F405236

General Info

Members Datasets Scaffolds Average Seq Length
319 171 638 360

Family's Representative Sequence

Representative Sequence 3300046809|Ga0495600_0029500|Ga0495600_0029500_884_2008
Length 359
Sequence MYRSDVVGSLLRPAYLKKARDEFAAGRLTDADFKRLEDRAVDESVTLHLRTGMNVLSDGEMRRYAFFGHLVEATEGFDKVGGWSIPFHNEKGEEIVQPRPVVVSRLRRKRHMCAEEFTYLRARTDHPAKTTLGGAYPTVDAFLADLVDLLRDEVAELVRLGCTYIQVDSPQYAALIDSKIREGYRQRGNDPDRLLDLSIEMDNAVIAGHPNVVFGLHLCRGNNQSKFYASGDYAPIAKVFRQTKFQRFLLEFDDERSGGFEPLSQVPSDRTVVLGLVSTKKSVLESKDELKSRIRAAEKFVPLDRLALSPQCGFASTIEGNLLSEAAQEAKLRLVAETAREVWGEARPSGASSVKGKSA

Samples

Sample ID Description Type Environment
1 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
2 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
39 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
46 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
47 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
48 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
49 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
51 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
52 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
53 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
54 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
55 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
56 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
57 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
58 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
60 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
61 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
62 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
64 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
65 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
66 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
67 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
68 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
69 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
70 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
71 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
72 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
73 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
74 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
75 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
76 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
77 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
78 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
79 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
80 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
81 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
82 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
83 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
84 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
85 3300022732 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU1 Metagenome Rhizosphere
86 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
87 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
88 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
127 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
130 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
131 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
132 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
133 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
134 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
135 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
136 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
137 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
138 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
139 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
140 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
141 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
142 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
143 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
144 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
145 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
146 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
147 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
148 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
149 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
150 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
151 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
152 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
153 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
157 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
158 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
159 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
160 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
161 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
162 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
163 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
164 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
165 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
166 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
167 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
168 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
169 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
170 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
171 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.37
Metatranscriptomes 0.63
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.31
Nodule 0
Rhizoplane 2.82
Rhizosphere 96.55
Stem 0
Stem Tuber 0
Unclassified 15.67

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495600_0029500 3300046809 Bacteria 3552
2 Ga0058863_11966074 3300004799 Bacteria 3246
3 Ga0070683_100010270 3300005329 Bacteria 8047
4 Ga0070683_100015682 3300005329 Bacteria 6663
5 Ga0070683_100017766 3300005329 Bacteria 6285
6 Ga0070670_100016532 3300005331 Bacteria 6333
7 Ga0068869_100002795 3300005334 Bacteria 10575
8 Ga0068869_100055957 3300005334 Unclassified 2876
9 Ga0068869_100075035 3300005334 Bacteria 2512
10 Ga0070680_100120415 3300005336 Bacteria 2191
11 Ga0068868_100007045 3300005338 Bacteria 7991
12 Ga0068868_100014483 3300005338 Bacteria 5813
13 Ga0068868_100016531 3300005338 Bacteria 5482
14 Ga0070661_100026326 3300005344 Unclassified 4183
15 Ga0070669_100029105 3300005353 Bacteria 3980
16 Ga0070671_100077264 3300005355 Bacteria 2782
17 Ga0070673_100120933 3300005364 Unclassified 2184
18 Ga0070673_100211487 3300005364 Bacteria 1675
19 Ga0070688_100096880 3300005365 Unclassified 1938
20 Ga0070709_10061886 3300005434 Bacteria 2385
21 Ga0070714_100202338 3300005435 Bacteria 1817
22 Ga0070714_100352418 3300005435 Bacteria 1383
23 Ga0070713_100000741 3300005436 Bacteria 20902
24 Ga0070705_100016735 3300005440 Bacteria 3815
25 Ga0070708_100002943 3300005445 Bacteria 13233
26 Ga0070708_100004559 3300005445 Bacteria 10913
27 Ga0070708_100011123 3300005445 Bacteria 7316
28 Ga0070708_100242600 3300005445 Bacteria 1692
29 Ga0070662_100250031 3300005457 Bacteria 1425
30 Ga0070681_10000091 3300005458 Bacteria 67429
31 Ga0070681_10160340 3300005458 Unclassified 2173
32 Ga0068867_100078378 3300005459 Unclassified 2485
33 Ga0070706_100000018 3300005467 Bacteria 166663
34 Ga0070706_100010719 3300005467 Bacteria 8508
35 Ga0070706_100073601 3300005467 Bacteria 3162
36 Ga0070707_100002656 3300005468 Bacteria 16986
37 Ga0070707_100003180 3300005468 Bacteria 15535
38 Ga0070707_100028962 3300005468 Bacteria 5271
39 Ga0070698_100000093 3300005471 Bacteria 71479
40 Ga0070698_100000827 3300005471 Bacteria 33885
41 Ga0070698_100001376 3300005471 Bacteria 26998
42 Ga0070698_100014750 3300005471 Bacteria 8254
43 Ga0070698_100039076 3300005471 Bacteria 4887
44 Ga0070699_100000858 3300005518 Bacteria 28228
45 Ga0070699_100001717 3300005518 Bacteria 19976
46 Ga0070699_100009851 3300005518 Bacteria 8276
47 Ga0070699_100051128 3300005518 Unclassified 3578
48 Ga0070699_100139775 3300005518 Bacteria 2138
49 Ga0070699_100160640 3300005518 Bacteria 1988
50 Ga0070679_100003555 3300005530 Bacteria 14279
51 Ga0070679_100101622 3300005530 Unclassified 2862
52 Ga0070679_100414753 3300005530 Bacteria 1292
53 Ga0070684_100011488 3300005535 Bacteria 7053
54 Ga0070697_100000148 3300005536 Bacteria 57034
55 Ga0070697_100007294 3300005536 Bacteria 8600
56 Ga0070697_100017632 3300005536 Bacteria 5623
57 Ga0070697_100025926 3300005536 Unclassified 4676
58 Ga0068853_100380674 3300005539 Unclassified 1318
59 Ga0070665_100226622 3300005548 Unclassified 1869
60 Ga0068855_100001406 3300005563 Bacteria 29877
61 Ga0068855_100004723 3300005563 Bacteria 16638
62 Ga0068855_100009433 3300005563 Bacteria 11790
63 Ga0068855_100136309 3300005563 Bacteria 2800
64 Ga0070664_100000916 3300005564 Bacteria 22998
65 Ga0070664_100023927 3300005564 Bacteria 5048
66 Ga0068857_100002529 3300005577 Bacteria 14973
67 Ga0068857_100008911 3300005577 Bacteria 8691
68 Ga0068854_100013595 3300005578 Bacteria 5348
69 Ga0068854_100094206 3300005578 Unclassified 2233
70 Ga0068856_100000252 3300005614 Bacteria 58351
71 Ga0068856_100000685 3300005614 Bacteria 36811
72 Ga0068856_100001014 3300005614 Bacteria 29891
73 Ga0070702_100009183 3300005615 Bacteria 4827
74 Ga0068852_100143409 3300005616 Bacteria 2213
75 Ga0068859_100001599 3300005617 Bacteria 23127
76 Ga0068859_100014638 3300005617 Bacteria 7881
77 Ga0068859_100451653 3300005617 Unclassified 1381
78 Ga0068864_100004329 3300005618 Bacteria 11657
79 Ga0068864_100012508 3300005618 Bacteria 7018
80 Ga0068866_10004641 3300005718 Bacteria 5637
81 Ga0068861_100077207 3300005719 Bacteria 2597
82 Ga0068851_10167555 3300005834 Bacteria 1210
83 Ga0068863_100014009 3300005841 Bacteria 7726
84 Ga0068863_100101064 3300005841 Unclassified 2741
85 Ga0068858_100003636 3300005842 Bacteria 15256
86 Ga0068858_100007458 3300005842 Bacteria 10572
87 Ga0068858_100012226 3300005842 Bacteria 8094
88 Ga0068858_100012753 3300005842 Bacteria 7921
89 Ga0068860_100007366 3300005843 Bacteria 11001
90 Ga0068860_100008059 3300005843 Bacteria 10498
91 Ga0068860_100088951 3300005843 Bacteria 2940
92 Ga0068862_100135358 3300005844 Bacteria 2183
93 Ga0081455_10007378 3300005937 Bacteria 11592
94 Ga0081539_10000009 3300005985 Bacteria 509286
95 Ga0081539_10011732 3300005985 Bacteria 6871
96 Ga0070716_100020477 3300006173 Unclassified 3472
97 Ga0097621_100000127 3300006237 Bacteria 44332
98 Ga0097621_100001799 3300006237 Bacteria 14719
99 Ga0097621_100016877 3300006237 Bacteria 5533
100 Ga0097621_100036881 3300006237 Bacteria 3913
101 Ga0097621_100046550 3300006237 Unclassified 3510
102 Ga0068871_100000261 3300006358 Bacteria 36328
103 Ga0068871_100000279 3300006358 Bacteria 35392
104 Ga0068871_100010932 3300006358 Bacteria 6648
105 Ga0068871_100049985 3300006358 Unclassified 3381
106 Ga0075428_100010953 3300006844 Bacteria 10085
107 Ga0075431_100002112 3300006847 Bacteria 18989
108 Ga0075431_100034399 3300006847 Bacteria 5220
109 Ga0075431_100044323 3300006847 Bacteria 4588
110 Ga0075431_100106633 3300006847 Unclassified 2891
111 Ga0075431_100168991 3300006847 Unclassified 2248
112 Ga0075433_10007477 3300006852 Bacteria 8674
113 Ga0075434_100000848 3300006871 Bacteria 24312
114 Ga0075434_100242257 3300006871 Unclassified 1823
115 Ga0075429_100012070 3300006880 Bacteria 7486
116 Ga0075429_100074587 3300006880 Bacteria 2955
117 Ga0075429_100112512 3300006880 Unclassified 2379
118 Ga0075429_100313217 3300006880 Bacteria 1374
119 Ga0068865_100010709 3300006881 Bacteria 5715
120 Ga0068865_100171156 3300006881 Unclassified 1665
121 Ga0075436_100004561 3300006914 Bacteria 9485
122 Ga0097620_100001599 3300006931 Bacteria 23127
123 Ga0097620_100014638 3300006931 Bacteria 7881
124 Ga0097620_100451688 3300006931 Unclassified 1381
125 Ga0075435_100281102 3300007076 Unclassified 1421
126 Ga0099794_10042557 3300007265 Bacteria 2166
127 Ga0105240_10001253 3300009093 Bacteria 44068
128 Ga0105240_10234985 3300009093 Bacteria 2128
129 Ga0111539_10208504 3300009094 Bacteria 2277
130 Ga0105245_10058822 3300009098 Bacteria 3460
131 Ga0105245_10153967 3300009098 Bacteria 2176
132 Ga0105247_10237431 3300009101 Unclassified 1240
133 Ga0114129_10003331 3300009147 Bacteria 22579
134 Ga0114129_10009997 3300009147 Bacteria 13522
135 Ga0114129_10014405 3300009147 Bacteria 11270
136 Ga0114129_10025087 3300009147 Bacteria 8449
137 Ga0114129_10038519 3300009147 Bacteria 6742
138 Ga0114129_10337310 3300009147 Bacteria 2000
139 Ga0105243_10174337 3300009148 Bacteria 1865
140 Ga0105242_10019612 3300009176 Bacteria 5299
141 Ga0105242_10068885 3300009176 Bacteria 2929
142 Ga0105248_10016121 3300009177 Bacteria 8223
143 Ga0105248_10025103 3300009177 Bacteria 6625
144 Ga0105248_10069647 3300009177 Unclassified 3950
145 Ga0105237_10048044 3300009545 Bacteria 4290
146 Ga0105237_10169847 3300009545 Bacteria 2180
147 Ga0105237_10442762 3300009545 Bacteria 1305
148 Ga0105238_10000143 3300009551 Bacteria 78219
149 Ga0105238_10061233 3300009551 Bacteria 3767
150 Ga0105249_10057510 3300009553 Bacteria 3562
151 Ga0105239_10008099 3300010375 Bacteria 11995
152 Ga0105239_10048683 3300010375 Bacteria 4648
153 Ga0157373_10080817 3300013100 Unclassified 2292
154 Ga0157371_10040411 3300013102 Unclassified 3331
155 Ga0157371_10069370 3300013102 Bacteria 2496
156 Ga0157371_10258074 3300013102 Bacteria 1256
157 Ga0157370_10289647 3300013104 Bacteria 1512
158 Ga0157369_10000102 3300013105 Bacteria 118470
159 Ga0157369_10120573 3300013105 Bacteria 2783
160 Ga0157369_10179635 3300013105 Unclassified 2227
161 Ga0157374_10000097 3300013296 Bacteria 81947
162 Ga0157374_10000262 3300013296 Bacteria 48624
163 Ga0157374_10000523 3300013296 Bacteria 34513
164 Ga0157374_10005222 3300013296 Bacteria 10890
165 Ga0157374_10163192 3300013296 Bacteria 2171
166 Ga0157378_10000104 3300013297 Bacteria 80068
167 Ga0157378_10000254 3300013297 Bacteria 52323
168 Ga0157378_10000283 3300013297 Bacteria 49386
169 Ga0157378_10001294 3300013297 Bacteria 22533
170 Ga0157378_10011724 3300013297 Bacteria 7673
171 Ga0157378_10237314 3300013297 Unclassified 1740
172 Ga0157378_10288306 3300013297 Unclassified 1585
173 Ga0163162_10046709 3300013306 Bacteria 4340
174 Ga0163162_10177669 3300013306 Bacteria 2255
175 Ga0157372_10000322 3300013307 Bacteria 52659
176 Ga0157372_10000340 3300013307 Bacteria 51471
177 Ga0157372_10024148 3300013307 Bacteria 6598
178 Ga0157372_10181566 3300013307 Unclassified 2436
179 Ga0157375_10012877 3300013308 Bacteria 7430
180 Ga0157379_10033126 3300014968 Bacteria 4607
181 Ga0157379_10204838 3300014968 Bacteria 1784
182 Ga0157376_10012081 3300014969 Bacteria 6393
183 Ga0157376_10064710 3300014969 Bacteria 3085
184 Ga0224712_10000312 3300022467 Bacteria 9082
185 Ga0224569_100736 3300022732 Unclassified 2793
186 Ga0224572_1003167 3300024225 Bacteria 2752
187 Ga0228598_1000940 3300024227 Bacteria 6335
188 Ga0228598_1003688 3300024227 Unclassified 3276
189 Ga0207642_10076175 3300025899 Bacteria 1614
190 Ga0207647_10043545 3300025904 Bacteria 2809
191 Ga0207647_10047517 3300025904 Unclassified 2669
192 Ga0207684_10000008 3300025910 Bacteria 601602
193 Ga0207684_10000142 3300025910 Bacteria 127367
194 Ga0207684_10091602 3300025910 Unclassified 2591
195 Ga0207707_10000127 3300025912 Bacteria 78669
196 Ga0207695_10009738 3300025913 Bacteria 11828
197 Ga0207695_10122997 3300025913 Bacteria 2561
198 Ga0207671_10091636 3300025914 Bacteria 2290
199 Ga0207693_10009783 3300025915 Bacteria 7806
200 Ga0207662_10175126 3300025918 Bacteria 1378
201 Ga0207649_10016324 3300025920 Unclassified 4183
202 Ga0207652_10016158 3300025921 Bacteria 6089
203 Ga0207652_10090942 3300025921 Unclassified 2683
204 Ga0207646_10000707 3300025922 Bacteria 43305
205 Ga0207646_10003809 3300025922 Bacteria 16767
206 Ga0207646_10214510 3300025922 Bacteria 1738
207 Ga0207681_10059881 3300025923 Bacteria 2611
208 Ga0207694_10001202 3300025924 Bacteria 22454
209 Ga0207694_10143821 3300025924 Bacteria 1919
210 Ga0207650_10019982 3300025925 Unclassified 4716
211 Ga0207687_10045608 3300025927 Bacteria 3030
212 Ga0207700_10002484 3300025928 Bacteria 10567
213 Ga0207700_10106988 3300025928 Bacteria 2243
214 Ga0207686_10075748 3300025934 Unclassified 2179
215 Ga0207709_10050744 3300025935 Bacteria 2539
216 Ga0207704_10003141 3300025938 Bacteria 7471
217 Ga0207704_10301513 3300025938 Unclassified 1228
218 Ga0207665_10020856 3300025939 Unclassified 4307
219 Ga0207665_10064204 3300025939 Bacteria 2495
220 Ga0207711_10048100 3300025941 Bacteria 3649
221 Ga0207711_10250292 3300025941 Bacteria 1627
222 Ga0207689_10000218 3300025942 Bacteria 50700
223 Ga0207689_10069241 3300025942 Bacteria 2899
224 Ga0207689_10105638 3300025942 Bacteria 2313
225 Ga0207661_10008374 3300025944 Bacteria 7387
226 Ga0207661_10071232 3300025944 Bacteria 2840
227 Ga0207679_10013152 3300025945 Bacteria 5420
228 Ga0207679_10022154 3300025945 Unclassified 4321
229 Ga0207667_10000606 3300025949 Bacteria 46386
230 Ga0207667_10012585 3300025949 Bacteria 9733
231 Ga0207651_10141282 3300025960 Bacteria 1860
232 Ga0207712_10103977 3300025961 Bacteria 2117
233 Ga0207640_10009754 3300025981 Bacteria 5383
234 Ga0207677_10010005 3300026023 Bacteria 5352
235 Ga0207677_10014918 3300026023 Bacteria 4551
236 Ga0207677_10022620 3300026023 Bacteria 3867
237 Ga0207703_10006255 3300026035 Bacteria 9523
238 Ga0207703_10022739 3300026035 Bacteria 4925
239 Ga0207703_10023148 3300026035 Bacteria 4878
240 Ga0207702_10000427 3300026078 Bacteria 48314
241 Ga0207702_10000982 3300026078 Bacteria 29179
242 Ga0207702_10028056 3300026078 Bacteria 4677
243 Ga0207702_10148424 3300026078 Bacteria 2130
244 Ga0207641_10011545 3300026088 Bacteria 7250
245 Ga0207641_10055195 3300026088 Unclassified 3373
246 Ga0207648_10067700 3300026089 Bacteria 3112
247 Ga0207676_10271989 3300026095 Bacteria 1535
248 Ga0207676_10379210 3300026095 Bacteria 1316
249 Ga0207674_10001608 3300026116 Bacteria 29070
250 Ga0207674_10009451 3300026116 Bacteria 11140
251 Ga0207675_100108635 3300026118 Bacteria 2616
252 Ga0207675_100300555 3300026118 Bacteria 1563
253 Ga0207698_10269455 3300026142 Bacteria 1569
254 Ga0209588_1015024 3300027671 Bacteria 2378
255 Ga0207428_10042051 3300027907 Bacteria 3697
256 Ga0268265_10163676 3300028380 Bacteria 1893
257 Ga0268264_10010962 3300028381 Bacteria 7487
258 Ga0265314_10023162 3300031711 Bacteria 4742
259 Ga0373956_0000244 3300035119 Bacteria 21525
260 Ga0373933_0007198 3300035724 Bacteria 6065
261 Ga0373937_0007167 3300036401 Bacteria 9640
262 Ga0395899_0164473 3300037312 Bacteria 1566
263 Ga0395900_0117807 3300037418 Bacteria 2725
264 Ga0395905_0023897 3300037471 Bacteria 5770
265 Ga0436364_1451304 3300037853 Unclassified 1275
266 Ga0495603_0029872 3300046455 Bacteria 3285
267 Ga0495653_0102016 3300046463 Bacteria 2077
268 Ga0495580_0002181 3300046472 Bacteria 17133
269 Ga0495608_0098041 3300046511 Bacteria 1892
270 Ga0495645_0013014 3300046543 Bacteria 5874
271 Ga0495667_0009585 3300046559 Bacteria 6566
272 Ga0495623_0136988 3300046679 Bacteria 1460
273 Ga0495669_0005853 3300046684 Bacteria 5126
274 Ga0495669_0075895 3300046684 Unclassified 1538
275 Ga0495674_0194708 3300047319 Unclassified 1684
276 Ga0495680_0000757 3300047322 Bacteria 36265
277 Ga0495675_0002667 3300047444 Bacteria 10691
278 Ga0495675_0024097 3300047444 Bacteria 3878
279 Ga0496100_0051169 3300048903 Bacteria 2680
280 Ga0496104_0079825 3300048907 Bacteria 3119
281 Ga0496104_0097035 3300048907 Bacteria 2821
282 Ga0496105_0049109 3300048908 Bacteria 3483
283 Ga0496109_0000016 3300048912 Bacteria 212455
284 Ga0496109_0134579 3300048912 Bacteria 2308
285 Ga0496112_0001191 3300048915 Bacteria 19489
286 Ga0496112_0011974 3300048915 Bacteria 7952
287 Ga0496112_0030395 3300048915 Bacteria 5227
288 Ga0501037_0023263 3300049573 Bacteria 4582
289 Ga0501038_0236392 3300049574 Bacteria 1452
290 Ga0501047_0027355 3300049581 Bacteria 5494
291 Ga0501076_0035014 3300049592 Bacteria 3928
292 Ga0501076_0381217 3300049592 Bacteria 1159
293 Ga0501080_0313220 3300049742 Unclassified 1422
294 Ga0501081_0037627 3300049743 Bacteria 3302
295 Ga0501081_0043431 3300049743 Bacteria 3084
296 Ga0501044_0004171 3300049823 Bacteria 16246
297 nmdc:mga05p37_13582_c1 3300050507 Bacteria 9762
298 nmdc:mga05p37_26884_c1 3300050507 Bacteria 7001
299 nmdc:mga05p37_321326_c1 3300050507 Bacteria 1832
300 nmdc:mga05p37_443_c1 3300050507 Bacteria 45028
301 nmdc:mga05p37_70142_c1 3300050507 Bacteria 4311
302 nmdc:mga05p37_7359_c1 3300050507 Bacteria 12983
303 nmdc:mga09592_77418_c1 3300050508 Bacteria 2829
304 nmdc:mga0qj67_240607_c1 3300050509 Bacteria 1468
305 nmdc:mga06r32_180096_c1 3300050510 Bacteria 2099
306 nmdc:mga06r32_200283_c1 3300050510 Unclassified 1984
307 nmdc:mga06r32_2262_c1 3300050510 Bacteria 17215
308 nmdc:mga06r32_40648_c1 3300050510 Bacteria 4416
309 nmdc:mga08y16_43524_c1 3300050511 Bacteria 4706
310 nmdc:mga0n895_2457_c1 3300050512 Bacteria 14486
311 nmdc:mga0n895_416_c1 3300050512 Bacteria 28634
312 nmdc:mga0rr50_225091_c1 3300050513 Unclassified 1550
313 nmdc:mga0rr50_3586_c1 3300050513 Bacteria 8971
314 nmdc:mga08x19_2869_c1 3300050514 Bacteria 10388
315 nmdc:mga0a205_83586_c1 3300050515 Bacteria 3083
316 Ga0500637_0059464 3300053178 Bacteria 2188
317 Ga0501084_0217733 3300054114 Bacteria 1611
318 Ga0501084_0242642 3300054114 Bacteria 1521
319 Ga0530510_0031026 3300061734 Bacteria 3842
320 Ga0495600_0029500
321 Ga0058863_11966074
322 Ga0070683_100010270
323 Ga0070683_100015682
324 Ga0070683_100017766
325 Ga0070670_100016532
326 Ga0068869_100002795
327 Ga0068869_100055957
328 Ga0068869_100075035
329 Ga0070680_100120415
330 Ga0068868_100007045
331 Ga0068868_100014483
332 Ga0068868_100016531
333 Ga0070661_100026326
334 Ga0070669_100029105
335 Ga0070671_100077264
336 Ga0070673_100120933
337 Ga0070673_100211487
338 Ga0070688_100096880
339 Ga0070709_10061886
340 Ga0070714_100202338
341 Ga0070714_100352418
342 Ga0070713_100000741
343 Ga0070705_100016735
344 Ga0070708_100002943
345 Ga0070708_100004559
346 Ga0070708_100011123
347 Ga0070708_100242600
348 Ga0070662_100250031
349 Ga0070681_10000091
350 Ga0070681_10160340
351 Ga0068867_100078378
352 Ga0070706_100000018
353 Ga0070706_100010719
354 Ga0070706_100073601
355 Ga0070707_100002656
356 Ga0070707_100003180
357 Ga0070707_100028962
358 Ga0070698_100000093
359 Ga0070698_100000827
360 Ga0070698_100001376
361 Ga0070698_100014750
362 Ga0070698_100039076
363 Ga0070699_100000858
364 Ga0070699_100001717
365 Ga0070699_100009851
366 Ga0070699_100051128
367 Ga0070699_100139775
368 Ga0070699_100160640
369 Ga0070679_100003555
370 Ga0070679_100101622
371 Ga0070679_100414753
372 Ga0070684_100011488
373 Ga0070697_100000148
374 Ga0070697_100007294
375 Ga0070697_100017632
376 Ga0070697_100025926
377 Ga0068853_100380674
378 Ga0070665_100226622
379 Ga0068855_100001406
380 Ga0068855_100004723
381 Ga0068855_100009433
382 Ga0068855_100136309
383 Ga0070664_100000916
384 Ga0070664_100023927
385 Ga0068857_100002529
386 Ga0068857_100008911
387 Ga0068854_100013595
388 Ga0068854_100094206
389 Ga0068856_100000252
390 Ga0068856_100000685
391 Ga0068856_100001014
392 Ga0070702_100009183
393 Ga0068852_100143409
394 Ga0068859_100001599
395 Ga0068859_100014638
396 Ga0068859_100451653
397 Ga0068864_100004329
398 Ga0068864_100012508
399 Ga0068866_10004641
400 Ga0068861_100077207
401 Ga0068851_10167555
402 Ga0068863_100014009
403 Ga0068863_100101064
404 Ga0068858_100003636
405 Ga0068858_100007458
406 Ga0068858_100012226
407 Ga0068858_100012753
408 Ga0068860_100007366
409 Ga0068860_100008059
410 Ga0068860_100088951
411 Ga0068862_100135358
412 Ga0081455_10007378
413 Ga0081539_10000009
414 Ga0081539_10011732
415 Ga0070716_100020477
416 Ga0097621_100000127
417 Ga0097621_100001799
418 Ga0097621_100016877
419 Ga0097621_100036881
420 Ga0097621_100046550
421 Ga0068871_100000261
422 Ga0068871_100000279
423 Ga0068871_100010932
424 Ga0068871_100049985
425 Ga0075428_100010953
426 Ga0075431_100002112
427 Ga0075431_100034399
428 Ga0075431_100044323
429 Ga0075431_100106633
430 Ga0075431_100168991
431 Ga0075433_10007477
432 Ga0075434_100000848
433 Ga0075434_100242257
434 Ga0075429_100012070
435 Ga0075429_100074587
436 Ga0075429_100112512
437 Ga0075429_100313217
438 Ga0068865_100010709
439 Ga0068865_100171156
440 Ga0075436_100004561
441 Ga0097620_100001599
442 Ga0097620_100014638
443 Ga0097620_100451688
444 Ga0075435_100281102
445 Ga0099794_10042557
446 Ga0105240_10001253
447 Ga0105240_10234985
448 Ga0111539_10208504
449 Ga0105245_10058822
450 Ga0105245_10153967
451 Ga0105247_10237431
452 Ga0114129_10003331
453 Ga0114129_10009997
454 Ga0114129_10014405
455 Ga0114129_10025087
456 Ga0114129_10038519
457 Ga0114129_10337310
458 Ga0105243_10174337
459 Ga0105242_10019612
460 Ga0105242_10068885
461 Ga0105248_10016121
462 Ga0105248_10025103
463 Ga0105248_10069647
464 Ga0105237_10048044
465 Ga0105237_10169847
466 Ga0105237_10442762
467 Ga0105238_10000143
468 Ga0105238_10061233
469 Ga0105249_10057510
470 Ga0105239_10008099
471 Ga0105239_10048683
472 Ga0157373_10080817
473 Ga0157371_10040411
474 Ga0157371_10069370
475 Ga0157371_10258074
476 Ga0157370_10289647
477 Ga0157369_10000102
478 Ga0157369_10120573
479 Ga0157369_10179635
480 Ga0157374_10000097
481 Ga0157374_10000262
482 Ga0157374_10000523
483 Ga0157374_10005222
484 Ga0157374_10163192
485 Ga0157378_10000104
486 Ga0157378_10000254
487 Ga0157378_10000283
488 Ga0157378_10001294
489 Ga0157378_10011724
490 Ga0157378_10237314
491 Ga0157378_10288306
492 Ga0163162_10046709
493 Ga0163162_10177669
494 Ga0157372_10000322
495 Ga0157372_10000340
496 Ga0157372_10024148
497 Ga0157372_10181566
498 Ga0157375_10012877
499 Ga0157379_10033126
500 Ga0157379_10204838
501 Ga0157376_10012081
502 Ga0157376_10064710
503 Ga0224712_10000312
504 Ga0224569_100736
505 Ga0224572_1003167
506 Ga0228598_1000940
507 Ga0228598_1003688
508 Ga0207642_10076175
509 Ga0207647_10043545
510 Ga0207647_10047517
511 Ga0207684_10000008
512 Ga0207684_10000142
513 Ga0207684_10091602
514 Ga0207707_10000127
515 Ga0207695_10009738
516 Ga0207695_10122997
517 Ga0207671_10091636
518 Ga0207693_10009783
519 Ga0207662_10175126
520 Ga0207649_10016324
521 Ga0207652_10016158
522 Ga0207652_10090942
523 Ga0207646_10000707
524 Ga0207646_10003809
525 Ga0207646_10214510
526 Ga0207681_10059881
527 Ga0207694_10001202
528 Ga0207694_10143821
529 Ga0207650_10019982
530 Ga0207687_10045608
531 Ga0207700_10002484
532 Ga0207700_10106988
533 Ga0207686_10075748
534 Ga0207709_10050744
535 Ga0207704_10003141
536 Ga0207704_10301513
537 Ga0207665_10020856
538 Ga0207665_10064204
539 Ga0207711_10048100
540 Ga0207711_10250292
541 Ga0207689_10000218
542 Ga0207689_10069241
543 Ga0207689_10105638
544 Ga0207661_10008374
545 Ga0207661_10071232
546 Ga0207679_10013152
547 Ga0207679_10022154
548 Ga0207667_10000606
549 Ga0207667_10012585
550 Ga0207651_10141282
551 Ga0207712_10103977
552 Ga0207640_10009754
553 Ga0207677_10010005
554 Ga0207677_10014918
555 Ga0207677_10022620
556 Ga0207703_10006255
557 Ga0207703_10022739
558 Ga0207703_10023148
559 Ga0207702_10000427
560 Ga0207702_10000982
561 Ga0207702_10028056
562 Ga0207702_10148424
563 Ga0207641_10011545
564 Ga0207641_10055195
565 Ga0207648_10067700
566 Ga0207676_10271989
567 Ga0207676_10379210
568 Ga0207674_10001608
569 Ga0207674_10009451
570 Ga0207675_100108635
571 Ga0207675_100300555
572 Ga0207698_10269455
573 Ga0209588_1015024
574 Ga0207428_10042051
575 Ga0268265_10163676
576 Ga0268264_10010962
577 Ga0265314_10023162
578 Ga0373956_0000244
579 Ga0373933_0007198
580 Ga0373937_0007167
581 Ga0395899_0164473
582 Ga0395900_0117807
583 Ga0395905_0023897
584 Ga0436364_1451304
585 Ga0495603_0029872
586 Ga0495653_0102016
587 Ga0495580_0002181
588 Ga0495608_0098041
589 Ga0495645_0013014
590 Ga0495667_0009585
591 Ga0495623_0136988
592 Ga0495669_0005853
593 Ga0495669_0075895
594 Ga0495674_0194708
595 Ga0495680_0000757
596 Ga0495675_0002667
597 Ga0495675_0024097
598 Ga0496100_0051169
599 Ga0496104_0079825
600 Ga0496104_0097035
601 Ga0496105_0049109
602 Ga0496109_0000016
603 Ga0496109_0134579
604 Ga0496112_0001191
605 Ga0496112_0011974
606 Ga0496112_0030395
607 Ga0501037_0023263
608 Ga0501038_0236392
609 Ga0501047_0027355
610 Ga0501076_0035014
611 Ga0501076_0381217
612 Ga0501080_0313220
613 Ga0501081_0037627
614 Ga0501081_0043431
615 Ga0501044_0004171
616 nmdc:mga05p37_13582_c1
617 nmdc:mga05p37_26884_c1
618 nmdc:mga05p37_321326_c1
619 nmdc:mga05p37_443_c1
620 nmdc:mga05p37_70142_c1
621 nmdc:mga05p37_7359_c1
622 nmdc:mga09592_77418_c1
623 nmdc:mga0qj67_240607_c1
624 nmdc:mga06r32_180096_c1
625 nmdc:mga06r32_200283_c1
626 nmdc:mga06r32_2262_c1
627 nmdc:mga06r32_40648_c1
628 nmdc:mga08y16_43524_c1
629 nmdc:mga0n895_2457_c1
630 nmdc:mga0n895_416_c1
631 nmdc:mga0rr50_225091_c1
632 nmdc:mga0rr50_3586_c1
633 nmdc:mga08x19_2869_c1
634 nmdc:mga0a205_83586_c1
635 Ga0500637_0059464
636 Ga0501084_0217733
637 Ga0501084_0242642
638 Ga0530510_0031026

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01717

Meth_synt_2

Cobalamin-independent synthase, Catalytic domain

3

340

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
4l6h-assembly1.cif.gz_A crystal structure of the candida albicans methionine synthase in complex with methotrexate and homocysteine 0.8672 2 362
1ypx-assembly1.cif.gz_A crystal structure of the putative vitamin-b12 independent methionine synthase from listeria monocytogenes, northeast structural genomics target lmr13 0.8666 2 360
4l61-assembly1.cif.gz_A crystal structure of the candida albicans methionine synthase in complex with methionine 0.8649 2 357
4l5z-assembly1.cif.gz_A crystal structure of the candida albicans methionine synthase in complex with homocysteine 0.8628 2 362
4l6o-assembly1.cif.gz_A crystal structure of the candida albicans methionine synthase in complex with glutamine 0.8612 2 362
ID Description Score Start End Superfamily
4l61A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.8798 2 357 3.20.20.210
2nq5A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.8795 1 358 3.20.20.210
1ypxA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.8689 2 360 3.20.20.210
af_Q54X49_428_818_3.20.20.210 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.855 2 357 3.20.20.210
1ypxA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.8535 2 360 3.20.20.210
ID Description Score Start End GO Terms
AF-A0A535NN30-F1-model_v4 Methionine synthase 0.9685 4 133 GO:0003871
GO:0008270
GO:0009086
AF-A0A3B8SG15-F1-model_v4 deleted 0.9617 264 359
AF-A0A535SGF8-F1-model_v4 Methionine synthase 0.96 261 360 GO:0003871
GO:0008270
GO:0009086
AF-A0A176UAE8-F1-model_v4 Cobalamin-independent methionine synthase MetE C-terminal/archaeal domain-containing protein 0.9579 257 360 GO:0003871
GO:0008270
GO:0009086
AF-A0A3B8VLP4-F1-model_v4 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 0.9572 256 360 GO:0003871
GO:0008270
GO:0009086
GO:0032259

Map