F413577

General Info

Members Datasets Scaffolds Average Seq Length
338 249 676 360

Family's Representative Sequence

Representative Sequence 3300031730|Ga0307516_10010884|Ga0307516_100108847
Length 348
Sequence MALSTRTTDTLEAIALPVMAMAGALLLFGVFIWAGGKDPVEAWGLLFKGAFGDWFSWQNSLQRAAPLMLTALCVAIPARAGLVVIGGEGALVLGGLACAAVPYVFAPPENSFGTAILLLSAASAGGVWIALVGVLRQKRGVNETISSLLLAYTAIALFKHFVEGPMRDPASLNKPSTRTIAEGLRIGGIAGTDIHWGLVFGVVVCVVLGLWLFFTTSGFATRIVGGNARAALLVGLPSPRIIVVSCAIGGACAGLAGGIETGILVSFVARHNPWAVIPVAVLFGGFGAAGSLLQRRMDVPDASVMVLQGFAFLLILASEALRGRLFAARAPKPVVVPTPVATVIKANV

Samples

Sample ID Description Type Environment
1 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
2 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
3 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
4 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
5 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
6 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
7 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
8 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
9 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
10 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
11 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
12 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
13 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
14 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
15 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
16 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
17 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
18 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
19 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
20 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
21 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
22 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
23 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
24 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
25 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
26 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
27 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
28 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
29 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
30 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
31 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
32 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
33 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
34 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
35 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
36 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
37 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
38 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
39 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
40 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
41 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
42 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
43 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
44 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
45 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
46 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
47 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
48 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
60 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
61 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
62 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
63 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
64 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
65 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
66 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
67 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
68 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
71 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
73 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
74 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
75 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
76 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
78 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
79 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
80 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
82 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
83 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
117 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
118 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
119 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
120 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
121 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
122 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
123 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
124 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
125 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
126 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
127 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
128 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
129 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
130 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
131 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
132 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
133 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
134 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
135 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
136 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
137 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
138 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
139 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
140 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
141 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
142 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
143 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
144 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
145 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
146 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
147 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
148 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
149 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
150 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
151 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
152 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
153 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
154 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
155 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
156 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
157 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
158 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
159 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
160 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
161 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
162 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
163 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
164 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
165 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
166 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
167 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
168 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
169 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
170 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
171 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
172 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
173 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
174 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
175 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
176 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
177 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
178 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
179 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
180 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
181 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
182 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
183 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
184 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
185 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
186 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
187 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
188 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
189 3300053128 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 endosphere Metagenome Endosphere
190 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
191 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
192 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
193 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
194 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
195 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
196 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
197 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
198 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
199 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
200 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
201 2522572158 Azospirillum halopraeferens DSM 3675 Isolate Unclassified
202 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
203 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
204 2585428062 Methylibium sp. CF059 Isolate Rhizosphere
205 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
206 2599185214 Variovorax sp. NFACC26 Isolate Rhizoplane
207 2599185226 Variovorax sp. NFACC27 Isolate Rhizoplane
208 2599185227 Variovorax sp. NFACC28 Isolate Rhizoplane
209 2599185229 Variovorax sp. NFACC29 Isolate Endosphere
210 2643221592 Rhizobacter sp. Root16D2 Isolate Unclassified
211 2643221611 Acidovorax sp. Root219 Isolate Unclassified
212 2643221625 Rhizobacter sp. Root29 Isolate Unclassified
213 2643221628 Variovorax sp. Root318D1 Isolate Unclassified
214 2643221648 Rhizobacter sp. Root1238 Isolate Unclassified
215 2643221654 Rhizobacter sp. Root404 Isolate Unclassified
216 2643221658 Variovorax sp. Root411 Isolate Unclassified
217 2643221660 Methylibium sp. Root1272 Isolate Unclassified
218 2643221672 Variovorax sp. Root434 Isolate Unclassified
219 2738541277 Variovorax sp. GV051 Isolate Unclassified
220 2738541307 Variovorax sp. GV008 Isolate Unclassified
221 2738543013 Variovorax sp. BT01 Isolate Unclassified
222 2738543019 Variovorax sp. GV040 Isolate Unclassified
223 2818991446 Variovorax sp. 1180 Isolate Unclassified
224 2831265667 Variovorax guangxiensis DSM 27352 Isolate Rhizosphere
225 2838054893 Variovorax guangxiensis 34/80 Isolate Nodule
226 2842677519 Variovorax sp. R-72495 Isolate Unclassified
227 2842733646 Variovorax sp. R-72446 Isolate Unclassified
228 2842747753 Variovorax sp. R-72060 Isolate Unclassified
229 2885192300 Variovorax sp. MHTC-1 Isolate Rhizosphere
230 2885198086 Variovorax sp. 679 Isolate Unclassified
231 2885211737 Variovorax sp. 553 Isolate Unclassified
232 2899924645 Variovorax sp. 369 Isolate Unclassified
233 2904449895 Variovorax sp. 1763 Isolate Rhizosphere
234 2904456579 Variovorax sp. 2002 Isolate Unclassified
235 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
236 2919462493 Variovorax sp. 3319 Isolate Rhizosphere
237 2928037797 Variovorax sp. 1126 Isolate Unclassified
238 2928044640 Variovorax sp. 1128 Isolate Unclassified
239 2928051484 Variovorax sp. 1133 Isolate Unclassified
240 2928064002 Variovorax sp. 1140 Isolate Rhizosphere
241 2928070936 Variovorax gossypii 1167 Isolate Unclassified
242 2928084124 Variovorax paradoxus 1218 Isolate Unclassified
243 2928115317 Pseudacidovorax sp. 1753 Isolate Rhizosphere
244 2929160207 Variovorax sp. R-72349 Hybrid assembly Isolate Unclassified
245 2929520902 Variovorax beijingensis 502 Isolate Unclassified
246 2945909444 Variovorax sp. CRF3-Va-1 W1I1 Isolate Rhizosphere
247 2945945610 Variovorax paradoxus W1I18 Isolate Rhizosphere
248 2945972063 Variovorax paradoxus W2I8 Isolate Rhizosphere
249 2945984333 Variovorax sp. W2I14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.21
Metatranscriptomes 0.3
Isolates 14.5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 26.63
Nodule 0.3
Rhizoplane 2.66
Rhizosphere 51.78
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307516_10010884 3300031730 Bacteria 9951
2 JGI25158J39367_1002143 3300002739 Bacteria 3301
3 JGI25152J39213_1011274 3300002773 Bacteria 1986
4 JGI25150J39212_1008996 3300002774 Bacteria 1925
5 JGI25159J45721_1012522 3300002987 Bacteria 2019
6 JGI25151J46595_10013245 3300003187 Bacteria 3719
7 JGI25151J46595_10036472 3300003187 Bacteria 1854
8 JGI25153J46596_10006216 3300003215 Bacteria 6112
9 JGI25153J46596_10027589 3300003215 Bacteria 1986
10 rootH1_10001143 3300003316 Bacteria 2717
11 JGI25161J50226_1003670 3300003374 Bacteria 3437
12 Ga0006562J51391_1045234 3300003578 Bacteria 1640
13 Ga0055535_1000260 3300003761 Bacteria 55578
14 Ga0055542_1000013 3300003762 Bacteria 387560
15 Ga0055526_1023860 3300003771 Bacteria 2025
16 Ga0055537_1010275 3300003773 Bacteria 1986
17 Ga0055524_1000052 3300003775 Bacteria 144959
18 Ga0055524_1022984 3300003775 Bacteria 2019
19 Ga0055536_1003979 3300003781 Bacteria 7733
20 Ga0055528_1022182 3300003790 Bacteria 1986
21 Ga0055530_10005576 3300003791 Bacteria 5929
22 Ga0055540_1004131 3300003792 Bacteria 6711
23 Ga0055531_10006350 3300003794 Bacteria 6726
24 Ga0055543_1007768 3300004625 Bacteria 2446
25 Ga0065165_1008594 3300005262 Bacteria 4744
26 Ga0070676_10039396 3300005328 Bacteria 2733
27 Ga0070670_100125269 3300005331 Bacteria 2218
28 Ga0070670_100132443 3300005331 Bacteria 2153
29 Ga0068868_100123432 3300005338 Bacteria 2114
30 Ga0070660_100022483 3300005339 Bacteria 4663
31 Ga0070668_100047337 3300005347 Bacteria 3306
32 Ga0070669_100021928 3300005353 Bacteria 4567
33 Ga0070675_100000096 3300005354 Bacteria 50781
34 Ga0070675_100011569 3300005354 Bacteria 6911
35 Ga0070675_100020292 3300005354 Bacteria 5303
36 Ga0070675_100026305 3300005354 Bacteria 4670
37 Ga0070671_100011750 3300005355 Bacteria 7042
38 Ga0070671_100013572 3300005355 Bacteria 6569
39 Ga0070671_100028513 3300005355 Bacteria 4597
40 Ga0070671_100199510 3300005355 Bacteria 1696
41 Ga0070674_100145496 3300005356 Bacteria 1783
42 Ga0070674_100148713 3300005356 Bacteria 1765
43 Ga0070673_100018706 3300005364 Bacteria 4957
44 Ga0070673_100020217 3300005364 Bacteria 4798
45 Ga0070678_100006111 3300005456 Bacteria 7030
46 Ga0070678_100035148 3300005456 Bacteria 3496
47 Ga0068867_100001043 3300005459 Bacteria 18890
48 Ga0068867_100016671 3300005459 Bacteria 5218
49 Ga0068867_100095290 3300005459 Bacteria 2264
50 Ga0070706_100071069 3300005467 Bacteria 3219
51 Ga0070707_100129571 3300005468 Bacteria 2452
52 Ga0070698_100050145 3300005471 Bacteria 4257
53 Ga0070679_100001939 3300005530 Bacteria 18580
54 Ga0068853_100035463 3300005539 Bacteria 4237
55 Ga0068853_100127519 3300005539 Bacteria 2275
56 Ga0070672_100000072 3300005543 Bacteria 46329
57 Ga0070672_100017376 3300005543 Bacteria 5175
58 Ga0070686_100222544 3300005544 Bacteria 1365
59 Ga0070665_100433541 3300005548 Bacteria 1323
60 Ga0068855_100023121 3300005563 Bacteria 7448
61 Ga0068857_100036288 3300005577 Bacteria 4368
62 Ga0068857_100146739 3300005577 Bacteria 2135
63 Ga0068851_10015261 3300005834 Bacteria 3658
64 Ga0075366_10030279 3300006195 Bacteria 3181
65 Ga0075366_10090118 3300006195 Bacteria 1836
66 Ga0075366_10122644 3300006195 Bacteria 1566
67 Ga0075370_10018377 3300006353 Bacteria 3794
68 Ga0075370_10052177 3300006353 Bacteria 2319
69 Ga0068871_100124892 3300006358 Bacteria 2177
70 Ga0105240_10003161 3300009093 Bacteria 25902
71 Ga0105240_10013108 3300009093 Bacteria 11408
72 Ga0105240_10311809 3300009093 Bacteria 1796
73 Ga0105243_10000765 3300009148 Bacteria 30835
74 Ga0105237_10002139 3300009545 Bacteria 24880
75 Ga0105239_10001543 3300010375 Bacteria 30425
76 Ga0157373_10053091 3300013100 Bacteria 2882
77 Ga0157370_10037776 3300013104 Bacteria 4676
78 Ga0157374_10012796 3300013296 Bacteria 7308
79 Ga0157378_10419822 3300013297 Bacteria 1322
80 Ga0157372_10171347 3300013307 Bacteria 2511
81 Ga0157375_10334649 3300013308 Bacteria 1679
82 Ga0163163_10330313 3300014325 Bacteria 1579
83 Ga0163163_10558541 3300014325 Bacteria 1207
84 Ga0157380_10218762 3300014326 Bacteria 1703
85 Ga0182008_10092621 3300014497 Bacteria 1491
86 Ga0182008_10122245 3300014497 Bacteria 1294
87 Ga0157377_10000016 3300014745 Bacteria 190613
88 Ga0157379_10153648 3300014968 Bacteria 2076
89 Ga0157376_10049927 3300014969 Bacteria 3468
90 Ga0182006_1024419 3300015261 Bacteria 2493
91 Ga0183362_10004 3300015683 Bacteria 569303
92 Ga0163161_10000561 3300017792 Bacteria 29982
93 Ga0163161_10042731 3300017792 Bacteria 3261
94 Ga0209147_100843 3300025229 Bacteria 14406
95 Ga0209258_100020 3300025242 Bacteria 565241
96 Ga0207425_1000814 3300025245 Bacteria 15617
97 Ga0209148_1000031 3300025254 Bacteria 564601
98 Ga0209129_1000055 3300025258 Bacteria 261708
99 Ga0209673_1012794 3300025273 Bacteria 3355
100 Ga0209130_1000807 3300025284 Bacteria 26513
101 Ga0209675_1000862 3300025291 Bacteria 19667
102 Ga0209675_1004061 3300025291 Bacteria 6668
103 Ga0209675_1005830 3300025291 Bacteria 5062
104 Ga0209675_1008358 3300025291 Bacteria 3818
105 Ga0209676_1004922 3300025292 Bacteria 7189
106 Ga0209025_1000409 3300025294 Bacteria 86577
107 Ga0209025_1004351 3300025294 Bacteria 12359
108 Ga0209564_1000157 3300025295 Bacteria 164758
109 Ga0209758_1000042 3300025297 Bacteria 407145
110 Ga0209758_1000358 3300025297 Bacteria 81693
111 Ga0209758_1013362 3300025297 Bacteria 4484
112 Ga0209050_1000873 3300025298 Bacteria 40656
113 Ga0209050_1004891 3300025298 Bacteria 8772
114 Ga0209050_1006191 3300025298 Bacteria 7189
115 Ga0209050_1026998 3300025298 Bacteria 1906
116 Ga0209256_1000036 3300025299 Bacteria 386664
117 Ga0209256_1000124 3300025299 Bacteria 165390
118 Ga0207426_1000055 3300025302 Bacteria 374450
119 Ga0209051_1003834 3300025303 Bacteria 9628
120 Ga0209051_1034122 3300025303 Bacteria 1912
121 Ga0209257_1001377 3300025304 Bacteria 29185
122 Ga0209257_1025749 3300025304 Bacteria 2001
123 Ga0207655_1005080 3300025728 Bacteria 9094
124 Ga0207682_10002034 3300025893 Bacteria 9148
125 Ga0207645_10009121 3300025907 Bacteria 6880
126 Ga0207645_10099356 3300025907 Bacteria 1876
127 Ga0207643_10005176 3300025908 Bacteria 6974
128 Ga0207684_10016844 3300025910 Bacteria 6276
129 Ga0207695_10097449 3300025913 Bacteria 2942
130 Ga0207671_10008796 3300025914 Bacteria 8504
131 Ga0207657_10022273 3300025919 Bacteria 5935
132 Ga0207652_10040910 3300025921 Bacteria 3938
133 Ga0207681_10014343 3300025923 Bacteria 4923
134 Ga0207694_10014153 3300025924 Bacteria 6015
135 Ga0207650_10001087 3300025925 Bacteria 20115
136 Ga0207650_10007951 3300025925 Bacteria 7229
137 Ga0207659_10000153 3300025926 Bacteria 41045
138 Ga0207659_10012269 3300025926 Bacteria 5444
139 Ga0207659_10049969 3300025926 Bacteria 2969
140 Ga0207687_10019467 3300025927 Bacteria 4497
141 Ga0207644_10012220 3300025931 Bacteria 5699
142 Ga0207644_10098462 3300025931 Bacteria 2192
143 Ga0207706_10107199 3300025933 Bacteria 2458
144 Ga0207709_10000405 3300025935 Bacteria 42204
145 Ga0207709_10000602 3300025935 Bacteria 29841
146 Ga0207709_10008073 3300025935 Bacteria 5829
147 Ga0207704_10264726 3300025938 Bacteria 1298
148 Ga0207691_10002790 3300025940 Bacteria 17030
149 Ga0207691_10098213 3300025940 Bacteria 2616
150 Ga0207689_10248281 3300025942 Bacteria 1472
151 Ga0207679_10170235 3300025945 Bacteria 1792
152 Ga0207667_10206612 3300025949 Bacteria 2013
153 Ga0207651_10007699 3300025960 Bacteria 5756
154 Ga0207651_10024141 3300025960 Bacteria 3755
155 Ga0207677_10031497 3300026023 Bacteria 3397
156 Ga0207677_10094073 3300026023 Bacteria 2187
157 Ga0207639_10046690 3300026041 Bacteria 3269
158 Ga0207639_10105463 3300026041 Bacteria 2287
159 Ga0207641_10304969 3300026088 Bacteria 1505
160 Ga0207648_10000515 3300026089 Bacteria 43207
161 Ga0207648_10016905 3300026089 Bacteria 6649
162 Ga0207648_10025230 3300026089 Bacteria 5297
163 Ga0207648_10146176 3300026089 Bacteria 2085
164 Ga0207676_10012019 3300026095 Bacteria 6195
165 Ga0207676_10043715 3300026095 Bacteria 3451
166 Ga0207674_10023183 3300026116 Bacteria 6653
167 Ga0207674_10073045 3300026116 Bacteria 3444
168 Ga0207675_100000925 3300026118 Bacteria 29296
169 Ga0207675_100420182 3300026118 Bacteria 1320
170 Ga0207683_10032937 3300026121 Bacteria 4502
171 Ga0265337_1012634 3300028556 Bacteria 2863
172 Ga0307515_10000006 3300028794 Bacteria 725810
173 Ga0307515_10000067 3300028794 Bacteria 242978
174 Ga0307515_10000138 3300028794 Bacteria 173220
175 Ga0307515_10001193 3300028794 Bacteria 59425
176 Ga0307515_10002234 3300028794 Bacteria 42472
177 Ga0307515_10023840 3300028794 Bacteria 10697
178 Ga0307515_10036913 3300028794 Bacteria 7881
179 Ga0307515_10278931 3300028794 Bacteria 1381
180 Ga0265324_10000045 3300029957 Bacteria 107095
181 Ga0307512_10021683 3300030522 Bacteria 5786
182 Ga0307512_10109229 3300030522 Bacteria 1831
183 Ga0265325_10014544 3300031241 Bacteria 4443
184 Ga0265339_10000001 3300031249 Bacteria 613713
185 Ga0265327_10000174 3300031251 Bacteria 138922
186 Ga0307513_10000013 3300031456 Bacteria 325682
187 Ga0307513_10000246 3300031456 Bacteria 78455
188 Ga0307513_10003088 3300031456 Bacteria 22728
189 Ga0307513_10029152 3300031456 Bacteria 6296
190 Ga0307513_10078234 3300031456 Bacteria 3421
191 Ga0307509_10177925 3300031507 Bacteria 1997
192 Ga0307509_10262793 3300031507 Bacteria 1500
193 Ga0307408_100055958 3300031548 Bacteria 2859
194 Ga0307508_10000509 3300031616 Bacteria 46521
195 Ga0307514_10001030 3300031649 Bacteria 40201
196 Ga0307514_10004889 3300031649 Bacteria 12181
197 Ga0307514_10091563 3300031649 Bacteria 2214
198 Ga0307516_10001048 3300031730 Bacteria 38456
199 Ga0307516_10008482 3300031730 Bacteria 11617
200 Ga0307405_10253914 3300031731 Bacteria 1310
201 Ga0307406_10054021 3300031901 Bacteria 2562
202 Ga0307412_10024165 3300031911 Bacteria 3748
203 Ga0307411_10043781 3300032005 Bacteria 2866
204 Ga0307510_10006596 3300033180 Bacteria 13844
205 Ga0307510_10026478 3300033180 Bacteria 6663
206 Ga0373931_0030717 3300035691 Bacteria 2768
207 Ga0373937_0256433 3300036401 Bacteria 1649
208 Ga0395905_0000414 3300037471 Bacteria 59892
209 Ga0395905_0037892 3300037471 Bacteria 4524
210 Ga0439436_0002692 3300041404 Bacteria 5362
211 Ga0439439_0004435 3300041406 Bacteria 3165
212 Ga0439466_0021244 3300041411 Bacteria 2304
213 Ga0439465_0001168 3300041413 Bacteria 8435
214 Ga0451793_0409663 3300041452 Bacteria 1656
215 Ga0451841_1037808 3300041498 Bacteria 1517
216 Ga0439431_0010612 3300041997 Bacteria 2092
217 Ga0439433_0000655 3300041999 Bacteria 6632
218 Ga0439442_010499 3300042002 Bacteria 1878
219 Ga0439445_0002996 3300042004 Bacteria 3779
220 Ga0439432_017897 3300042006 Bacteria 2375
221 Ga0439449_0003795 3300042007 Bacteria 5846
222 Ga0439457_006783 3300042014 Bacteria 2778
223 Ga0439462_0008943 3300042015 Bacteria 2533
224 Ga0450893_0002172 3300042532 Bacteria 3059
225 Ga0451577_0009811 3300042876 Bacteria 9175
226 Ga0466969_0057301 3300044656 Bacteria 1899
227 Ga0466961_0015343 3300044693 Bacteria 4919
228 Ga0466959_0106984 3300045049 Bacteria 1999
229 Ga0495627_004426 3300046453 Bacteria 5881
230 Ga0495627_025619 3300046453 Bacteria 1911
231 Ga0495592_0001645 3300046454 Bacteria 15657
232 Ga0495638_0056764 3300046460 Bacteria 2429
233 Ga0495638_0131795 3300046460 Bacteria 1467
234 Ga0495607_0143400 3300046501 Bacteria 1230
235 Ga0495610_0048367 3300046512 Bacteria 2088
236 Ga0495620_0040629 3300046515 Bacteria 2045
237 Ga0495632_0003426 3300046519 Bacteria 11271
238 Ga0495632_0069932 3300046519 Bacteria 1689
239 Ga0495637_0004930 3300046520 Bacteria 6874
240 Ga0495637_0005420 3300046520 Bacteria 6507
241 Ga0495643_0029406 3300046522 Bacteria 3074
242 Ga0495654_0003859 3300046530 Bacteria 9053
243 Ga0495668_0122299 3300046616 Bacteria 1424
244 Ga0495625_0035241 3300046660 Bacteria 3690
245 Ga0495625_0106506 3300046660 Bacteria 1919
246 Ga0495686_0048395 3300047472 Bacteria 2681
247 Ga0496102_0008522 3300048905 Bacteria 8791
248 Ga0496102_0278315 3300048905 Bacteria 1577
249 Ga0496108_0097346 3300048911 Bacteria 2507
250 Ga0496110_0021888 3300048913 Bacteria 5421
251 Ga0496114_0046831 3300048917 Bacteria 3594
252 Ga0496121_0013352 3300048924 Bacteria 8835
253 Ga0496122_0167617 3300048925 Bacteria 1329
254 Ga0496123_0000124 3300048926 Bacteria 158327
255 Ga0496123_0103414 3300048926 Bacteria 1650
256 Ga0496123_0133250 3300048926 Bacteria 1372
257 nmdc:mga03n38_88081_c1 3300050490 Bacteria 1472
258 nmdc:mga07m45_59064_c1 3300050496 Bacteria 2170
259 nmdc:mga07m45_62472_c1 3300050496 Bacteria 2111
260 Ga0500610_0012572 3300053079 Bacteria 3904
261 Ga0500610_0015790 3300053079 Bacteria 3584
262 Ga0500635_0030724 3300053080 Bacteria 1734
263 Ga0500578_0000712 3300053086 Bacteria 39576
264 Ga0500644_0045369 3300053088 Bacteria 1480
265 Ga0500651_0019352 3300053093 Bacteria 4229
266 Ga0500650_0065242 3300053098 Bacteria 1701
267 Ga0500555_016076 3300053103 Bacteria 2157
268 Ga0500562_012060 3300053108 Bacteria 2195
269 Ga0500593_000692 3300053117 Bacteria 12817
270 Ga0500593_003906 3300053117 Bacteria 5718
271 Ga0500594_0001115 3300053118 Bacteria 5765
272 Ga0500607_009937 3300053121 Bacteria 5702
273 Ga0500608_001941 3300053122 Bacteria 7392
274 Ga0500626_052233 3300053128 Bacteria 1837
275 Ga0500628_006703 3300053129 Bacteria 1954
276 Ga0500652_000267 3300053131 Bacteria 19472
277 Ga0500559_0000047 3300053136 Bacteria 95447
278 Ga0500559_0017084 3300053136 Bacteria 3065
279 Ga0500586_061560 3300053145 Bacteria 1306
280 Ga0500619_026033 3300053154 Bacteria 1738
281 Ga0500619_029140 3300053154 Bacteria 1668
282 Ga0500622_0000147 3300053156 Bacteria 74375
283 Ga0500622_0028256 3300053156 Bacteria 2952
284 Ga0500627_0063845 3300053158 Bacteria 1623
285 Ga0500634_0066787 3300053161 Bacteria 1893
286 Ga0500636_0077373 3300053177 Bacteria 1922
287 Ga0500587_004170 3300053739 Bacteria 1996
288 Ga0500587_005593 3300053739 Bacteria 1684
289 Ga0500661_002074 3300055283 Bacteria 3790
290 2523103737 2522572158 Bacteria 6514390
291 2587725203 2585428057 Bacteria 6737412
292 2587731439 2585428058 Bacteria 6853932
293 2587759464 2585428062 Bacteria 6842168
294 2588294137 2588253510 Bacteria 6901809
295 2599622441 2599185214 Bacteria 8209958
296 2599674467 2599185226 Bacteria 8233575
297 2599680152 2599185227 Bacteria 8246414
298 2599692168 2599185229 Bacteria 8216126
299 2643972911 2643221592 Bacteria 6608788
300 2644073904 2643221611 Bacteria 6820941
301 2644139730 2643221625 Bacteria 6512927
302 2644160852 2643221628 Bacteria 5745828
303 2644274515 2643221648 Bacteria 6521465
304 2644305744 2643221654 Bacteria 5273570
305 2644326557 2643221658 Bacteria 6064537
306 2644341162 2643221660 Bacteria 4208257
307 2644396901 2643221672 Bacteria 6322190
308 2738719310 2738541277 Bacteria 7458140
309 2738883344 2738541307 Bacteria 8606193
310 2739247370 2738543013 Bacteria 5618633
311 2739282959 2738543019 Bacteria 7459457
312 2819599141 2818991446 Bacteria 7757362
313 2831270920 2831265667 Bacteria 7184833
314 2838058967 2838054893 Bacteria 7451788
315 2842679283 2842677519 Bacteria 5615038
316 2842738285 2842733646 Bacteria 5716726
317 2842750718 2842747753 Bacteria 5578255
318 2885193971 2885192300 Bacteria 5882526
319 2885202261 2885198086 Bacteria 7212419
320 2885215914 2885211737 Bacteria 7212420
321 2899929965 2899924645 Bacteria 7487985
322 2904451621 2904449895 Bacteria 6927402
323 2904461890 2904456579 Bacteria 6819253
324 2904543300 2904541872 Bacteria 8915136
325 2919464485 2919462493 Bacteria 5817112
326 2928043500 2928037797 Bacteria 7273642
327 2928049870 2928044640 Bacteria 7271509
328 2928054445 2928051484 Bacteria 7773759
329 2928070031 2928064002 Bacteria 7419480
330 2928074350 2928070936 Bacteria 8062541
331 2928086588 2928084124 Bacteria 7159212
332 2928118849 2928115317 Bacteria 6477646
333 2929160532 2929160207 Bacteria 9075316
334 2929526540 2929520902 Bacteria 6765052
335 2945915522 2945909444 Bacteria 7065066
336 2945950457 2945945610 Bacteria 5951079
337 2945974900 2945972063 Bacteria 6086495
338 2945989080 2945984333 Bacteria 7358892
339 Ga0307516_10010884
340 JGI25158J39367_1002143
341 JGI25152J39213_1011274
342 JGI25150J39212_1008996
343 JGI25159J45721_1012522
344 JGI25151J46595_10013245
345 JGI25151J46595_10036472
346 JGI25153J46596_10006216
347 JGI25153J46596_10027589
348 rootH1_10001143
349 JGI25161J50226_1003670
350 Ga0006562J51391_1045234
351 Ga0055535_1000260
352 Ga0055542_1000013
353 Ga0055526_1023860
354 Ga0055537_1010275
355 Ga0055524_1000052
356 Ga0055524_1022984
357 Ga0055536_1003979
358 Ga0055528_1022182
359 Ga0055530_10005576
360 Ga0055540_1004131
361 Ga0055531_10006350
362 Ga0055543_1007768
363 Ga0065165_1008594
364 Ga0070676_10039396
365 Ga0070670_100125269
366 Ga0070670_100132443
367 Ga0068868_100123432
368 Ga0070660_100022483
369 Ga0070668_100047337
370 Ga0070669_100021928
371 Ga0070675_100000096
372 Ga0070675_100011569
373 Ga0070675_100020292
374 Ga0070675_100026305
375 Ga0070671_100011750
376 Ga0070671_100013572
377 Ga0070671_100028513
378 Ga0070671_100199510
379 Ga0070674_100145496
380 Ga0070674_100148713
381 Ga0070673_100018706
382 Ga0070673_100020217
383 Ga0070678_100006111
384 Ga0070678_100035148
385 Ga0068867_100001043
386 Ga0068867_100016671
387 Ga0068867_100095290
388 Ga0070706_100071069
389 Ga0070707_100129571
390 Ga0070698_100050145
391 Ga0070679_100001939
392 Ga0068853_100035463
393 Ga0068853_100127519
394 Ga0070672_100000072
395 Ga0070672_100017376
396 Ga0070686_100222544
397 Ga0070665_100433541
398 Ga0068855_100023121
399 Ga0068857_100036288
400 Ga0068857_100146739
401 Ga0068851_10015261
402 Ga0075366_10030279
403 Ga0075366_10090118
404 Ga0075366_10122644
405 Ga0075370_10018377
406 Ga0075370_10052177
407 Ga0068871_100124892
408 Ga0105240_10003161
409 Ga0105240_10013108
410 Ga0105240_10311809
411 Ga0105243_10000765
412 Ga0105237_10002139
413 Ga0105239_10001543
414 Ga0157373_10053091
415 Ga0157370_10037776
416 Ga0157374_10012796
417 Ga0157378_10419822
418 Ga0157372_10171347
419 Ga0157375_10334649
420 Ga0163163_10330313
421 Ga0163163_10558541
422 Ga0157380_10218762
423 Ga0182008_10092621
424 Ga0182008_10122245
425 Ga0157377_10000016
426 Ga0157379_10153648
427 Ga0157376_10049927
428 Ga0182006_1024419
429 Ga0183362_10004
430 Ga0163161_10000561
431 Ga0163161_10042731
432 Ga0209147_100843
433 Ga0209258_100020
434 Ga0207425_1000814
435 Ga0209148_1000031
436 Ga0209129_1000055
437 Ga0209673_1012794
438 Ga0209130_1000807
439 Ga0209675_1000862
440 Ga0209675_1004061
441 Ga0209675_1005830
442 Ga0209675_1008358
443 Ga0209676_1004922
444 Ga0209025_1000409
445 Ga0209025_1004351
446 Ga0209564_1000157
447 Ga0209758_1000042
448 Ga0209758_1000358
449 Ga0209758_1013362
450 Ga0209050_1000873
451 Ga0209050_1004891
452 Ga0209050_1006191
453 Ga0209050_1026998
454 Ga0209256_1000036
455 Ga0209256_1000124
456 Ga0207426_1000055
457 Ga0209051_1003834
458 Ga0209051_1034122
459 Ga0209257_1001377
460 Ga0209257_1025749
461 Ga0207655_1005080
462 Ga0207682_10002034
463 Ga0207645_10009121
464 Ga0207645_10099356
465 Ga0207643_10005176
466 Ga0207684_10016844
467 Ga0207695_10097449
468 Ga0207671_10008796
469 Ga0207657_10022273
470 Ga0207652_10040910
471 Ga0207681_10014343
472 Ga0207694_10014153
473 Ga0207650_10001087
474 Ga0207650_10007951
475 Ga0207659_10000153
476 Ga0207659_10012269
477 Ga0207659_10049969
478 Ga0207687_10019467
479 Ga0207644_10012220
480 Ga0207644_10098462
481 Ga0207706_10107199
482 Ga0207709_10000405
483 Ga0207709_10000602
484 Ga0207709_10008073
485 Ga0207704_10264726
486 Ga0207691_10002790
487 Ga0207691_10098213
488 Ga0207689_10248281
489 Ga0207679_10170235
490 Ga0207667_10206612
491 Ga0207651_10007699
492 Ga0207651_10024141
493 Ga0207677_10031497
494 Ga0207677_10094073
495 Ga0207639_10046690
496 Ga0207639_10105463
497 Ga0207641_10304969
498 Ga0207648_10000515
499 Ga0207648_10016905
500 Ga0207648_10025230
501 Ga0207648_10146176
502 Ga0207676_10012019
503 Ga0207676_10043715
504 Ga0207674_10023183
505 Ga0207674_10073045
506 Ga0207675_100000925
507 Ga0207675_100420182
508 Ga0207683_10032937
509 Ga0265337_1012634
510 Ga0307515_10000006
511 Ga0307515_10000067
512 Ga0307515_10000138
513 Ga0307515_10001193
514 Ga0307515_10002234
515 Ga0307515_10023840
516 Ga0307515_10036913
517 Ga0307515_10278931
518 Ga0265324_10000045
519 Ga0307512_10021683
520 Ga0307512_10109229
521 Ga0265325_10014544
522 Ga0265339_10000001
523 Ga0265327_10000174
524 Ga0307513_10000013
525 Ga0307513_10000246
526 Ga0307513_10003088
527 Ga0307513_10029152
528 Ga0307513_10078234
529 Ga0307509_10177925
530 Ga0307509_10262793
531 Ga0307408_100055958
532 Ga0307508_10000509
533 Ga0307514_10001030
534 Ga0307514_10004889
535 Ga0307514_10091563
536 Ga0307516_10001048
537 Ga0307516_10008482
538 Ga0307405_10253914
539 Ga0307406_10054021
540 Ga0307412_10024165
541 Ga0307411_10043781
542 Ga0307510_10006596
543 Ga0307510_10026478
544 Ga0373931_0030717
545 Ga0373937_0256433
546 Ga0395905_0000414
547 Ga0395905_0037892
548 Ga0439436_0002692
549 Ga0439439_0004435
550 Ga0439466_0021244
551 Ga0439465_0001168
552 Ga0451793_0409663
553 Ga0451841_1037808
554 Ga0439431_0010612
555 Ga0439433_0000655
556 Ga0439442_010499
557 Ga0439445_0002996
558 Ga0439432_017897
559 Ga0439449_0003795
560 Ga0439457_006783
561 Ga0439462_0008943
562 Ga0450893_0002172
563 Ga0451577_0009811
564 Ga0466969_0057301
565 Ga0466961_0015343
566 Ga0466959_0106984
567 Ga0495627_004426
568 Ga0495627_025619
569 Ga0495592_0001645
570 Ga0495638_0056764
571 Ga0495638_0131795
572 Ga0495607_0143400
573 Ga0495610_0048367
574 Ga0495620_0040629
575 Ga0495632_0003426
576 Ga0495632_0069932
577 Ga0495637_0004930
578 Ga0495637_0005420
579 Ga0495643_0029406
580 Ga0495654_0003859
581 Ga0495668_0122299
582 Ga0495625_0035241
583 Ga0495625_0106506
584 Ga0495686_0048395
585 Ga0496102_0008522
586 Ga0496102_0278315
587 Ga0496108_0097346
588 Ga0496110_0021888
589 Ga0496114_0046831
590 Ga0496121_0013352
591 Ga0496122_0167617
592 Ga0496123_0000124
593 Ga0496123_0103414
594 Ga0496123_0133250
595 nmdc:mga03n38_88081_c1
596 nmdc:mga07m45_59064_c1
597 nmdc:mga07m45_62472_c1
598 Ga0500610_0012572
599 Ga0500610_0015790
600 Ga0500635_0030724
601 Ga0500578_0000712
602 Ga0500644_0045369
603 Ga0500651_0019352
604 Ga0500650_0065242
605 Ga0500555_016076
606 Ga0500562_012060
607 Ga0500593_000692
608 Ga0500593_003906
609 Ga0500594_0001115
610 Ga0500607_009937
611 Ga0500608_001941
612 Ga0500626_052233
613 Ga0500628_006703
614 Ga0500652_000267
615 Ga0500559_0000047
616 Ga0500559_0017084
617 Ga0500586_061560
618 Ga0500619_026033
619 Ga0500619_029140
620 Ga0500622_0000147
621 Ga0500622_0028256
622 Ga0500627_0063845
623 Ga0500634_0066787
624 Ga0500636_0077373
625 Ga0500587_004170
626 Ga0500587_005593
627 Ga0500661_002074
628 2523103737
629 2587725203
630 2587731439
631 2587759464
632 2588294137
633 2599622441
634 2599674467
635 2599680152
636 2599692168
637 2643972911
638 2644073904
639 2644139730
640 2644160852
641 2644274515
642 2644305744
643 2644326557
644 2644341162
645 2644396901
646 2738719310
647 2738883344
648 2739247370
649 2739282959
650 2819599141
651 2831270920
652 2838058967
653 2842679283
654 2842738285
655 2842750718
656 2885193971
657 2885202261
658 2885215914
659 2899929965
660 2904451621
661 2904461890
662 2904543300
663 2919464485
664 2928043500
665 2928049870
666 2928054445
667 2928070031
668 2928074350
669 2928086588
670 2928118849
671 2929160532
672 2929526540
673 2945915522
674 2945950457
675 2945974900
676 2945989080

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02653

BPD_transp_2

Branched-chain amino acid transport system / permease component

56

269

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
7kyp-assembly4.cif.gz_N psabc from streptococcus pneumoniae in complex with fab 0.5703 40 332
7kyo-assembly1.cif.gz_C-2 psabc from streptococcus pneumoniae in complex with fab 0.548 54 332
7kyp-assembly4.cif.gz_N psabc from streptococcus pneumoniae in complex with fab 0.5439 40 332
7kyo-assembly1.cif.gz_C-2 psabc from streptococcus pneumoniae in complex with fab 0.5313 54 332
7lb8-assembly1.cif.gz_B structure of a ferrichrome importer fhucdb from e. coli 0.5198 14 310
ID Description Score Start End Superfamily
af_P77315_52_317_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.8456 54 332 1.10.3470.10
af_P39328_55_321_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.8434 52 332 1.10.3470.10
af_P39328_55_321_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.8376 52 332 1.10.3470.10
af_P77315_52_317_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.8339 54 332 1.10.3470.10
af_P0AFS1_34_305_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.8322 53 328 1.10.3470.10
ID Description Score Start End GO Terms
AF-A0A6F8NS53-F1-model_v4 deleted 0.9787 24 335
AF-A0A4R9WAF9-F1-model_v4 ABC transporter permease 0.9782 8 335 GO:0005886
GO:0022857
AF-A0A1W6L5C6-F1-model_v4 ABC transporter permease 0.9781 1 340 GO:0005886
GO:0022857
AF-A0A2G8PBX1-F1-model_v4 ABC transporter permease 0.9779 7 335 GO:0005886
GO:0022857
AF-W6KBT9-F1-model_v4 Putative ABC transporter (Permease protein) 0.9755 5 335 GO:0005886
GO:0022857

Map