F420115

General Info

Members Datasets Scaffolds Average Seq Length
355 152 710 368

Family's Representative Sequence

Representative Sequence 3300009177|Ga0105248_10021977|Ga0105248_100219772
Length 386
Sequence MLTKLEVQLRKVRTRTRVQNRVGEIRKSRGVGAADLARRVGVSRQTIYAIELGTYVPNTEVALNLAKELEVTVDELFLLQDGPQKAAESLAAEVLSSGPSVKGQPVRVCQIGSRWISVPVSASPYYMPEADGIIKRTGKTNGRADLVVFAKEEAAQKRLVLAGCDPATGLLARMVERISGVEIVSAAASSKLALTWLSEGKVHVAGSHLEDPKTGEFNLPYLRKQFPSEDFSVVTFARWEEGFVVATGNPKRIRKIEDLARKNVRFANREPGSGSRGLLDTLLDKAGMDGEKVQGYDRIAHGHLAAAYCVVSREADVCLATRSAAQTFGLDFVPLHSERYDLVMRKRTADLPAVKAFLDVLQRATLRRKLEVLAGYDTSQTGTVLA

Samples

Sample ID Description Type Environment
1 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
19 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
47 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
52 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
55 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
56 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
57 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
58 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
59 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
60 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
61 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
62 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
63 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
64 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
65 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
66 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
67 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
68 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
69 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
70 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
71 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
72 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
73 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
74 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
113 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
114 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
115 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
116 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
117 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
118 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
119 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
120 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
121 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
122 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
123 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
124 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
125 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
126 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
127 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
128 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
129 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
130 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
131 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
132 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
133 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
134 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
135 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
136 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
137 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
138 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
139 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
140 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
141 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
142 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
143 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
144 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
145 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
146 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
147 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
148 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
149 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
150 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
151 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
152 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.28
Nodule 0
Rhizoplane 0.28
Rhizosphere 98.59
Stem 0
Stem Tuber 0
Unclassified 20.28

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105248_10021977 3300009177 Bacteria 7070
2 Ga0065712_10086949 3300005290 Bacteria 2607
3 Ga0065715_10136534 3300005293 Bacteria 1920
4 Ga0070658_10008925 3300005327 Bacteria 8056
5 Ga0070683_100004575 3300005329 Bacteria 11416
6 Ga0070683_100016342 3300005329 Bacteria 6544
7 Ga0070683_100021550 3300005329 Bacteria 5752
8 Ga0070683_100050879 3300005329 Bacteria 3837
9 Ga0070683_100050881 3300005329 Unclassified 3837
10 Ga0070666_10083799 3300005335 Unclassified 2181
11 Ga0070680_100100385 3300005336 Bacteria 2402
12 Ga0070680_100104604 3300005336 Unclassified 2353
13 Ga0070682_100229582 3300005337 Bacteria 1326
14 Ga0068868_100009282 3300005338 Bacteria 7071
15 Ga0068868_100024482 3300005338 Bacteria 4581
16 Ga0070689_100038941 3300005340 Bacteria 3638
17 Ga0070689_100199162 3300005340 Bacteria 1634
18 Ga0070691_10005311 3300005341 Bacteria 5855
19 Ga0070675_100000561 3300005354 Bacteria 25582
20 Ga0070675_100063156 3300005354 Unclassified 3061
21 Ga0070675_100339947 3300005354 Bacteria 1329
22 Ga0070671_100002799 3300005355 Bacteria 13553
23 Ga0070671_100120636 3300005355 Unclassified 2206
24 Ga0070673_100012600 3300005364 Bacteria 5811
25 Ga0070673_100012718 3300005364 Bacteria 5789
26 Ga0070673_100148360 3300005364 Unclassified 1984
27 Ga0070688_100011102 3300005365 Bacteria 5000
28 Ga0070659_100027361 3300005366 Bacteria 4393
29 Ga0070667_100056918 3300005367 Unclassified 3303
30 Ga0070710_10146883 3300005437 Unclassified 1451
31 Ga0070662_100019546 3300005457 Bacteria 4599
32 Ga0070681_10001224 3300005458 Bacteria 22324
33 Ga0070681_10166672 3300005458 Unclassified 2126
34 Ga0068867_100021806 3300005459 Bacteria 4573
35 Ga0070685_10010129 3300005466 Unclassified 4892
36 Ga0070679_100138222 3300005530 Bacteria 2417
37 Ga0070679_100219556 3300005530 Unclassified 1862
38 Ga0070684_100005373 3300005535 Bacteria 9814
39 Ga0070684_100005568 3300005535 Bacteria 9669
40 Ga0068853_100022062 3300005539 Bacteria 5313
41 Ga0068853_100053020 3300005539 Bacteria 3493
42 Ga0068853_100073194 3300005539 Unclassified 2987
43 Ga0070672_100051165 3300005543 Unclassified 3220
44 Ga0070672_100116391 3300005543 Bacteria 2184
45 Ga0070686_100039326 3300005544 Bacteria 2947
46 Ga0070693_100097200 3300005547 Unclassified 1787
47 Ga0070693_100129042 3300005547 Bacteria 1578
48 Ga0070665_100021809 3300005548 Bacteria 6440
49 Ga0070665_100026617 3300005548 Bacteria 5823
50 Ga0070665_100125151 3300005548 Bacteria 2573
51 Ga0070704_100326181 3300005549 Unclassified 1288
52 Ga0068855_100005544 3300005563 Bacteria 15404
53 Ga0068855_100008695 3300005563 Bacteria 12275
54 Ga0068855_100027685 3300005563 Bacteria 6781
55 Ga0068855_100094075 3300005563 Unclassified 3456
56 Ga0068855_100110767 3300005563 Bacteria 3151
57 Ga0070664_100009177 3300005564 Bacteria 8030
58 Ga0070664_100046707 3300005564 Bacteria 3658
59 Ga0070664_100273926 3300005564 Bacteria 1521
60 Ga0068857_100002833 3300005577 Bacteria 14260
61 Ga0068857_100004445 3300005577 Bacteria 11861
62 Ga0068857_100022145 3300005577 Bacteria 5591
63 Ga0068856_100007942 3300005614 Bacteria 10360
64 Ga0068856_100106414 3300005614 Unclassified 2799
65 Ga0068856_100201551 3300005614 Bacteria 2004
66 Ga0068856_100258980 3300005614 Bacteria 1755
67 Ga0068859_100007241 3300005617 Bacteria 11254
68 Ga0068859_100022521 3300005617 Bacteria 6318
69 Ga0068864_100127284 3300005618 Bacteria 2284
70 Ga0068863_100003585 3300005841 Bacteria 15320
71 Ga0068863_100018150 3300005841 Bacteria 6736
72 Ga0068863_100052505 3300005841 Bacteria 3863
73 Ga0068863_100313075 3300005841 Bacteria 1524
74 Ga0068858_100000622 3300005842 Bacteria 36875
75 Ga0068858_100004193 3300005842 Bacteria 14192
76 Ga0068858_100007290 3300005842 Bacteria 10716
77 Ga0068858_100038081 3300005842 Bacteria 4460
78 Ga0068858_100338729 3300005842 Bacteria 1439
79 Ga0068860_100012782 3300005843 Bacteria 8254
80 Ga0068862_100179315 3300005844 Bacteria 1900
81 Ga0081539_10016150 3300005985 Bacteria 5359
82 Ga0097621_100002683 3300006237 Bacteria 12178
83 Ga0097621_100021006 3300006237 Bacteria 5040
84 Ga0068871_100003868 3300006358 Bacteria 10324
85 Ga0068871_100013181 3300006358 Bacteria 6131
86 Ga0068871_100014134 3300006358 Bacteria 5940
87 Ga0068871_100017266 3300006358 Bacteria 5456
88 Ga0075428_100164504 3300006844 Unclassified 2407
89 Ga0075431_100011116 3300006847 Bacteria 9060
90 Ga0075431_100072201 3300006847 Unclassified 3561
91 Ga0075433_10149229 3300006852 Bacteria 2079
92 Ga0075429_100018702 3300006880 Bacteria 5998
93 Ga0097620_100007241 3300006931 Bacteria 11254
94 Ga0097620_100022521 3300006931 Bacteria 6318
95 Ga0105240_10000947 3300009093 Bacteria 51658
96 Ga0105240_10001367 3300009093 Bacteria 41914
97 Ga0105240_10027553 3300009093 Bacteria 7437
98 Ga0105240_10043005 3300009093 Bacteria 5753
99 Ga0105240_10114891 3300009093 Bacteria 3251
100 Ga0105240_10146069 3300009093 Unclassified 2822
101 Ga0105240_10147333 3300009093 Bacteria 2807
102 Ga0111539_10008713 3300009094 Bacteria 12870
103 Ga0111539_10099594 3300009094 Unclassified 3413
104 Ga0111539_10463061 3300009094 Bacteria 1476
105 Ga0105245_10007301 3300009098 Bacteria 9678
106 Ga0105245_10008044 3300009098 Bacteria 9222
107 Ga0105245_10015649 3300009098 Bacteria 6616
108 Ga0105245_10086127 3300009098 Bacteria 2881
109 Ga0105245_10101756 3300009098 Bacteria 2660
110 Ga0105245_10229160 3300009098 Unclassified 1796
111 Ga0105245_10368984 3300009098 Viruses 1427
112 Ga0105247_10102341 3300009101 Unclassified 1833
113 Ga0114129_10016656 3300009147 Bacteria 10467
114 Ga0114129_10019999 3300009147 Bacteria 9528
115 Ga0114129_10054814 3300009147 Bacteria 5589
116 Ga0114129_10066604 3300009147 Bacteria 5023
117 Ga0114129_10370213 3300009147 Bacteria 1894
118 Ga0105243_10009604 3300009148 Bacteria 7366
119 Ga0105241_10009187 3300009174 Bacteria 7275
120 Ga0105241_10017502 3300009174 Bacteria 5269
121 Ga0105241_10033336 3300009174 Bacteria 3866
122 Ga0105241_10055603 3300009174 Bacteria 3032
123 Ga0105241_10077853 3300009174 Bacteria 2590
124 Ga0105241_10226548 3300009174 Bacteria 1574
125 Ga0105242_10006677 3300009176 Bacteria 8904
126 Ga0105242_10007759 3300009176 Bacteria 8256
127 Ga0105242_10049754 3300009176 Bacteria 3411
128 Ga0105242_10093513 3300009176 Bacteria 2535
129 Ga0105248_10002006 3300009177 Bacteria 22610
130 Ga0105248_10002208 3300009177 Bacteria 21567
131 Ga0105248_10064560 3300009177 Unclassified 4110
132 Ga0105248_10080295 3300009177 Unclassified 3666
133 Ga0105248_10184128 3300009177 Bacteria 2354
134 Ga0105248_10292691 3300009177 Unclassified 1833
135 Ga0105237_10022927 3300009545 Bacteria 6402
136 Ga0105237_10025755 3300009545 Bacteria 6014
137 Ga0105237_10111153 3300009545 Bacteria 2732
138 Ga0105238_10001452 3300009551 Bacteria 23791
139 Ga0105238_10004254 3300009551 Bacteria 14226
140 Ga0105238_10006572 3300009551 Bacteria 11581
141 Ga0105238_10011130 3300009551 Bacteria 9046
142 Ga0105238_10016454 3300009551 Bacteria 7487
143 Ga0105238_10022596 3300009551 Bacteria 6410
144 Ga0105238_10022819 3300009551 Bacteria 6378
145 Ga0105238_10228412 3300009551 Bacteria 1838
146 Ga0105249_10011263 3300009553 Bacteria 7851
147 Ga0105249_10043685 3300009553 Bacteria 4076
148 Ga0105239_10007778 3300010375 Bacteria 12266
149 Ga0105239_10018056 3300010375 Bacteria 7803
150 Ga0105239_10027486 3300010375 Bacteria 6262
151 Ga0105239_10059224 3300010375 Bacteria 4203
152 Ga0105246_10004013 3300011119 Bacteria 8936
153 Ga0157370_10002206 3300013104 Bacteria 23774
154 Ga0157370_10059185 3300013104 Bacteria 3641
155 Ga0157370_10076982 3300013104 Unclassified 3143
156 Ga0157370_10207052 3300013104 Bacteria 1819
157 Ga0157369_10004461 3300013105 Bacteria 16492
158 Ga0157369_10006447 3300013105 Bacteria 13603
159 Ga0157369_10014855 3300013105 Bacteria 8788
160 Ga0157369_10091839 3300013105 Unclassified 3240
161 Ga0157369_10120647 3300013105 Bacteria 2782
162 Ga0157369_10177725 3300013105 Unclassified 2240
163 Ga0157374_10010186 3300013296 Bacteria 8083
164 Ga0157374_10134447 3300013296 Unclassified 2396
165 Ga0157378_10013071 3300013297 Bacteria 7263
166 Ga0157378_10014692 3300013297 Bacteria 6859
167 Ga0157378_10025894 3300013297 Bacteria 5168
168 Ga0157378_10369474 3300013297 Unclassified 1406
169 Ga0163162_10012765 3300013306 Bacteria 8206
170 Ga0163162_10016854 3300013306 Bacteria 7142
171 Ga0163162_10040819 3300013306 Bacteria 4641
172 Ga0163162_10138528 3300013306 Bacteria 2545
173 Ga0163162_10171979 3300013306 Bacteria 2291
174 Ga0163162_10180931 3300013306 Bacteria 2234
175 Ga0157372_10006349 3300013307 Bacteria 12575
176 Ga0157372_10025123 3300013307 Bacteria 6474
177 Ga0157372_10136690 3300013307 Bacteria 2823
178 Ga0157372_10152113 3300013307 Bacteria 2671
179 Ga0157372_10178026 3300013307 Bacteria 2461
180 Ga0157372_10313091 3300013307 Bacteria 1827
181 Ga0157375_10001702 3300013308 Bacteria 18879
182 Ga0157375_10002517 3300013308 Bacteria 15906
183 Ga0157375_10009199 3300013308 Bacteria 8661
184 Ga0157375_10200780 3300013308 Bacteria 2150
185 Ga0163163_10020878 3300014325 Bacteria 6175
186 Ga0163163_10025277 3300014325 Bacteria 5662
187 Ga0163163_10061527 3300014325 Bacteria 3720
188 Ga0163163_10061732 3300014325 Bacteria 3713
189 Ga0163163_10090271 3300014325 Bacteria 3077
190 Ga0163163_10147821 3300014325 Unclassified 2394
191 Ga0163163_10177883 3300014325 Bacteria 2174
192 Ga0163163_10235017 3300014325 Bacteria 1882
193 Ga0157380_10242603 3300014326 Bacteria 1625
194 Ga0157380_10245262 3300014326 Bacteria 1618
195 Ga0157379_10000180 3300014968 Bacteria 47884
196 Ga0157376_10025293 3300014969 Bacteria 4674
197 Ga0157376_10118897 3300014969 Bacteria 2339
198 Ga0157376_10253527 3300014969 Bacteria 1645
199 Ga0213875_10020558 3300021388 Bacteria 3167
200 Ga0207654_10004334 3300025911 Bacteria 7150
201 Ga0207654_10012277 3300025911 Unclassified 4386
202 Ga0207654_10033797 3300025911 Bacteria 2837
203 Ga0207707_10003944 3300025912 Bacteria 13180
204 Ga0207707_10101958 3300025912 Unclassified 2509
205 Ga0207695_10002729 3300025913 Bacteria 25762
206 Ga0207695_10003979 3300025913 Bacteria 20396
207 Ga0207695_10004859 3300025913 Bacteria 18141
208 Ga0207695_10005342 3300025913 Bacteria 17091
209 Ga0207671_10041727 3300025914 Bacteria 3396
210 Ga0207671_10064214 3300025914 Bacteria 2729
211 Ga0207660_10313091 3300025917 Bacteria 1252
212 Ga0207662_10042520 3300025918 Bacteria 2678
213 Ga0207657_10015413 3300025919 Bacteria 7404
214 Ga0207652_10127764 3300025921 Unclassified 2265
215 Ga0207694_10002109 3300025924 Bacteria 16406
216 Ga0207694_10008285 3300025924 Bacteria 7858
217 Ga0207694_10020074 3300025924 Bacteria 5054
218 Ga0207694_10147034 3300025924 Bacteria 1897
219 Ga0207694_10189879 3300025924 Bacteria 1668
220 Ga0207694_10242443 3300025924 Bacteria 1473
221 Ga0207650_10113131 3300025925 Bacteria 2104
222 Ga0207659_10001525 3300025926 Bacteria 13752
223 Ga0207659_10009742 3300025926 Bacteria 6008
224 Ga0207659_10273887 3300025926 Bacteria 1378
225 Ga0207687_10004453 3300025927 Bacteria 9342
226 Ga0207687_10014157 3300025927 Bacteria 5218
227 Ga0207687_10032016 3300025927 Unclassified 3558
228 Ga0207687_10050670 3300025927 Bacteria 2890
229 Ga0207700_10135209 3300025928 Bacteria 2018
230 Ga0207644_10097132 3300025931 Unclassified 2206
231 Ga0207686_10022259 3300025934 Bacteria 3649
232 Ga0207686_10023268 3300025934 Unclassified 3576
233 Ga0207686_10096505 3300025934 Bacteria 1964
234 Ga0207686_10222941 3300025934 Bacteria 1362
235 Ga0207670_10165140 3300025936 Bacteria 1656
236 Ga0207669_10073382 3300025937 Bacteria 2159
237 Ga0207704_10246932 3300025938 Bacteria 1337
238 Ga0207691_10049475 3300025940 Unclassified 3851
239 Ga0207691_10111974 3300025940 Bacteria 2426
240 Ga0207711_10002005 3300025941 Bacteria 18409
241 Ga0207711_10036167 3300025941 Unclassified 4189
242 Ga0207711_10038418 3300025941 Bacteria 4071
243 Ga0207711_10054130 3300025941 Unclassified 3442
244 Ga0207711_10374343 3300025941 Unclassified 1321
245 Ga0207689_10315437 3300025942 Unclassified 1297
246 Ga0207661_10010314 3300025944 Bacteria 6721
247 Ga0207661_10044322 3300025944 Unclassified 3515
248 Ga0207679_10037430 3300025945 Unclassified 3449
249 Ga0207667_10002914 3300025949 Bacteria 21244
250 Ga0207667_10032259 3300025949 Bacteria 5646
251 Ga0207667_10198628 3300025949 Unclassified 2058
252 Ga0207667_10205213 3300025949 Bacteria 2021
253 Ga0207651_10005010 3300025960 Bacteria 6753
254 Ga0207651_10006103 3300025960 Bacteria 6263
255 Ga0207651_10035332 3300025960 Bacteria 3248
256 Ga0207651_10116900 3300025960 Unclassified 2014
257 Ga0207712_10010307 3300025961 Bacteria 5932
258 Ga0207658_10006183 3300025986 Bacteria 8175
259 Ga0207677_10001199 3300026023 Bacteria 14057
260 Ga0207677_10015029 3300026023 Bacteria 4539
261 Ga0207703_10010781 3300026035 Bacteria 7130
262 Ga0207703_10065343 3300026035 Bacteria 2989
263 Ga0207703_10298955 3300026035 Unclassified 1467
264 Ga0207639_10157605 3300026041 Bacteria 1909
265 Ga0207708_10082183 3300026075 Bacteria 2476
266 Ga0207702_10205866 3300026078 Bacteria 1827
267 Ga0207702_10222673 3300026078 Bacteria 1758
268 Ga0207641_10000841 3300026088 Bacteria 32663
269 Ga0207641_10040207 3300026088 Bacteria 3914
270 Ga0207641_10125543 3300026088 Bacteria 2297
271 Ga0207641_10186016 3300026088 Bacteria 1906
272 Ga0207648_10016733 3300026089 Bacteria 6691
273 Ga0207648_10134228 3300026089 Unclassified 2179
274 Ga0207674_10001681 3300026116 Bacteria 28436
275 Ga0207674_10001855 3300026116 Bacteria 26925
276 Ga0207674_10004944 3300026116 Bacteria 15915
277 Ga0207674_10066520 3300026116 Bacteria 3630
278 Ga0207674_10266791 3300026116 Unclassified 1659
279 Ga0207683_10315573 3300026121 Unclassified 1431
280 Ga0268266_10008666 3300028379 Bacteria 9026
281 Ga0268264_10006872 3300028381 Bacteria 9551
282 Ga0265316_10017517 3300031344 Bacteria 6187
283 Ga0265313_10001600 3300031595 Bacteria 21015
284 Ga0265314_10000216 3300031711 Bacteria 85672
285 Ga0265314_10024983 3300031711 Bacteria 4516
286 Ga0373934_0007397 3300035086 Bacteria 4077
287 Ga0373934_0009064 3300035086 Bacteria 3722
288 Ga0373953_0088516 3300035117 Unclassified 1293
289 Ga0373954_0000896 3300035118 Bacteria 11584
290 Ga0373954_0017895 3300035118 Unclassified 3186
291 Ga0373955_0024423 3300035172 Unclassified 3092
292 Ga0373927_0001768 3300035695 Bacteria 16129
293 Ga0373937_0001934 3300036401 Bacteria 17332
294 Ga0373937_0026407 3300036401 Bacteria 5248
295 Ga0373937_0409960 3300036401 Bacteria 1286
296 Ga0373925_0079108 3300037068 Bacteria 2497
297 Ga0373925_0419763 3300037068 Bacteria 1093
298 Ga0436364_0398836 3300037853 Bacteria 7012
299 Ga0436364_0609295 3300037853 Bacteria 4681
300 Ga0495592_0066296 3300046454 Bacteria 2642
301 Ga0495651_0002760 3300046462 Bacteria 13622
302 Ga0495651_0024346 3300046462 Bacteria 4711
303 Ga0495651_0155773 3300046462 Unclassified 1642
304 Ga0495580_0007917 3300046472 Bacteria 8499
305 Ga0495580_0028693 3300046472 Bacteria 4045
306 Ga0495580_0162742 3300046472 Unclassified 1544
307 Ga0495582_0058204 3300046473 Bacteria 2131
308 Ga0495664_0053541 3300046477 Bacteria 2400
309 Ga0495608_0144130 3300046511 Unclassified 1520
310 Ga0495630_0016148 3300046517 Bacteria 5457
311 Ga0495665_0024543 3300046531 Bacteria 3239
312 Ga0495587_0007009 3300046536 Bacteria 7319
313 Ga0495645_0116196 3300046543 Bacteria 1889
314 Ga0495645_0125696 3300046543 Bacteria 1802
315 Ga0495645_0132862 3300046543 Unclassified 1742
316 Ga0495667_0008130 3300046559 Bacteria 7118
317 Ga0495667_0012348 3300046559 Bacteria 5789
318 Ga0495634_0020058 3300046642 Bacteria 4743
319 Ga0495599_0015745 3300046678 Bacteria 4694
320 Ga0495613_0059492 3300046689 Bacteria 2801
321 Ga0495581_0221752 3300047315 Unclassified 1106
322 Ga0495604_0052080 3300047317 Bacteria 3171
323 Ga0495604_0057037 3300047317 Bacteria 3004
324 Ga0495636_0015611 3300047318 Bacteria 3027
325 Ga0495636_0035705 3300047318 Unclassified 2048
326 Ga0495674_0007240 3300047319 Bacteria 10618
327 Ga0495674_0020428 3300047319 Bacteria 6131
328 Ga0495674_0100974 3300047319 Bacteria 2455
329 Ga0495674_0113950 3300047319 Unclassified 2290
330 Ga0495675_0017380 3300047444 Bacteria 4558
331 Ga0495684_0003881 3300047471 Bacteria 11651
332 Ga0495684_0005574 3300047471 Bacteria 9805
333 Ga0495684_0023239 3300047471 Unclassified 4766
334 Ga0495684_0062262 3300047471 Bacteria 2838
335 Ga0495684_0065838 3300047471 Unclassified 2755
336 Ga0495684_0117170 3300047471 Bacteria 2008
337 Ga0495602_0004954 3300048088 Bacteria 13954
338 Ga0495602_0079525 3300048088 Bacteria 2765
339 Ga0495602_0291037 3300048088 Bacteria 1199
340 Ga0496112_0172373 3300048915 Bacteria 2129
341 nmdc:mga05p37_105750_c1 3300050507 Unclassified 3462
342 nmdc:mga05p37_222398_c1 3300050507 Unclassified 2278
343 nmdc:mga05p37_223294_c1 3300050507 Bacteria 2273
344 nmdc:mga05p37_24196_c1 3300050507 Bacteria 7379
345 nmdc:mga09592_122255_c1 3300050508 Unclassified 2236
346 nmdc:mga06r32_34822_c1 3300050510 Unclassified 4750
347 nmdc:mga08y16_302449_c1 3300050511 Bacteria 1649
348 nmdc:mga08y16_491746_c1 3300050511 Unclassified 1247
349 nmdc:mga0n895_225301_c1 3300050512 Bacteria 1903
350 nmdc:mga0rr50_178251_c1 3300050513 Unclassified 1736
351 nmdc:mga0rr50_199313_c1 3300050513 Unclassified 1644
352 nmdc:mga0rr50_60844_c1 3300050513 Bacteria 1450
353 nmdc:mga0rr50_64254_c1 3300050513 Unclassified 2775
354 nmdc:mga0a205_13586_c2 3300050515 Unclassified 2787
355 Ga0500568_0004343 3300053139 Bacteria 7601
356 Ga0105248_10021977
357 Ga0065712_10086949
358 Ga0065715_10136534
359 Ga0070658_10008925
360 Ga0070683_100004575
361 Ga0070683_100016342
362 Ga0070683_100021550
363 Ga0070683_100050879
364 Ga0070683_100050881
365 Ga0070666_10083799
366 Ga0070680_100100385
367 Ga0070680_100104604
368 Ga0070682_100229582
369 Ga0068868_100009282
370 Ga0068868_100024482
371 Ga0070689_100038941
372 Ga0070689_100199162
373 Ga0070691_10005311
374 Ga0070675_100000561
375 Ga0070675_100063156
376 Ga0070675_100339947
377 Ga0070671_100002799
378 Ga0070671_100120636
379 Ga0070673_100012600
380 Ga0070673_100012718
381 Ga0070673_100148360
382 Ga0070688_100011102
383 Ga0070659_100027361
384 Ga0070667_100056918
385 Ga0070710_10146883
386 Ga0070662_100019546
387 Ga0070681_10001224
388 Ga0070681_10166672
389 Ga0068867_100021806
390 Ga0070685_10010129
391 Ga0070679_100138222
392 Ga0070679_100219556
393 Ga0070684_100005373
394 Ga0070684_100005568
395 Ga0068853_100022062
396 Ga0068853_100053020
397 Ga0068853_100073194
398 Ga0070672_100051165
399 Ga0070672_100116391
400 Ga0070686_100039326
401 Ga0070693_100097200
402 Ga0070693_100129042
403 Ga0070665_100021809
404 Ga0070665_100026617
405 Ga0070665_100125151
406 Ga0070704_100326181
407 Ga0068855_100005544
408 Ga0068855_100008695
409 Ga0068855_100027685
410 Ga0068855_100094075
411 Ga0068855_100110767
412 Ga0070664_100009177
413 Ga0070664_100046707
414 Ga0070664_100273926
415 Ga0068857_100002833
416 Ga0068857_100004445
417 Ga0068857_100022145
418 Ga0068856_100007942
419 Ga0068856_100106414
420 Ga0068856_100201551
421 Ga0068856_100258980
422 Ga0068859_100007241
423 Ga0068859_100022521
424 Ga0068864_100127284
425 Ga0068863_100003585
426 Ga0068863_100018150
427 Ga0068863_100052505
428 Ga0068863_100313075
429 Ga0068858_100000622
430 Ga0068858_100004193
431 Ga0068858_100007290
432 Ga0068858_100038081
433 Ga0068858_100338729
434 Ga0068860_100012782
435 Ga0068862_100179315
436 Ga0081539_10016150
437 Ga0097621_100002683
438 Ga0097621_100021006
439 Ga0068871_100003868
440 Ga0068871_100013181
441 Ga0068871_100014134
442 Ga0068871_100017266
443 Ga0075428_100164504
444 Ga0075431_100011116
445 Ga0075431_100072201
446 Ga0075433_10149229
447 Ga0075429_100018702
448 Ga0097620_100007241
449 Ga0097620_100022521
450 Ga0105240_10000947
451 Ga0105240_10001367
452 Ga0105240_10027553
453 Ga0105240_10043005
454 Ga0105240_10114891
455 Ga0105240_10146069
456 Ga0105240_10147333
457 Ga0111539_10008713
458 Ga0111539_10099594
459 Ga0111539_10463061
460 Ga0105245_10007301
461 Ga0105245_10008044
462 Ga0105245_10015649
463 Ga0105245_10086127
464 Ga0105245_10101756
465 Ga0105245_10229160
466 Ga0105245_10368984
467 Ga0105247_10102341
468 Ga0114129_10016656
469 Ga0114129_10019999
470 Ga0114129_10054814
471 Ga0114129_10066604
472 Ga0114129_10370213
473 Ga0105243_10009604
474 Ga0105241_10009187
475 Ga0105241_10017502
476 Ga0105241_10033336
477 Ga0105241_10055603
478 Ga0105241_10077853
479 Ga0105241_10226548
480 Ga0105242_10006677
481 Ga0105242_10007759
482 Ga0105242_10049754
483 Ga0105242_10093513
484 Ga0105248_10002006
485 Ga0105248_10002208
486 Ga0105248_10064560
487 Ga0105248_10080295
488 Ga0105248_10184128
489 Ga0105248_10292691
490 Ga0105237_10022927
491 Ga0105237_10025755
492 Ga0105237_10111153
493 Ga0105238_10001452
494 Ga0105238_10004254
495 Ga0105238_10006572
496 Ga0105238_10011130
497 Ga0105238_10016454
498 Ga0105238_10022596
499 Ga0105238_10022819
500 Ga0105238_10228412
501 Ga0105249_10011263
502 Ga0105249_10043685
503 Ga0105239_10007778
504 Ga0105239_10018056
505 Ga0105239_10027486
506 Ga0105239_10059224
507 Ga0105246_10004013
508 Ga0157370_10002206
509 Ga0157370_10059185
510 Ga0157370_10076982
511 Ga0157370_10207052
512 Ga0157369_10004461
513 Ga0157369_10006447
514 Ga0157369_10014855
515 Ga0157369_10091839
516 Ga0157369_10120647
517 Ga0157369_10177725
518 Ga0157374_10010186
519 Ga0157374_10134447
520 Ga0157378_10013071
521 Ga0157378_10014692
522 Ga0157378_10025894
523 Ga0157378_10369474
524 Ga0163162_10012765
525 Ga0163162_10016854
526 Ga0163162_10040819
527 Ga0163162_10138528
528 Ga0163162_10171979
529 Ga0163162_10180931
530 Ga0157372_10006349
531 Ga0157372_10025123
532 Ga0157372_10136690
533 Ga0157372_10152113
534 Ga0157372_10178026
535 Ga0157372_10313091
536 Ga0157375_10001702
537 Ga0157375_10002517
538 Ga0157375_10009199
539 Ga0157375_10200780
540 Ga0163163_10020878
541 Ga0163163_10025277
542 Ga0163163_10061527
543 Ga0163163_10061732
544 Ga0163163_10090271
545 Ga0163163_10147821
546 Ga0163163_10177883
547 Ga0163163_10235017
548 Ga0157380_10242603
549 Ga0157380_10245262
550 Ga0157379_10000180
551 Ga0157376_10025293
552 Ga0157376_10118897
553 Ga0157376_10253527
554 Ga0213875_10020558
555 Ga0207654_10004334
556 Ga0207654_10012277
557 Ga0207654_10033797
558 Ga0207707_10003944
559 Ga0207707_10101958
560 Ga0207695_10002729
561 Ga0207695_10003979
562 Ga0207695_10004859
563 Ga0207695_10005342
564 Ga0207671_10041727
565 Ga0207671_10064214
566 Ga0207660_10313091
567 Ga0207662_10042520
568 Ga0207657_10015413
569 Ga0207652_10127764
570 Ga0207694_10002109
571 Ga0207694_10008285
572 Ga0207694_10020074
573 Ga0207694_10147034
574 Ga0207694_10189879
575 Ga0207694_10242443
576 Ga0207650_10113131
577 Ga0207659_10001525
578 Ga0207659_10009742
579 Ga0207659_10273887
580 Ga0207687_10004453
581 Ga0207687_10014157
582 Ga0207687_10032016
583 Ga0207687_10050670
584 Ga0207700_10135209
585 Ga0207644_10097132
586 Ga0207686_10022259
587 Ga0207686_10023268
588 Ga0207686_10096505
589 Ga0207686_10222941
590 Ga0207670_10165140
591 Ga0207669_10073382
592 Ga0207704_10246932
593 Ga0207691_10049475
594 Ga0207691_10111974
595 Ga0207711_10002005
596 Ga0207711_10036167
597 Ga0207711_10038418
598 Ga0207711_10054130
599 Ga0207711_10374343
600 Ga0207689_10315437
601 Ga0207661_10010314
602 Ga0207661_10044322
603 Ga0207679_10037430
604 Ga0207667_10002914
605 Ga0207667_10032259
606 Ga0207667_10198628
607 Ga0207667_10205213
608 Ga0207651_10005010
609 Ga0207651_10006103
610 Ga0207651_10035332
611 Ga0207651_10116900
612 Ga0207712_10010307
613 Ga0207658_10006183
614 Ga0207677_10001199
615 Ga0207677_10015029
616 Ga0207703_10010781
617 Ga0207703_10065343
618 Ga0207703_10298955
619 Ga0207639_10157605
620 Ga0207708_10082183
621 Ga0207702_10205866
622 Ga0207702_10222673
623 Ga0207641_10000841
624 Ga0207641_10040207
625 Ga0207641_10125543
626 Ga0207641_10186016
627 Ga0207648_10016733
628 Ga0207648_10134228
629 Ga0207674_10001681
630 Ga0207674_10001855
631 Ga0207674_10004944
632 Ga0207674_10066520
633 Ga0207674_10266791
634 Ga0207683_10315573
635 Ga0268266_10008666
636 Ga0268264_10006872
637 Ga0265316_10017517
638 Ga0265313_10001600
639 Ga0265314_10000216
640 Ga0265314_10024983
641 Ga0373934_0007397
642 Ga0373934_0009064
643 Ga0373953_0088516
644 Ga0373954_0000896
645 Ga0373954_0017895
646 Ga0373955_0024423
647 Ga0373927_0001768
648 Ga0373937_0001934
649 Ga0373937_0026407
650 Ga0373937_0409960
651 Ga0373925_0079108
652 Ga0373925_0419763
653 Ga0436364_0398836
654 Ga0436364_0609295
655 Ga0495592_0066296
656 Ga0495651_0002760
657 Ga0495651_0024346
658 Ga0495651_0155773
659 Ga0495580_0007917
660 Ga0495580_0028693
661 Ga0495580_0162742
662 Ga0495582_0058204
663 Ga0495664_0053541
664 Ga0495608_0144130
665 Ga0495630_0016148
666 Ga0495665_0024543
667 Ga0495587_0007009
668 Ga0495645_0116196
669 Ga0495645_0125696
670 Ga0495645_0132862
671 Ga0495667_0008130
672 Ga0495667_0012348
673 Ga0495634_0020058
674 Ga0495599_0015745
675 Ga0495613_0059492
676 Ga0495581_0221752
677 Ga0495604_0052080
678 Ga0495604_0057037
679 Ga0495636_0015611
680 Ga0495636_0035705
681 Ga0495674_0007240
682 Ga0495674_0020428
683 Ga0495674_0100974
684 Ga0495674_0113950
685 Ga0495675_0017380
686 Ga0495684_0003881
687 Ga0495684_0005574
688 Ga0495684_0023239
689 Ga0495684_0062262
690 Ga0495684_0065838
691 Ga0495684_0117170
692 Ga0495602_0004954
693 Ga0495602_0079525
694 Ga0495602_0291037
695 Ga0496112_0172373
696 nmdc:mga05p37_105750_c1
697 nmdc:mga05p37_222398_c1
698 nmdc:mga05p37_223294_c1
699 nmdc:mga05p37_24196_c1
700 nmdc:mga09592_122255_c1
701 nmdc:mga06r32_34822_c1
702 nmdc:mga08y16_302449_c1
703 nmdc:mga08y16_491746_c1
704 nmdc:mga0n895_225301_c1
705 nmdc:mga0rr50_178251_c1
706 nmdc:mga0rr50_199313_c1
707 nmdc:mga0rr50_60844_c1
708 nmdc:mga0rr50_64254_c1
709 nmdc:mga0a205_13586_c2
710 Ga0500568_0004343

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12727

PBP_like

PBP superfamily domain

171

362

0.98

PF01381

HTH_3

Helix-turn-helix

22

76

0.97

PF12844

HTH_19

Helix-turn-helix domain

20

82

0.94

PF13560

HTH_31

Helix-turn-helix domain

8

79

0.91

PF13443

HTH_26

Cro/C1-type HTH DNA-binding domain

21

82

0.9

PF13531

SBP_bac_11

Bacterial extracellular solute-binding protein

219

371

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
2xj3-assembly1.cif.gz_B high resolution structure of the t55c mutant of cylr2. 0.9753 6 66
3jxc-assembly1.cif.gz_L crystal structure of the p22 c2 repressor protein in complex with synthetic operator 9t in the presence of tl+ 0.9656 8 60
3u3w-assembly1.cif.gz_B crystal structure of bacillus thuringiensis plcr in complex with the peptide papr7 and dna 0.9554 8 59
1adr-assembly1.cif.gz_A determination of the nuclear magnetic resonance structure of the dna-binding domain of the p22 c2 repressor (1-76) in solution and comparison with the dna-binding domain of the 434 repressor 0.9504 8 60
1utx-assembly1.cif.gz_B regulation of cytolysin expression by enterococcus faecalis: role of cylr2 0.9502 4 68
ID Description Score Start End Superfamily
2r1jL00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.9676 8 60 1.10.260.40
3jxbD00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.9669 8 60 1.10.260.40
3u3wB01 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.9554 8 59 1.10.260.40
1adrA00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.9504 8 60 1.10.260.40
3f51C00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.9478 8 61 1.10.260.40
ID Description Score Start End GO Terms
AF-A0A0L6TYU3-F1-model_v4 DNA-binding protein 0.9907 4 66 GO:0003677
AF-A0A381Y454-F1-model_v4 HTH cro/C1-type domain-containing protein 0.9888 4 66 GO:0003677
AF-A0A1E8TXZ6-F1-model_v4 Transcriptional regulator 0.9883 4 65 GO:0003677
AF-X1H0H4-F1-model_v4 HTH cro/C1-type domain-containing protein 0.9883 4 66 GO:0003677
GO:0016020
AF-A0A843C9N3-F1-model_v4 Helix-turn-helix transcriptional regulator 0.9873 4 66 GO:0003677

Map