F402536

General Info

Members Datasets Scaffolds Average Seq Length
314 173 626 333

Family's Representative Sequence

Representative Sequence 3300005338|Ga0068868_100010363|Ga0068868_1000103633
Length 364
Sequence MARVLVTGGAGYVGSVCSQQLLQSGHEVVVIDDLSTGHPEAVPVKAAFYRVDYGDREAVRRVLHQHPIDAVFHFAAKALIPESVSNPGFFFDVNVASGIAFLEVLREVGVKRFVLSSSAAVYGNPSSVPIREDDRKEPVNSYGETKLMLERVLRWYASAYGWVVAAFRYFNASGATPEAGENHRPETHVIPLLLEVAAGERSHFEIYGDDYATPDGTCIRDYVHVSDIAGAHLAALNMCDTHEMKAYNIGTGTAYSVKEVIGAVEEVTGTRIPVRVAPRRAGDPAILCASPEKLKSELGWTPTGSDLTAIVRSAWAWKTSTPIPTDPATRDFLPPAFSGEYQSPTARPFCRDDCAPGQEPSRHS

Samples

Sample ID Description Type Environment
1 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
2 3300004800 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
3 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
19 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
20 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
21 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
28 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
38 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
39 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
40 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
41 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
42 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
43 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
44 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
45 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
46 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
47 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
48 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
49 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
50 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
52 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
53 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
54 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
55 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
56 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
57 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
58 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
59 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
61 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
62 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
64 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
66 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
67 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
68 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
69 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
70 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
71 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
72 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
73 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
74 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
75 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
76 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
77 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
78 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
79 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
80 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
81 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
82 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
83 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
123 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
125 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
126 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
127 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
128 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
129 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
130 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
131 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
132 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
133 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
134 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
135 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
136 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
137 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
138 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
139 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
140 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
141 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
142 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
143 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
144 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
145 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
146 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
147 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
150 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
151 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
152 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
153 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
154 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
155 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
156 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
157 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
158 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
159 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
160 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
161 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
162 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
163 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
164 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
165 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
166 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
167 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
168 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
169 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
170 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
171 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
172 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
173 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.04
Metatranscriptomes 0.96
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.37
Nodule 0
Rhizoplane 6.05
Rhizosphere 87.58
Stem 0
Stem Tuber 0
Unclassified 3.18

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068868_100010363 3300005338 Bacteria 6745
2 Ga0058861_12069073 3300004800 Bacteria 2789
3 Ga0058862_11491075 3300004803 Bacteria 1660
4 Ga0058862_11955409 3300004803 Bacteria 1969
5 Ga0065712_10068840 3300005290 Bacteria 8818
6 Ga0065715_10103359 3300005293 Bacteria 3039
7 Ga0065707_10015673 3300005295 Bacteria 1944
8 Ga0070690_100149934 3300005330 Bacteria 1590
9 Ga0070670_100013459 3300005331 Bacteria 7008
10 Ga0068869_100010799 3300005334 Bacteria 5968
11 Ga0070680_100038142 3300005336 Bacteria 3885
12 Ga0068868_100004898 3300005338 Bacteria 9402
13 Ga0068868_100029033 3300005338 Bacteria 4235
14 Ga0070660_100028079 3300005339 Bacteria 4207
15 Ga0070660_100192080 3300005339 Bacteria 1654
16 Ga0070661_100028641 3300005344 Bacteria 4018
17 Ga0070661_100113145 3300005344 Bacteria 2028
18 Ga0070669_100003029 3300005353 Bacteria 12086
19 Ga0070669_100091761 3300005353 Bacteria 2278
20 Ga0070669_100110942 3300005353 Bacteria 2081
21 Ga0070674_100005032 3300005356 Bacteria 7593
22 Ga0070673_100198660 3300005364 Bacteria 1726
23 Ga0070659_100068818 3300005366 Bacteria 2809
24 Ga0070667_100446946 3300005367 Bacteria 1181
25 Ga0070709_10047217 3300005434 Bacteria 2681
26 Ga0070709_10189729 3300005434 Unclassified 1449
27 Ga0070714_100016322 3300005435 Bacteria 5992
28 Ga0070714_100016324 3300005435 Bacteria 5992
29 Ga0070714_100068596 3300005435 Bacteria 3060
30 Ga0070714_100379934 3300005435 Bacteria 1332
31 Ga0070713_100016967 3300005436 Bacteria 5490
32 Ga0070713_100045999 3300005436 Bacteria 3579
33 Ga0070713_100189760 3300005436 Bacteria 1851
34 Ga0070710_10133771 3300005437 Bacteria 1514
35 Ga0070710_10153113 3300005437 Unclassified 1423
36 Ga0070681_10000376 3300005458 Bacteria 36045
37 Ga0070681_10000757 3300005458 Bacteria 26829
38 Ga0070681_10007043 3300005458 Bacteria 10950
39 Ga0070681_10309603 3300005458 Bacteria 1489
40 Ga0068867_100006447 3300005459 Bacteria 8285
41 Ga0068867_100036811 3300005459 Bacteria 3554
42 Ga0068867_100055245 3300005459 Bacteria 2936
43 Ga0068867_100255505 3300005459 Bacteria 1427
44 Ga0070679_100009690 3300005530 Bacteria 9112
45 Ga0070679_100092889 3300005530 Bacteria 3005
46 Ga0070679_100440453 3300005530 Bacteria 1248
47 Ga0070679_100569423 3300005530 Bacteria 1076
48 Ga0070684_100045593 3300005535 Bacteria 3796
49 Ga0070684_100049419 3300005535 Bacteria 3650
50 Ga0068853_100018216 3300005539 Bacteria 5810
51 Ga0068853_100031014 3300005539 Bacteria 4519
52 Ga0070695_100001923 3300005545 Bacteria 11758
53 Ga0070693_100011356 3300005547 Bacteria 4486
54 Ga0070693_100187957 3300005547 Unclassified 1334
55 Ga0068855_100001005 3300005563 Bacteria 35183
56 Ga0068855_100003135 3300005563 Bacteria 20218
57 Ga0068855_100011841 3300005563 Bacteria 10546
58 Ga0068855_100023392 3300005563 Bacteria 7401
59 Ga0070664_100001580 3300005564 Bacteria 18213
60 Ga0068857_100016410 3300005577 Bacteria 6490
61 Ga0068854_100022783 3300005578 Bacteria 4273
62 Ga0068854_100030389 3300005578 Bacteria 3747
63 Ga0068854_100039505 3300005578 Bacteria 3325
64 Ga0068854_100041610 3300005578 Bacteria 3247
65 Ga0068856_100000109 3300005614 Bacteria 81443
66 Ga0068856_100000642 3300005614 Bacteria 37918
67 Ga0068856_100001374 3300005614 Bacteria 25583
68 Ga0068856_100008683 3300005614 Bacteria 9884
69 Ga0068856_100009284 3300005614 Bacteria 9554
70 Ga0068852_100008809 3300005616 Bacteria 7465
71 Ga0068852_100134673 3300005616 Bacteria 2280
72 Ga0068852_100204166 3300005616 Bacteria 1871
73 Ga0068852_100463087 3300005616 Bacteria 1257
74 Ga0068859_100001865 3300005617 Bacteria 21448
75 Ga0068864_100000205 3300005618 Bacteria 53524
76 Ga0068866_10004738 3300005718 Bacteria 5582
77 Ga0068863_100044674 3300005841 Bacteria 4204
78 Ga0068863_100091172 3300005841 Bacteria 2890
79 Ga0068858_100005424 3300005842 Bacteria 12496
80 Ga0068858_100019063 3300005842 Bacteria 6418
81 Ga0068858_100141939 3300005842 Bacteria 2255
82 Ga0068860_100060393 3300005843 Bacteria 3603
83 Ga0068860_100313975 3300005843 Bacteria 1537
84 Ga0068862_100142630 3300005844 Bacteria 2127
85 Ga0081455_10070771 3300005937 Bacteria 2895
86 Ga0070717_10132513 3300006028 Bacteria 2144
87 Ga0075365_10014632 3300006038 Bacteria 4725
88 Ga0075368_10010287 3300006042 Bacteria 3380
89 Ga0075364_10000220 3300006051 Bacteria 27023
90 Ga0075364_10021519 3300006051 Bacteria 4066
91 Ga0075362_10079314 3300006177 Bacteria 1511
92 Ga0075367_10008853 3300006178 Bacteria 5235
93 Ga0075366_10002254 3300006195 Bacteria 9852
94 Ga0075366_10008276 3300006195 Bacteria 5776
95 Ga0097621_100000231 3300006237 Bacteria 37411
96 Ga0097621_100000734 3300006237 Bacteria 22951
97 Ga0097621_100019087 3300006237 Bacteria 5257
98 Ga0097621_100275823 3300006237 Bacteria 1479
99 Ga0075370_10034990 3300006353 Bacteria 2817
100 Ga0068871_100000367 3300006358 Bacteria 31470
101 Ga0068871_100000413 3300006358 Bacteria 29511
102 Ga0068871_100027776 3300006358 Bacteria 4429
103 Ga0075428_100117831 3300006844 Bacteria 2893
104 Ga0075430_100008312 3300006846 Bacteria 8766
105 Ga0075431_100471329 3300006847 Bacteria 1249
106 Ga0075433_10043462 3300006852 Bacteria 3900
107 Ga0075433_10050264 3300006852 Bacteria 3629
108 Ga0075433_10138271 3300006852 Bacteria 2165
109 Ga0075434_100005386 3300006871 Bacteria 11645
110 Ga0075434_100144576 3300006871 Bacteria 2398
111 Ga0075436_100045319 3300006914 Bacteria 3033
112 Ga0075436_100142449 3300006914 Bacteria 1685
113 Ga0097620_100001865 3300006931 Bacteria 21448
114 Ga0075435_100038177 3300007076 Unclassified 3829
115 Ga0075435_100133364 3300007076 Bacteria 2079
116 Ga0105240_10062573 3300009093 Bacteria 4633
117 Ga0105240_10087863 3300009093 Bacteria 3805
118 Ga0105240_10171338 3300009093 Bacteria 2571
119 Ga0105240_10220072 3300009093 Bacteria 2212
120 Ga0111539_10092754 3300009094 Bacteria 3548
121 Ga0111539_10529550 3300009094 Bacteria 1373
122 Ga0105245_10000453 3300009098 Bacteria 37642
123 Ga0105245_10033353 3300009098 Bacteria 4563
124 Ga0105245_10040928 3300009098 Bacteria 4130
125 Ga0105245_10093600 3300009098 Bacteria 2769
126 Ga0114129_10017611 3300009147 Bacteria 10169
127 Ga0114129_10039445 3300009147 Bacteria 6658
128 Ga0114129_10043218 3300009147 Bacteria 6340
129 Ga0114129_10138250 3300009147 Bacteria 3342
130 Ga0105243_10018307 3300009148 Bacteria 5303
131 Ga0105241_10008129 3300009174 Bacteria 7725
132 Ga0105241_10149127 3300009174 Unclassified 1911
133 Ga0105242_10118200 3300009176 Bacteria 2270
134 Ga0105242_10248458 3300009176 Bacteria 1602
135 Ga0105242_10449051 3300009176 Unclassified 1215
136 Ga0105248_10095464 3300009177 Bacteria 3348
137 Ga0105248_10406081 3300009177 Bacteria 1534
138 Ga0105237_10088993 3300009545 Bacteria 3077
139 Ga0105237_10091210 3300009545 Bacteria 3036
140 Ga0105237_10246608 3300009545 Bacteria 1788
141 Ga0105238_10041111 3300009551 Bacteria 4683
142 Ga0105238_10048640 3300009551 Bacteria 4272
143 Ga0105238_10138046 3300009551 Bacteria 2416
144 Ga0105238_10197322 3300009551 Bacteria 1988
145 Ga0105249_10089540 3300009553 Bacteria 2876
146 Ga0105239_10100454 3300010375 Unclassified 3200
147 Ga0105246_10019973 3300011119 Bacteria 4293
148 Ga0157373_10037438 3300013100 Bacteria 3477
149 Ga0157373_10063217 3300013100 Bacteria 2621
150 Ga0157370_10105148 3300013104 Bacteria 2642
151 Ga0157370_10232065 3300013104 Bacteria 1708
152 Ga0157369_10019236 3300013105 Bacteria 7641
153 Ga0157369_10185354 3300013105 Bacteria 2189
154 Ga0157369_10209328 3300013105 Bacteria 2044
155 Ga0157374_10000186 3300013296 Bacteria 58108
156 Ga0157374_10352788 3300013296 Bacteria 1462
157 Ga0157378_10000143 3300013297 Bacteria 67028
158 Ga0157372_10001656 3300013307 Bacteria 24169
159 Ga0157372_10162739 3300013307 Bacteria 2579
160 Ga0157372_10246514 3300013307 Bacteria 2073
161 Ga0163163_10065413 3300014325 Bacteria 3609
162 Ga0157379_10017147 3300014968 Bacteria 6378
163 Ga0157379_10135059 3300014968 Bacteria 2222
164 Ga0157376_10583516 3300014969 Bacteria 1110
165 Ga0207692_10095543 3300025898 Unclassified 1621
166 Ga0207654_10154861 3300025911 Unclassified 1475
167 Ga0207707_10000521 3300025912 Bacteria 39383
168 Ga0207707_10037638 3300025912 Bacteria 4228
169 Ga0207707_10058323 3300025912 Bacteria 3360
170 Ga0207707_10200051 3300025912 Bacteria 1742
171 Ga0207695_10007038 3300025913 Bacteria 14432
172 Ga0207695_10012380 3300025913 Bacteria 10244
173 Ga0207695_10065495 3300025913 Bacteria 3736
174 Ga0207663_10060480 3300025916 Bacteria 2401
175 Ga0207660_10175446 3300025917 Bacteria 1661
176 Ga0207657_10012718 3300025919 Bacteria 8291
177 Ga0207657_10099096 3300025919 Bacteria 2421
178 Ga0207652_10013797 3300025921 Bacteria 6536
179 Ga0207652_10091059 3300025921 Bacteria 2681
180 Ga0207652_10188636 3300025921 Bacteria 1854
181 Ga0207646_10260934 3300025922 Bacteria 1566
182 Ga0207681_10250463 3300025923 Bacteria 1383
183 Ga0207694_10000649 3300025924 Bacteria 31393
184 Ga0207694_10083964 3300025924 Bacteria 2505
185 Ga0207650_10009620 3300025925 Bacteria 6610
186 Ga0207687_10107464 3300025927 Bacteria 2064
187 Ga0207687_10193033 3300025927 Bacteria 1586
188 Ga0207700_10002917 3300025928 Bacteria 9857
189 Ga0207700_10003231 3300025928 Bacteria 9413
190 Ga0207700_10024257 3300025928 Bacteria 4195
191 Ga0207700_10034473 3300025928 Bacteria 3634
192 Ga0207664_10010186 3300025929 Bacteria 6637
193 Ga0207664_10055453 3300025929 Bacteria 3145
194 Ga0207690_10095192 3300025932 Bacteria 2115
195 Ga0207706_10128881 3300025933 Bacteria 2225
196 Ga0207709_10065331 3300025935 Bacteria 2288
197 Ga0207669_10083849 3300025937 Bacteria 2051
198 Ga0207704_10207023 3300025938 Bacteria 1441
199 Ga0207665_10167865 3300025939 Bacteria 1583
200 Ga0207711_10036352 3300025941 Bacteria 4179
201 Ga0207711_10063126 3300025941 Bacteria 3197
202 Ga0207711_10197401 3300025941 Bacteria 1835
203 Ga0207689_10027500 3300025942 Bacteria 4760
204 Ga0207661_10010178 3300025944 Bacteria 6762
205 Ga0207679_10000905 3300025945 Bacteria 18939
206 Ga0207679_10113318 3300025945 Bacteria 2145
207 Ga0207667_10004854 3300025949 Bacteria 16436
208 Ga0207667_10026200 3300025949 Bacteria 6373
209 Ga0207667_10031075 3300025949 Bacteria 5768
210 Ga0207667_10134024 3300025949 Bacteria 2551
211 Ga0207712_10127571 3300025961 Bacteria 1934
212 Ga0207640_10007838 3300025981 Bacteria 5894
213 Ga0207640_10010285 3300025981 Bacteria 5265
214 Ga0207640_10046716 3300025981 Bacteria 2788
215 Ga0207677_10006053 3300026023 Bacteria 6599
216 Ga0207677_10058363 3300026023 Bacteria 2657
217 Ga0207703_10000621 3300026035 Bacteria 35796
218 Ga0207703_10008149 3300026035 Bacteria 8279
219 Ga0207703_10061496 3300026035 Bacteria 3074
220 Ga0207703_10117448 3300026035 Bacteria 2279
221 Ga0207703_10304526 3300026035 Bacteria 1455
222 Ga0207639_10053370 3300026041 Bacteria 3084
223 Ga0207639_10054718 3300026041 Bacteria 3051
224 Ga0207639_10174379 3300026041 Bacteria 1824
225 Ga0207639_10207573 3300026041 Bacteria 1684
226 Ga0207639_10533459 3300026041 Bacteria 1076
227 Ga0207708_10070193 3300026075 Bacteria 2682
228 Ga0207702_10000417 3300026078 Bacteria 48644
229 Ga0207702_10001836 3300026078 Bacteria 20902
230 Ga0207702_10002028 3300026078 Bacteria 19625
231 Ga0207702_10075210 3300026078 Bacteria 2917
232 Ga0207641_10053200 3300026088 Bacteria 3431
233 Ga0207648_10093487 3300026089 Bacteria 2629
234 Ga0207676_10000960 3300026095 Bacteria 22281
235 Ga0207676_10097637 3300026095 Bacteria 2427
236 Ga0207674_10008166 3300026116 Bacteria 12139
237 Ga0207674_10122132 3300026116 Bacteria 2571
238 Ga0207675_100058378 3300026118 Bacteria 3600
239 Ga0207698_10019110 3300026142 Bacteria 4683
240 Ga0207428_10181458 3300027907 Bacteria 1590
241 Ga0268264_10517420 3300028381 Bacteria 1166
242 Ga0307413_10013315 3300031824 Bacteria 4130
243 Ga0307409_100078716 3300031995 Bacteria 2653
244 Ga0307416_100078886 3300032002 Bacteria 2773
245 Ga0373934_0054839 3300035086 Bacteria 1583
246 Ga0373940_0027430 3300035088 Bacteria 1497
247 Ga0373955_0101806 3300035172 Bacteria 1650
248 Ga0373931_0031004 3300035691 Bacteria 2756
249 Ga0373937_0000060 3300036401 Bacteria 98143
250 Ga0373937_0036127 3300036401 Unclassified 4501
251 Ga0373937_0040720 3300036401 Bacteria 4236
252 Ga0373925_0015604 3300037068 Bacteria 5496
253 Ga0466963_0264072 3300044694 Bacteria 1209
254 Ga0495630_0157404 3300046517 Bacteria 1729
255 Ga0495645_0002115 3300046543 Bacteria 13481
256 Ga0495635_0151843 3300046663 Bacteria 1577
257 Ga0495623_0026828 3300046679 Bacteria 3707
258 Ga0495674_0026836 3300047319 Bacteria 5268
259 Ga0496101_0038727 3300048904 Bacteria 3387
260 Ga0496102_0085078 3300048905 Bacteria 2920
261 Ga0496104_0035813 3300048907 Bacteria 4636
262 Ga0496104_0114325 3300048907 Bacteria 2588
263 Ga0496104_0181664 3300048907 Bacteria 2014
264 Ga0496105_0005000 3300048908 Bacteria 10037
265 Ga0496105_0218785 3300048908 Bacteria 1551
266 Ga0496110_0206146 3300048913 Bacteria 1787
267 Ga0496110_0421345 3300048913 Bacteria 1217
268 Ga0496112_0003290 3300048915 Bacteria 13339
269 Ga0496112_0013797 3300048915 Bacteria 7474
270 Ga0496112_0039104 3300048915 Bacteria 4634
271 Ga0496112_0141311 3300048915 Bacteria 2377
272 Ga0496112_0176948 3300048915 Bacteria 2098
273 Ga0496112_0486934 3300048915 Bacteria 1169
274 Ga0496113_0314359 3300048916 Bacteria 1255
275 Ga0496114_0013097 3300048917 Bacteria 6643
276 Ga0496114_0069207 3300048917 Bacteria 2964
277 Ga0496114_0083956 3300048917 Bacteria 2696
278 Ga0501034_0179706 3300049571 Bacteria 2081
279 Ga0501047_0157950 3300049581 Bacteria 2140
280 Ga0501067_0082131 3300049583 Bacteria 1787
281 Ga0501071_0014656 3300049587 Bacteria 5365
282 Ga0501072_0017306 3300049588 Bacteria 5540
283 Ga0501074_0020059 3300049590 Bacteria 4858
284 Ga0501076_0079884 3300049592 Bacteria 2625
285 Ga0501080_0036924 3300049742 Bacteria 4562
286 nmdc:mga03683_1327_c1 3300050489 Bacteria 7327
287 nmdc:mga00v17_2313_c2 3300050491 Bacteria 6706
288 nmdc:mga00v17_5949_c1 3300050491 Bacteria 6453
289 nmdc:mga0yw44_41544_c1 3300050492 Bacteria 2738
290 nmdc:mga0k408_7433_c1 3300050493 Bacteria 5849
291 nmdc:mga0k408_8422_c1 3300050493 Bacteria 5534
292 nmdc:mga05p37_10317_c1 3300050507 Bacteria 11093
293 nmdc:mga05p37_291348_c1 3300050507 Bacteria 1943
294 nmdc:mga05p37_361382_c1 3300050507 Bacteria 1707
295 nmdc:mga0qj67_15274_c1 3300050509 Bacteria 5813
296 nmdc:mga06r32_42800_c1 3300050510 Bacteria 4308
297 nmdc:mga08y16_151149_c1 3300050511 Bacteria 2413
298 nmdc:mga0n895_127059_c1 3300050512 Bacteria 2573
299 nmdc:mga0n895_326579_c1 3300050512 Bacteria 1554
300 nmdc:mga0n895_4646_c1 3300050512 Bacteria 11326
301 nmdc:mga0rr50_284510_c1 3300050513 Bacteria 1380
302 nmdc:mga08x19_38469_c2 3300050514 Bacteria 1960
303 nmdc:mga0a205_112636_c1 3300050515 Bacteria 2620
304 nmdc:mga0a205_114026_c1 3300050515 Bacteria 2601
305 nmdc:mga0a205_77804_c1 3300050515 Bacteria 3205
306 Ga0495595_0023362 3300053084 Bacteria 2721
307 Ga0495619_0112036 3300053085 Bacteria 1865
308 Ga0500555_000056 3300053103 Bacteria 58261
309 Ga0500555_000977 3300053103 Bacteria 9875
310 Ga0500616_0000056 3300053153 Bacteria 281579
311 Ga0500645_000405 3300053730 Bacteria 30186
312 Ga0501084_0219716 3300054114 Bacteria 1603
313 Ga0530510_0266288 3300061734 Bacteria 1279
314 Ga0068868_100010363
315 Ga0058861_12069073
316 Ga0058862_11491075
317 Ga0058862_11955409
318 Ga0065712_10068840
319 Ga0065715_10103359
320 Ga0065707_10015673
321 Ga0070690_100149934
322 Ga0070670_100013459
323 Ga0068869_100010799
324 Ga0070680_100038142
325 Ga0068868_100004898
326 Ga0068868_100029033
327 Ga0070660_100028079
328 Ga0070660_100192080
329 Ga0070661_100028641
330 Ga0070661_100113145
331 Ga0070669_100003029
332 Ga0070669_100091761
333 Ga0070669_100110942
334 Ga0070674_100005032
335 Ga0070673_100198660
336 Ga0070659_100068818
337 Ga0070667_100446946
338 Ga0070709_10047217
339 Ga0070709_10189729
340 Ga0070714_100016322
341 Ga0070714_100016324
342 Ga0070714_100068596
343 Ga0070714_100379934
344 Ga0070713_100016967
345 Ga0070713_100045999
346 Ga0070713_100189760
347 Ga0070710_10133771
348 Ga0070710_10153113
349 Ga0070681_10000376
350 Ga0070681_10000757
351 Ga0070681_10007043
352 Ga0070681_10309603
353 Ga0068867_100006447
354 Ga0068867_100036811
355 Ga0068867_100055245
356 Ga0068867_100255505
357 Ga0070679_100009690
358 Ga0070679_100092889
359 Ga0070679_100440453
360 Ga0070679_100569423
361 Ga0070684_100045593
362 Ga0070684_100049419
363 Ga0068853_100018216
364 Ga0068853_100031014
365 Ga0070695_100001923
366 Ga0070693_100011356
367 Ga0070693_100187957
368 Ga0068855_100001005
369 Ga0068855_100003135
370 Ga0068855_100011841
371 Ga0068855_100023392
372 Ga0070664_100001580
373 Ga0068857_100016410
374 Ga0068854_100022783
375 Ga0068854_100030389
376 Ga0068854_100039505
377 Ga0068854_100041610
378 Ga0068856_100000109
379 Ga0068856_100000642
380 Ga0068856_100001374
381 Ga0068856_100008683
382 Ga0068856_100009284
383 Ga0068852_100008809
384 Ga0068852_100134673
385 Ga0068852_100204166
386 Ga0068852_100463087
387 Ga0068859_100001865
388 Ga0068864_100000205
389 Ga0068866_10004738
390 Ga0068863_100044674
391 Ga0068863_100091172
392 Ga0068858_100005424
393 Ga0068858_100019063
394 Ga0068858_100141939
395 Ga0068860_100060393
396 Ga0068860_100313975
397 Ga0068862_100142630
398 Ga0081455_10070771
399 Ga0070717_10132513
400 Ga0075365_10014632
401 Ga0075368_10010287
402 Ga0075364_10000220
403 Ga0075364_10021519
404 Ga0075362_10079314
405 Ga0075367_10008853
406 Ga0075366_10002254
407 Ga0075366_10008276
408 Ga0097621_100000231
409 Ga0097621_100000734
410 Ga0097621_100019087
411 Ga0097621_100275823
412 Ga0075370_10034990
413 Ga0068871_100000367
414 Ga0068871_100000413
415 Ga0068871_100027776
416 Ga0075428_100117831
417 Ga0075430_100008312
418 Ga0075431_100471329
419 Ga0075433_10043462
420 Ga0075433_10050264
421 Ga0075433_10138271
422 Ga0075434_100005386
423 Ga0075434_100144576
424 Ga0075436_100045319
425 Ga0075436_100142449
426 Ga0097620_100001865
427 Ga0075435_100038177
428 Ga0075435_100133364
429 Ga0105240_10062573
430 Ga0105240_10087863
431 Ga0105240_10171338
432 Ga0105240_10220072
433 Ga0111539_10092754
434 Ga0111539_10529550
435 Ga0105245_10000453
436 Ga0105245_10033353
437 Ga0105245_10040928
438 Ga0105245_10093600
439 Ga0114129_10017611
440 Ga0114129_10039445
441 Ga0114129_10043218
442 Ga0114129_10138250
443 Ga0105243_10018307
444 Ga0105241_10008129
445 Ga0105241_10149127
446 Ga0105242_10118200
447 Ga0105242_10248458
448 Ga0105242_10449051
449 Ga0105248_10095464
450 Ga0105248_10406081
451 Ga0105237_10088993
452 Ga0105237_10091210
453 Ga0105237_10246608
454 Ga0105238_10041111
455 Ga0105238_10048640
456 Ga0105238_10138046
457 Ga0105238_10197322
458 Ga0105249_10089540
459 Ga0105239_10100454
460 Ga0105246_10019973
461 Ga0157373_10037438
462 Ga0157373_10063217
463 Ga0157370_10105148
464 Ga0157370_10232065
465 Ga0157369_10019236
466 Ga0157369_10185354
467 Ga0157369_10209328
468 Ga0157374_10000186
469 Ga0157374_10352788
470 Ga0157378_10000143
471 Ga0157372_10001656
472 Ga0157372_10162739
473 Ga0157372_10246514
474 Ga0163163_10065413
475 Ga0157379_10017147
476 Ga0157379_10135059
477 Ga0157376_10583516
478 Ga0207692_10095543
479 Ga0207654_10154861
480 Ga0207707_10000521
481 Ga0207707_10037638
482 Ga0207707_10058323
483 Ga0207707_10200051
484 Ga0207695_10007038
485 Ga0207695_10012380
486 Ga0207695_10065495
487 Ga0207663_10060480
488 Ga0207660_10175446
489 Ga0207657_10012718
490 Ga0207657_10099096
491 Ga0207652_10013797
492 Ga0207652_10091059
493 Ga0207652_10188636
494 Ga0207646_10260934
495 Ga0207681_10250463
496 Ga0207694_10000649
497 Ga0207694_10083964
498 Ga0207650_10009620
499 Ga0207687_10107464
500 Ga0207687_10193033
501 Ga0207700_10002917
502 Ga0207700_10003231
503 Ga0207700_10024257
504 Ga0207700_10034473
505 Ga0207664_10010186
506 Ga0207664_10055453
507 Ga0207690_10095192
508 Ga0207706_10128881
509 Ga0207709_10065331
510 Ga0207669_10083849
511 Ga0207704_10207023
512 Ga0207665_10167865
513 Ga0207711_10036352
514 Ga0207711_10063126
515 Ga0207711_10197401
516 Ga0207689_10027500
517 Ga0207661_10010178
518 Ga0207679_10000905
519 Ga0207679_10113318
520 Ga0207667_10004854
521 Ga0207667_10026200
522 Ga0207667_10031075
523 Ga0207667_10134024
524 Ga0207712_10127571
525 Ga0207640_10007838
526 Ga0207640_10010285
527 Ga0207640_10046716
528 Ga0207677_10006053
529 Ga0207677_10058363
530 Ga0207703_10000621
531 Ga0207703_10008149
532 Ga0207703_10061496
533 Ga0207703_10117448
534 Ga0207703_10304526
535 Ga0207639_10053370
536 Ga0207639_10054718
537 Ga0207639_10174379
538 Ga0207639_10207573
539 Ga0207639_10533459
540 Ga0207708_10070193
541 Ga0207702_10000417
542 Ga0207702_10001836
543 Ga0207702_10002028
544 Ga0207702_10075210
545 Ga0207641_10053200
546 Ga0207648_10093487
547 Ga0207676_10000960
548 Ga0207676_10097637
549 Ga0207674_10008166
550 Ga0207674_10122132
551 Ga0207675_100058378
552 Ga0207698_10019110
553 Ga0207428_10181458
554 Ga0268264_10517420
555 Ga0307413_10013315
556 Ga0307409_100078716
557 Ga0307416_100078886
558 Ga0373934_0054839
559 Ga0373940_0027430
560 Ga0373955_0101806
561 Ga0373931_0031004
562 Ga0373937_0000060
563 Ga0373937_0036127
564 Ga0373937_0040720
565 Ga0373925_0015604
566 Ga0466963_0264072
567 Ga0495630_0157404
568 Ga0495645_0002115
569 Ga0495635_0151843
570 Ga0495623_0026828
571 Ga0495674_0026836
572 Ga0496101_0038727
573 Ga0496102_0085078
574 Ga0496104_0035813
575 Ga0496104_0114325
576 Ga0496104_0181664
577 Ga0496105_0005000
578 Ga0496105_0218785
579 Ga0496110_0206146
580 Ga0496110_0421345
581 Ga0496112_0003290
582 Ga0496112_0013797
583 Ga0496112_0039104
584 Ga0496112_0141311
585 Ga0496112_0176948
586 Ga0496112_0486934
587 Ga0496113_0314359
588 Ga0496114_0013097
589 Ga0496114_0069207
590 Ga0496114_0083956
591 Ga0501034_0179706
592 Ga0501047_0157950
593 Ga0501067_0082131
594 Ga0501071_0014656
595 Ga0501072_0017306
596 Ga0501074_0020059
597 Ga0501076_0079884
598 Ga0501080_0036924
599 nmdc:mga03683_1327_c1
600 nmdc:mga00v17_2313_c2
601 nmdc:mga00v17_5949_c1
602 nmdc:mga0yw44_41544_c1
603 nmdc:mga0k408_7433_c1
604 nmdc:mga0k408_8422_c1
605 nmdc:mga05p37_10317_c1
606 nmdc:mga05p37_291348_c1
607 nmdc:mga05p37_361382_c1
608 nmdc:mga0qj67_15274_c1
609 nmdc:mga06r32_42800_c1
610 nmdc:mga08y16_151149_c1
611 nmdc:mga0n895_127059_c1
612 nmdc:mga0n895_326579_c1
613 nmdc:mga0n895_4646_c1
614 nmdc:mga0rr50_284510_c1
615 nmdc:mga08x19_38469_c2
616 nmdc:mga0a205_112636_c1
617 nmdc:mga0a205_114026_c1
618 nmdc:mga0a205_77804_c1
619 Ga0495595_0023362
620 Ga0495619_0112036
621 Ga0500555_000056
622 Ga0500555_000977
623 Ga0500616_0000056
624 Ga0500645_000405
625 Ga0501084_0219716
626 Ga0530510_0266288

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

4

250

0.95

PF04321

RmlD_sub_bind

RmlD substrate binding domain

2

169

0.94

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

5

313

0.84

PF07993

NAD_binding_4

Male sterility protein

43

213

0.83

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

5

156

0.82

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

4

176

0.77

PF13460

NAD_binding_10

NAD(P)H-binding

8

188

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
2c20-assembly3.cif.gz_F crystal structure of udp-glucose 4-epimerase 0.9751 1 326
4wok-assembly1.cif.gz_A crystal structure of udp-glucose 4-epimerase from brucella ovis in complex with nad 0.9738 2 316
2c20-assembly3.cif.gz_F crystal structure of udp-glucose 4-epimerase 0.9722 1 326
3enk-assembly1.cif.gz_B 1.9a crystal structure of udp-glucose 4-epimerase from burkholderia pseudomallei 0.9708 2 323
7xpq-assembly1.cif.gz_A crystal structure of udp-glc/glcnac 4-epimerase with nad/udp-glcnac 0.9692 2 325
ID Description Score Start End Superfamily
4wokA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9565 2 249 3.40.50.720
2c20A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9563 1 249 3.40.50.720
af_P18645_3_269_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9559 1 249 3.40.50.720
af_M9NFH8_1768_1873_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9559 1 32 3.40.50.720
af_A0A1D6PCE2_262_419_3.90.25.10 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.9543 173 324 3.90.25.10
ID Description Score Start End GO Terms
AF-A0A2V8WCR2-F1-model_v4 UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) 0.9893 1 175 GO:0016853
GO:0033499
AF-A0A1W9LJM9-F1-model_v4 UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) 0.986 2 162 GO:0016853
GO:0033499
AF-A0A353YHY9-F1-model_v4 UDP-glucose 4-epimerase (EC 5.1.3.2) 0.9848 1 289 GO:0003978
GO:0033499
AF-A0A3D3Z994-F1-model_v4 UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) 0.9848 37 175 GO:0016853
GO:0033499
AF-A0A6B1XP79-F1-model_v4 deleted 0.9847 1 248

Map