F413090

General Info

Members Datasets Scaffolds Average Seq Length
337 188 674 450

Family's Representative Sequence

Representative Sequence 3300015683|Ga0183362_10011|Ga0183362_1001112
Length 461
Sequence MKTRLTTGAPVRALWTGAVIALATHCALAAVSADEAKKLGTTLTPTGAERAGSADKSIPEYTGGLTTPPPGFEKGSGIRPDPYAAEKPLFSVTAQNAAQYEGKLTAGTAELLKKYPSMRVDVYPSHRSVAFPKYVVENTLKNATTVKTADGGLALEGTYAGIPFPIPKTGHEVMWNHLLRFTGQTYYTQYDSINVDAAGKAVLATTGQIYMDYPYYDPKRTTPSNEADIYFRTKIAYTAPARRAGEALLAQDYINSMKNGRRAWQYLPGQRRVKLAPDIAYDTPNPGTAGASTYDDAWVFNGAMDRYDFKLIGKKEMLIPYNSFKLVYAKDPYAVTTPNHLNPDYVRWEPHRVWVVEATLKADKRHIYAKRVFYVDEDSWVAVASDEYDARGQLYRAGFVYTNPAYEVPAPTAVGQSFHDFTTGSYNMTGLLGAYAVGVKFVEPLSTNAWSAEALAGSGVR

Samples

Sample ID Description Type Environment
1 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
2 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
11 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
12 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
13 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
14 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
18 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
19 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
20 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
21 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
22 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
23 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
26 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
27 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
28 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
31 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
32 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
33 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
34 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
35 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
36 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
37 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
40 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
41 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
42 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
43 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
44 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
45 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
46 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
47 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
48 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
49 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
50 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
51 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
52 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
53 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
54 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
55 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
80 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
81 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
85 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
86 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
87 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
88 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
89 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
90 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
91 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
92 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
93 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
94 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
95 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
96 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
97 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
98 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
99 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
100 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
101 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
102 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
103 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
104 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
105 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
106 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
107 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
108 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
109 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
110 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
111 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
112 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
113 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
114 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
115 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
116 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
117 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
118 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
119 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
120 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
121 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
122 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
123 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
124 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
125 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
126 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
127 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
128 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
129 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
130 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
131 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
132 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
133 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
134 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
135 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
136 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
137 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
138 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
139 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
140 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
141 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
142 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
143 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
144 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
145 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
146 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
147 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
148 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
149 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
150 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
151 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
152 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
153 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
154 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
155 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
156 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
157 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
158 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
159 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
160 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
161 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
162 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
163 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
164 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
165 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
166 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
167 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
168 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
169 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
170 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
171 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
172 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
173 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
174 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
175 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
176 2511231015 Pseudomonas sp. GM49 Isolate Nodule
177 2574179768 Azoarcus communis DSM 12120 Isolate Unclassified
178 2599185305 Pseudomonas sp. NFACC07-1 Isolate Rhizoplane
179 2643221589 Pseudomonas sp. Root68 Isolate Unclassified
180 2643221602 Pseudomonas sp. Root71 Isolate Unclassified
181 2643221645 Massilia sp. Root351 Isolate Unclassified
182 2738541300 Massilia sp. GV016 Isolate Unclassified
183 2738543004 Pseudomonas sp. GV085 Isolate Unclassified
184 2738543018 Massilia sp. GV045 Isolate Unclassified
185 2738543030 Massilia sp. GV097 Isolate Unclassified
186 2811994881 Pseudomonas sp. SLBN-26 Isolate Unclassified
187 2923519811 Pseudomonas otitidis SLBN-103 Isolate Rhizosphere
188 639633007 Azoarcus olearius BH72 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.14
Metatranscriptomes 0
Isolates 3.86

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.04
Nodule 0.89
Rhizoplane 2.37
Rhizosphere 87.83
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0183362_10011 3300015683 Bacteria 85355
2 Ga0070670_100178195 3300005331 Bacteria 1845
3 Ga0068868_100048703 3300005338 Bacteria 3324
4 Ga0070660_100013825 3300005339 Bacteria 5806
5 Ga0070668_100007958 3300005347 Bacteria 7871
6 Ga0070668_100016641 3300005347 Bacteria 5497
7 Ga0070668_100022234 3300005347 Bacteria 4793
8 Ga0070668_100023743 3300005347 Bacteria 4641
9 Ga0070675_100083698 3300005354 Bacteria 2663
10 Ga0070671_100022158 3300005355 Bacteria 5189
11 Ga0070667_100018895 3300005367 Bacteria 5713
12 Ga0070713_100000424 3300005436 Bacteria 26974
13 Ga0070662_100049142 3300005457 Bacteria 3041
14 Ga0068867_100022952 3300005459 Bacteria 4464
15 Ga0068853_100141377 3300005539 Bacteria 2161
16 Ga0070672_100002980 3300005543 Bacteria 10907
17 Ga0070672_100080718 3300005543 Bacteria 2606
18 Ga0070672_100130781 3300005543 Bacteria 2062
19 Ga0070693_100002423 3300005547 Bacteria 8581
20 Ga0070665_100263752 3300005548 Bacteria 1724
21 Ga0068855_100118695 3300005563 Bacteria 3029
22 Ga0068857_100017925 3300005577 Bacteria 6210
23 Ga0068854_100078803 3300005578 Bacteria 2428
24 Ga0068864_100159677 3300005618 Bacteria 2048
25 Ga0068864_100297722 3300005618 Bacteria 1509
26 Ga0068861_100011433 3300005719 Bacteria 6172
27 Ga0068861_100064795 3300005719 Bacteria 2813
28 Ga0068851_10025732 3300005834 Bacteria 2888
29 Ga0068863_100006767 3300005841 Bacteria 11240
30 Ga0068863_100044745 3300005841 Bacteria 4201
31 Ga0068863_100174194 3300005841 Bacteria 2064
32 Ga0068858_100005920 3300005842 Bacteria 11935
33 Ga0068860_100036301 3300005843 Bacteria 4723
34 Ga0068860_100093046 3300005843 Bacteria 2873
35 Ga0068862_100032644 3300005844 Bacteria 4399
36 Ga0075362_10014803 3300006177 Bacteria 3158
37 Ga0075369_10007899 3300006186 Bacteria 4075
38 Ga0097621_100039396 3300006237 Bacteria 3795
39 Ga0097621_100103876 3300006237 Bacteria 2394
40 Ga0075430_100129682 3300006846 Bacteria 2102
41 Ga0068865_100087325 3300006881 Bacteria 2254
42 Ga0075436_100020805 3300006914 Bacteria 4501
43 Ga0079104_1000141 3300006946 Bacteria 102054
44 Ga0105251_10026703 3300009011 Bacteria 2938
45 Ga0105244_10001024 3300009036 Bacteria 23429
46 Ga0105244_10041889 3300009036 Bacteria 2371
47 Ga0105247_10013045 3300009101 Bacteria 4982
48 Ga0105243_10086832 3300009148 Bacteria 2566
49 Ga0105242_10028834 3300009176 Bacteria 4421
50 Ga0105242_10168861 3300009176 Bacteria 1921
51 Ga0105239_10155334 3300010375 Bacteria 2555
52 Ga0157373_10117656 3300013100 Bacteria 1868
53 Ga0157370_10011540 3300013104 Bacteria 9225
54 Ga0157370_10014711 3300013104 Bacteria 7992
55 Ga0157374_10326237 3300013296 Bacteria 1522
56 Ga0157378_10047289 3300013297 Bacteria 3825
57 Ga0157378_10069876 3300013297 Bacteria 3151
58 Ga0163162_10109128 3300013306 Bacteria 2864
59 Ga0157372_10018816 3300013307 Bacteria 7432
60 Ga0157375_10011578 3300013308 Bacteria 7793
61 Ga0157375_10027747 3300013308 Bacteria 5297
62 Ga0157375_10083431 3300013308 Bacteria 3241
63 Ga0157375_10085291 3300013308 Bacteria 3208
64 Ga0157375_10110983 3300013308 Bacteria 2841
65 Ga0157380_10040985 3300014326 Bacteria 3611
66 Ga0182008_10004057 3300014497 Bacteria 8642
67 Ga0157379_10005299 3300014968 Bacteria 11082
68 Ga0157376_10009391 3300014969 Bacteria 7105
69 Ga0182006_1004535 3300015261 Bacteria 6835
70 Ga0182005_1002126 3300015265 Bacteria 7344
71 Ga0163161_10034162 3300017792 Bacteria 3637
72 Ga0213872_10000001 3300021361 Bacteria 662532
73 Ga0213872_10000097 3300021361 Bacteria 80834
74 Ga0213872_10000698 3300021361 Bacteria 25234
75 Ga0213872_10001166 3300021361 Bacteria 17853
76 Ga0213872_10001435 3300021361 Bacteria 15539
77 Ga0213872_10004065 3300021361 Bacteria 7879
78 Ga0213872_10010415 3300021361 Bacteria 4427
79 Ga0213872_10011814 3300021361 Bacteria 4126
80 Ga0213872_10014083 3300021361 Bacteria 3736
81 Ga0213872_10052110 3300021361 Bacteria 1857
82 Ga0209025_1004340 3300025294 Bacteria 12388
83 Ga0207655_1013337 3300025728 Bacteria 4726
84 Ga0207688_10069635 3300025901 Bacteria 1994
85 Ga0207645_10014497 3300025907 Bacteria 5273
86 Ga0207643_10051274 3300025908 Bacteria 2342
87 Ga0207657_10032120 3300025919 Bacteria 4746
88 Ga0207649_10040222 3300025920 Bacteria 2840
89 Ga0207650_10027747 3300025925 Bacteria 4055
90 Ga0207650_10047237 3300025925 Bacteria 3172
91 Ga0207650_10084021 3300025925 Bacteria 2419
92 Ga0207659_10057902 3300025926 Bacteria 2781
93 Ga0207659_10064604 3300025926 Bacteria 2649
94 Ga0207700_10000303 3300025928 Bacteria 29240
95 Ga0207644_10029998 3300025931 Bacteria 3776
96 Ga0207670_10021242 3300025936 Bacteria 4002
97 Ga0207691_10008348 3300025940 Bacteria 9948
98 Ga0207691_10008741 3300025940 Bacteria 9713
99 Ga0207691_10090562 3300025940 Bacteria 2741
100 Ga0207689_10002612 3300025942 Bacteria 16675
101 Ga0207689_10017103 3300025942 Bacteria 6138
102 Ga0207712_10028845 3300025961 Bacteria 3716
103 Ga0207712_10105631 3300025961 Bacteria 2102
104 Ga0207668_10002613 3300025972 Bacteria 10534
105 Ga0207668_10021978 3300025972 Bacteria 4076
106 Ga0207658_10021327 3300025986 Bacteria 4496
107 Ga0207658_10050949 3300025986 Bacteria 3049
108 Ga0207703_10052669 3300026035 Bacteria 3306
109 Ga0207639_10126596 3300026041 Bacteria 2108
110 Ga0207641_10006724 3300026088 Bacteria 9634
111 Ga0207641_10303425 3300026088 Bacteria 1509
112 Ga0207648_10044446 3300026089 Bacteria 3897
113 Ga0207648_10085780 3300026089 Bacteria 2746
114 Ga0207676_10029555 3300026095 Bacteria 4105
115 Ga0207676_10303350 3300026095 Bacteria 1459
116 Ga0207674_10058411 3300026116 Bacteria 3908
117 Ga0207675_100005140 3300026118 Bacteria 12597
118 Ga0207675_100024016 3300026118 Bacteria 5668
119 Ga0207675_100183609 3300026118 Bacteria 2004
120 Ga0207683_10031306 3300026121 Bacteria 4617
121 Ga0209281_1000258 3300027111 Bacteria 102068
122 Ga0207428_10005760 3300027907 Bacteria 11501
123 Ga0268266_10180410 3300028379 Bacteria 1922
124 Ga0268265_10073541 3300028380 Bacteria 2670
125 Ga0268264_10051275 3300028381 Bacteria 3438
126 Ga0265334_10035078 3300028573 Bacteria 1988
127 Ga0307515_10000041 3300028794 Bacteria 319110
128 Ga0265332_10001484 3300031238 Bacteria 13083
129 Ga0265328_10001382 3300031239 Bacteria 11208
130 Ga0265331_10008823 3300031250 Bacteria 5709
131 Ga0265327_10000572 3300031251 Bacteria 62611
132 Ga0265327_10000776 3300031251 Bacteria 49288
133 Ga0307408_100001425 3300031548 Bacteria 17778
134 Ga0265314_10022243 3300031711 Bacteria 4858
135 Ga0265314_10067781 3300031711 Bacteria 2402
136 Ga0395905_0005432 3300037471 Bacteria 13019
137 Ga0436361_0016548 3300039447 Bacteria 24675
138 Ga0436361_0181463 3300039447 Bacteria 16266
139 Ga0436361_0212275 3300039447 Bacteria 78927
140 Ga0436361_0222362 3300039447 Bacteria 6204
141 Ga0436361_0404657 3300039447 Bacteria 144351
142 Ga0436361_0525760 3300039447 Bacteria 8312
143 Ga0436361_0532572 3300039447 Bacteria 20869
144 Ga0436361_0578080 3300039447 Bacteria 8606
145 Ga0436361_0611575 3300039447 Bacteria 11289
146 Ga0436361_0900049 3300039447 Bacteria 10438
147 Ga0436361_1101498 3300039447 Bacteria 17339
148 Ga0436361_1150385 3300039447 Bacteria 105721
149 Ga0439436_0007773 3300041404 Bacteria 3295
150 Ga0439438_000286 3300041405 Bacteria 22724
151 Ga0439438_002592 3300041405 Bacteria 7646
152 Ga0439438_004372 3300041405 Bacteria 5439
153 Ga0439438_012156 3300041405 Bacteria 2651
154 Ga0439447_000189 3300041407 Bacteria 21880
155 Ga0439447_004369 3300041407 Bacteria 4875
156 Ga0439447_006099 3300041407 Bacteria 3942
157 Ga0439447_019741 3300041407 Bacteria 1793
158 Ga0439466_0000262 3300041411 Bacteria 20434
159 Ga0439466_0000699 3300041411 Bacteria 12668
160 Ga0439466_0002577 3300041411 Bacteria 7099
161 Ga0439466_0003099 3300041411 Bacteria 6464
162 Ga0439466_0018775 3300041411 Bacteria 2478
163 Ga0439452_000348 3300042010 Bacteria 28627
164 Ga0439452_011126 3300042010 Bacteria 2594
165 Ga0439452_012927 3300042010 Bacteria 2357
166 Ga0439456_000634 3300042013 Bacteria 7304
167 Ga0450920_005818 3300042122 Bacteria 2202
168 Ga0450902_000133 3300042137 Bacteria 8096
169 Ga0450907_000078 3300042146 Bacteria 37192
170 Ga0450910_000011 3300042147 Bacteria 37335
171 Ga0439446_0001286 3300042156 Bacteria 5636
172 Ga0450908_000021 3300042184 Bacteria 37322
173 Ga0439434_0008466 3300042435 Bacteria 3016
174 Ga0439460_0007835 3300042461 Bacteria 2682
175 Ga0466966_0027361 3300044684 Bacteria 3719
176 Ga0451576_0050361 3300045051 Bacteria 4368
177 Ga0495617_000381 3300046452 Bacteria 24612
178 Ga0495617_006153 3300046452 Bacteria 4223
179 Ga0495617_030395 3300046452 Bacteria 1816
180 Ga0495603_0000793 3300046455 Bacteria 18057
181 Ga0495603_0017191 3300046455 Bacteria 4378
182 Ga0495590_0000048 3300046457 Bacteria 116368
183 Ga0495590_0002319 3300046457 Bacteria 7914
184 Ga0495591_000595 3300046458 Bacteria 27350
185 Ga0495653_0096397 3300046463 Bacteria 2151
186 Ga0495650_0000019 3300046471 Bacteria 533849
187 Ga0495650_0000129 3300046471 Bacteria 177255
188 Ga0495650_0000721 3300046471 Bacteria 41918
189 Ga0495605_0001212 3300046474 Bacteria 17182
190 Ga0495605_0004739 3300046474 Bacteria 7953
191 Ga0495639_0012164 3300046475 Bacteria 3710
192 Ga0495584_0000001 3300046491 Bacteria 649329
193 Ga0495584_0000091 3300046491 Bacteria 62543
194 Ga0495584_0000359 3300046491 Bacteria 31722
195 Ga0495584_0015696 3300046491 Bacteria 3862
196 Ga0495585_0000013 3300046492 Bacteria 195993
197 Ga0495585_0000020 3300046492 Bacteria 156639
198 Ga0495585_0000025 3300046492 Bacteria 148326
199 Ga0495585_0000117 3300046492 Bacteria 85886
200 Ga0495585_0000244 3300046492 Bacteria 56121
201 Ga0495585_0002004 3300046492 Bacteria 15098
202 Ga0495585_0021844 3300046492 Bacteria 3674
203 Ga0495596_0003268 3300046500 Bacteria 8280
204 Ga0495607_0001822 3300046501 Bacteria 18181
205 Ga0495583_0000011 3300046506 Bacteria 350215
206 Ga0495583_0000014 3300046506 Bacteria 320136
207 Ga0495583_0000075 3300046506 Bacteria 177074
208 Ga0495583_0000181 3300046506 Bacteria 107973
209 Ga0495583_0013460 3300046506 Bacteria 4561
210 Ga0495606_0001252 3300046507 Bacteria 35440
211 Ga0495606_0004362 3300046507 Bacteria 14185
212 Ga0495606_0006087 3300046507 Bacteria 11264
213 Ga0495606_0006801 3300046507 Bacteria 10442
214 Ga0495606_0008387 3300046507 Bacteria 8992
215 Ga0495610_0017228 3300046512 Bacteria 4124
216 Ga0495616_0000878 3300046513 Bacteria 21806
217 Ga0495616_0001990 3300046513 Bacteria 13748
218 Ga0495616_0005593 3300046513 Bacteria 7698
219 Ga0495616_0007254 3300046513 Bacteria 6638
220 Ga0495620_0004488 3300046515 Bacteria 7854
221 Ga0495644_0005214 3300046523 Bacteria 5080
222 Ga0495644_0005531 3300046523 Bacteria 4932
223 Ga0495648_0000031 3300046524 Bacteria 213136
224 Ga0495648_0000128 3300046524 Bacteria 88948
225 Ga0495648_0001462 3300046524 Bacteria 23121
226 Ga0495663_0001506 3300046525 Bacteria 7318
227 Ga0495642_0000079 3300046528 Bacteria 57342
228 Ga0495642_0001642 3300046528 Bacteria 9722
229 Ga0495586_0010867 3300046535 Bacteria 4836
230 Ga0495609_0000391 3300046538 Bacteria 37059
231 Ga0495609_0007245 3300046538 Bacteria 5563
232 Ga0495609_0037208 3300046538 Bacteria 2195
233 Ga0495609_0049380 3300046538 Bacteria 1878
234 Ga0495621_0000090 3300046539 Bacteria 18262
235 Ga0495597_0002623 3300046542 Bacteria 11191
236 Ga0495622_0000023 3300046557 Bacteria 155188
237 Ga0495622_0001929 3300046557 Bacteria 10189
238 Ga0495622_0002345 3300046557 Bacteria 9206
239 Ga0495633_0000318 3300046558 Bacteria 54641
240 Ga0495633_0001399 3300046558 Bacteria 18799
241 Ga0495633_0002132 3300046558 Bacteria 14171
242 Ga0495656_0004815 3300046615 Bacteria 4645
243 Ga0495656_0005259 3300046615 Bacteria 4461
244 Ga0495656_0005951 3300046615 Bacteria 4244
245 Ga0495668_0003118 3300046616 Bacteria 12808
246 Ga0495668_0007646 3300046616 Bacteria 6877
247 Ga0495668_0026058 3300046616 Bacteria 3319
248 Ga0495625_0013808 3300046660 Bacteria 6473
249 Ga0495625_0021881 3300046660 Bacteria 4910
250 Ga0495625_0028104 3300046660 Bacteria 4221
251 Ga0495659_0000275 3300046664 Bacteria 20985
252 Ga0495659_0012024 3300046664 Bacteria 2796
253 Ga0495659_0021536 3300046664 Bacteria 2173
254 Ga0495661_0050152 3300046665 Bacteria 2528
255 Ga0495661_0091282 3300046665 Bacteria 1732
256 Ga0495588_0024259 3300046674 Bacteria 3012
257 Ga0495669_0007456 3300046684 Bacteria 4588
258 Ga0495670_0000128 3300046691 Bacteria 32698
259 Ga0495670_0003594 3300046691 Bacteria 7613
260 Ga0495671_0000927 3300046692 Bacteria 20769
261 Ga0495671_0001294 3300046692 Bacteria 17079
262 Ga0495671_0004774 3300046692 Bacteria 8011
263 Ga0495671_0015881 3300046692 Bacteria 4030
264 Ga0495649_0077375 3300046694 Bacteria 1780
265 Ga0495589_0009843 3300046794 Bacteria 4965
266 Ga0495600_0002025 3300046809 Bacteria 11406
267 Ga0495660_0001094 3300046810 Bacteria 19365
268 Ga0495660_0002511 3300046810 Bacteria 11704
269 Ga0495660_0010030 3300046810 Bacteria 5510
270 Ga0495660_0051187 3300046810 Bacteria 2248
271 Ga0495636_0000374 3300047318 Bacteria 16879
272 Ga0495636_0000459 3300047318 Bacteria 15097
273 Ga0495636_0002936 3300047318 Bacteria 6597
274 Ga0495636_0004794 3300047318 Bacteria 5298
275 Ga0495672_0002215 3300047320 Bacteria 18091
276 Ga0495672_0007189 3300047320 Bacteria 8413
277 Ga0495672_0027849 3300047320 Bacteria 3585
278 Ga0495680_0004507 3300047322 Bacteria 13322
279 Ga0495683_0000005 3300047323 Bacteria 287871
280 Ga0495683_0000709 3300047323 Bacteria 24404
281 Ga0495683_0061342 3300047323 Bacteria 1862
282 Ga0495687_000565 3300047443 Bacteria 43614
283 Ga0495687_002655 3300047443 Bacteria 13948
284 Ga0495675_0050122 3300047444 Bacteria 2654
285 Ga0495685_000002 3300047447 Bacteria 132680
286 Ga0495673_0000766 3300047469 Bacteria 30473
287 Ga0495673_0001754 3300047469 Bacteria 16524
288 Ga0495673_0046260 3300047469 Bacteria 1929
289 Ga0495681_0001281 3300047470 Bacteria 19038
290 Ga0495681_0004227 3300047470 Bacteria 9853
291 Ga0495681_0005576 3300047470 Bacteria 8401
292 Ga0495593_0039305 3300047673 Bacteria 2551
293 Ga0495615_0000343 3300048090 Bacteria 7591
294 Ga0495626_0000100 3300048091 Bacteria 110337
295 Ga0495626_0001367 3300048091 Bacteria 19683
296 Ga0495626_0009631 3300048091 Bacteria 5212
297 Ga0496102_0000064 3300048905 Bacteria 161979
298 Ga0496102_0247675 3300048905 Bacteria 1680
299 Ga0496109_0135726 3300048912 Bacteria 2299
300 Ga0496110_0000001 3300048913 Bacteria 232652
301 Ga0496110_0007207 3300048913 Bacteria 8856
302 Ga0496111_0009576 3300048914 Bacteria 6472
303 Ga0496111_0277690 3300048914 Bacteria 1243
304 Ga0496121_0003110 3300048924 Bacteria 23986
305 Ga0496121_0003340 3300048924 Bacteria 23024
306 Ga0495678_004935 3300049459 Bacteria 7532
307 Ga0495678_021096 3300049459 Bacteria 2873
308 Ga0495682_0000016 3300049460 Bacteria 233668
309 Ga0495682_0012637 3300049460 Bacteria 3234
310 nmdc:mga08x19_9690_c1 3300050514 Bacteria 5767
311 nmdc:mga0sz30_1706_c1 3300050516 Bacteria 7796
312 Ga0500607_004984 3300053121 Bacteria 8837
313 Ga0500559_0029483 3300053136 Bacteria 2350
314 Ga0500636_0000334 3300053177 Bacteria 26118
315 Ga0500636_0000901 3300053177 Bacteria 15969
316 Ga0500636_0002781 3300053177 Bacteria 9762
317 Ga0500636_0011389 3300053177 Bacteria 5206
318 Ga0500636_0041748 3300053177 Bacteria 2712
319 Ga0500637_0014647 3300053178 Bacteria 4140
320 Ga0500637_0027052 3300053178 Bacteria 3164
321 Ga0500625_003451 3300053729 Bacteria 6251
322 Ga0500625_009239 3300053729 Bacteria 4388
323 Ga0500625_015631 3300053729 Bacteria 3524
324 Ga0500625_016525 3300053729 Bacteria 3438
325 2511322637 2511231015 Bacteria 6598026
326 2574431078 2574179768 Bacteria 4907129
327 2599958436 2599185305 Bacteria 6748700
328 2643953489 2643221589 Bacteria 6250934
329 2644021231 2643221602 Bacteria 6249926
330 2644252658 2643221645 Bacteria 7207331
331 2738843886 2738541300 Bacteria 6675882
332 2739199587 2738543004 Bacteria 6381073
333 2739274553 2738543018 Bacteria 6718814
334 2739343597 2738543030 Bacteria 6719714
335 2812370464 2811994881 Bacteria 6298475
336 2923524555 2923519811 Bacteria 6298479
337 639787409 639633007 Bacteria 4376040
338 Ga0183362_10011
339 Ga0070670_100178195
340 Ga0068868_100048703
341 Ga0070660_100013825
342 Ga0070668_100007958
343 Ga0070668_100016641
344 Ga0070668_100022234
345 Ga0070668_100023743
346 Ga0070675_100083698
347 Ga0070671_100022158
348 Ga0070667_100018895
349 Ga0070713_100000424
350 Ga0070662_100049142
351 Ga0068867_100022952
352 Ga0068853_100141377
353 Ga0070672_100002980
354 Ga0070672_100080718
355 Ga0070672_100130781
356 Ga0070693_100002423
357 Ga0070665_100263752
358 Ga0068855_100118695
359 Ga0068857_100017925
360 Ga0068854_100078803
361 Ga0068864_100159677
362 Ga0068864_100297722
363 Ga0068861_100011433
364 Ga0068861_100064795
365 Ga0068851_10025732
366 Ga0068863_100006767
367 Ga0068863_100044745
368 Ga0068863_100174194
369 Ga0068858_100005920
370 Ga0068860_100036301
371 Ga0068860_100093046
372 Ga0068862_100032644
373 Ga0075362_10014803
374 Ga0075369_10007899
375 Ga0097621_100039396
376 Ga0097621_100103876
377 Ga0075430_100129682
378 Ga0068865_100087325
379 Ga0075436_100020805
380 Ga0079104_1000141
381 Ga0105251_10026703
382 Ga0105244_10001024
383 Ga0105244_10041889
384 Ga0105247_10013045
385 Ga0105243_10086832
386 Ga0105242_10028834
387 Ga0105242_10168861
388 Ga0105239_10155334
389 Ga0157373_10117656
390 Ga0157370_10011540
391 Ga0157370_10014711
392 Ga0157374_10326237
393 Ga0157378_10047289
394 Ga0157378_10069876
395 Ga0163162_10109128
396 Ga0157372_10018816
397 Ga0157375_10011578
398 Ga0157375_10027747
399 Ga0157375_10083431
400 Ga0157375_10085291
401 Ga0157375_10110983
402 Ga0157380_10040985
403 Ga0182008_10004057
404 Ga0157379_10005299
405 Ga0157376_10009391
406 Ga0182006_1004535
407 Ga0182005_1002126
408 Ga0163161_10034162
409 Ga0213872_10000001
410 Ga0213872_10000097
411 Ga0213872_10000698
412 Ga0213872_10001166
413 Ga0213872_10001435
414 Ga0213872_10004065
415 Ga0213872_10010415
416 Ga0213872_10011814
417 Ga0213872_10014083
418 Ga0213872_10052110
419 Ga0209025_1004340
420 Ga0207655_1013337
421 Ga0207688_10069635
422 Ga0207645_10014497
423 Ga0207643_10051274
424 Ga0207657_10032120
425 Ga0207649_10040222
426 Ga0207650_10027747
427 Ga0207650_10047237
428 Ga0207650_10084021
429 Ga0207659_10057902
430 Ga0207659_10064604
431 Ga0207700_10000303
432 Ga0207644_10029998
433 Ga0207670_10021242
434 Ga0207691_10008348
435 Ga0207691_10008741
436 Ga0207691_10090562
437 Ga0207689_10002612
438 Ga0207689_10017103
439 Ga0207712_10028845
440 Ga0207712_10105631
441 Ga0207668_10002613
442 Ga0207668_10021978
443 Ga0207658_10021327
444 Ga0207658_10050949
445 Ga0207703_10052669
446 Ga0207639_10126596
447 Ga0207641_10006724
448 Ga0207641_10303425
449 Ga0207648_10044446
450 Ga0207648_10085780
451 Ga0207676_10029555
452 Ga0207676_10303350
453 Ga0207674_10058411
454 Ga0207675_100005140
455 Ga0207675_100024016
456 Ga0207675_100183609
457 Ga0207683_10031306
458 Ga0209281_1000258
459 Ga0207428_10005760
460 Ga0268266_10180410
461 Ga0268265_10073541
462 Ga0268264_10051275
463 Ga0265334_10035078
464 Ga0307515_10000041
465 Ga0265332_10001484
466 Ga0265328_10001382
467 Ga0265331_10008823
468 Ga0265327_10000572
469 Ga0265327_10000776
470 Ga0307408_100001425
471 Ga0265314_10022243
472 Ga0265314_10067781
473 Ga0395905_0005432
474 Ga0436361_0016548
475 Ga0436361_0181463
476 Ga0436361_0212275
477 Ga0436361_0222362
478 Ga0436361_0404657
479 Ga0436361_0525760
480 Ga0436361_0532572
481 Ga0436361_0578080
482 Ga0436361_0611575
483 Ga0436361_0900049
484 Ga0436361_1101498
485 Ga0436361_1150385
486 Ga0439436_0007773
487 Ga0439438_000286
488 Ga0439438_002592
489 Ga0439438_004372
490 Ga0439438_012156
491 Ga0439447_000189
492 Ga0439447_004369
493 Ga0439447_006099
494 Ga0439447_019741
495 Ga0439466_0000262
496 Ga0439466_0000699
497 Ga0439466_0002577
498 Ga0439466_0003099
499 Ga0439466_0018775
500 Ga0439452_000348
501 Ga0439452_011126
502 Ga0439452_012927
503 Ga0439456_000634
504 Ga0450920_005818
505 Ga0450902_000133
506 Ga0450907_000078
507 Ga0450910_000011
508 Ga0439446_0001286
509 Ga0450908_000021
510 Ga0439434_0008466
511 Ga0439460_0007835
512 Ga0466966_0027361
513 Ga0451576_0050361
514 Ga0495617_000381
515 Ga0495617_006153
516 Ga0495617_030395
517 Ga0495603_0000793
518 Ga0495603_0017191
519 Ga0495590_0000048
520 Ga0495590_0002319
521 Ga0495591_000595
522 Ga0495653_0096397
523 Ga0495650_0000019
524 Ga0495650_0000129
525 Ga0495650_0000721
526 Ga0495605_0001212
527 Ga0495605_0004739
528 Ga0495639_0012164
529 Ga0495584_0000001
530 Ga0495584_0000091
531 Ga0495584_0000359
532 Ga0495584_0015696
533 Ga0495585_0000013
534 Ga0495585_0000020
535 Ga0495585_0000025
536 Ga0495585_0000117
537 Ga0495585_0000244
538 Ga0495585_0002004
539 Ga0495585_0021844
540 Ga0495596_0003268
541 Ga0495607_0001822
542 Ga0495583_0000011
543 Ga0495583_0000014
544 Ga0495583_0000075
545 Ga0495583_0000181
546 Ga0495583_0013460
547 Ga0495606_0001252
548 Ga0495606_0004362
549 Ga0495606_0006087
550 Ga0495606_0006801
551 Ga0495606_0008387
552 Ga0495610_0017228
553 Ga0495616_0000878
554 Ga0495616_0001990
555 Ga0495616_0005593
556 Ga0495616_0007254
557 Ga0495620_0004488
558 Ga0495644_0005214
559 Ga0495644_0005531
560 Ga0495648_0000031
561 Ga0495648_0000128
562 Ga0495648_0001462
563 Ga0495663_0001506
564 Ga0495642_0000079
565 Ga0495642_0001642
566 Ga0495586_0010867
567 Ga0495609_0000391
568 Ga0495609_0007245
569 Ga0495609_0037208
570 Ga0495609_0049380
571 Ga0495621_0000090
572 Ga0495597_0002623
573 Ga0495622_0000023
574 Ga0495622_0001929
575 Ga0495622_0002345
576 Ga0495633_0000318
577 Ga0495633_0001399
578 Ga0495633_0002132
579 Ga0495656_0004815
580 Ga0495656_0005259
581 Ga0495656_0005951
582 Ga0495668_0003118
583 Ga0495668_0007646
584 Ga0495668_0026058
585 Ga0495625_0013808
586 Ga0495625_0021881
587 Ga0495625_0028104
588 Ga0495659_0000275
589 Ga0495659_0012024
590 Ga0495659_0021536
591 Ga0495661_0050152
592 Ga0495661_0091282
593 Ga0495588_0024259
594 Ga0495669_0007456
595 Ga0495670_0000128
596 Ga0495670_0003594
597 Ga0495671_0000927
598 Ga0495671_0001294
599 Ga0495671_0004774
600 Ga0495671_0015881
601 Ga0495649_0077375
602 Ga0495589_0009843
603 Ga0495600_0002025
604 Ga0495660_0001094
605 Ga0495660_0002511
606 Ga0495660_0010030
607 Ga0495660_0051187
608 Ga0495636_0000374
609 Ga0495636_0000459
610 Ga0495636_0002936
611 Ga0495636_0004794
612 Ga0495672_0002215
613 Ga0495672_0007189
614 Ga0495672_0027849
615 Ga0495680_0004507
616 Ga0495683_0000005
617 Ga0495683_0000709
618 Ga0495683_0061342
619 Ga0495687_000565
620 Ga0495687_002655
621 Ga0495675_0050122
622 Ga0495685_000002
623 Ga0495673_0000766
624 Ga0495673_0001754
625 Ga0495673_0046260
626 Ga0495681_0001281
627 Ga0495681_0004227
628 Ga0495681_0005576
629 Ga0495593_0039305
630 Ga0495615_0000343
631 Ga0495626_0000100
632 Ga0495626_0001367
633 Ga0495626_0009631
634 Ga0496102_0000064
635 Ga0496102_0247675
636 Ga0496109_0135726
637 Ga0496110_0000001
638 Ga0496110_0007207
639 Ga0496111_0009576
640 Ga0496111_0277690
641 Ga0496121_0003110
642 Ga0496121_0003340
643 Ga0495678_004935
644 Ga0495678_021096
645 Ga0495682_0000016
646 Ga0495682_0012637
647 nmdc:mga08x19_9690_c1
648 nmdc:mga0sz30_1706_c1
649 Ga0500607_004984
650 Ga0500559_0029483
651 Ga0500636_0000334
652 Ga0500636_0000901
653 Ga0500636_0002781
654 Ga0500636_0011389
655 Ga0500636_0041748
656 Ga0500637_0014647
657 Ga0500637_0027052
658 Ga0500625_003451
659 Ga0500625_009239
660 Ga0500625_015631
661 Ga0500625_016525
662 2511322637
663 2574431078
664 2599958436
665 2643953489
666 2644021231
667 2644252658
668 2738843886
669 2739199587
670 2739274553
671 2739343597
672 2812370464
673 2923524555
674 639787409

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07044

DUF1329

Protein of unknown function (DUF1329)

91

456

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
3bk5-assembly1.cif.gz_A crystal structure of putative outer membrane lipoprotein-sorting protein domain from vibrio parahaemolyticus 0.8177 152 437
3bk5-assembly1.cif.gz_A crystal structure of putative outer membrane lipoprotein-sorting protein domain from vibrio parahaemolyticus 0.7929 152 437
4z48-assembly2.cif.gz_B crystal structure of a duf1329 family protein (despig_00262) from desulfovibrio piger atcc 29098 at 1.75 a resolution 0.7677 163 436
3buu-assembly2.cif.gz_B crystal structure of lola superfamily protein ne2245 from nitrosomonas europaea 0.7116 147 435
4z48-assembly2.cif.gz_B crystal structure of a duf1329 family protein (despig_00262) from desulfovibrio piger atcc 29098 at 1.75 a resolution 0.709 163 436
ID Description Score Start End Superfamily
3bk5A00 Mainly Beta;Clam;outer membrane lipoprotein receptor (LolB), chain A;Lipoprotein localisation LolA/LolB/LppX 0.7679 152 437 2.50.20.10
4z48A00 Mainly Beta;Clam;outer membrane lipoprotein receptor (LolB), chain A;Lipoprotein localisation LolA/LolB/LppX 0.7469 168 436 2.50.20.10
3bk5A00 Mainly Beta;Clam;outer membrane lipoprotein receptor (LolB), chain A;Lipoprotein localisation LolA/LolB/LppX 0.7449 152 437 2.50.20.10
4z48A00 Mainly Beta;Clam;outer membrane lipoprotein receptor (LolB), chain A;Lipoprotein localisation LolA/LolB/LppX 0.6882 168 436 2.50.20.10
3buuB00 Mainly Beta;Clam;outer membrane lipoprotein receptor (LolB), chain A;Lipoprotein localisation LolA/LolB/LppX 0.6855 147 435 2.50.20.10
ID Description Score Start End GO Terms
AF-A0A520GJ54-F1-model_v4 DUF1329 domain-containing protein 0.9853 123 442
AF-A0A520GJ54-F1-model_v4 DUF1329 domain-containing protein 0.9822 123 442
AF-A0A536XF71-F1-model_v4 DUF1329 domain-containing protein 0.9763 284 442
AF-L8MN68-F1-model_v4 deleted 0.9738 231 442
AF-A0A562UZN9-F1-model_v4 Uncharacterized protein DUF1329 0.9716 81 442

Map