F417253

General Info

Members Datasets Scaffolds Average Seq Length
347 242 274 560

Family's Representative Sequence

Representative Sequence 3300046460|Ga0495638_0018614|Ga0495638_0018614_1458_3383
Length 641
Sequence MVSKAVYSSDYGAIWGAGGAAPGRCSLSTQRLCHFAVLVRRCPARERTDSGSRIAKNDSLCLQRGELLETFMNMPLESTALAFQFPLADGVETHRVFNQASACIGHNAFTGDVALRELVARHAAWSIPDATAVGALAGNEEVQDLARLANEHSPQLRTHDRFGNRLDWVEFHPAWHQLMALGFAHGVPSLAWTTNEPSGHFARAVLSYLWNQVENGTGCPTGMAYAACAGFAGRPEFALWREKTLSGRYDPRRLPLPQKAGAVIGYAMTEKQGGSDLRQTQTTATFVGTENGARIYNVTGHKWFFSVPTSDGFYTLAQTNSGVSCLFVPRFLPDGSANRVAVQRLKDKCGNRSNASSEVEFNKTWAMLVGEEGRGIREILSHAHLTRLDFAVGSAGLMRQALTLAINHASTRDGFGRRMADLPMQTNVLADLALESEAAMLSAMRVARATDSMESNERERLLARVATPVVKYWNCQRATYFVYEALQVHGGNGFIMENPIARLYREAPLNSIWEGTTNMMCMDVVRALGREKGSLEVFLDEVSQPGVANAAYAKFIAGLRDDLSAGAVDEGNSRAIVTRMALALQASEMLRHSDGAVAQRFVESRLGGQHAGVMGTLATGTDLRGIVSRADVSEAAQSVSI

Samples

Sample ID Description Type Environment
1 2511231002 Polaromonas sp. CF318 Isolate Rhizosphere
2 2513237096 Bradyrhizobium pachyrhizi USDA 3259 Isolate Nodule
3 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
4 2513237137 Bradyrhizobium elkanii USDA 94 Isolate Nodule
5 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
6 2513237145 Bradyrhizobium elkanii USDA 3254 Isolate Nodule
7 2517572143 Bradyrhizobium elkanii USDA 76 Isolate Nodule
8 2524023228 Bradyrhizobium sp. Th.b2 Isolate Nodule
9 2599185214 Variovorax sp. NFACC26 Isolate Rhizoplane
10 2599185226 Variovorax sp. NFACC27 Isolate Rhizoplane
11 2599185227 Variovorax sp. NFACC28 Isolate Rhizoplane
12 2599185229 Variovorax sp. NFACC29 Isolate Endosphere
13 2643221609 Acidovorax sp. Root217 Isolate Unclassified
14 2643221733 Bosea sp. Root381 Isolate Unclassified
15 2643221734 Bosea sp. Root670 Isolate Unclassified
16 2643221736 Bosea sp. Root483D1 Isolate Unclassified
17 2667528175 Rhizobium tropici NFR14 Isolate Rhizoplane
18 2738541277 Variovorax sp. GV051 Isolate Unclassified
19 2738543019 Variovorax sp. GV040 Isolate Unclassified
20 2791355197 Bradyrhizobium sp. C9 Isolate Nodule
21 2818991446 Variovorax sp. 1180 Isolate Unclassified
22 2818991467 Bosea vestrisii 3192 Isolate Unclassified
23 2824653114 Bradyrhizobium sp. HAMBI 2142 Isolate Unclassified
24 2831265667 Variovorax guangxiensis DSM 27352 Isolate Rhizosphere
25 2838054893 Variovorax guangxiensis 34/80 Isolate Nodule
26 2841760612 Bosea sp. Tri-49 Isolate Nodule
27 2841911363 Bosea caraganae RCAM04685 Isolate Nodule
28 2841917233 Bosea caraganae RCAM04680 Isolate Nodule
29 2844104063 Bosea sp. Tri-39 Isolate Nodule
30 2851182111 Bosea sp. Tri-44 Isolate Nodule
31 2851246043 Bosea sp. Tri-54 Isolate Nodule
32 2858950400 Achromobacter sp. K91 Isolate Unclassified
33 2874604998 Bradyrhizobium sp. LMTR 3 Isolate Nodule
34 2876808645 Bradyrhizobium algeriense RST89 Isolate Unclassified
35 2879110137 Bradyrhizobium algeriense RST91 Isolate Nodule
36 2885192300 Variovorax sp. MHTC-1 Isolate Rhizosphere
37 2885198086 Variovorax sp. 679 Isolate Unclassified
38 2885211737 Variovorax sp. 553 Isolate Unclassified
39 2894023352 Diaphorobacter ruginosibacter DSM 27467 Isolate Nodule
40 2899924645 Variovorax sp. 369 Isolate Unclassified
41 2903768456 Bradyrhizobium sp. Leo121 Isolate Unclassified
42 2904699407
43 2906635258 Bradyrhizobium sp. USDA 3458 Isolate Unclassified
44 2906660503 Bradyrhizobium brasilense UFLA 03-321 Isolate Unclassified
45 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
46 2922425934
47 2928037797 Variovorax sp. 1126 Isolate Unclassified
48 2928044640 Variovorax sp. 1128 Isolate Unclassified
49 2928051484 Variovorax sp. 1133 Isolate Unclassified
50 2928064002 Variovorax sp. 1140 Isolate Rhizosphere
51 2928070936 Variovorax gossypii 1167 Isolate Unclassified
52 2928084124 Variovorax paradoxus 1218 Isolate Unclassified
53 2935630451 Bradyrhizobium sp. I1.14.4 Isolate Nodule
54 2941507105 Bradyrhizobium sp. i1.12.3 Isolate Nodule
55 2941515067 Bradyrhizobium sp. i1.14.1 Isolate Nodule
56 2941523033 Bradyrhizobium sp. i1.8.4 Isolate Nodule
57 2945972063 Variovorax paradoxus W2I8 Isolate Rhizosphere
58 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
59 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
60 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
61 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
62 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
63 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
64 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
65 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
66 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
67 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
68 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
69 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
70 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
71 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
72 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
73 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
74 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
75 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
76 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
77 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
78 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
79 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
80 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
81 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
82 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
83 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
84 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
85 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
86 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
87 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
88 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
89 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
90 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
91 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
92 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
93 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
94 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
95 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
96 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
97 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
98 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
99 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
100 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
101 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
102 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
103 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
104 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
105 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
106 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
107 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
108 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
109 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
110 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
111 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
112 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
113 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
114 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
115 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
116 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
117 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
118 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
119 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
120 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
121 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
122 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
123 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
124 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
125 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
126 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
127 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
128 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
129 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
130 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
131 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
132 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
133 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
134 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
135 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
136 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
137 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
138 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
139 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
140 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
141 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
142 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
143 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
144 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
145 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
146 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
147 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
148 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
149 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
150 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
151 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
152 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
153 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
154 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
155 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
156 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
157 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
158 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
159 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
160 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
161 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
162 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
163 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
164 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
165 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
166 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
167 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
168 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
169 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
170 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
171 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
172 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
173 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
174 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
175 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
176 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
177 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
178 3300033442 Root nodule microbial communities collected in Santa Monica, California, United States - Edamame nodules 1 Metagenome Nodule
179 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
180 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
181 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
182 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
183 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
184 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
185 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
186 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
187 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
188 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
189 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
190 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
191 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
192 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
193 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
194 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
195 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
196 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
197 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
198 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
199 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
200 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
201 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
202 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
203 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
204 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
205 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
206 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
207 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
208 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
209 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
210 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
211 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
212 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
213 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
214 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
215 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
216 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
217 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
218 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
219 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
220 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
221 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
222 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
223 3300053110 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 endosphere Metagenome Endosphere
224 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
225 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
226 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
227 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
228 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
229 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
230 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
231 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
232 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
233 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
234 3300053733 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 endosphere Metagenome Endosphere
235 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
236 8002392321 Alcaligenes faecalis Mc250 Isolate Rhizosphere
237 8006933436 Bradyrhizobium septentrionale 7(2017) Isolate Unclassified
238 8006973647 Bradyrhizobium septentrionale 162S2 Isolate Nodule
239 8019555841 Bradyrhizobium sp. JR6.1 Isolate Nodule
240 8019565922 Bradyrhizobium sp. JR3.5 Isolate Nodule
241 8056681323 Bradyrhizobium cenepequi CNPSo 4026 Isolate Nodule
242 8057529695 Bosea vestrisii A18/4-2 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 79.42
Metatranscriptomes 0
Isolates 20.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 37.18
Nodule 9.51
Rhizoplane 5.76
Rhizosphere 33.72
Stem 0
Stem Tuber 0
Unclassified 13.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25156J39149_1000358 3300002705 Bacteria 29530
2 JGI25158J39367_1003203 3300002739 Bacteria 2557
3 JGI25152J39213_1002164 3300002773 Bacteria 7699
4 JGI25150J39212_1000330 3300002774 Bacteria 23289
5 JGI25159J45721_1002144 3300002987 Bacteria 7699
6 JGI25151J46595_10000028 3300003187 Bacteria 208373
7 JGI25151J46595_10004180 3300003187 Bacteria 7699
8 JGI25153J46596_10004302 3300003215 Bacteria 7699
9 JGI25160J50197_1002998 3300003354 Bacteria 7699
10 JGI25160J50197_1005263 3300003354 Bacteria 5415
11 JGI25161J50226_1001327 3300003374 Bacteria 7683
12 JGI25161J50226_1004599 3300003374 Bacteria 2852
13 Ga0055535_1000612 3300003761 Bacteria 29305
14 Ga0055542_1000004 3300003762 Bacteria 553532
15 Ga0055526_1000333 3300003771 Bacteria 39007
16 Ga0055526_1003770 3300003771 Bacteria 9455
17 Ga0055526_1004545 3300003771 Bacteria 8297
18 Ga0055526_1004837 3300003771 Bacteria 7951
19 Ga0055526_1005057 3300003771 Bacteria 7699
20 Ga0055537_1001828 3300003773 Bacteria 7699
21 Ga0055524_1000020 3300003775 Bacteria 227971
22 Ga0055524_1000051 3300003775 Bacteria 146215
23 Ga0055524_1003418 3300003775 Bacteria 7711
24 Ga0055524_1003425 3300003775 Bacteria 7699
25 Ga0055536_1003763 3300003781 Bacteria 8019
26 Ga0055534_1000568 3300003784 Bacteria 19411
27 Ga0055528_1003609 3300003790 Bacteria 7699
28 Ga0055530_10001436 3300003791 Bacteria 17450
29 Ga0055540_1003431 3300003792 Bacteria 7662
30 Ga0055531_10004110 3300003794 Bacteria 8997
31 Ga0055543_1000587 3300004625 Bacteria 20015
32 Ga0055543_1001936 3300004625 Bacteria 7405
33 Ga0065165_1000132 3300005262 Bacteria 128732
34 Ga0065165_1000141 3300005262 Bacteria 125536
35 Ga0065165_1001927 3300005262 Bacteria 19803
36 Ga0068869_100075011 3300005334 Bacteria 2512
37 Ga0070666_10065387 3300005335 Bacteria 2468
38 Ga0068868_100014233 3300005338 Bacteria 5859
39 Ga0070668_100016613 3300005347 Bacteria 5502
40 Ga0070668_100051477 3300005347 Bacteria 3173
41 Ga0070668_100105334 3300005347 Bacteria 2240
42 Ga0070675_100001393 3300005354 Bacteria 17744
43 Ga0070671_100044845 3300005355 Bacteria 3674
44 Ga0070674_100000311 3300005356 Bacteria 23932
45 Ga0070673_100023007 3300005364 Bacteria 4547
46 Ga0070673_100126465 3300005364 Bacteria 2139
47 Ga0070667_100089030 3300005367 Bacteria 2651
48 Ga0070709_10011652 3300005434 Bacteria 4907
49 Ga0070713_100095130 3300005436 Bacteria 2569
50 Ga0070678_100001293 3300005456 Bacteria 13272
51 Ga0070678_100071187 3300005456 Bacteria 2603
52 Ga0068853_100021612 3300005539 Bacteria 5368
53 Ga0068853_100085081 3300005539 Bacteria 2772
54 Ga0070672_100010836 3300005543 Bacteria 6338
55 Ga0070665_100063846 3300005548 Bacteria 3692
56 Ga0070665_100099983 3300005548 Bacteria 2904
57 Ga0070665_100105326 3300005548 Bacteria 2822
58 Ga0070665_100121826 3300005548 Bacteria 2610
59 Ga0070665_100176461 3300005548 Bacteria 2137
60 Ga0068852_100017346 3300005616 Bacteria 5646
61 Ga0068864_100007019 3300005618 Bacteria 9242
62 Ga0068864_100043419 3300005618 Bacteria 3849
63 Ga0068861_100097758 3300005719 Bacteria 2329
64 Ga0068861_100116304 3300005719 Bacteria 2150
65 Ga0068870_10003782 3300005840 Bacteria 6440
66 Ga0068863_100000767 3300005841 Bacteria 32223
67 Ga0068863_100022849 3300005841 Bacteria 5975
68 Ga0068863_100058400 3300005841 Bacteria 3651
69 Ga0068858_100006885 3300005842 Bacteria 11051
70 Ga0068860_100032149 3300005843 Bacteria 5044
71 Ga0081455_10001489 3300005937 Bacteria 28957
72 Ga0075365_10014903 3300006038 Bacteria 4687
73 Ga0075365_10047828 3300006038 Bacteria 2813
74 Ga0075365_10065058 3300006038 Bacteria 2444
75 Ga0075368_10005969 3300006042 Bacteria 4221
76 Ga0075363_100003232 3300006048 Bacteria 6886
77 Ga0075363_100005182 3300006048 Bacteria 5769
78 Ga0075363_100037036 3300006048 Bacteria 2561
79 Ga0075367_10013776 3300006178 Bacteria 4359
80 Ga0075369_10001251 3300006186 Bacteria 8639
81 Ga0097621_100132580 3300006237 Bacteria 2122
82 Ga0075370_10062974 3300006353 Bacteria 2113
83 Ga0068871_100079252 3300006358 Bacteria 2717
84 Ga0075431_100076150 3300006847 Bacteria 3462
85 Ga0068865_100053087 3300006881 Bacteria 2812
86 Ga0105245_10002025 3300009098 Bacteria 18380
87 Ga0157371_10056813 3300013102 Bacteria 2776
88 Ga0157370_10102019 3300013104 Bacteria 2687
89 Ga0171462_1007 3300013250 Bacteria 417698
90 Ga0171462_1032 3300013250 Bacteria 98473
91 Ga0157374_10073631 3300013296 Bacteria 3224
92 Ga0163162_10027923 3300013306 Bacteria 5582
93 Ga0157375_10001502 3300013308 Bacteria 20044
94 Ga0157379_10008320 3300014968 Bacteria 9018
95 Ga0157376_10008828 3300014969 Bacteria 7294
96 Ga0209436_102351 3300025208 Bacteria 5770
97 Ga0209436_107432 3300025208 Bacteria 2291
98 Ga0209672_100468 3300025228 Bacteria 22756
99 Ga0209147_100609 3300025229 Bacteria 19540
100 Ga0209258_100022 3300025242 Bacteria 553584
101 Ga0207425_1000485 3300025245 Bacteria 25015
102 Ga0209677_100190 3300025253 Bacteria 50081
103 Ga0209148_1000034 3300025254 Bacteria 553584
104 Ga0209759_1000626 3300025256 Bacteria 33660
105 Ga0209129_1000023 3300025258 Bacteria 420646
106 Ga0209565_1000304 3300025263 Bacteria 46114
107 Ga0209565_1001331 3300025263 Bacteria 11278
108 Ga0209673_1000265 3300025273 Bacteria 98501
109 Ga0209673_1002107 3300025273 Bacteria 14923
110 Ga0209673_1010826 3300025273 Bacteria 3811
111 Ga0209130_1000113 3300025284 Bacteria 130804
112 Ga0209130_1000178 3300025284 Bacteria 90293
113 Ga0209130_1000208 3300025284 Bacteria 78707
114 Ga0209675_1000127 3300025291 Bacteria 104257
115 Ga0209675_1000459 3300025291 Bacteria 31303
116 Ga0209675_1000692 3300025291 Bacteria 23450
117 Ga0209675_1001278 3300025291 Bacteria 15036
118 Ga0209676_1000005 3300025292 Bacteria 1076001
119 Ga0209676_1004021 3300025292 Bacteria 8468
120 Ga0209025_1000008 3300025294 Bacteria 1130876
121 Ga0209025_1000717 3300025294 Bacteria 56308
122 Ga0209025_1002291 3300025294 Bacteria 20787
123 Ga0209025_1012139 3300025294 Bacteria 5566
124 Ga0209564_1000048 3300025295 Bacteria 364806
125 Ga0209564_1000049 3300025295 Bacteria 362075
126 Ga0209564_1000065 3300025295 Bacteria 315205
127 Ga0209564_1000074 3300025295 Bacteria 286043
128 Ga0209564_1000394 3300025295 Bacteria 78197
129 Ga0209564_1001115 3300025295 Bacteria 31628
130 Ga0209758_1000064 3300025297 Bacteria 311812
131 Ga0209050_1000007 3300025298 Bacteria 1187891
132 Ga0209050_1000471 3300025298 Bacteria 71466
133 Ga0209256_1000014 3300025299 Bacteria 687409
134 Ga0209256_1000041 3300025299 Bacteria 364827
135 Ga0209256_1000109 3300025299 Bacteria 184928
136 Ga0209256_1000115 3300025299 Bacteria 173607
137 Ga0209256_1000200 3300025299 Bacteria 112931
138 Ga0209256_1002488 3300025299 Bacteria 14923
139 Ga0209256_1017622 3300025299 Bacteria 2361
140 Ga0207426_1000001 3300025302 Bacteria 1341301
141 Ga0207426_1000031 3300025302 Bacteria 460699
142 Ga0207426_1005483 3300025302 Bacteria 5778
143 Ga0209051_1000009 3300025303 Bacteria 706778
144 Ga0209257_1000011 3300025304 Bacteria 1112630
145 Ga0209257_1002164 3300025304 Bacteria 20394
146 Ga0209257_1009440 3300025304 Bacteria 5222
147 Ga0207682_10001188 3300025893 Bacteria 12077
148 Ga0207682_10026043 3300025893 Bacteria 2322
149 Ga0207688_10084738 3300025901 Bacteria 1815
150 Ga0207680_10020850 3300025903 Bacteria 3538
151 Ga0207645_10000629 3300025907 Bacteria 29266
152 Ga0207659_10028503 3300025926 Bacteria 3795
153 Ga0207659_10112038 3300025926 Bacteria 2076
154 Ga0207644_10011748 3300025931 Bacteria 5796
155 Ga0207644_10028782 3300025931 Bacteria 3850
156 Ga0207706_10026828 3300025933 Bacteria 5156
157 Ga0207706_10073567 3300025933 Bacteria 3005
158 Ga0207669_10002151 3300025937 Bacteria 8346
159 Ga0207704_10057289 3300025938 Bacteria 2393
160 Ga0207691_10000463 3300025940 Bacteria 40122
161 Ga0207691_10034036 3300025940 Bacteria 4742
162 Ga0207689_10042931 3300025942 Bacteria 3739
163 Ga0207668_10047160 3300025972 Bacteria 2948
164 Ga0207658_10010956 3300025986 Bacteria 6173
165 Ga0207703_10012245 3300026035 Bacteria 6688
166 Ga0207639_10003661 3300026041 Bacteria 10324
167 Ga0207708_10019309 3300026075 Bacteria 5136
168 Ga0207676_10004678 3300026095 Bacteria 9695
169 Ga0207676_10018222 3300026095 Bacteria 5100
170 Ga0207675_100046276 3300026118 Bacteria 4064
171 Ga0207675_100046440 3300026118 Bacteria 4057
172 Ga0207683_10000265 3300026121 Bacteria 46746
173 Ga0207683_10027210 3300026121 Bacteria 4941
174 Ga0268266_10013722 3300028379 Bacteria 6977
175 Ga0268266_10034533 3300028379 Bacteria 4301
176 Ga0268264_10078466 3300028381 Bacteria 2815
177 Ga0307511_10000036 3300030521 Bacteria 103249
178 Ga0307509_10049700 3300031507 Bacteria 4494
179 Ga0307509_10081542 3300031507 Bacteria 3341
180 Ga0307408_100046714 3300031548 Bacteria 3097
181 Ga0307408_100112745 3300031548 Bacteria 2092
182 Ga0307413_10001173 3300031824 Bacteria 9644
183 Ga0307410_10013766 3300031852 Bacteria 4733
184 Ga0307406_10004113 3300031901 Bacteria 7923
185 Ga0307406_10084183 3300031901 Bacteria 2123
186 Ga0307412_10006741 3300031911 Bacteria 6510
187 Ga0307409_100046025 3300031995 Bacteria 3299
188 Ga0307416_100017421 3300032002 Bacteria 5027
189 Ga0307414_10012317 3300032004 Bacteria 5051
190 Ga0307411_10001216 3300032005 Bacteria 10214
191 Ga0307415_100002867 3300032126 Bacteria 8630
192 Ga0307510_10008705 3300033180 Bacteria 12087
193 Ga0315911_1000002 3300033442 Bacteria 926833
194 Ga0373954_0000522 3300035118 Bacteria 14412
195 Ga0373937_0023437 3300036401 Bacteria 5558
196 Ga0395905_0031729 3300037471 Bacteria 4971
197 Ga0436365_1615563 3300039437 Bacteria 2524
198 Ga0495603_0015584 3300046455 Bacteria 4601
199 Ga0495629_0118142 3300046459 Bacteria 1848
200 Ga0495638_0018614 3300046460 Bacteria 4610
201 Ga0495616_0001557 3300046513 Bacteria 15799
202 Ga0495631_0000653 3300046518 Bacteria 22503
203 Ga0495654_0023128 3300046530 Bacteria 3220
204 Ga0495599_0039551 3300046678 Bacteria 2963
205 Ga0495676_0050157 3300047321 Bacteria 3349
206 Ga0495686_0105146 3300047472 Bacteria 1699
207 Ga0496104_0001490 3300048907 Bacteria 20205
208 Ga0496104_0005614 3300048907 Bacteria 10981
209 Ga0496105_0014932 3300048908 Bacteria 6183
210 Ga0496106_0018049 3300048909 Bacteria 5216
211 Ga0496107_0052078 3300048910 Bacteria 2953
212 Ga0496108_0007664 3300048911 Bacteria 8739
213 Ga0496108_0011490 3300048911 Bacteria 7197
214 Ga0496108_0015564 3300048911 Bacteria 6203
215 Ga0496109_0000719 3300048912 Bacteria 27569
216 Ga0496110_0002978 3300048913 Bacteria 12847
217 Ga0496111_0034427 3300048914 Bacteria 3616
218 Ga0496112_0006729 3300048915 Bacteria 10122
219 Ga0496113_0002473 3300048916 Bacteria 10761
220 Ga0496113_0007944 3300048916 Bacteria 6869
221 Ga0496115_0009908 3300048918 Bacteria 7099
222 Ga0496115_0018701 3300048918 Bacteria 5326
223 Ga0496118_0005285 3300048921 Bacteria 14737
224 Ga0496121_0078655 3300048924 Bacteria 2621
225 Ga0496122_0005922 3300048925 Bacteria 14309
226 Ga0496122_0024625 3300048925 Bacteria 5261
227 Ga0496122_0055119 3300048925 Bacteria 2978
228 Ga0496123_0010937 3300048926 Bacteria 7938
229 Ga0496123_0055041 3300048926 Bacteria 2613
230 Ga0496125_0000621 3300048928 Bacteria 59634
231 Ga0496125_0025427 3300048928 Bacteria 5421
232 Ga0496125_0098218 3300048928 Bacteria 2167
233 Ga0496126_0004505 3300048929 Bacteria 16596
234 Ga0496126_0013937 3300048929 Bacteria 8155
235 Ga0496126_0035490 3300048929 Bacteria 4673
236 Ga0501043_0049765 3300049579 Bacteria 3295
237 Ga0501047_0020935 3300049581 Bacteria 6282
238 Ga0501044_0040510 3300049823 Bacteria 4855
239 Ga0501044_0051453 3300049823 Bacteria 4247
240 nmdc:mga03n38_1388_c1 3300050490 Bacteria 6886
241 nmdc:mga00v17_2794_c1 3300050491 Bacteria 8968
242 nmdc:mga0yw44_20609_c1 3300050492 Bacteria 3663
243 nmdc:mga0yw44_27157_c1 3300050492 Bacteria 3276
244 nmdc:mga0yw44_42307_c1 3300050492 Bacteria 2716
245 nmdc:mga0yw44_70079_c1 3300050492 Bacteria 2173
246 nmdc:mga06z11_10400_c1 3300050494 Bacteria 3462
247 nmdc:mga06z11_2680_c1 3300050494 Bacteria 6818
248 nmdc:mga06z11_3396_c1 3300050494 Bacteria 6154
249 nmdc:mga07m45_10998_c1 3300050496 Bacteria 4744
250 nmdc:mga07m45_4527_c1 3300050496 Bacteria 6807
251 nmdc:mga07m45_49070_c1 3300050496 Bacteria 2375
252 nmdc:mga0sz30_6812_c1 3300050516 Bacteria 4264
253 Ga0500644_0001323 3300053088 Bacteria 6679
254 Ga0500646_0002252 3300053090 Bacteria 5018
255 Ga0500583_0009487 3300053092 Bacteria 3561
256 Ga0500651_0000493 3300053093 Bacteria 20428
257 Ga0500651_0082724 3300053093 Bacteria 1987
258 Ga0500641_0002003 3300053096 Bacteria 7226
259 Ga0500571_000249 3300053110 Bacteria 20425
260 Ga0500593_000479 3300053117 Bacteria 15775
261 Ga0500594_0000229 3300053118 Bacteria 13576
262 Ga0500655_000300 3300053133 Bacteria 11244
263 Ga0500658_0000461 3300053134 Bacteria 17378
264 Ga0500658_0000829 3300053134 Bacteria 12710
265 Ga0500568_0016208 3300053139 Bacteria 3319
266 Ga0500604_0003526 3300053151 Bacteria 4213
267 Ga0500616_0049851 3300053153 Bacteria 2213
268 Ga0500634_0013985 3300053161 Bacteria 4224
269 Ga0500637_0007833 3300053178 Bacteria 5363
270 Ga0500645_000430 3300053730 Bacteria 28958
271 Ga0500645_000896 3300053730 Bacteria 17225
272 Ga0500645_004068 3300053730 Bacteria 5732
273 Ga0500552_000589 3300053733 Bacteria 3402
274 Ga0501082_0116306 3300060353 Bacteria 2316

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025893 Ga0207682_10026043 Ga0207682_100260431 446
2 3300047472 Ga0495686_0105146 Ga0495686_0105146_17_1390 447
3 3300025901 Ga0207688_10084738 Ga0207688_100847382 455
4 3300053139 Ga0500568_0016208 Ga0500568_0016208_1904_3304 457
5 iso_pu_bacteria 8019555841 8019565390 463
6 3300005548 Ga0070665_100176461 Ga0070665_1001764611 506
7 3300049579 Ga0501043_0049765 Ga0501043_0049765_928_2577 519
8 3300049581 Ga0501047_0020935 Ga0501047_0020935_3198_4847 519
9 3300049823 Ga0501044_0051453 Ga0501044_0051453_1590_3239 519
10 3300006038 Ga0075365_10014903 Ga0075365_100149035 521
11 3300025294 Ga0209025_1002291 Ga0209025_10022912 521
12 3300005434 Ga0070709_10011652 Ga0070709_100116523 524
13 3300005548 Ga0070665_100105326 Ga0070665_1001053262 524
14 3300025294 Ga0209025_1012139 Ga0209025_10121392 524
15 3300025926 Ga0207659_10112038 Ga0207659_101120383 524
16 3300005262 Ga0065165_1000141 Ga0065165_100014163 525
17 3300025284 Ga0209130_1000178 Ga0209130_100017864 525
18 3300025299 Ga0209256_1017622 Ga0209256_10176221 525
19 3300036401 Ga0373937_0023437 Ga0373937_0023437_1464_3107 525
20 iso_pu_bacteria 2643221733 2644732207 531
21 iso_pu_bacteria 2643221734 2644734994 531
22 iso_pu_bacteria 2643221736 2644745412 531
23 iso_pu_bacteria 2841760612 2841760923 531
24 iso_pu_bacteria 2844104063 2844106580 531
25 iso_pu_bacteria 2851182111 2851183732 531
26 iso_pu_bacteria 2851246043 2851246936 531
27 iso_pu_bacteria 8057529695 8057530855 531
28 3300049823 Ga0501044_0040510 Ga0501044_0040510_1477_3117 532
29 iso_pu_bacteria 2818991467 2819719546 533
30 iso_pu_bacteria 2917699015 2917704786 533
31 3300035118 Ga0373954_0000522 Ga0373954_0000522_3362_4999 534
32 3300046678 Ga0495599_0039551 Ga0495599_0039551_643_2280 534
33 3300003775 Ga0055524_1000020 Ga0055524_1000020180 535
34 3300005262 Ga0065165_1000132 Ga0065165_100013238 535
35 3300025273 Ga0209673_1010826 Ga0209673_10108263 535
36 3300025284 Ga0209130_1000208 Ga0209130_100020847 535
37 3300025291 Ga0209675_1000692 Ga0209675_100069217 535
38 3300025295 Ga0209564_1000049 Ga0209564_1000049303 535
39 3300025299 Ga0209256_1000014 Ga0209256_1000014336 535
40 3300025302 Ga0207426_1005483 Ga0207426_10054833 535
41 iso_pu_bacteria 2643221734 2644736354 535
42 iso_pu_bacteria 2643221736 2644743519 535
43 iso_pu_bacteria 2818991467 2819720422 535
44 iso_pu_bacteria 2841760612 2841764515 535
45 iso_pu_bacteria 2841911363 2841912913 535
46 iso_pu_bacteria 2841917233 2841918660 535
47 iso_pu_bacteria 2844104063 2844108037 535
48 iso_pu_bacteria 2851182111 2851187969 535
49 iso_pu_bacteria 2851246043 2851250143 535
50 iso_pu_bacteria 2917699015 2917702375 535
51 iso_pu_bacteria 8057529695 8057533414 535
52 3300005436 Ga0070713_100095130 Ga0070713_1000951302 536
53 3300047321 Ga0495676_0050157 Ga0495676_0050157_1490_3172 536
54 3300048907 Ga0496104_0005614 Ga0496104_0005614_7738_9420 536
55 3300048911 Ga0496108_0007664 Ga0496108_0007664_4673_6355 536
56 3300048912 Ga0496109_0000719 Ga0496109_0000719_4673_6355 536
57 3300048914 Ga0496111_0034427 Ga0496111_0034427_511_2193 536
58 3300048915 Ga0496112_0006729 Ga0496112_0006729_5703_7385 536
59 3300048916 Ga0496113_0002473 Ga0496113_0002473_1707_3389 536
60 3300048918 Ga0496115_0009908 Ga0496115_0009908_4845_6527 536
61 3300003187 JGI25151J46595_10000028 JGI25151J46595_10000028103 537
62 3300003771 Ga0055526_1000333 Ga0055526_100033325 537
63 3300013250 Ga0171462_1032 Ga0171462_103223 537
64 3300025294 Ga0209025_1000008 Ga0209025_1000008808 537
65 3300025295 Ga0209564_1000065 Ga0209564_100006577 537
66 3300025299 Ga0209256_1000200 Ga0209256_100020028 537
67 3300048925 Ga0496122_0024625 Ga0496122_0024625_306_1952 537
68 3300003771 Ga0055526_1003770 Ga0055526_10037705 538
69 3300003771 Ga0055526_1004837 Ga0055526_10048374 538
70 3300003775 Ga0055524_1000051 Ga0055524_100005175 538
71 3300005842 Ga0068858_100006885 Ga0068858_1000068852 538
72 3300013250 Ga0171462_1007 Ga0171462_1007139 538
73 3300014968 Ga0157379_10008320 Ga0157379_100083202 538
74 3300025291 Ga0209675_1000459 Ga0209675_100045910 538
75 3300025295 Ga0209564_1000048 Ga0209564_1000048189 538
76 3300025295 Ga0209564_1000074 Ga0209564_1000074127 538
77 3300025299 Ga0209256_1000041 Ga0209256_1000041189 538
78 3300025299 Ga0209256_1000109 Ga0209256_1000109132 538
79 3300026035 Ga0207703_10012245 Ga0207703_100122452 538
80 3300031901 Ga0307406_10084183 Ga0307406_100841832 538
81 3300060353 Ga0501082_0116306 Ga0501082_0116306_622_2277 538
82 3300006038 Ga0075365_10065058 Ga0075365_100650582 540
83 3300006048 Ga0075363_100003232 Ga0075363_1000032322 540
84 3300006048 Ga0075363_100005182 Ga0075363_1000051825 540
85 3300006048 Ga0075363_100037036 Ga0075363_1000370361 540
86 3300006847 Ga0075431_100076150 Ga0075431_1000761502 540
87 3300048907 Ga0496104_0001490 Ga0496104_0001490_2333_3988 540
88 3300048911 Ga0496108_0015564 Ga0496108_0015564_3108_4763 540
89 3300048913 Ga0496110_0002978 Ga0496110_0002978_6873_8528 540
90 3300048916 Ga0496113_0007944 Ga0496113_0007944_1639_3294 540
91 3300050490 nmdc:mga03n38_1388_c1 nmdc:mga03n38_1388_c1_900_2555 540
92 3300050491 nmdc:mga00v17_2794_c1 nmdc:mga00v17_2794_c1_905_2560 540
93 3300050492 nmdc:mga0yw44_27157_c1 nmdc:mga0yw44_27157_c1_673_2328 540
94 3300050492 nmdc:mga0yw44_70079_c1 nmdc:mga0yw44_70079_c1_252_1907 540
95 3300050494 nmdc:mga06z11_10400_c1 nmdc:mga06z11_10400_c1_1316_2971 540
96 3300050494 nmdc:mga06z11_2680_c1 nmdc:mga06z11_2680_c1_560_2215 540
97 3300050494 nmdc:mga06z11_3396_c1 nmdc:mga06z11_3396_c1_1497_3152 540
98 iso_pu_bacteria 2511231002 2511245588 540
99 iso_pu_bacteria 2513237096 2513654041 540
100 iso_pu_bacteria 2513237137 2513856793 540
101 iso_pu_bacteria 2513237145 2513918381 540
102 iso_pu_bacteria 2517572143 2517891385 540
103 iso_pu_bacteria 2524023228 2524538429 540
104 iso_pu_bacteria 2667528175 2671118835 540
105 iso_pu_bacteria 2791355197 2793066755 540
106 iso_pu_bacteria 2874604998 2874607361 540
107 iso_pu_bacteria 2876808645 2876814587 540
108 iso_pu_bacteria 2879110137 2879114672 540
109 iso_pu_bacteria 2904699407 2904704951 540
110 iso_pu_bacteria 2906635258 2906635344 540
111 iso_pu_bacteria 2906660503 2906666889 540
112 iso_pu_bacteria 2922425934 2922431409 540
113 iso_pu_bacteria 2935630451 2935634005 540
114 iso_pu_bacteria 2941507105 2941510692 540
115 iso_pu_bacteria 2941515067 2941518076 540
116 iso_pu_bacteria 2941523033 2941527053 540
117 iso_pu_bacteria 8006933436 8006939507 540
118 iso_pu_bacteria 8006973647 8006979257 540
119 iso_pu_bacteria 8019565922 8019575485 540
120 iso_pu_bacteria 2738541277 2738721495 541
121 iso_pu_bacteria 2738543019 2739281164 541
122 iso_pu_bacteria 2945972063 2945976698 541
123 3300006038 Ga0075365_10047828 Ga0075365_100478282 542
124 3300006186 Ga0075369_10001251 Ga0075369_100012518 542
125 3300050492 nmdc:mga0yw44_42307_c1 nmdc:mga0yw44_42307_c1_230_1933 542
126 3300050496 nmdc:mga07m45_4527_c1 nmdc:mga07m45_4527_c1_2851_4554 542
127 3300050516 nmdc:mga0sz30_6812_c1 nmdc:mga0sz30_6812_c1_1512_3215 542
128 iso_pu_bacteria 2599185214 2599624582 542
129 iso_pu_bacteria 2599185226 2599672556 542
130 iso_pu_bacteria 2599185227 2599683556 542
131 iso_pu_bacteria 2599185229 2599694165 542
132 iso_pu_bacteria 2818991446 2819595984 542
133 iso_pu_bacteria 2885198086 2885199089 542
134 iso_pu_bacteria 2885211737 2885212648 542
135 iso_pu_bacteria 2899924645 2899925334 542
136 iso_pu_bacteria 2928037797 2928038544 542
137 iso_pu_bacteria 2928044640 2928045851 542
138 iso_pu_bacteria 2928051484 2928053468 542
139 iso_pu_bacteria 2928064002 2928067073 542
140 iso_pu_bacteria 2928070936 2928071026 542
141 3300005364 Ga0070673_100023007 Ga0070673_1000230074 543
142 3300005456 Ga0070678_100071187 Ga0070678_1000711872 543
143 3300005548 Ga0070665_100099983 Ga0070665_1000999833 543
144 3300025933 Ga0207706_10026828 Ga0207706_100268282 543
145 3300025940 Ga0207691_10034036 Ga0207691_100340364 543
146 3300026121 Ga0207683_10027210 Ga0207683_100272102 543
147 3300053733 Ga0500552_000589 Ga0500552_000589_765_2510 543
148 3300005347 Ga0070668_100051477 Ga0070668_1000514772 544
149 3300005347 Ga0070668_100105334 Ga0070668_1001053342 544
150 3300005719 Ga0068861_100097758 Ga0068861_1000977582 544
151 3300005937 Ga0081455_10001489 Ga0081455_1000148918 544
152 3300006178 Ga0075367_10013776 Ga0075367_100137764 544
153 3300006353 Ga0075370_10062974 Ga0075370_100629741 544
154 3300013296 Ga0157374_10073631 Ga0157374_100736313 544
155 3300026075 Ga0207708_10019309 Ga0207708_100193092 544
156 3300026118 Ga0207675_100046440 Ga0207675_1000464404 544
157 3300028379 Ga0268266_10034533 Ga0268266_100345333 544
158 3300031507 Ga0307509_10049700 Ga0307509_100497003 544
159 3300031507 Ga0307509_10081542 Ga0307509_100815422 544
160 3300033180 Ga0307510_10008705 Ga0307510_100087053 544
161 3300033442 Ga0315911_1000002 Ga0315911_1000002182 544
162 3300039437 Ga0436365_1615563 Ga0436365_1615563_216_1955 544
163 3300046455 Ga0495603_0015584 Ga0495603_0015584_2514_4202 544
164 3300046459 Ga0495629_0118142 Ga0495629_0118142_109_1797 544
165 3300048908 Ga0496105_0014932 Ga0496105_0014932_272_1987 544
166 3300048909 Ga0496106_0018049 Ga0496106_0018049_2085_3773 544
167 3300048910 Ga0496107_0052078 Ga0496107_0052078_137_1852 544
168 3300048911 Ga0496108_0011490 Ga0496108_0011490_193_1908 544
169 3300048918 Ga0496115_0018701 Ga0496115_0018701_819_2534 544
170 3300048924 Ga0496121_0078655 Ga0496121_0078655_763_2451 544
171 3300048929 Ga0496126_0035490 Ga0496126_0035490_2028_3716 544
172 3300050496 nmdc:mga07m45_49070_c1 nmdc:mga07m45_49070_c1_298_1989 544
173 3300053088 Ga0500644_0001323 Ga0500644_0001323_296_1981 544
174 3300053096 Ga0500641_0002003 Ga0500641_0002003_3365_5053 544
175 3300053117 Ga0500593_000479 Ga0500593_000479_6018_7703 544
176 3300053178 Ga0500637_0007833 Ga0500637_0007833_355_2043 544
177 3300053730 Ga0500645_000430 Ga0500645_000430_7117_8805 544
178 3300053730 Ga0500645_000896 Ga0500645_000896_7315_9000 544
179 3300053730 Ga0500645_004068 Ga0500645_004068_3684_5369 544
180 iso_pu_bacteria 2831265667 2831266866 544
181 iso_pu_bacteria 2838054893 2838056926 544
182 3300025304 Ga0209257_1009440 Ga0209257_10094405 545
183 3300002773 JGI25152J39213_1002164 JGI25152J39213_10021644 546
184 3300002774 JGI25150J39212_1000330 JGI25150J39212_100033019 546
185 3300002987 JGI25159J45721_1002144 JGI25159J45721_10021444 546
186 3300003187 JGI25151J46595_10004180 JGI25151J46595_100041804 546
187 3300003215 JGI25153J46596_10004302 JGI25153J46596_100043024 546
188 3300003354 JGI25160J50197_1002998 JGI25160J50197_10029984 546
189 3300003374 JGI25161J50226_1001327 JGI25161J50226_10013273 546
190 3300003761 Ga0055535_1000612 Ga0055535_10006122 546
191 3300003762 Ga0055542_1000004 Ga0055542_1000004193 546
192 3300003771 Ga0055526_1005057 Ga0055526_10050574 546
193 3300003773 Ga0055537_1001828 Ga0055537_10018284 546
194 3300003775 Ga0055524_1003425 Ga0055524_10034254 546
195 3300003784 Ga0055534_1000568 Ga0055534_100056816 546
196 3300003790 Ga0055528_1003609 Ga0055528_10036094 546
197 3300004625 Ga0055543_1000587 Ga0055543_10005873 546
198 3300005262 Ga0065165_1001927 Ga0065165_100192717 546
199 3300013102 Ga0157371_10056813 Ga0157371_100568132 546
200 3300025208 Ga0209436_102351 Ga0209436_1023513 546
201 3300025228 Ga0209672_100468 Ga0209672_1004685 546
202 3300025229 Ga0209147_100609 Ga0209147_10060911 546
203 3300025242 Ga0209258_100022 Ga0209258_100022192 546
204 3300025245 Ga0207425_1000485 Ga0207425_100048522 546
205 3300025254 Ga0209148_1000034 Ga0209148_1000034192 546
206 3300025258 Ga0209129_1000023 Ga0209129_1000023270 546
207 3300025263 Ga0209565_1000304 Ga0209565_100030440 546
208 3300025273 Ga0209673_1000265 Ga0209673_100026540 546
209 3300025284 Ga0209130_1000113 Ga0209130_100011331 546
210 3300025291 Ga0209675_1000127 Ga0209675_100012740 546
211 3300025292 Ga0209676_1004021 Ga0209676_10040213 546
212 3300025294 Ga0209025_1000717 Ga0209025_10007179 546
213 3300025295 Ga0209564_1001115 Ga0209564_100111522 546
214 3300025297 Ga0209758_1000064 Ga0209758_1000064171 546
215 3300025299 Ga0209256_1000115 Ga0209256_1000115126 546
216 3300025302 Ga0207426_1000001 Ga0207426_10000011177 546
217 3300025304 Ga0209257_1002164 Ga0209257_100216418 546
218 3300025933 Ga0207706_10073567 Ga0207706_100735672 546
219 3300030521 Ga0307511_10000036 Ga0307511_1000003663 546
220 3300032004 Ga0307414_10012317 Ga0307414_100123172 546
221 3300046460 Ga0495638_0018614 Ga0495638_0018614_1458_3383 546
222 3300046513 Ga0495616_0001557 Ga0495616_0001557_2237_3949 546
223 3300046518 Ga0495631_0000653 Ga0495631_0000653_10108_12033 546
224 3300046530 Ga0495654_0023128 Ga0495654_0023128_927_2639 546
225 3300048925 Ga0496122_0055119 Ga0496122_0055119_737_2449 546
226 3300048928 Ga0496125_0098218 Ga0496125_0098218_221_1933 546
227 3300053090 Ga0500646_0002252 Ga0500646_0002252_332_2026 546
228 3300053092 Ga0500583_0009487 Ga0500583_0009487_1806_3500 546
229 3300053093 Ga0500651_0000493 Ga0500651_0000493_4497_6209 546
230 3300053093 Ga0500651_0082724 Ga0500651_0082724_206_1921 546
231 3300053110 Ga0500571_000249 Ga0500571_000249_8310_10022 546
232 3300053118 Ga0500594_0000229 Ga0500594_0000229_1589_3301 546
233 3300053133 Ga0500655_000300 Ga0500655_000300_6015_7727 546
234 3300053134 Ga0500658_0000461 Ga0500658_0000461_7431_9143 546
235 3300053134 Ga0500658_0000829 Ga0500658_0000829_9059_10771 546
236 3300053151 Ga0500604_0003526 Ga0500604_0003526_2329_4023 546
237 3300053153 Ga0500616_0049851 Ga0500616_0049851_206_1918 546
238 3300053161 Ga0500634_0013985 Ga0500634_0013985_747_2459 546
239 iso_pu_bacteria 2885192300 2885195101 546
240 iso_pu_bacteria 2928084124 2928085029 546
241 3300006042 Ga0075368_10005969 Ga0075368_100059695 547
242 3300050492 nmdc:mga0yw44_20609_c1 nmdc:mga0yw44_20609_c1_945_2642 547
243 3300050496 nmdc:mga07m45_10998_c1 nmdc:mga07m45_10998_c1_408_2105 547
244 3300002739 JGI25158J39367_1003203 JGI25158J39367_10032032 548
245 3300003354 JGI25160J50197_1005263 JGI25160J50197_10052632 548
246 3300003374 JGI25161J50226_1004599 JGI25161J50226_10045992 548
247 3300003771 Ga0055526_1004545 Ga0055526_10045454 548
248 3300003775 Ga0055524_1003418 Ga0055524_10034183 548
249 3300003781 Ga0055536_1003763 Ga0055536_10037633 548
250 3300003791 Ga0055530_10001436 Ga0055530_1000143614 548
251 3300003792 Ga0055540_1003431 Ga0055540_10034314 548
252 3300003794 Ga0055531_10004110 Ga0055531_100041104 548
253 3300004625 Ga0055543_1001936 Ga0055543_10019362 548
254 3300005539 Ga0068853_100021612 Ga0068853_1000216124 548
255 3300013104 Ga0157370_10102019 Ga0157370_101020193 548
256 3300025208 Ga0209436_107432 Ga0209436_1074321 548
257 3300025263 Ga0209565_1001331 Ga0209565_10013313 548
258 3300025273 Ga0209673_1002107 Ga0209673_100210713 548
259 3300025291 Ga0209675_1001278 Ga0209675_10012784 548
260 3300025292 Ga0209676_1000005 Ga0209676_1000005531 548
261 3300025295 Ga0209564_1000394 Ga0209564_100039414 548
262 3300025298 Ga0209050_1000007 Ga0209050_1000007566 548
263 3300025298 Ga0209050_1000471 Ga0209050_100047112 548
264 3300025299 Ga0209256_1002488 Ga0209256_100248813 548
265 3300025302 Ga0207426_1000031 Ga0207426_100003149 548
266 3300025303 Ga0209051_1000009 Ga0209051_1000009531 548
267 3300025304 Ga0209257_1000011 Ga0209257_1000011505 548
268 3300026041 Ga0207639_10003661 Ga0207639_100036614 548
269 3300048921 Ga0496118_0005285 Ga0496118_0005285_819_2555 548
270 3300048928 Ga0496125_0025427 Ga0496125_0025427_3275_5011 548
271 3300048925 Ga0496122_0005922 Ga0496122_0005922_1745_3445 549
272 3300048926 Ga0496123_0010937 Ga0496123_0010937_4841_6541 549
273 3300048926 Ga0496123_0055041 Ga0496123_0055041_702_2402 549
274 3300048928 Ga0496125_0000621 Ga0496125_0000621_34531_36231 549
275 3300048929 Ga0496126_0004505 Ga0496126_0004505_1252_2952 549
276 iso_pu_bacteria 2513237098 2513673649 550
277 iso_pu_bacteria 2513237141 2513888081 550
278 iso_pu_bacteria 2903768456 2903772125 550
279 3300031548 Ga0307408_100046714 Ga0307408_1000467142 551
280 3300031824 Ga0307413_10001173 Ga0307413_100011735 551
281 3300031852 Ga0307410_10013766 Ga0307410_100137661 551
282 3300031901 Ga0307406_10004113 Ga0307406_100041136 551
283 3300031911 Ga0307412_10006741 Ga0307412_100067412 551
284 3300031995 Ga0307409_100046025 Ga0307409_1000460251 551
285 3300032002 Ga0307416_100017421 Ga0307416_1000174212 551
286 3300032005 Ga0307411_10001216 Ga0307411_100012166 551
287 3300032126 Ga0307415_100002867 Ga0307415_1000028676 551
288 3300037471 Ga0395905_0031729 Ga0395905_0031729_2756_4471 553
289 iso_pu_bacteria 2643221609 2644061240 554
290 iso_pu_bacteria 2824653114 2824653625 554
291 iso_pu_bacteria 2858950400 2858955411 554
292 iso_pu_bacteria 2894023352 2894026840 554
293 iso_pu_bacteria 8002392321 8002393998 554
294 iso_pu_bacteria 8056681323 8056686212 554
295 3300031548 Ga0307408_100112745 Ga0307408_1001127452 555
296 3300005334 Ga0068869_100075011 Ga0068869_1000750111 556
297 3300005335 Ga0070666_10065387 Ga0070666_100653872 556
298 3300005338 Ga0068868_100014233 Ga0068868_1000142334 556
299 3300005347 Ga0070668_100016613 Ga0070668_1000166134 556
300 3300005354 Ga0070675_100001393 Ga0070675_10000139317 556
301 3300005355 Ga0070671_100044845 Ga0070671_1000448452 556
302 3300005356 Ga0070674_100000311 Ga0070674_10000031123 556
303 3300005364 Ga0070673_100126465 Ga0070673_1001264652 556
304 3300005367 Ga0070667_100089030 Ga0070667_1000890302 556
305 3300005456 Ga0070678_100001293 Ga0070678_1000012936 556
306 3300005539 Ga0068853_100085081 Ga0068853_1000850812 556
307 3300005543 Ga0070672_100010836 Ga0070672_1000108363 556
308 3300005548 Ga0070665_100063846 Ga0070665_1000638462 556
309 3300005616 Ga0068852_100017346 Ga0068852_1000173464 556
310 3300005618 Ga0068864_100007019 Ga0068864_1000070193 556
311 3300005719 Ga0068861_100116304 Ga0068861_1001163042 556
312 3300005840 Ga0068870_10003782 Ga0068870_100037826 556
313 3300005841 Ga0068863_100000767 Ga0068863_10000076723 556
314 3300005843 Ga0068860_100032149 Ga0068860_1000321494 556
315 3300006237 Ga0097621_100132580 Ga0097621_1001325802 556
316 3300006358 Ga0068871_100079252 Ga0068871_1000792522 556
317 3300006881 Ga0068865_100053087 Ga0068865_1000530872 556
318 3300013306 Ga0163162_10027923 Ga0163162_100279233 556
319 3300013308 Ga0157375_10001502 Ga0157375_1000150221 556
320 3300014969 Ga0157376_10008828 Ga0157376_100088287 556
321 3300025893 Ga0207682_10001188 Ga0207682_100011884 556
322 3300025903 Ga0207680_10020850 Ga0207680_100208504 556
323 3300025907 Ga0207645_10000629 Ga0207645_1000062914 556
324 3300025926 Ga0207659_10028503 Ga0207659_100285032 556
325 3300025931 Ga0207644_10011748 Ga0207644_100117483 556
326 3300025937 Ga0207669_10002151 Ga0207669_100021517 556
327 3300025938 Ga0207704_10057289 Ga0207704_100572892 556
328 3300025940 Ga0207691_10000463 Ga0207691_1000046324 556
329 3300025942 Ga0207689_10042931 Ga0207689_100429313 556
330 3300025972 Ga0207668_10047160 Ga0207668_100471602 556
331 3300025986 Ga0207658_10010956 Ga0207658_100109566 556
332 3300026095 Ga0207676_10004678 Ga0207676_100046789 556
333 3300026118 Ga0207675_100046276 Ga0207675_1000462762 556
334 3300026121 Ga0207683_10000265 Ga0207683_1000026532 556
335 3300028379 Ga0268266_10013722 Ga0268266_100137226 556
336 3300028381 Ga0268264_10078466 Ga0268264_100784662 556
337 3300025253 Ga0209677_100190 Ga0209677_10019018 557
338 3300048929 Ga0496126_0013937 Ga0496126_0013937_5218_6939 557
339 3300005548 Ga0070665_100121826 Ga0070665_1001218262 558
340 3300005618 Ga0068864_100043419 Ga0068864_1000434191 558
341 3300005841 Ga0068863_100022849 Ga0068863_1000228495 558
342 3300005841 Ga0068863_100058400 Ga0068863_1000584003 558
343 3300009098 Ga0105245_10002025 Ga0105245_100020254 558
344 3300025931 Ga0207644_10028782 Ga0207644_100287822 558
345 3300026095 Ga0207676_10018222 Ga0207676_100182222 558
346 3300002705 JGI25156J39149_1000358 JGI25156J39149_100035825 563
347 3300025256 Ga0209759_1000626 Ga0209759_10006267 563

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

373

529

0.98

PF18158

AidB_N

Adaptive response protein AidB N-terminal domain

98

251

0.98

PF02770

Acyl-CoA_dh_M

Acyl-CoA dehydrogenase, middle domain

265

364

0.88

PF08028

Acyl-CoA_dh_2

Acyl-CoA dehydrogenase, C-terminal domain

389

517

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
5ez3-assembly1.cif.gz_A crystal structure acyl-coa dehydrogenase from brucella melitensis in complex with fad 0.937 21 563
5ez3-assembly1.cif.gz_A crystal structure acyl-coa dehydrogenase from brucella melitensis in complex with fad 0.9336 21 563
3u33-assembly3.cif.gz_K crystal structure of the e. coli adaptive response protein aidb in the space group p3(2) 0.93 18 559
3u33-assembly3.cif.gz_K crystal structure of the e. coli adaptive response protein aidb in the space group p3(2) 0.9182 18 559
6sd8-assembly1.cif.gz_X bd2924 apo-form 0.8688 28 517
ID Description Score Start End Superfamily
af_I6X9J0_277_441_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9815 293 455 1.20.140.10
af_P33224_286_465_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9684 299 476 1.20.140.10
af_Q9XWZ2_321_475_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9649 297 447 1.20.140.10
af_I6X9J0_277_441_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.964 293 455 1.20.140.10
af_Q55BV1_307_473_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9557 297 451 1.20.140.10
ID Description Score Start End GO Terms
AF-A0A530GP43-F1-model_v4 DNA alkylation response protein 0.9859 292 457 GO:0003995
AF-A0A356PI46-F1-model_v4 deleted 0.98 265 508
AF-A0A3S2A4Q2-F1-model_v4 DNA alkylation response protein 0.9796 320 463 GO:0003995
AF-A0A6B3H2F2-F1-model_v4 DNA alkylation response protein 0.9753 283 512 GO:0003995
AF-A0A356PI46-F1-model_v4 deleted 0.9643 265 508

Feature Viewer

pLDDT pTM Quality
89.99 0.9 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map