F404430

General Info

Members Datasets Scaffolds Average Seq Length
318 185 305 784

Family's Representative Sequence

Representative Sequence 3300003323|rootH1_10033179|rootH1_100331794
Length 880
Sequence MSLALKLLTGILILSFPLSAFGWDWQTRVTVVVKDQPIEAVCGLLEKEYGIHFSYSRELVNLSRKVTLTIHQQRLKKVLDELFAPDDIRFARVGEQIVLSPAQRSSRTISGFVKDAVSGENLIGATVYSPVLKQGTTANQYGFYSLTTVKDTNSLVISYIGYQPFVQKVAAKGNQMINIHLQPLGSLKEVVISGKENVKLQEQTQMSKVNLNTSELQAMPRLLGEVDVMRTLQSLPGVSGGSDGAGGLYVRGGGPDQNLVLIDGSPVFNFSHFFGVYSLLNANVVKTTDLYKGAFPARFGGRISSVVDIAMKEGDMKTFHGDASIGLIAAKFNIEGPIVKDRTSFMLSARRSYPDILLNAAMKADNTLGDGGDFQAFFYDINAKVNHIFSTKDRIFLSFYQGEDNLLLKQTVDDTSYASNPSKYVGEKMKFYVGWGNTIAAIRWNHIYGPKLFSNITLNYSQYKFSTEFEHKYTLAASGEKSDVYGRYGSRMANSGGRIDFDYRPDPRHSIRFGAISTMHNFKPGNSVFEDKDSHVTPLDTLAESLKVTGLELSLYAEDNWQIRSDLYASIGLHASGFLVEGRSYFSLQPRLGLRYLLPRSWAVKAAYTHMNQYIHLLSSNGTSLPTDIWVPSTQNVAPMFSKQVAAGVAKTTANGKYEFSLEGYFKSMHNMIESKESNNILAPVETRWDENVTVGKGWSYGAELMLQKKKGSTTGWVGYTLAWSTRRFPGINNGEIYPYRYDTRHDIEVVLVQQLGPHWELSASWHFNSGLPFTLPVSTYAGTEGASPWEPGTGNTGIDRYDNWNNYRGAAIHRLDMGITWSRQKKRWSRSWNLSVFNVYNRKNPYYYYISADPVQQQRYLSKVTILPILPSITYAIKF

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
3 2738541278 Niastella sp. CF465 Isolate Unclassified
4 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
5 2881955468 Edaphocola flava HME-24 Isolate Rhizosphere
6 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
7 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
8 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
9 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
10 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
11 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
12 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
13 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
14 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
15 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
16 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
17 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
18 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
19 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
20 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
21 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
22 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
23 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
24 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
25 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
26 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
27 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
28 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
29 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
30 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
31 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
32 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
33 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
34 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
35 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
36 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
37 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
38 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
39 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
40 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
41 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
42 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
43 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
44 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
45 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
46 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
47 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
48 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
49 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
50 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
51 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
52 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
53 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
54 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
55 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
56 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
57 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
58 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
59 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
60 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
61 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
62 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
63 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
64 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
65 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
66 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
67 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
68 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
69 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
70 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
71 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
72 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
73 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
74 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
75 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
76 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
77 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
78 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
79 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
80 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
81 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
82 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
83 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
84 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
85 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
86 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
87 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
88 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
89 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
90 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
91 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
92 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
93 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
94 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
133 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
134 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
135 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
136 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
137 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
138 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
139 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
140 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
141 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
142 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
143 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
144 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
145 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
146 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
147 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
148 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
149 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
150 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
151 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
152 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
153 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
154 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
155 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
167 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
168 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
169 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
170 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
171 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
172 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
173 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
174 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
175 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
176 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
178 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
179 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
180 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
181 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
182 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
183 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
184 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
185 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.23
Metatranscriptomes 0
Isolates 3.77

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.6
Nodule 0
Rhizoplane 0
Rhizosphere 87.11
Stem 0
Stem Tuber 0
Unclassified 6.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1663050 2162886007 Bacteria 482194
2 SwRhRL2b_contig_2879104 2162886007 Bacteria 104588
3 JGI25406J46586_10001952 3300003203 Bacteria 9747
4 rootH1_10005135 3300003316 Bacteria 10625
5 rootH2_10076622 3300003320 Bacteria 4944
6 rootL2_10058344 3300003322 Bacteria 4851
7 rootH1_10010466 3300003323 Bacteria 53551
8 rootH1_10024340 3300003323 Bacteria 10425
9 rootH1_10033179 3300003316 Bacteria 2663
10 rootH1_10033179 3300003323 Bacteria 11985
11 rootH1_10063907 3300003323 Bacteria 24298
12 rootH1_10119426 3300003323 Bacteria 5380
13 JGI25160J50197_1001246 3300003354 Bacteria 12911
14 Ga0055536_1003644 3300003781 Bacteria 8204
15 Ga0055531_10000409 3300003794 Bacteria 41322
16 Ga0055531_10000419 3300003794 Bacteria 40427
17 Ga0065165_1000083 3300005262 Bacteria 156204
18 Ga0065704_10070133 3300005289 Bacteria 1266035
19 Ga0065704_10070140 3300005289 Bacteria 482257
20 Ga0070658_10000483 3300005327 Bacteria 34634
21 Ga0070676_10000561 3300005328 Bacteria 17976
22 Ga0070683_100095902 3300005329 Bacteria 2789
23 Ga0070690_100039012 3300005330 Bacteria 2999
24 Ga0070670_100006902 3300005331 Bacteria 9621
25 Ga0070666_10000024 3300005335 Bacteria 161355
26 Ga0070666_10000201 3300005335 Bacteria 40907
27 Ga0070680_100000723 3300005336 Bacteria 22989
28 Ga0070682_100000161 3300005337 Bacteria 51245
29 Ga0070682_100002283 3300005337 Bacteria 10608
30 Ga0068868_100000437 3300005338 Bacteria 28070
31 Ga0068868_100008289 3300005338 Bacteria 7442
32 Ga0068868_100033813 3300005338 Unclassified 3944
33 Ga0070660_100008301 3300005339 Bacteria 7259
34 Ga0070691_10000288 3300005341 Bacteria 17572
35 Ga0070668_100000638 3300005347 Bacteria 23600
36 Ga0070675_100009570 3300005354 Bacteria 7541
37 Ga0070671_100007461 3300005355 Bacteria 8741
38 Ga0070671_100048687 3300005355 Bacteria 3526
39 Ga0070674_100048382 3300005356 Bacteria 2918
40 Ga0070673_100000131 3300005364 Bacteria 35410
41 Ga0070673_100014578 3300005364 Bacteria 5482
42 Ga0070673_100030621 3300005364 Bacteria 4030
43 Ga0070659_100018184 3300005366 Bacteria 5303
44 Ga0070659_100023450 3300005366 Bacteria 4722
45 Ga0070667_100000393 3300005367 Bacteria 47271
46 Ga0070667_100003545 3300005367 Bacteria 13300
47 Ga0070678_100002338 3300005456 Bacteria 10353
48 Ga0070662_100007229 3300005457 Bacteria 7195
49 Ga0070681_10004084 3300005458 Bacteria 13790
50 Ga0068867_100002657 3300005459 Bacteria 12618
51 Ga0070685_10017102 3300005466 Bacteria 3876
52 Ga0070698_100031216 3300005471 Bacteria 5524
53 Ga0070698_100089985 3300005471 Bacteria 3053
54 Ga0070679_100001137 3300005530 Bacteria 23248
55 Ga0068853_100010317 3300005539 Bacteria 7555
56 Ga0068853_100019687 3300005539 Bacteria 5602
57 Ga0070672_100000460 3300005543 Bacteria 23628
58 Ga0070665_100000920 3300005548 Bacteria 37726
59 Ga0070665_100013292 3300005548 Bacteria 8288
60 Ga0068855_100021241 3300005563 Bacteria 7783
61 Ga0070664_100000624 3300005564 Bacteria 27096
62 Ga0068852_100042651 3300005616 Bacteria 3842
63 Ga0068859_100000041 3300005617 Bacteria 162415
64 Ga0068859_100008841 3300005617 Bacteria 10173
65 Ga0068859_100011928 3300005617 Bacteria 8730
66 Ga0068864_100000924 3300005618 Bacteria 24645
67 Ga0068864_100001016 3300005618 Bacteria 23453
68 Ga0068864_100027224 3300005618 Bacteria 4825
69 Ga0068851_10001798 3300005834 Bacteria 9389
70 Ga0068870_10002453 3300005840 Bacteria 7725
71 Ga0068863_100000953 3300005841 Bacteria 29004
72 Ga0068863_100008107 3300005841 Bacteria 10252
73 Ga0068863_100058192 3300005841 Bacteria 3658
74 Ga0068858_100000787 3300005842 Bacteria 33141
75 Ga0068860_100000397 3300005843 Bacteria 57001
76 Ga0068860_100001158 3300005843 Bacteria 28819
77 Ga0068860_100009100 3300005843 Bacteria 9883
78 Ga0081539_10001653 3300005985 Bacteria 36134
79 Ga0097621_100008626 3300006237 Bacteria 7352
80 Ga0068871_100003708 3300006358 Bacteria 10506
81 Ga0068871_100004414 3300006358 Bacteria 9780
82 Ga0068871_100014836 3300006358 Bacteria 5820
83 Ga0068871_100015151 3300006358 Bacteria 5764
84 Ga0075428_100052418 3300006844 Bacteria 4472
85 Ga0075429_100017487 3300006880 Bacteria 6199
86 Ga0075429_100031175 3300006880 Unclassified 4634
87 Ga0068865_100001733 3300006881 Bacteria 12812
88 Ga0097620_100000041 3300006931 Bacteria 162415
89 Ga0097620_100008841 3300006931 Bacteria 10173
90 Ga0097620_100011928 3300006931 Bacteria 8730
91 Ga0105240_10000037 3300009093 Bacteria 270462
92 Ga0105240_10016317 3300009093 Bacteria 10060
93 Ga0105240_10033623 3300009093 Bacteria 6621
94 Ga0111539_10133050 3300009094 Unclassified 2912
95 Ga0111539_10151250 3300009094 Unclassified 2717
96 Ga0105247_10024536 3300009101 Bacteria 3634
97 Ga0114129_10061700 3300009147 Bacteria 5239
98 Ga0105241_10000113 3300009174 Bacteria 58135
99 Ga0105241_10001094 3300009174 Bacteria 20630
100 Ga0105242_10016253 3300009176 Bacteria 5785
101 Ga0105248_10021248 3300009177 Bacteria 7191
102 Ga0105237_10005347 3300009545 Bacteria 14529
103 Ga0105237_10064583 3300009545 Bacteria 3656
104 Ga0105249_10002286 3300009553 Bacteria 16645
105 Ga0105249_10015700 3300009553 Bacteria 6705
106 Ga0105249_10017794 3300009553 Bacteria 6314
107 Ga0105239_10000606 3300010375 Bacteria 51062
108 Ga0105239_10141082 3300010375 Unclassified 2685
109 Ga0157373_10006134 3300013100 Bacteria 8987
110 Ga0157370_10001108 3300013104 Bacteria 33740
111 Ga0157370_10017671 3300013104 Bacteria 7189
112 Ga0157370_10063551 3300013104 Bacteria 3496
113 Ga0157374_10001246 3300013296 Bacteria 21704
114 Ga0157378_10000599 3300013297 Bacteria 33802
115 Ga0157378_10029531 3300013297 Bacteria 4841
116 Ga0163162_10000040 3300013306 Bacteria 133855
117 Ga0163162_10002847 3300013306 Bacteria 16472
118 Ga0163162_10006530 3300013306 Bacteria 11298
119 Ga0163162_10061822 3300013306 Bacteria 3783
120 Ga0157372_10003238 3300013307 Bacteria 17593
121 Ga0157372_10012884 3300013307 Bacteria 8915
122 Ga0157372_10019681 3300013307 Bacteria 7274
123 Ga0157372_10024937 3300013307 Bacteria 6500
124 Ga0157375_10000270 3300013308 Bacteria 47166
125 Ga0163163_10000110 3300014325 Bacteria 87033
126 Ga0163163_10002402 3300014325 Bacteria 15845
127 Ga0157380_10000038 3300014326 Bacteria 78487
128 Ga0157380_10001140 3300014326 Bacteria 17170
129 Ga0157380_10042993 3300014326 Bacteria 3535
130 Ga0157377_10017689 3300014745 Bacteria 3691
131 Ga0157379_10000227 3300014968 Bacteria 44156
132 Ga0157379_10027504 3300014968 Bacteria 5064
133 Ga0157376_10000161 3300014969 Bacteria 46915
134 Ga0157376_10003186 3300014969 Bacteria 11279
135 Ga0157376_10089258 3300014969 Unclassified 2665
136 Ga0213876_10008270 3300021384 Bacteria 5629
137 Ga0209436_100254 3300025208 Bacteria 24604
138 Ga0209676_1001359 3300025292 Bacteria 24135
139 Ga0207426_1000009 3300025302 Bacteria 797229
140 Ga0207426_1000243 3300025302 Bacteria 122575
141 Ga0209257_1000007 3300025304 Bacteria 1564415
142 Ga0207710_10012047 3300025900 Bacteria 3634
143 Ga0207688_10005369 3300025901 Bacteria 6961
144 Ga0207680_10000151 3300025903 Bacteria 33591
145 Ga0207680_10000852 3300025903 Bacteria 14391
146 Ga0207647_10000689 3300025904 Bacteria 26518
147 Ga0207645_10000625 3300025907 Bacteria 29328
148 Ga0207645_10000651 3300025907 Bacteria 28863
149 Ga0207643_10005169 3300025908 Bacteria 6978
150 Ga0207705_10002217 3300025909 Bacteria 14997
151 Ga0207654_10002698 3300025911 Bacteria 9013
152 Ga0207654_10005925 3300025911 Bacteria 6151
153 Ga0207707_10000189 3300025912 Bacteria 65118
154 Ga0207695_10000092 3300025913 Bacteria 270514
155 Ga0207695_10005298 3300025913 Bacteria 17190
156 Ga0207671_10008917 3300025914 Bacteria 8446
157 Ga0207660_10000643 3300025917 Bacteria 23516
158 Ga0207657_10004521 3300025919 Bacteria 14694
159 Ga0207652_10000755 3300025921 Bacteria 31094
160 Ga0207681_10013168 3300025923 Bacteria 5114
161 Ga0207650_10007342 3300025925 Bacteria 7503
162 Ga0207659_10032801 3300025926 Bacteria 3568
163 Ga0207644_10029880 3300025931 Bacteria 3783
164 Ga0207690_10022695 3300025932 Unclassified 3907
165 Ga0207706_10014122 3300025933 Bacteria 7241
166 Ga0207706_10027491 3300025933 Bacteria 5086
167 Ga0207686_10000403 3300025934 Bacteria 30043
168 Ga0207669_10003571 3300025937 Bacteria 6743
169 Ga0207669_10029470 3300025937 Bacteria 3036
170 Ga0207691_10000013 3300025940 Bacteria 147349
171 Ga0207691_10008935 3300025940 Bacteria 9614
172 Ga0207691_10012343 3300025940 Bacteria 8189
173 Ga0207691_10032448 3300025940 Bacteria 4868
174 Ga0207689_10011051 3300025942 Bacteria 7758
175 Ga0207689_10016360 3300025942 Bacteria 6281
176 Ga0207689_10017417 3300025942 Bacteria 6079
177 Ga0207689_10019768 3300025942 Bacteria 5674
178 Ga0207689_10020176 3300025942 Bacteria 5614
179 Ga0207689_10023273 3300025942 Bacteria 5201
180 Ga0207689_10038075 3300025942 Bacteria 3984
181 Ga0207679_10002532 3300025945 Bacteria 11263
182 Ga0207667_10034565 3300025949 Bacteria 5427
183 Ga0207667_10067550 3300025949 Bacteria 3724
184 Ga0207667_10068400 3300025949 Bacteria 3698
185 Ga0207651_10000152 3300025960 Bacteria 30222
186 Ga0207651_10028172 3300025960 Bacteria 3540
187 Ga0207651_10035830 3300025960 Bacteria 3232
188 Ga0207668_10000317 3300025972 Bacteria 31387
189 Ga0207658_10000707 3300025986 Bacteria 28907
190 Ga0207658_10021657 3300025986 Bacteria 4465
191 Ga0207677_10000441 3300026023 Bacteria 28085
192 Ga0207703_10001988 3300026035 Bacteria 18032
193 Ga0207641_10000331 3300026088 Bacteria 57928
194 Ga0207641_10000369 3300026088 Bacteria 53464
195 Ga0207641_10002996 3300026088 Bacteria 15255
196 Ga0207648_10007216 3300026089 Bacteria 10957
197 Ga0207648_10013308 3300026089 Bacteria 7662
198 Ga0207676_10001843 3300026095 Bacteria 15536
199 Ga0207676_10035212 3300026095 Unclassified 3798
200 Ga0207675_100053656 3300026118 Bacteria 3761
201 Ga0207683_10000304 3300026121 Bacteria 44491
202 Ga0207683_10006678 3300026121 Bacteria 9872
203 Ga0207683_10035608 3300026121 Bacteria 4330
204 Ga0268266_10001314 3300028379 Bacteria 30153
205 Ga0307515_10000001 3300028794 Bacteria 4259510
206 Ga0307515_10000677 3300028794 Bacteria 78511
207 Ga0265327_10000009 3300031251 Bacteria 616360
208 Ga0265327_10000054 3300031251 Bacteria 250337
209 Ga0265327_10000476 3300031251 Bacteria 70725
210 Ga0307509_10020321 3300031507 Bacteria 7534
211 Ga0307408_100000080 3300031548 Bacteria 107681
212 Ga0316576_10015201 3300031727 Bacteria 5160
213 Ga0316576_10029592 3300031727 Bacteria 3873
214 Ga0307405_10002730 3300031731 Bacteria 7902
215 Ga0395900_0050902 3300037418 Bacteria 4266
216 Ga0395905_0000003 3300037471 Bacteria 1347396
217 Ga0395905_0000494 3300037471 Bacteria 54156
218 Ga0395905_0000601 3300037471 Bacteria 48125
219 Ga0400483_001510 3300039062 Bacteria 11371
220 Ga0436365_0467612 3300039437 Bacteria 11876
221 Ga0439436_0001689 3300041404 Bacteria 6455
222 Ga0451577_0000222 3300042876 Bacteria 116801
223 Ga0451577_0000715 3300042876 Bacteria 51599
224 Ga0451577_0019490 3300042876 Bacteria 6238
225 Ga0451577_0025385 3300042876 Bacteria 5376
226 Ga0466969_0001691 3300044656 Bacteria 11789
227 Ga0466972_0000006 3300044658 Bacteria 282264
228 Ga0466972_0000108 3300044658 Bacteria 71610
229 Ga0466972_0000396 3300044658 Bacteria 23138
230 Ga0453683_0013045 3300044673 Bacteria 5433
231 Ga0466966_0000389 3300044684 Bacteria 28532
232 Ga0453684_0000167 3300044712 Bacteria 290200
233 Ga0453684_0000199 3300044712 Bacteria 264155
234 Ga0453684_0000527 3300044712 Bacteria 146072
235 Ga0453684_0004822 3300044712 Bacteria 27711
236 Ga0453684_0004882 3300044712 Bacteria 27467
237 Ga0453684_0006313 3300044712 Bacteria 22631
238 Ga0453684_0006438 3300044712 Bacteria 22302
239 Ga0453684_0008315 3300044712 Bacteria 18679
240 Ga0453684_0019561 3300044712 Bacteria 10294
241 Ga0453684_0037204 3300044712 Bacteria 6684
242 Ga0453684_0044085 3300044712 Bacteria 5978
243 Ga0453684_0055124 3300044712 Bacteria 5171
244 Ga0453684_0105015 3300044712 Bacteria 3447
245 Ga0466970_0003247 3300044765 Bacteria 7905
246 Ga0466959_0000025 3300045049 Bacteria 120128
247 Ga0451576_0000015 3300045051 Bacteria 579908
248 Ga0451576_0000211 3300045051 Bacteria 146199
249 Ga0451576_0002331 3300045051 Bacteria 28724
250 Ga0451576_0006415 3300045051 Bacteria 14430
251 Ga0451576_0007340 3300045051 Bacteria 13221
252 Ga0495592_0015281 3300046454 Bacteria 5826
253 Ga0495668_0003904 3300046616 Bacteria 10888
254 Ga0495668_0005919 3300046616 Bacteria 8137
255 Ga0495636_0000047 3300047318 Bacteria 52861
256 Ga0501031_0000269 3300049568 Bacteria 29394
257 Ga0501031_0074362 3300049568 Bacteria 2212
258 Ga0501032_0002463 3300049569 Bacteria 14466
259 Ga0501032_0005186 3300049569 Bacteria 9709
260 Ga0501032_0009991 3300049569 Bacteria 6854
261 Ga0501033_0002078 3300049570 Bacteria 17387
262 Ga0501034_0000017 3300049571 Bacteria 285938
263 Ga0501034_0000394 3300049571 Bacteria 73866
264 Ga0501034_0098970 3300049571 Bacteria 2911
265 Ga0501034_0108993 3300049571 Bacteria 2760
266 Ga0501036_0026287 3300049572 Bacteria 4912
267 Ga0501037_0013837 3300049573 Bacteria 5945
268 Ga0501037_0015765 3300049573 Bacteria 5560
269 Ga0501038_0002609 3300049574 Bacteria 16857
270 Ga0501038_0039951 3300049574 Bacteria 4101
271 Ga0501039_0000891 3300049575 Bacteria 21736
272 Ga0501043_0000678 3300049579 Bacteria 29963
273 Ga0501043_0010400 3300049579 Bacteria 7291
274 Ga0501046_0007864 3300049580 Bacteria 9352
275 Ga0501047_0037783 3300049581 Bacteria 4669
276 Ga0501047_0059739 3300049581 Bacteria 3681
277 Ga0501073_0019970 3300049589 Bacteria 4831
278 Ga0501202_000620 3300049652 Bacteria 5213
279 Ga0501202_001990 3300049652 Bacteria 3373
280 Ga0501206_001620 3300049653 Unclassified 2815
281 Ga0501243_000673 3300049675 Unclassified 4689
282 Ga0501257_002779 3300049686 Bacteria 3702
283 Ga0501259_000320 3300049688 Bacteria 7630
284 Ga0501219_000210 3300049703 Bacteria 10960
285 Ga0501225_0000418 3300049705 Bacteria 13390
286 Ga0501225_0002527 3300049705 Bacteria 5657
287 Ga0501083_0010194 3300049744 Bacteria 6622
288 Ga0501035_0005062 3300049822 Bacteria 12491
289 Ga0501035_0070854 3300049822 Bacteria 3087
290 Ga0501044_0003523 3300049823 Bacteria 17620
291 Ga0501044_0007422 3300049823 Bacteria 12060
292 Ga0501044_0012087 3300049823 Bacteria 9352
293 Ga0501044_0036349 3300049823 Bacteria 5153
294 Ga0501045_0000227 3300049824 Bacteria 32581
295 Ga0501284_00053 3300050005 Bacteria 42774
296 nmdc:mga0k408_39178_c1 3300050493 Bacteria 2722
297 nmdc:mga05p37_24173_c2 3300050507 Bacteria 5250
298 Ga0500578_0000315 3300053086 Bacteria 59398
299 Ga0500646_0004667 3300053090 Bacteria 3465
300 Ga0500583_0000017 3300053092 Bacteria 141647
301 Ga0500583_0000032 3300053092 Bacteria 102260
302 Ga0500583_0000234 3300053092 Bacteria 19954
303 Ga0500583_0000622 3300053092 Bacteria 10555
304 Ga0500650_0019328 3300053098 Bacteria 2971
305 Ga0500622_0001148 3300053156 Bacteria 22028

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049568 Ga0501031_0074362 Ga0501031_0074362_82_2178 669
2 3300014745 Ga0157377_10017689 Ga0157377_100176893 674
3 3300037471 Ga0395905_0000601 Ga0395905_0000601_39785_42022 685
4 3300003323 rootH1_10119426 rootH1_101194264 689
5 3300045051 Ga0451576_0000015 Ga0451576_0000015_214555_216900 694
6 3300003323 rootH1_10024340 rootH1_100243402 699
7 3300003323 rootH1_10010466 rootH1_1001046641 702
8 3300039062 Ga0400483_001510 Ga0400483_001510_2700_5117 704
9 3300031251 Ga0265327_10000009 Ga0265327_10000009210 705
10 3300044712 Ga0453684_0019561 Ga0453684_0019561_3388_5778 708
11 3300045051 Ga0451576_0007340 Ga0451576_0007340_521_2911 708
12 iso_pu_bacteria 2911138879 2911143916 708
13 3300009094 Ga0111539_10133050 Ga0111539_101330502 709
14 3300031548 Ga0307408_100000080 Ga0307408_10000008075 709
15 iso_pu_bacteria 2884791551 2884797506 709
16 3300025942 Ga0207689_10017417 Ga0207689_100174172 710
17 3300003794 Ga0055531_10000409 Ga0055531_100004096 711
18 3300025304 Ga0209257_1000007 Ga0209257_1000007346 711
19 3300044712 Ga0453684_0004882 Ga0453684_0004882_15721_18087 712
20 3300003794 Ga0055531_10000419 Ga0055531_1000041919 713
21 3300025304 Ga0209257_1000007 Ga0209257_10000071158 713
22 3300031507 Ga0307509_10020321 Ga0307509_100203218 713
23 3300003320 rootH2_10076622 rootH2_100766223 714
24 3300044673 Ga0453683_0013045 Ga0453683_0013045_1866_4292 715
25 3300044712 Ga0453684_0006313 Ga0453684_0006313_18023_20410 715
26 3300045051 Ga0451576_0006415 Ga0451576_0006415_2957_5305 716
27 3300046616 Ga0495668_0005919 Ga0495668_0005919_2875_5262 716
28 3300053156 Ga0500622_0001148 Ga0500622_0001148_10678_13281 716
29 2162886007 SwRhRL2b_contig_2879104 SwRhRL2b_0102.00000100 717
30 3300005289 Ga0065704_10070133 Ga0065704_10070133509 717
31 3300005354 Ga0070675_100009570 Ga0070675_1000095703 717
32 3300037418 Ga0395900_0050902 Ga0395900_0050902_1764_4115 717
33 3300037471 Ga0395905_0000494 Ga0395905_0000494_8553_10904 717
34 3300042876 Ga0451577_0000715 Ga0451577_0000715_47989_50379 717
35 3300042876 Ga0451577_0019490 Ga0451577_0019490_915_3308 717
36 3300044712 Ga0453684_0000167 Ga0453684_0000167_193530_195914 717
37 3300044712 Ga0453684_0000199 Ga0453684_0000199_106721_109114 717
38 3300044712 Ga0453684_0000527 Ga0453684_0000527_102166_104556 717
39 3300044712 Ga0453684_0008315 Ga0453684_0008315_9728_12367 717
40 3300045051 Ga0451576_0000211 Ga0451576_0000211_102166_104556 717
41 3300053156 Ga0500622_0001148 Ga0500622_0001148_7088_9688 717
42 iso_pu_bacteria 2929921140 2929926647 717
43 3300014326 Ga0157380_10042993 Ga0157380_100429932 719
44 3300042876 Ga0451577_0000222 Ga0451577_0000222_89623_91977 719
45 3300049581 Ga0501047_0059739 Ga0501047_0059739_1162_3474 719
46 iso_pu_bacteria 2522125168 2522549817 719
47 iso_pu_bacteria 2818991460 2819677586 719
48 3300044712 Ga0453684_0044085 Ga0453684_0044085_898_3321 720
49 iso_pu_bacteria 2929177148 2929183421 720
50 iso_pu_bacteria 2945977869 2945979382 720
51 iso_pu_bacteria 2946013367 2946014748 720
52 3300003316 rootH1_10005135 rootH1_100051354 721
53 3300013297 Ga0157378_10029531 Ga0157378_100295313 721
54 3300031727 Ga0316576_10029592 Ga0316576_100295922 721
55 3300044712 Ga0453684_0004822 Ga0453684_0004822_14456_16828 721
56 3300044712 Ga0453684_0105015 Ga0453684_0105015_530_2884 721
57 3300045051 Ga0451576_0002331 Ga0451576_0002331_14414_16855 721
58 3300049568 Ga0501031_0000269 Ga0501031_0000269_13746_16115 721
59 3300049569 Ga0501032_0002463 Ga0501032_0002463_7816_10185 721
60 3300049570 Ga0501033_0002078 Ga0501033_0002078_10458_12827 721
61 3300049571 Ga0501034_0000394 Ga0501034_0000394_3138_5507 721
62 3300049573 Ga0501037_0015765 Ga0501037_0015765_2960_5329 721
63 3300049574 Ga0501038_0002609 Ga0501038_0002609_11164_13533 721
64 3300049575 Ga0501039_0000891 Ga0501039_0000891_15170_17539 721
65 3300049579 Ga0501043_0000678 Ga0501043_0000678_23719_26088 721
66 3300049822 Ga0501035_0005062 Ga0501035_0005062_6752_9121 721
67 3300049823 Ga0501044_0003523 Ga0501044_0003523_4216_6585 721
68 3300049824 Ga0501045_0000227 Ga0501045_0000227_4250_6619 721
69 3300003323 rootH1_10033179 rootH1_100331794 722
70 3300005356 Ga0070674_100048382 Ga0070674_1000483822 722
71 3300009094 Ga0111539_10151250 Ga0111539_101512502 722
72 3300025208 Ga0209436_100254 Ga0209436_10025419 722
73 3300025302 Ga0207426_1000243 Ga0207426_100024331 722
74 3300025926 Ga0207659_10032801 Ga0207659_100328012 722
75 3300025940 Ga0207691_10008935 Ga0207691_100089353 722
76 iso_pu_bacteria 2910245624 2910246922 722
77 3300003781 Ga0055536_1003644 Ga0055536_10036449 723
78 3300005262 Ga0065165_1000083 Ga0065165_1000083123 723
79 3300025292 Ga0209676_1001359 Ga0209676_10013596 723
80 3300031731 Ga0307405_10002730 Ga0307405_100027308 723
81 3300005617 Ga0068859_100011928 Ga0068859_1000119286 725
82 3300006931 Ga0097620_100011928 Ga0097620_1000119283 725
83 3300013104 Ga0157370_10063551 Ga0157370_100635512 725
84 iso_pu_bacteria 2818991460 2819681568 726
85 3300049686 Ga0501257_002779 Ga0501257_002779_859_3210 727
86 3300031727 Ga0316576_10015201 Ga0316576_100152014 728
87 3300044658 Ga0466972_0000396 Ga0466972_0000396_8632_11019 730
88 3300053090 Ga0500646_0004667 Ga0500646_0004667_545_2932 730
89 3300053092 Ga0500583_0000032 Ga0500583_0000032_47926_50313 730
90 3300053092 Ga0500583_0000234 Ga0500583_0000234_12257_14644 730
91 3300005618 Ga0068864_100027224 Ga0068864_1000272244 732
92 3300014969 Ga0157376_10089258 Ga0157376_100892581 732
93 3300049823 Ga0501044_0007422 Ga0501044_0007422_2841_5192 732
94 3300005337 Ga0070682_100000161 Ga0070682_10000016123 734
95 3300025942 Ga0207689_10023273 Ga0207689_100232733 734
96 3300044712 Ga0453684_0037204 Ga0453684_0037204_1134_3482 734
97 3300013307 Ga0157372_10024937 Ga0157372_100249376 735
98 3300005338 Ga0068868_100033813 Ga0068868_1000338132 736
99 3300005366 Ga0070659_100023450 Ga0070659_1000234502 736
100 3300005471 Ga0070698_100089985 Ga0070698_1000899852 736
101 3300005564 Ga0070664_100000624 Ga0070664_1000006246 736
102 3300025945 Ga0207679_10002532 Ga0207679_100025326 736
103 3300025960 Ga0207651_10028172 Ga0207651_100281723 736
104 3300003323 rootH1_10063907 rootH1_1006390715 737
105 3300009545 Ga0105237_10064583 Ga0105237_100645831 737
106 3300044712 Ga0453684_0006438 Ga0453684_0006438_3817_6213 737
107 3300044712 Ga0453684_0055124 Ga0453684_0055124_2478_4781 737
108 3300049688 Ga0501259_000320 Ga0501259_000320_2084_4399 737
109 3300049705 Ga0501225_0000418 Ga0501225_0000418_3245_5596 737
110 3300053098 Ga0500650_0019328 Ga0500650_0019328_196_2547 737
111 3300005466 Ga0070685_10017102 Ga0070685_100171022 738
112 3300041404 Ga0439436_0001689 Ga0439436_0001689_785_3133 738
113 3300046454 Ga0495592_0015281 Ga0495592_0015281_1801_4188 738
114 3300050507 nmdc:mga05p37_24173_c2 nmdc:mga05p37_24173_c2_602_2905 738
115 3300005456 Ga0070678_100002338 Ga0070678_1000023389 740
116 3300005471 Ga0070698_100031216 Ga0070698_1000312163 740
117 3300005548 Ga0070665_100013292 Ga0070665_1000132923 740
118 3300005617 Ga0068859_100008841 Ga0068859_1000088416 740
119 3300005840 Ga0068870_10002453 Ga0068870_100024535 740
120 3300006880 Ga0075429_100017487 Ga0075429_1000174875 740
121 3300006931 Ga0097620_100008841 Ga0097620_1000088416 740
122 3300025907 Ga0207645_10000651 Ga0207645_1000065114 740
123 3300025908 Ga0207643_10005169 Ga0207643_100051692 740
124 3300025923 Ga0207681_10013168 Ga0207681_100131681 740
125 3300025940 Ga0207691_10012343 Ga0207691_100123436 740
126 3300025942 Ga0207689_10016360 Ga0207689_100163603 740
127 3300025960 Ga0207651_10035830 Ga0207651_100358302 740
128 3300026089 Ga0207648_10007216 Ga0207648_100072165 740
129 3300026118 Ga0207675_100053656 Ga0207675_1000536561 740
130 3300026121 Ga0207683_10000304 Ga0207683_1000030432 740
131 3300028794 Ga0307515_10000677 Ga0307515_1000067731 740
132 3300049652 Ga0501202_001990 Ga0501202_001990_596_2905 740
133 3300006844 Ga0075428_100052418 Ga0075428_1000524184 741
134 3300049703 Ga0501219_000210 Ga0501219_000210_5252_7567 742
135 3300050005 Ga0501284_00053 Ga0501284_00053_6154_8469 742
136 3300005331 Ga0070670_100006902 Ga0070670_1000069027 743
137 3300009553 Ga0105249_10015700 Ga0105249_100157004 743
138 3300025925 Ga0207650_10007342 Ga0207650_100073425 743
139 3300005327 Ga0070658_10000483 Ga0070658_1000048327 744
140 3300005328 Ga0070676_10000561 Ga0070676_100005617 744
141 3300005335 Ga0070666_10000201 Ga0070666_1000020133 744
142 3300005338 Ga0068868_100000437 Ga0068868_10000043711 744
143 3300005347 Ga0070668_100000638 Ga0070668_1000006384 744
144 3300005364 Ga0070673_100000131 Ga0070673_10000013110 744
145 3300005367 Ga0070667_100000393 Ga0070667_10000039335 744
146 3300005457 Ga0070662_100007229 Ga0070662_1000072295 744
147 3300005459 Ga0068867_100002657 Ga0068867_1000026578 744
148 3300005543 Ga0070672_100000460 Ga0070672_1000004606 744
149 3300005548 Ga0070665_100000920 Ga0070665_10000092010 744
150 3300005563 Ga0068855_100021241 Ga0068855_1000212412 744
151 3300005618 Ga0068864_100001016 Ga0068864_1000010169 744
152 3300005834 Ga0068851_10001798 Ga0068851_100017985 744
153 3300005841 Ga0068863_100000953 Ga0068863_10000095319 744
154 3300005842 Ga0068858_100000787 Ga0068858_1000007872 744
155 3300005843 Ga0068860_100000397 Ga0068860_10000039710 744
156 3300006358 Ga0068871_100004414 Ga0068871_1000044145 744
157 3300006881 Ga0068865_100001733 Ga0068865_1000017334 744
158 3300009177 Ga0105248_10021248 Ga0105248_100212485 744
159 3300009553 Ga0105249_10017794 Ga0105249_100177943 744
160 3300013296 Ga0157374_10001246 Ga0157374_100012466 744
161 3300013306 Ga0163162_10000040 Ga0163162_1000004038 744
162 3300013307 Ga0157372_10012884 Ga0157372_100128845 744
163 3300013308 Ga0157375_10000270 Ga0157375_1000027022 744
164 3300014325 Ga0163163_10000110 Ga0163163_1000011017 744
165 3300014968 Ga0157379_10000227 Ga0157379_1000022719 744
166 3300014969 Ga0157376_10000161 Ga0157376_1000016115 744
167 3300025903 Ga0207680_10000852 Ga0207680_100008525 744
168 3300025907 Ga0207645_10000625 Ga0207645_1000062515 744
169 3300025909 Ga0207705_10002217 Ga0207705_100022178 744
170 3300025933 Ga0207706_10027491 Ga0207706_100274913 744
171 3300025940 Ga0207691_10000013 Ga0207691_10000013125 744
172 3300025942 Ga0207689_10038075 Ga0207689_100380752 744
173 3300025949 Ga0207667_10034565 Ga0207667_100345653 744
174 3300025960 Ga0207651_10000152 Ga0207651_1000015210 744
175 3300025972 Ga0207668_10000317 Ga0207668_1000031713 744
176 3300025986 Ga0207658_10000707 Ga0207658_1000070718 744
177 3300026023 Ga0207677_10000441 Ga0207677_1000044116 744
178 3300026035 Ga0207703_10001988 Ga0207703_100019882 744
179 3300026088 Ga0207641_10002996 Ga0207641_100029968 744
180 3300026089 Ga0207648_10013308 Ga0207648_100133085 744
181 3300026095 Ga0207676_10001843 Ga0207676_100018438 744
182 3300028379 Ga0268266_10001314 Ga0268266_1000131416 744
183 3300044656 Ga0466969_0001691 Ga0466969_0001691_5649_7991 744
184 3300044684 Ga0466966_0000389 Ga0466966_0000389_8527_10869 744
185 3300045049 Ga0466959_0000025 Ga0466959_0000025_39981_42323 744
186 3300053092 Ga0500583_0000622 Ga0500583_0000622_7597_9924 744
187 3300005335 Ga0070666_10000024 Ga0070666_100000249 746
188 3300005355 Ga0070671_100048687 Ga0070671_1000486873 746
189 3300005367 Ga0070667_100003545 Ga0070667_1000035459 746
190 3300005616 Ga0068852_100042651 Ga0068852_1000426512 746
191 3300005617 Ga0068859_100000041 Ga0068859_10000004110 746
192 3300005618 Ga0068864_100000924 Ga0068864_1000009249 746
193 3300005841 Ga0068863_100008107 Ga0068863_1000081074 746
194 3300005843 Ga0068860_100009100 Ga0068860_1000091009 746
195 3300006931 Ga0097620_100000041 Ga0097620_100000041155 746
196 3300009101 Ga0105247_10024536 Ga0105247_100245364 746
197 3300009174 Ga0105241_10001094 Ga0105241_100010944 746
198 3300009176 Ga0105242_10016253 Ga0105242_100162534 746
199 3300009545 Ga0105237_10005347 Ga0105237_100053476 746
200 3300013306 Ga0163162_10002847 Ga0163162_1000284710 746
201 3300014968 Ga0157379_10027504 Ga0157379_100275042 746
202 3300025900 Ga0207710_10012047 Ga0207710_100120474 746
203 3300025903 Ga0207680_10000151 Ga0207680_1000015116 746
204 3300025911 Ga0207654_10002698 Ga0207654_100026985 746
205 3300025914 Ga0207671_10008917 Ga0207671_100089173 746
206 3300025942 Ga0207689_10011051 Ga0207689_100110515 746
207 3300025986 Ga0207658_10021657 Ga0207658_100216572 746
208 3300026088 Ga0207641_10000369 Ga0207641_100003699 746
209 3300009093 Ga0105240_10033623 Ga0105240_100336232 748
210 3300049569 Ga0501032_0009991 Ga0501032_0009991_3840_6251 748
211 3300049652 Ga0501202_000620 Ga0501202_000620_33_2384 749
212 3300049653 Ga0501206_001620 Ga0501206_001620_333_2684 749
213 3300049675 Ga0501243_000673 Ga0501243_000673_260_2611 749
214 3300049705 Ga0501225_0002527 Ga0501225_0002527_2949_5300 749
215 iso_pu_bacteria 2738541278 2738730323 750
216 3300005366 Ga0070659_100018184 Ga0070659_1000181842 752
217 3300025904 Ga0207647_10000689 Ga0207647_1000068910 752
218 3300025932 Ga0207690_10022695 Ga0207690_100226952 752
219 iso_pu_bacteria 2881955468 2881958212 752
220 3300006880 Ga0075429_100031175 Ga0075429_1000311752 753
221 3300014326 Ga0157380_10000038 Ga0157380_1000003854 753
222 3300025937 Ga0207669_10003571 Ga0207669_100035714 753
223 3300047318 Ga0495636_0000047 Ga0495636_0000047_16731_19079 753
224 3300049571 Ga0501034_0000017 Ga0501034_0000017_156517_158871 753
225 3300049571 Ga0501034_0098970 Ga0501034_0098970_13_2361 753
226 3300003322 rootL2_10058344 rootL2_100583443 754
227 3300009093 Ga0105240_10000037 Ga0105240_1000003794 754
228 3300009147 Ga0114129_10061700 Ga0114129_100617002 754
229 3300010375 Ga0105239_10000606 Ga0105239_1000060632 754
230 3300013307 Ga0157372_10019681 Ga0157372_100196817 754
231 3300014326 Ga0157380_10001140 Ga0157380_1000114010 754
232 3300025913 Ga0207695_10000092 Ga0207695_10000092152 754
233 3300025937 Ga0207669_10029470 Ga0207669_100294701 754
234 3300026095 Ga0207676_10035212 Ga0207676_100352121 754
235 3300031251 Ga0265327_10000054 Ga0265327_10000054110 754
236 3300042876 Ga0451577_0025385 Ga0451577_0025385_1225_3666 754
237 3300044658 Ga0466972_0000108 Ga0466972_0000108_65710_68061 754
238 3300046616 Ga0495668_0003904 Ga0495668_0003904_8306_10657 754
239 3300049569 Ga0501032_0005186 Ga0501032_0005186_2157_4526 754
240 3300049572 Ga0501036_0026287 Ga0501036_0026287_2249_4618 754
241 3300049573 Ga0501037_0013837 Ga0501037_0013837_272_2641 754
242 3300049574 Ga0501038_0039951 Ga0501038_0039951_891_3260 754
243 3300049579 Ga0501043_0010400 Ga0501043_0010400_3416_5785 754
244 3300049580 Ga0501046_0007864 Ga0501046_0007864_4543_6912 754
245 3300049581 Ga0501047_0037783 Ga0501047_0037783_1355_3724 754
246 3300049589 Ga0501073_0019970 Ga0501073_0019970_743_3112 754
247 3300049744 Ga0501083_0010194 Ga0501083_0010194_2800_5169 754
248 3300049822 Ga0501035_0070854 Ga0501035_0070854_428_2797 754
249 3300049823 Ga0501044_0036349 Ga0501044_0036349_1198_3567 754
250 3300050493 nmdc:mga0k408_39178_c1 nmdc:mga0k408_39178_c1_194_2545 754
251 3300053086 Ga0500578_0000315 Ga0500578_0000315_51544_53895 754
252 3300053092 Ga0500583_0000017 Ga0500583_0000017_128911_131268 754
253 3300003203 JGI25406J46586_10001952 JGI25406J46586_100019526 755
254 3300003354 JGI25160J50197_1001246 JGI25160J50197_100124613 755
255 3300005336 Ga0070680_100000723 Ga0070680_1000007234 755
256 3300005337 Ga0070682_100002283 Ga0070682_1000022838 755
257 3300005338 Ga0068868_100008289 Ga0068868_1000082892 755
258 3300005341 Ga0070691_10000288 Ga0070691_100002883 755
259 3300005355 Ga0070671_100007461 Ga0070671_1000074617 755
260 3300005364 Ga0070673_100014578 Ga0070673_1000145783 755
261 3300005364 Ga0070673_100030621 Ga0070673_1000306212 755
262 3300005458 Ga0070681_10004084 Ga0070681_100040847 755
263 3300005530 Ga0070679_100001137 Ga0070679_1000011379 755
264 3300005539 Ga0068853_100010317 Ga0068853_1000103174 755
265 3300005539 Ga0068853_100019687 Ga0068853_1000196873 755
266 3300005841 Ga0068863_100058192 Ga0068863_1000581923 755
267 3300005843 Ga0068860_100001158 Ga0068860_10000115820 755
268 3300005985 Ga0081539_10001653 Ga0081539_1000165314 755
269 3300006358 Ga0068871_100003708 Ga0068871_1000037086 755
270 3300006358 Ga0068871_100015151 Ga0068871_1000151517 755
271 3300009093 Ga0105240_10016317 Ga0105240_100163177 755
272 3300009174 Ga0105241_10000113 Ga0105241_1000011352 755
273 3300009553 Ga0105249_10002286 Ga0105249_1000228613 755
274 3300010375 Ga0105239_10141082 Ga0105239_101410822 755
275 3300013104 Ga0157370_10001108 Ga0157370_1000110826 755
276 3300013297 Ga0157378_10000599 Ga0157378_100005999 755
277 3300013306 Ga0163162_10006530 Ga0163162_100065305 755
278 3300013306 Ga0163162_10061822 Ga0163162_100618222 755
279 3300014325 Ga0163163_10002402 Ga0163163_100024028 755
280 3300014969 Ga0157376_10003186 Ga0157376_100031863 755
281 3300021384 Ga0213876_10008270 Ga0213876_100082703 755
282 3300025302 Ga0207426_1000009 Ga0207426_1000009186 755
283 3300025901 Ga0207688_10005369 Ga0207688_100053694 755
284 3300025911 Ga0207654_10005925 Ga0207654_100059252 755
285 3300025912 Ga0207707_10000189 Ga0207707_1000018915 755
286 3300025913 Ga0207695_10005298 Ga0207695_1000529816 755
287 3300025917 Ga0207660_10000643 Ga0207660_1000064314 755
288 3300025921 Ga0207652_10000755 Ga0207652_1000075520 755
289 3300025931 Ga0207644_10029880 Ga0207644_100298802 755
290 3300025934 Ga0207686_10000403 Ga0207686_100004033 755
291 3300025940 Ga0207691_10032448 Ga0207691_100324483 755
292 3300025949 Ga0207667_10067550 Ga0207667_100675502 755
293 3300026088 Ga0207641_10000331 Ga0207641_1000033117 755
294 3300026121 Ga0207683_10006678 Ga0207683_100066784 755
295 3300026121 Ga0207683_10035608 Ga0207683_100356081 755
296 3300028794 Ga0307515_10000001 Ga0307515_10000001258 755
297 3300031251 Ga0265327_10000476 Ga0265327_1000047651 755
298 3300039437 Ga0436365_0467612 Ga0436365_0467612_3918_6272 755
299 3300044658 Ga0466972_0000006 Ga0466972_0000006_184232_186613 755
300 3300044765 Ga0466970_0003247 Ga0466970_0003247_3320_5701 755
301 3300049823 Ga0501044_0012087 Ga0501044_0012087_421_2802 755
302 3300005329 Ga0070683_100095902 Ga0070683_1000959021 756
303 3300005330 Ga0070690_100039012 Ga0070690_1000390121 756
304 3300005339 Ga0070660_100008301 Ga0070660_1000083012 756
305 3300006237 Ga0097621_100008626 Ga0097621_1000086262 756
306 3300006358 Ga0068871_100014836 Ga0068871_1000148365 756
307 3300013100 Ga0157373_10006134 Ga0157373_100061347 756
308 3300013104 Ga0157370_10017671 Ga0157370_100176715 756
309 3300025919 Ga0207657_10004521 Ga0207657_1000452110 756
310 3300025933 Ga0207706_10014122 Ga0207706_100141221 756
311 3300025942 Ga0207689_10019768 Ga0207689_100197681 756
312 3300025942 Ga0207689_10020176 Ga0207689_100201763 756
313 3300025949 Ga0207667_10068400 Ga0207667_100684001 756
314 3300037471 Ga0395905_0000003 Ga0395905_0000003_1306684_1309185 756
315 3300049571 Ga0501034_0108993 Ga0501034_0108993_143_2551 756
316 3300013307 Ga0157372_10003238 Ga0157372_1000323811 757
317 2162886007 SwRhRL2b_contig_1663050 SwRhRL2b_0644.00007110 758
318 3300005289 Ga0065704_10070140 Ga0065704_10070140228 758

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07715

Plug

TonB-dependent Receptor Plug Domain

203

306

0.91

PF13715

CarbopepD_reg_2

CarboxypepD_reg-like domain

109

192

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
2nsm-assembly1.cif.gz_A crystal structure of the human carboxypeptidase n (kininase i) catalytic domain 0.8986 26 100
1qmu-assembly1.cif.gz_A duck carboxypeptidase d domain ii 0.8928 26 100
5aq0-assembly1.cif.gz_A the structure of the transthyretin-like domain of the first catalytic domain of the human carboxypeptidase d 0.8912 26 100
3mn8-assembly2.cif.gz_B structure of drosophila melanogaster carboxypeptidase d isoform 1b short 0.8458 23 101
3mn8-assembly4.cif.gz_D structure of drosophila melanogaster carboxypeptidase d isoform 1b short 0.8454 23 100
ID Description Score Start End Superfamily
af_Q22825_357_435_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.9311 27 100 2.60.40.1120
af_P42787_763_851_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.9264 26 101 2.60.40.1120
af_E7FFQ7_717_794_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.9084 27 100 2.60.40.1120
af_P15087_375_469_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.9078 26 103 2.60.40.1120
af_F1RAC0_1040_1118_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.9048 26 100 2.60.40.1120
ID Description Score Start End GO Terms
AF-A0A8A7WPF3-F1-model_v4 deleted 0.9497 4 758
AF-A0A8A7WPF3-F1-model_v4 deleted 0.9449 4 758
AF-A0A3D0HZA9-F1-model_v4 TonB-dependent receptor plug domain-containing protein 0.9413 19 758 GO:0009279
GO:0015344
AF-A0A3E0MMQ5-F1-model_v4 TonB-dependent receptor-like beta-barrel domain-containing protein 0.9373 152 758 GO:0009279
GO:0015344
AF-A0A3D5Z2V2-F1-model_v4 TonB-dependent receptor-like beta-barrel domain-containing protein 0.9366 369 758 GO:0009279
GO:0015344

Feature Viewer

pLDDT pTM Quality
81.35 0.82 High
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Predicted Structure (AlphaFold2)

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