Ga0496121_0003246_16091_17200 278
216 3300048927 Ga0496124_0018698 Ga0496124_0018698_4615_5724 278
217 3300002741 JGI25157J39369_1001005 JGI25157J39369_100100512 279
218 3300005436 Ga0070713_100001409 Ga0070713_1000014091 279
219 3300006058 Ga0075432_10003242 Ga0075432_100032424 279
220 3300014497 Ga0182008_10028242 Ga0182008_100282422 279
221 3300015261 Ga0182006_1000235 Ga0182006_100023517 279
222 3300015262 Ga0182007_10002233 Ga0182007_100022336 279
223 3300015262 Ga0182007_10007475 Ga0182007_100074754 279
224 3300015265 Ga0182005_1007033 Ga0182005_10070332 279
225 3300025226 Ga0209674_100744 Ga0209674_1007449 279
226 3300025250 Ga0209026_1000175 Ga0209026_100017570 279
227 3300025728 Ga0207655_1001543 Ga0207655_100154319 279
228 3300025928 Ga0207700_10055635 Ga0207700_100556353 279
229 3300027907 Ga0207428_10021683 Ga0207428_100216836 279
230 3300041411 Ga0439466_0011288 Ga0439466_0011288_1504_2544 279
231 3300042009 Ga0439451_000466 Ga0439451_000466_5987_7027 279
232 3300042010 Ga0439452_002179 Ga0439452_002179_5861_6901 279
233 3300046452 Ga0495617_000510 Ga0495617_000510_14037_15140 279
234 3300046457 Ga0495590_0000678 Ga0495590_0000678_1694_2797 279
235 3300046460 Ga0495638_0008752 Ga0495638_0008752_2089_3132 279
236 3300046460 Ga0495638_0039092 Ga0495638_0039092_881_1921 279
237 3300046471 Ga0495650_0002550 Ga0495650_0002550_10743_11783 279
238 3300046471 Ga0495650_0006478 Ga0495650_0006478_4777_5880 279
239 3300046474 Ga0495605_0000985 Ga0495605_0000985_7729_8793 279
240 3300046474 Ga0495605_0013199 Ga0495605_0013199_1527_2567 279
241 3300046474 Ga0495605_0026405 Ga0495605_0026405_1523_2563 279
242 3300046491 Ga0495584_0000370 Ga0495584_0000370_3059_4123 279
243 3300046491 Ga0495584_0018191 Ga0495584_0018191_1242_2282 279
244 3300046492 Ga0495585_0003021 Ga0495585_0003021_5609_6649 279
245 3300046499 Ga0495594_0025763 Ga0495594_0025763_1386_2429 279
246 3300046501 Ga0495607_0000630 Ga0495607_0000630_26642_27745 279
247 3300046501 Ga0495607_0001153 Ga0495607_0001153_15501_16604 279
248 3300046501 Ga0495607_0001288 Ga0495607_0001288_11621_12724 279
249 3300046506 Ga0495583_0002503 Ga0495583_0002503_11687_12727 279
250 3300046506 Ga0495583_0021355 Ga0495583_0021355_1553_2617 279
251 3300046512 Ga0495610_0097844 Ga0495610_0097844_197_1237 279
252 3300046513 Ga0495616_0001156 Ga0495616_0001156_12725_13828 279
253 3300046513 Ga0495616_0025386 Ga0495616_0025386_748_1788 279
254 3300046518 Ga0495631_0030203 Ga0495631_0030203_185_1225 279
255 3300046518 Ga0495631_0097374 Ga0495631_0097374_87_1190 279
256 3300046519 Ga0495632_0001346 Ga0495632_0001346_16278_17318 279
257 3300046519 Ga0495632_0001872 Ga0495632_0001872_101_1165 279
258 3300046520 Ga0495637_0000721 Ga0495637_0000721_17183_18223 279
259 3300046520 Ga0495637_0002626 Ga0495637_0002626_3333_4421 279
260 3300046522 Ga0495643_0003703 Ga0495643_0003703_539_1627 279
261 3300046522 Ga0495643_0010071 Ga0495643_0010071_4264_5304 279
262 3300046522 Ga0495643_0030151 Ga0495643_0030151_942_2045 279
263 3300046524 Ga0495648_0022732 Ga0495648_0022732_806_1894 279
264 3300046528 Ga0495642_0003258 Ga0495642_0003258_3575_4639 279
265 3300046530 Ga0495654_0001937 Ga0495654_0001937_2926_3990 279
266 3300046530 Ga0495654_0002115 Ga0495654_0002115_5766_6830 279
267 3300046530 Ga0495654_0106799 Ga0495654_0106799_69_1109 279
268 3300046538 Ga0495609_0005130 Ga0495609_0005130_2337_3377 279
269 3300046538 Ga0495609_0026066 Ga0495609_0026066_512_1576 279
270 3300046542 Ga0495597_0004005 Ga0495597_0004005_3645_4733 279
271 3300046542 Ga0495597_0102120 Ga0495597_0102120_21_1061 279
272 3300046557 Ga0495622_0001156 Ga0495622_0001156_7631_8674 279
273 3300046648 Ga0495611_0003201 Ga0495611_0003201_4039_5142 279
274 3300046660 Ga0495625_0008965 Ga0495625_0008965_874_1938 279
275 3300046664 Ga0495659_0000504 Ga0495659_0000504_5903_6967 279
276 3300046664 Ga0495659_0001143 Ga0495659_0001143_6257_7360 279
277 3300046665 Ga0495661_0001108 Ga0495661_0001108_7064_8167 279
278 3300046684 Ga0495669_0041127 Ga0495669_0041127_826_1866 279
279 3300046691 Ga0495670_0000256 Ga0495670_0000256_15505_16608 279
280 3300046691 Ga0495670_0001331 Ga0495670_0001331_9225_10268 279
281 3300046691 Ga0495670_0048855 Ga0495670_0048855_11_1054 279
282 3300046692 Ga0495671_0016064 Ga0495671_0016064_656_1696 279
283 3300046694 Ga0495649_0000164 Ga0495649_0000164_29595_30659 279
284 3300046694 Ga0495649_0000820 Ga0495649_0000820_7601_8665 279
285 3300046794 Ga0495589_0000388 Ga0495589_0000388_9385_10473 279
286 3300046794 Ga0495589_0043549 Ga0495589_0043549_655_1719 279
287 3300046810 Ga0495660_0024914 Ga0495660_0024914_1579_2643 279
288 3300047318 Ga0495636_0000119 Ga0495636_0000119_24532_25635 279
289 3300047320 Ga0495672_0006086 Ga0495672_0006086_2594_3658 279
290 3300047320 Ga0495672_0033385 Ga0495672_0033385_512_1615 279
291 3300047323 Ga0495683_0003421 Ga0495683_0003421_5649_6752 279
292 3300047323 Ga0495683_0054591 Ga0495683_0054591_412_1476 279
293 3300047443 Ga0495687_000802 Ga0495687_000802_7108_8172 279
294 3300047443 Ga0495687_001275 Ga0495687_001275_6474_7538 279
295 3300047447 Ga0495685_014116 Ga0495685_014116_707_1771 279
296 3300047469 Ga0495673_0000908 Ga0495673_0000908_21535_22638 279
297 3300047469 Ga0495673_0014726 Ga0495673_0014726_782_1822 279
298 3300047673 Ga0495593_0004221 Ga0495593_0004221_215_1279 279
299 3300048091 Ga0495626_0000665 Ga0495626_0000665_27086_28150 279
300 3300048091 Ga0495626_0000842 Ga0495626_0000842_7476_8540 279
301 3300048908 Ga0496105_0190463 Ga0496105_0190463_448_1512 279
302 3300048919 Ga0496116_0000730 Ga0496116_0000730_5873_6937 279
303 3300048921 Ga0496118_0066920 Ga0496118_0066920_125_1189 279
304 3300048925 Ga0496122_0004049 Ga0496122_0004049_7357_8421 279
305 3300048926 Ga0496123_0029484 Ga0496123_0029484_2701_3765 279
306 3300048927 Ga0496124_0104050 Ga0496124_0104050_203_1267 279
307 3300049459 Ga0495678_000610 Ga0495678_000610_5087_6151 279
308 3300049459 Ga0495678_001623 Ga0495678_001623_5847_6911 279
309 3300049459 Ga0495678_073814 Ga0495678_073814_55_1095 279
310 3300049460 Ga0495682_0033144 Ga0495682_0033144_103_1167 279
311 3300049460 Ga0495682_0052953 Ga0495682_0052953_213_1256 279
312 iso_pu_bacteria 2895395659 2895397572 279
313 2124908027 MRS2a_Contig_56 MRS2a_00433870 280
314 3300006177 Ga0075362_10051817 Ga0075362_100518171 280
315 3300006186 Ga0075369_10015439 Ga0075369_100154393 280
316 3300009036 Ga0105244_10033371 Ga0105244_100333713 280
317 3300013104 Ga0157370_10179015 Ga0157370_101790152 280
318 3300013308 Ga0157375_10084224 Ga0157375_100842242 280
319 3300013308 Ga0157375_10285003 Ga0157375_102850032 280
320 3300017792 Ga0163161_10418302 Ga0163161_104183021 280
321 3300025728 Ga0207655_1002960 Ga0207655_10029604 280
322 3300025735 Ga0207713_1004239 Ga0207713_10042396 280
323 3300046452 Ga0495617_000146 Ga0495617_000146_10819_11859 280
324 3300046452 Ga0495617_001347 Ga0495617_001347_7911_8951 280
325 3300046457 Ga0495590_0012346 Ga0495590_0012346_137_1177 280
326 3300046458 Ga0495591_007275 Ga0495591_007275_683_1723 280
327 3300046463 Ga0495653_0229958 Ga0495653_0229958_50_1090 280
328 3300046473 Ga0495582_0009290 Ga0495582_0009290_1732_2772 280
329 3300046475 Ga0495639_0006694 Ga0495639_0006694_1834_2874 280
330 3300046492 Ga0495585_0004557 Ga0495585_0004557_3277_4317 280
331 3300046499 Ga0495594_0021296 Ga0495594_0021296_2187_3227 280
332 3300046499 Ga0495594_0038881 Ga0495594_0038881_178_1218 280
333 3300046516 Ga0495628_0020935 Ga0495628_0020935_2601_3641 280
334 3300046524 Ga0495648_0036744 Ga0495648_0036744_1355_2395 280
335 3300046526 Ga0495666_0016231 Ga0495666_0016231_1327_2415 280
336 3300046526 Ga0495666_0046457 Ga0495666_0046457_820_1860 280
337 3300046528 Ga0495642_0000250 Ga0495642_0000250_17556_18596 280
338 3300046535 Ga0495586_0014731 Ga0495586_0014731_2585_3625 280
339 3300046557 Ga0495622_0081432 Ga0495622_0081432_162_1202 280
340 3300046648 Ga0495611_0034799 Ga0495611_0034799_852_1892 280
341 3300046663 Ga0495635_0036110 Ga0495635_0036110_963_2003 280
342 3300046664 Ga0495659_0012946 Ga0495659_0012946_758_1798 280
343 3300046680 Ga0495646_0001267 Ga0495646_0001267_8973_10013 280
344 3300046689 Ga0495613_0033897 Ga0495613_0033897_2342_3382 280
345 3300046692 Ga0495671_0000094 Ga0495671_0000094_58922_59962 280
346 3300046810 Ga0495660_0006459 Ga0495660_0006459_754_1794 280
347 3300046810 Ga0495660_0060006 Ga0495660_0060006_478_1518 280
348 3300047315 Ga0495581_0024819 Ga0495581_0024819_1520_2560 280
349 3300047320 Ga0495672_0011393 Ga0495672_0011393_241_1281 280
350 3300047322 Ga0495680_0004958 Ga0495680_0004958_2542_3582 280
351 3300047469 Ga0495673_0024613 Ga0495673_0024613_840_1880 280
352 3300047673 Ga0495593_0125827 Ga0495593_0125827_164_1204 280
353 3300048914 Ga0496111_0005004 Ga0496111_0005004_4312_5352 280
354 3300048928 Ga0496125_0165121 Ga0496125_0165121_83_1123 280
355 3300049460 Ga0495682_0035290 Ga0495682_0035290_297_1337 280
356 3300050489 nmdc:mga03683_38021_c1 nmdc:mga03683_38021_c1_314_1354 280
357 3300050516 nmdc:mga0sz30_6362_c1 nmdc:mga0sz30_6362_c1_627_1667 280
358 iso_pu_bacteria 2884411467 2884414987 280

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00892

EamA

EamA-like transporter family

152

285

0.97

PF00892

EamA

EamA-like transporter family

3

144

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
7b0k-assembly1.cif.gz_A membrane protein structure 0.8068 5 274
7paf-assembly1.cif.gz_D streptococcus pneumoniae choline importer licb in lipid nanodiscs 0.803 5 274
5y79-assembly1.cif.gz_B crystal structure of the triose-phosphate/phosphate translocator in complex with 3-phosphoglycerate 0.7878 3 274
7paf-assembly1.cif.gz_D streptococcus pneumoniae choline importer licb in lipid nanodiscs 0.7773 5 274
7b0k-assembly1.cif.gz_A membrane protein structure 0.7764 5 274
ID Description Score Start End Superfamily
af_A0A0P0WMA8_96_409_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.7977 5 274 1.20.1740.10
af_A0A0P0WMA8_96_409_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.7697 5 274 1.20.1740.10
af_Q8RY83_36_351_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.7656 4 274 1.20.1740.10
af_Q8RY83_36_351_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.7412 4 274 1.20.1740.10
af_A0A0P0YAS8_28_439_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.7342 2 274 1.20.1740.10
ID Description Score Start End GO Terms
AF-A0A3M4QG39-F1-model_v4 EamA domain-containing protein 0.9887 1 274 GO:0016020
AF-A0A011N3E8-F1-model_v4 Putative permease, DMT superfamily 0.9842 1 275 GO:0005886
AF-A0A2R7T4I4-F1-model_v4 deleted 0.969 1 274
AF-A0A1F4MGS5-F1-model_v4 EamA domain-containing protein 0.9667 3 275 GO:0005886
AF-A0A3M4QG39-F1-model_v4 EamA domain-containing protein 0.9643 1 274 GO:0016020

Feature Viewer

pLDDT pTM Quality
91.06 0.89 High
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Predicted Structure (AlphaFold2)

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