F402589

General Info

Members Datasets Scaffolds Average Seq Length
314 178 628 394

Family's Representative Sequence

Representative Sequence 3300005548|Ga0070665_100000633|Ga0070665_10000063335
Length 450
Sequence MLESHAKFRRVIWIVLDSVGIGALPDAGDYGDVGRTTLGHIAESRPLKIPTLVELGLANIAPLAHLVPAAQPLGAYGKGATHSPGKDTTTGHWEMAGIWLDQAFPVYKHGFPPEIISAFESRIGRKTIGNKPASGTEIIKELGEEHVRTGKPIVYTSGDSVFQIATHEGVIPIADLFKMCEIAREILQGPHKVGRVIARPFTGAPGHFTRTPRRHDYAVEPPKPMLLDVLAEKNVSVFGVGKIHDIYNGRGVEQYVTTTSNSDGMEKITAALRDRPTGLIFCNLVDFDMLYGHRKDVEGFAKSLEEFDAQLAQFLPLLTRDDLLMITADHGCDPDPRWETTDHSREYVPILAFSPSFSVAQAIAPALRVADFSAGTPGTPPLSIEADPHSQSAAGSVLNASGPGSLSDHGYSVLIDRNLGTRSTLADMGQTIAQNFGGTIPHGSSFLNHL

Samples

Sample ID Description Type Environment
1 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
2 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
21 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
22 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
23 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
24 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
33 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
34 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
35 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
36 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
41 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
44 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
47 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
50 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
51 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
52 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
53 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
59 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
60 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
61 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
62 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
63 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
64 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
91 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
94 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
95 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
96 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
97 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
98 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
99 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
100 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
101 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
102 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
103 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
104 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
105 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
106 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
107 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
108 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
109 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
110 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
111 3300033547 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 Metagenome Unclassified
112 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
113 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
114 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
115 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
116 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
117 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
118 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
119 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
120 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
121 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
122 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
123 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
124 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
125 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
126 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
127 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
128 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
129 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
130 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
131 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
132 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
133 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
134 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
135 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
136 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
137 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
138 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
139 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
140 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
141 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
142 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
143 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
144 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
145 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
146 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
147 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
148 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
149 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
150 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
151 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
152 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
153 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
154 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
155 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
156 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
157 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
158 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
159 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
160 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
161 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
162 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
163 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
164 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
165 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
166 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
167 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
168 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
169 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
170 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
171 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
172 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
173 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
174 3300059503 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 21R_SD_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
175 3300059644 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 38R_AD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
176 3300059647 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 43R_SW_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
177 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
178 8054795415 Paenibacillus periandrae PM10 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 96.18
Metatranscriptomes 3.18
Isolates 0.64

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.32
Nodule 0.32
Rhizoplane 2.55
Rhizosphere 94.27
Stem 0
Stem Tuber 0
Unclassified 7.64

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070665_100000633 3300005548 Bacteria 47882
2 Ga0058863_10095008 3300004799 Bacteria 2921
3 Ga0070658_10209270 3300005327 Bacteria 1647
4 Ga0070683_100021222 3300005329 Bacteria 5793
5 Ga0070690_100185839 3300005330 Bacteria 1438
6 Ga0068869_100000854 3300005334 Bacteria 17492
7 Ga0068868_100026941 3300005338 Bacteria 4382
8 Ga0068868_100068132 3300005338 Bacteria 2833
9 Ga0070703_10008376 3300005406 Unclassified 2906
10 Ga0070709_10001728 3300005434 Bacteria 11874
11 Ga0070709_10086729 3300005434 Unclassified 2055
12 Ga0070713_100010678 3300005436 Bacteria 6648
13 Ga0070713_100042413 3300005436 Bacteria 3713
14 Ga0070705_100000521 3300005440 Bacteria 22269
15 Ga0070708_100001558 3300005445 Bacteria 17566
16 Ga0070708_100047762 3300005445 Bacteria 3782
17 Ga0070708_100076001 3300005445 Bacteria 3032
18 Ga0070708_100116002 3300005445 Bacteria 2466
19 Ga0070708_100190372 3300005445 Unclassified 1919
20 Ga0070681_10066178 3300005458 Bacteria 3582
21 Ga0070681_10110146 3300005458 Bacteria 2693
22 Ga0070685_10083108 3300005466 Bacteria 1923
23 Ga0070706_100010051 3300005467 Bacteria 8788
24 Ga0070706_100023758 3300005467 Bacteria 5643
25 Ga0070707_100011757 3300005468 Bacteria 8170
26 Ga0070707_100054013 3300005468 Bacteria 3851
27 Ga0070698_100001147 3300005471 Bacteria 29334
28 Ga0070698_100013112 3300005471 Bacteria 8772
29 Ga0070679_100415616 3300005530 Bacteria 1291
30 Ga0070697_100001906 3300005536 Bacteria 15957
31 Ga0070697_100004543 3300005536 Bacteria 10674
32 Ga0070697_100077662 3300005536 Bacteria 2732
33 Ga0070697_100094562 3300005536 Bacteria 2477
34 Ga0070697_100142289 3300005536 Unclassified 2018
35 Ga0070686_100104076 3300005544 Bacteria 1922
36 Ga0070695_100010422 3300005545 Bacteria 5550
37 Ga0070696_100007824 3300005546 Bacteria 7136
38 Ga0070693_100000294 3300005547 Bacteria 23303
39 Ga0070665_100030926 3300005548 Bacteria 5388
40 Ga0070704_100017644 3300005549 Bacteria 4544
41 Ga0070704_100053223 3300005549 Bacteria 2860
42 Ga0068855_100097394 3300005563 Unclassified 3388
43 Ga0068855_100281365 3300005563 Bacteria 1847
44 Ga0068857_100039983 3300005577 Bacteria 4158
45 Ga0068856_100037777 3300005614 Bacteria 4739
46 Ga0068856_100093653 3300005614 Bacteria 2990
47 Ga0068856_100171475 3300005614 Bacteria 2182
48 Ga0068859_100048408 3300005617 Bacteria 4271
49 Ga0068859_100174851 3300005617 Bacteria 2229
50 Ga0068863_100008327 3300005841 Bacteria 10131
51 Ga0068858_100000474 3300005842 Bacteria 41776
52 Ga0068858_100043171 3300005842 Bacteria 4180
53 Ga0068860_100013503 3300005843 Bacteria 8008
54 Ga0068860_100017253 3300005843 Bacteria 7036
55 Ga0070717_10128851 3300006028 Bacteria 2174
56 Ga0070717_10273595 3300006028 Bacteria 1496
57 Ga0070715_10019161 3300006163 Bacteria 2619
58 Ga0070716_100009667 3300006173 Bacteria 4812
59 Ga0070716_100012431 3300006173 Bacteria 4316
60 Ga0070716_100050486 3300006173 Bacteria 2361
61 Ga0070716_100198775 3300006173 Bacteria 1331
62 Ga0070712_100008547 3300006175 Bacteria 6440
63 Ga0070712_100037393 3300006175 Bacteria 3309
64 Ga0070712_100057040 3300006175 Bacteria 2742
65 Ga0070712_100107526 3300006175 Bacteria 2075
66 Ga0097621_100010622 3300006237 Bacteria 6746
67 Ga0068871_100004133 3300006358 Bacteria 10041
68 Ga0068871_100034107 3300006358 Bacteria 4036
69 Ga0075433_10115548 3300006852 Bacteria 2381
70 Ga0075434_100002159 3300006871 Bacteria 17133
71 Ga0068865_100116387 3300006881 Bacteria 1980
72 Ga0075436_100003690 3300006914 Bacteria 10495
73 Ga0075436_100011954 3300006914 Bacteria 5953
74 Ga0097620_100048406 3300006931 Bacteria 4271
75 Ga0097620_100174865 3300006931 Bacteria 2229
76 Ga0075435_100013455 3300007076 Bacteria 6088
77 Ga0099794_10000962 3300007265 Bacteria 9709
78 Ga0099794_10003119 3300007265 Bacteria 6275
79 Ga0099794_10009306 3300007265 Bacteria 4124
80 Ga0099794_10084295 3300007265 Bacteria 1571
81 Ga0099794_10104796 3300007265 Unclassified 1414
82 Ga0105240_10059358 3300009093 Bacteria 4774
83 Ga0105245_10044797 3300009098 Bacteria 3949
84 Ga0105242_10025414 3300009176 Bacteria 4687
85 Ga0105242_10050591 3300009176 Bacteria 3383
86 Ga0105242_10175308 3300009176 Bacteria 1887
87 Ga0105248_10008283 3300009177 Bacteria 11420
88 Ga0105248_10025996 3300009177 Bacteria 6512
89 Ga0105248_10032812 3300009177 Bacteria 5801
90 Ga0105238_10027956 3300009551 Bacteria 5747
91 Ga0105238_10132081 3300009551 Bacteria 2475
92 Ga0105238_10161024 3300009551 Bacteria 2220
93 Ga0105239_10008673 3300010375 Bacteria 11517
94 Ga0105239_10018288 3300010375 Bacteria 7748
95 Ga0105239_10098811 3300010375 Bacteria 3227
96 Ga0157370_10119444 3300013104 Bacteria 2461
97 Ga0157369_10011597 3300013105 Bacteria 10007
98 Ga0157369_10206196 3300013105 Bacteria 2062
99 Ga0157369_10228106 3300013105 Bacteria 1948
100 Ga0157374_10035779 3300013296 Unclassified 4544
101 Ga0157374_10074260 3300013296 Unclassified 3211
102 Ga0157378_10000922 3300013297 Bacteria 27059
103 Ga0157378_10004747 3300013297 Bacteria 11911
104 Ga0157378_10022456 3300013297 Bacteria 5554
105 Ga0157378_10055171 3300013297 Bacteria 3539
106 Ga0157378_10113206 3300013297 Bacteria 2490
107 Ga0163162_10007922 3300013306 Bacteria 10356
108 Ga0163162_10063503 3300013306 Bacteria 3736
109 Ga0157372_10132255 3300013307 Bacteria 2871
110 Ga0157375_10000276 3300013308 Bacteria 46617
111 Ga0157376_10000066 3300014969 Bacteria 85506
112 Ga0157376_10006175 3300014969 Bacteria 8440
113 Ga0157376_10036137 3300014969 Bacteria 4000
114 Ga0206350_10742559 3300020080 Bacteria 3545
115 Ga0213876_10005947 3300021384 Bacteria 6667
116 Ga0213875_10037244 3300021388 Bacteria 2292
117 Ga0213875_10045162 3300021388 Bacteria 2068
118 Ga0224712_10004307 3300022467 Bacteria 3824
119 Ga0224712_10007619 3300022467 Bacteria 3161
120 Ga0228598_1004544 3300024227 Bacteria 2937
121 Ga0209566_100090 3300025225 Bacteria 141829
122 Ga0207653_10010162 3300025885 Unclassified 2935
123 Ga0207647_10004876 3300025904 Bacteria 9910
124 Ga0207699_10000983 3300025906 Bacteria 13546
125 Ga0207684_10004991 3300025910 Bacteria 12362
126 Ga0207684_10036930 3300025910 Bacteria 4146
127 Ga0207707_10010042 3300025912 Bacteria 8211
128 Ga0207707_10070904 3300025912 Bacteria 3036
129 Ga0207695_10024456 3300025913 Bacteria 6796
130 Ga0207695_10168856 3300025913 Bacteria 2114
131 Ga0207695_10258948 3300025913 Bacteria 1638
132 Ga0207693_10044611 3300025915 Bacteria 3485
133 Ga0207693_10075300 3300025915 Bacteria 2643
134 Ga0207663_10003960 3300025916 Bacteria 7328
135 Ga0207663_10104031 3300025916 Bacteria 1913
136 Ga0207657_10015485 3300025919 Bacteria 7387
137 Ga0207646_10000016 3300025922 Bacteria 337048
138 Ga0207646_10000030 3300025922 Bacteria 219473
139 Ga0207646_10000313 3300025922 Bacteria 65784
140 Ga0207646_10023774 3300025922 Bacteria 5624
141 Ga0207646_10211675 3300025922 Bacteria 1751
142 Ga0207694_10071357 3300025924 Bacteria 2714
143 Ga0207687_10096717 3300025927 Bacteria 2165
144 Ga0207664_10237029 3300025929 Bacteria 1588
145 Ga0207704_10065380 3300025938 Bacteria 2277
146 Ga0207665_10000179 3300025939 Bacteria 42666
147 Ga0207665_10006513 3300025939 Bacteria 7743
148 Ga0207665_10163015 3300025939 Bacteria 1605
149 Ga0207689_10001226 3300025942 Bacteria 24657
150 Ga0207677_10003509 3300026023 Bacteria 8309
151 Ga0207703_10003401 3300026035 Bacteria 13359
152 Ga0207703_10008898 3300026035 Bacteria 7910
153 Ga0207703_10008950 3300026035 Bacteria 7886
154 Ga0207639_10173699 3300026041 Bacteria 1827
155 Ga0207702_10143734 3300026078 Bacteria 2162
156 Ga0207641_10008911 3300026088 Bacteria 8288
157 Ga0207641_10050959 3300026088 Bacteria 3505
158 Ga0207648_10030664 3300026089 Unclassified 4759
159 Ga0207674_10041781 3300026116 Bacteria 4740
160 Ga0207675_100107249 3300026118 Bacteria 2634
161 Ga0209588_1017513 3300027671 Bacteria 2222
162 Ga0265354_1000576 3300028016 Bacteria 6255
163 Ga0268266_10000208 3300028379 Bacteria 102593
164 Ga0268266_10013356 3300028379 Bacteria 7075
165 Ga0268264_10004293 3300028381 Bacteria 12162
166 Ga0265319_1001419 3300028563 Bacteria 14355
167 Ga0265318_10000339 3300028577 Bacteria 37188
168 Ga0265322_10002876 3300028654 Bacteria 5253
169 Ga0265338_10019423 3300028800 Bacteria 7212
170 Ga0265338_10108726 3300028800 Bacteria 2239
171 Ga0265762_1004625 3300030760 Unclassified 2460
172 Ga0265770_1005824 3300030878 Bacteria 1704
173 Ga0265760_10012005 3300031090 Unclassified 2476
174 Ga0265332_10003037 3300031238 Bacteria 8222
175 Ga0265320_10000128 3300031240 Bacteria 66582
176 Ga0265320_10056872 3300031240 Bacteria 1878
177 Ga0265325_10001387 3300031241 Bacteria 17099
178 Ga0265325_10019646 3300031241 Bacteria 3731
179 Ga0265329_10000607 3300031242 Bacteria 18458
180 Ga0265340_10003023 3300031247 Bacteria 9573
181 Ga0265339_10001250 3300031249 Bacteria 19125
182 Ga0265339_10011997 3300031249 Bacteria 5310
183 Ga0265331_10000094 3300031250 Bacteria 122448
184 Ga0265331_10007499 3300031250 Bacteria 6307
185 Ga0265316_10001510 3300031344 Bacteria 24953
186 Ga0265316_10003080 3300031344 Bacteria 17006
187 Ga0265316_10088596 3300031344 Bacteria 2363
188 Ga0265313_10010303 3300031595 Bacteria 5937
189 Ga0265313_10015400 3300031595 Bacteria 4454
190 Ga0265314_10002144 3300031711 Bacteria 20676
191 Ga0265314_10003879 3300031711 Bacteria 14235
192 Ga0265342_10000013 3300031712 Bacteria 202181
193 Ga0265342_10000483 3300031712 Bacteria 43126
194 Ga0316212_1002782 3300033547 Bacteria 2503
195 Ga0373934_0019015 3300035086 Bacteria 2633
196 Ga0373956_0024786 3300035119 Bacteria 2588
197 Ga0373927_0000166 3300035695 Bacteria 51784
198 Ga0373927_0152072 3300035695 Bacteria 1515
199 Ga0373933_0000292 3300035724 Bacteria 32432
200 Ga0373933_0005634 3300035724 Bacteria 6824
201 Ga0373933_0123181 3300035724 Bacteria 1625
202 Ga0373947_0009129 3300035725 Bacteria 5699
203 Ga0373947_0012773 3300035725 Unclassified 4813
204 Ga0373937_0000500 3300036401 Bacteria 35862
205 Ga0373937_0001335 3300036401 Bacteria 20638
206 Ga0373937_0021589 3300036401 Bacteria 5777
207 Ga0373937_0028485 3300036401 Bacteria 5055
208 Ga0373937_0375088 3300036401 Bacteria 1349
209 Ga0373925_0000899 3300037068 Bacteria 27172
210 Ga0373925_0126887 3300037068 Bacteria 1986
211 Ga0373925_0227495 3300037068 Bacteria 1490
212 Ga0395900_0253314 3300037418 Unclassified 1761
213 Ga0436364_0755271 3300037853 Bacteria 2069
214 Ga0436364_0925539 3300037853 Bacteria 2859
215 Ga0436365_1375925 3300039437 Bacteria 1887
216 Ga0453683_0002179 3300044673 Bacteria 15576
217 Ga0453683_0013548 3300044673 Bacteria 5318
218 Ga0453684_0005601 3300044712 Bacteria 24726
219 Ga0453684_0097345 3300044712 Bacteria 3611
220 Ga0466959_0048944 3300045049 Bacteria 3105
221 Ga0466967_0289628 3300045976 Bacteria 1573
222 Ga0495592_0088075 3300046454 Bacteria 2232
223 Ga0495603_0033028 3300046455 Bacteria 3114
224 Ga0495603_0069452 3300046455 Bacteria 2072
225 Ga0495629_0024789 3300046459 Bacteria 4270
226 Ga0495641_0073795 3300046461 Bacteria 1530
227 Ga0495651_0000225 3300046462 Bacteria 42984
228 Ga0495651_0000369 3300046462 Bacteria 34680
229 Ga0495651_0015273 3300046462 Bacteria 5936
230 Ga0495651_0085806 3300046462 Bacteria 2370
231 Ga0495653_0015860 3300046463 Bacteria 6141
232 Ga0495580_0001196 3300046472 Bacteria 22834
233 Ga0495580_0085097 3300046472 Bacteria 2203
234 Ga0495582_0004755 3300046473 Bacteria 7634
235 Ga0495582_0026319 3300046473 Bacteria 3188
236 Ga0495582_0095924 3300046473 Unclassified 1657
237 Ga0495662_0022794 3300046476 Bacteria 3023
238 Ga0495664_0073824 3300046477 Bacteria 2040
239 Ga0495594_0032926 3300046499 Bacteria 2815
240 Ga0495608_0018009 3300046511 Unclassified 4880
241 Ga0495618_0101854 3300046514 Bacteria 1838
242 Ga0495628_0000081 3300046516 Bacteria 74176
243 Ga0495628_0007120 3300046516 Bacteria 9690
244 Ga0495630_0017069 3300046517 Bacteria 5314
245 Ga0495652_0003757 3300046529 Bacteria 14858
246 Ga0495652_0011752 3300046529 Bacteria 7910
247 Ga0495665_0001663 3300046531 Bacteria 11930
248 Ga0495586_0027980 3300046535 Unclassified 3016
249 Ga0495587_0000407 3300046536 Bacteria 30515
250 Ga0495587_0081478 3300046536 Bacteria 1875
251 Ga0495667_0005324 3300046559 Bacteria 8697
252 Ga0495667_0006672 3300046559 Bacteria 7834
253 Ga0495667_0181565 3300046559 Bacteria 1350
254 Ga0495635_0016217 3300046663 Bacteria 5200
255 Ga0495657_0008812 3300046675 Bacteria 7685
256 Ga0495657_0071837 3300046675 Bacteria 2258
257 Ga0495623_0061368 3300046679 Bacteria 2358
258 Ga0495623_0115218 3300046679 Bacteria 1624
259 Ga0495646_0007099 3300046680 Bacteria 7116
260 Ga0495658_0004140 3300046683 Bacteria 7144
261 Ga0495613_0041150 3300046689 Bacteria 3422
262 Ga0495613_0088478 3300046689 Bacteria 2244
263 Ga0495624_0012978 3300046690 Bacteria 5682
264 Ga0495600_0075455 3300046809 Bacteria 2202
265 Ga0495581_0111938 3300047315 Bacteria 1587
266 Ga0495581_0139627 3300047315 Unclassified 1413
267 Ga0495604_0000645 3300047317 Bacteria 29850
268 Ga0495604_0013869 3300047317 Bacteria 6428
269 Ga0495604_0025035 3300047317 Bacteria 4757
270 Ga0495674_0016249 3300047319 Bacteria 6943
271 Ga0495674_0050254 3300047319 Unclassified 3680
272 Ga0495674_0050402 3300047319 Bacteria 3673
273 Ga0495674_0060904 3300047319 Bacteria 3292
274 Ga0495674_0113043 3300047319 Bacteria 2300
275 Ga0495676_0043664 3300047321 Bacteria 3665
276 Ga0495680_0000757 3300047322 Bacteria 36265
277 Ga0495680_0169147 3300047322 Bacteria 1583
278 Ga0495680_0195069 3300047322 Bacteria 1455
279 Ga0495675_0000038 3300047444 Bacteria 91107
280 Ga0495675_0004126 3300047444 Bacteria 8801
281 Ga0495675_0066283 3300047444 Unclassified 2282
282 Ga0495684_0000336 3300047471 Bacteria 37705
283 Ga0495684_0043923 3300047471 Bacteria 3421
284 Ga0495684_0058036 3300047471 Bacteria 2949
285 Ga0495684_0070403 3300047471 Bacteria 2659
286 Ga0495684_0107301 3300047471 Bacteria 2109
287 Ga0495593_0003171 3300047673 Bacteria 9871
288 Ga0495602_0002160 3300048088 Bacteria 19859
289 Ga0495602_0016531 3300048088 Bacteria 7418
290 Ga0495602_0051056 3300048088 Bacteria 3688
291 Ga0495602_0055488 3300048088 Unclassified 3489
292 Ga0495602_0121855 3300048088 Bacteria 2097
293 Ga0495614_0018529 3300048089 Unclassified 3015
294 Ga0496102_0057467 3300048905 Unclassified 3552
295 Ga0496106_0050035 3300048909 Bacteria 3149
296 Ga0496112_0028495 3300048915 Bacteria 5391
297 Ga0496112_0072434 3300048915 Bacteria 3406
298 Ga0496114_0014120 3300048917 Bacteria 6404
299 Ga0496115_0006639 3300048918 Bacteria 8489
300 Ga0496115_0039526 3300048918 Bacteria 3747
301 Ga0496115_0141370 3300048918 Bacteria 1986
302 nmdc:mga0n895_36350_c1 3300050512 Bacteria 4755
303 nmdc:mga0rr50_159217_c1 3300050513 Bacteria 1831
304 nmdc:mga0rr50_74949_c1 3300050513 Bacteria 2592
305 nmdc:mga08x19_162_c1 3300050514 Bacteria 55337
306 nmdc:mga08x19_9421_c1 3300050514 Bacteria 5849
307 Ga0495612_0002713 3300053078 Bacteria 7323
308 Ga0495619_0043308 3300053085 Unclassified 2950
309 Ga0495619_0064231 3300053085 Bacteria 2447
310 Ga0587080_000710 3300059503 Bacteria 3113
311 Ga0587075_000530 3300059644 Bacteria 3118
312 Ga0587079_001380 3300059647 Bacteria 2695
313 8002323692 8002317523 Bacteria 8051857
314 8054798525 8054795415 Bacteria 9785225
315 Ga0070665_100000633
316 Ga0058863_10095008
317 Ga0070658_10209270
318 Ga0070683_100021222
319 Ga0070690_100185839
320 Ga0068869_100000854
321 Ga0068868_100026941
322 Ga0068868_100068132
323 Ga0070703_10008376
324 Ga0070709_10001728
325 Ga0070709_10086729
326 Ga0070713_100010678
327 Ga0070713_100042413
328 Ga0070705_100000521
329 Ga0070708_100001558
330 Ga0070708_100047762
331 Ga0070708_100076001
332 Ga0070708_100116002
333 Ga0070708_100190372
334 Ga0070681_10066178
335 Ga0070681_10110146
336 Ga0070685_10083108
337 Ga0070706_100010051
338 Ga0070706_100023758
339 Ga0070707_100011757
340 Ga0070707_100054013
341 Ga0070698_100001147
342 Ga0070698_100013112
343 Ga0070679_100415616
344 Ga0070697_100001906
345 Ga0070697_100004543
346 Ga0070697_100077662
347 Ga0070697_100094562
348 Ga0070697_100142289
349 Ga0070686_100104076
350 Ga0070695_100010422
351 Ga0070696_100007824
352 Ga0070693_100000294
353 Ga0070665_100030926
354 Ga0070704_100017644
355 Ga0070704_100053223
356 Ga0068855_100097394
357 Ga0068855_100281365
358 Ga0068857_100039983
359 Ga0068856_100037777
360 Ga0068856_100093653
361 Ga0068856_100171475
362 Ga0068859_100048408
363 Ga0068859_100174851
364 Ga0068863_100008327
365 Ga0068858_100000474
366 Ga0068858_100043171
367 Ga0068860_100013503
368 Ga0068860_100017253
369 Ga0070717_10128851
370 Ga0070717_10273595
371 Ga0070715_10019161
372 Ga0070716_100009667
373 Ga0070716_100012431
374 Ga0070716_100050486
375 Ga0070716_100198775
376 Ga0070712_100008547
377 Ga0070712_100037393
378 Ga0070712_100057040
379 Ga0070712_100107526
380 Ga0097621_100010622
381 Ga0068871_100004133
382 Ga0068871_100034107
383 Ga0075433_10115548
384 Ga0075434_100002159
385 Ga0068865_100116387
386 Ga0075436_100003690
387 Ga0075436_100011954
388 Ga0097620_100048406
389 Ga0097620_100174865
390 Ga0075435_100013455
391 Ga0099794_10000962
392 Ga0099794_10003119
393 Ga0099794_10009306
394 Ga0099794_10084295
395 Ga0099794_10104796
396 Ga0105240_10059358
397 Ga0105245_10044797
398 Ga0105242_10025414
399 Ga0105242_10050591
400 Ga0105242_10175308
401 Ga0105248_10008283
402 Ga0105248_10025996
403 Ga0105248_10032812
404 Ga0105238_10027956
405 Ga0105238_10132081
406 Ga0105238_10161024
407 Ga0105239_10008673
408 Ga0105239_10018288
409 Ga0105239_10098811
410 Ga0157370_10119444
411 Ga0157369_10011597
412 Ga0157369_10206196
413 Ga0157369_10228106
414 Ga0157374_10035779
415 Ga0157374_10074260
416 Ga0157378_10000922
417 Ga0157378_10004747
418 Ga0157378_10022456
419 Ga0157378_10055171
420 Ga0157378_10113206
421 Ga0163162_10007922
422 Ga0163162_10063503
423 Ga0157372_10132255
424 Ga0157375_10000276
425 Ga0157376_10000066
426 Ga0157376_10006175
427 Ga0157376_10036137
428 Ga0206350_10742559
429 Ga0213876_10005947
430 Ga0213875_10037244
431 Ga0213875_10045162
432 Ga0224712_10004307
433 Ga0224712_10007619
434 Ga0228598_1004544
435 Ga0209566_100090
436 Ga0207653_10010162
437 Ga0207647_10004876
438 Ga0207699_10000983
439 Ga0207684_10004991
440 Ga0207684_10036930
441 Ga0207707_10010042
442 Ga0207707_10070904
443 Ga0207695_10024456
444 Ga0207695_10168856
445 Ga0207695_10258948
446 Ga0207693_10044611
447 Ga0207693_10075300
448 Ga0207663_10003960
449 Ga0207663_10104031
450 Ga0207657_10015485
451 Ga0207646_10000016
452 Ga0207646_10000030
453 Ga0207646_10000313
454 Ga0207646_10023774
455 Ga0207646_10211675
456 Ga0207694_10071357
457 Ga0207687_10096717
458 Ga0207664_10237029
459 Ga0207704_10065380
460 Ga0207665_10000179
461 Ga0207665_10006513
462 Ga0207665_10163015
463 Ga0207689_10001226
464 Ga0207677_10003509
465 Ga0207703_10003401
466 Ga0207703_10008898
467 Ga0207703_10008950
468 Ga0207639_10173699
469 Ga0207702_10143734
470 Ga0207641_10008911
471 Ga0207641_10050959
472 Ga0207648_10030664
473 Ga0207674_10041781
474 Ga0207675_100107249
475 Ga0209588_1017513
476 Ga0265354_1000576
477 Ga0268266_10000208
478 Ga0268266_10013356
479 Ga0268264_10004293
480 Ga0265319_1001419
481 Ga0265318_10000339
482 Ga0265322_10002876
483 Ga0265338_10019423
484 Ga0265338_10108726
485 Ga0265762_1004625
486 Ga0265770_1005824
487 Ga0265760_10012005
488 Ga0265332_10003037
489 Ga0265320_10000128
490 Ga0265320_10056872
491 Ga0265325_10001387
492 Ga0265325_10019646
493 Ga0265329_10000607
494 Ga0265340_10003023
495 Ga0265339_10001250
496 Ga0265339_10011997
497 Ga0265331_10000094
498 Ga0265331_10007499
499 Ga0265316_10001510
500 Ga0265316_10003080
501 Ga0265316_10088596
502 Ga0265313_10010303
503 Ga0265313_10015400
504 Ga0265314_10002144
505 Ga0265314_10003879
506 Ga0265342_10000013
507 Ga0265342_10000483
508 Ga0316212_1002782
509 Ga0373934_0019015
510 Ga0373956_0024786
511 Ga0373927_0000166
512 Ga0373927_0152072
513 Ga0373933_0000292
514 Ga0373933_0005634
515 Ga0373933_0123181
516 Ga0373947_0009129
517 Ga0373947_0012773
518 Ga0373937_0000500
519 Ga0373937_0001335
520 Ga0373937_0021589
521 Ga0373937_0028485
522 Ga0373937_0375088
523 Ga0373925_0000899
524 Ga0373925_0126887
525 Ga0373925_0227495
526 Ga0395900_0253314
527 Ga0436364_0755271
528 Ga0436364_0925539
529 Ga0436365_1375925
530 Ga0453683_0002179
531 Ga0453683_0013548
532 Ga0453684_0005601
533 Ga0453684_0097345
534 Ga0466959_0048944
535 Ga0466967_0289628
536 Ga0495592_0088075
537 Ga0495603_0033028
538 Ga0495603_0069452
539 Ga0495629_0024789
540 Ga0495641_0073795
541 Ga0495651_0000225
542 Ga0495651_0000369
543 Ga0495651_0015273
544 Ga0495651_0085806
545 Ga0495653_0015860
546 Ga0495580_0001196
547 Ga0495580_0085097
548 Ga0495582_0004755
549 Ga0495582_0026319
550 Ga0495582_0095924
551 Ga0495662_0022794
552 Ga0495664_0073824
553 Ga0495594_0032926
554 Ga0495608_0018009
555 Ga0495618_0101854
556 Ga0495628_0000081
557 Ga0495628_0007120
558 Ga0495630_0017069
559 Ga0495652_0003757
560 Ga0495652_0011752
561 Ga0495665_0001663
562 Ga0495586_0027980
563 Ga0495587_0000407
564 Ga0495587_0081478
565 Ga0495667_0005324
566 Ga0495667_0006672
567 Ga0495667_0181565
568 Ga0495635_0016217
569 Ga0495657_0008812
570 Ga0495657_0071837
571 Ga0495623_0061368
572 Ga0495623_0115218
573 Ga0495646_0007099
574 Ga0495658_0004140
575 Ga0495613_0041150
576 Ga0495613_0088478
577 Ga0495624_0012978
578 Ga0495600_0075455
579 Ga0495581_0111938
580 Ga0495581_0139627
581 Ga0495604_0000645
582 Ga0495604_0013869
583 Ga0495604_0025035
584 Ga0495674_0016249
585 Ga0495674_0050254
586 Ga0495674_0050402
587 Ga0495674_0060904
588 Ga0495674_0113043
589 Ga0495676_0043664
590 Ga0495680_0000757
591 Ga0495680_0169147
592 Ga0495680_0195069
593 Ga0495675_0000038
594 Ga0495675_0004126
595 Ga0495675_0066283
596 Ga0495684_0000336
597 Ga0495684_0043923
598 Ga0495684_0058036
599 Ga0495684_0070403
600 Ga0495684_0107301
601 Ga0495593_0003171
602 Ga0495602_0002160
603 Ga0495602_0016531
604 Ga0495602_0051056
605 Ga0495602_0055488
606 Ga0495602_0121855
607 Ga0495614_0018529
608 Ga0496102_0057467
609 Ga0496106_0050035
610 Ga0496112_0028495
611 Ga0496112_0072434
612 Ga0496114_0014120
613 Ga0496115_0006639
614 Ga0496115_0039526
615 Ga0496115_0141370
616 nmdc:mga0n895_36350_c1
617 nmdc:mga0rr50_159217_c1
618 nmdc:mga0rr50_74949_c1
619 nmdc:mga08x19_162_c1
620 nmdc:mga08x19_9421_c1
621 Ga0495612_0002713
622 Ga0495619_0043308
623 Ga0495619_0064231
624 Ga0587080_000710
625 Ga0587075_000530
626 Ga0587079_001380
627 8002323692
628 8054798525

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01676

Metalloenzyme

Metalloenzyme superfamily

9

374

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
4lrb-assembly1.cif.gz_A phosphopentomutase s154g variant soaked with 2,3-dideoxyribose 5-phosphate 0.9553 5 390
4lrc-assembly3.cif.gz_C phosphopentomutase v158l variant 0.9538 6 390
4lr8-assembly3.cif.gz_C phosphopentomutase s154a variant soaked with ribose 5-phosphate 0.9528 6 390
3un3-assembly3.cif.gz_C phosphopentomutase t85q variant soaked with glucose 1,6-bisphosphate 0.9508 6 390
3uny-assembly6.cif.gz_F bacillus cereus phosphopentomutase t85e variant soaked with glucose 1,6-bisphosphate 0.9499 5 390
ID Description Score Start End Superfamily
3unyE02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Phosphopentomutase 0.9533 100 217 3.30.70.1250
3unyE01 Alpha Beta;3-Layer(aba) Sandwich;Alkaline Phosphatase, subunit A;Alkaline Phosphatase, subunit A 0.9424 5 390 3.40.720.10
3unyE02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Phosphopentomutase 0.9379 100 217 3.30.70.1250
3unyE01 Alpha Beta;3-Layer(aba) Sandwich;Alkaline Phosphatase, subunit A;Alkaline Phosphatase, subunit A 0.9323 5 390 3.40.720.10
2i09A02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Phosphopentomutase 0.9081 100 217 3.30.70.1250
ID Description Score Start End GO Terms
AF-A0A352JP90-F1-model_v4 Phosphopentomutase (EC 5.4.2.7) 0.9911 147 208 GO:0000287
GO:0005829
GO:0008973
GO:0009117
GO:0043094
AF-A0A350NS64-F1-model_v4 Phosphopentomutase (EC 5.4.2.7) 0.9887 116 187 GO:0000287
GO:0005829
GO:0008973
GO:0009117
GO:0043094
AF-A0A3D4QQ35-F1-model_v4 Phosphopentomutase (EC 5.4.2.7) 0.9827 95 194 GO:0000287
GO:0005829
GO:0008973
GO:0009117
GO:0043094
AF-A0A658JKF0-F1-model_v4 deleted 0.9734 15 230
AF-H6CPG6-F1-model_v4 deleted 0.973 95 232

Map