F401646

General Info

Members Datasets Scaffolds Average Seq Length
312 167 580 394

Family's Representative Sequence

Representative Sequence 3300006173|Ga0070716_100028146|Ga0070716_1000281462
Length 474
Sequence MCAEICRVSNDTLCFIALNLRSDETLSQSLRRLLQVHQTYVVESARPFLRNSPPSGWHSPCSISNKQGSETSLVFHTRGLGEEGLGKMKAAVRHQLDPSIRSTDTRDFESSLRSKIVGQAEGVQSLVDMYQVFCAGLNSPGRPVGNLLFLGPTGSGKTRIVEAAAEILFGDPRAIIKVDCAEFQHSHEIAKLIGSPPGYLGHRETHPLITQEALSASHTDKLKLSFLLFDEIEKASDALWQLLLGILDKATLTLGDNRRVDLSQTVIFLTSNLGGGEITDLMNGGMGFVQPSDKPATGLNEKIERTAVEAARRKFSPEFMNRLDKVVVFHPLKKEQLEEVLEIELEQVQKRVLQTAKGQFLFRVTGAGREFLLQEGTDQRYGARHLKRSIERHVVYPLANLLATDQVQLGDLVCIDWNSEQNRLTFVREGENLAMPSRRPEPAAVARPLPVRNGRSVEAPPVAFGPEGMPRMAR

Samples

Sample ID Description Type Environment
1 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
2 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
3 3300004800 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
4 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
15 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
18 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
19 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
20 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
21 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
22 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
28 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
31 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
32 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
33 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
34 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
35 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
41 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
43 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
44 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
52 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
53 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
54 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
55 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
56 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
57 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
58 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
59 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
64 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
65 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
66 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
67 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
68 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
69 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
101 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
104 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
105 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
106 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
107 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
108 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
109 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
110 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
111 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
112 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
113 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
114 3300033547 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 Metagenome Unclassified
115 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
116 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
117 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
118 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
119 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
120 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
121 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
122 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
123 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
124 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
125 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
126 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
127 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
128 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
129 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
130 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
131 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
132 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
133 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
134 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
135 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
136 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
137 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
138 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
139 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
140 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
141 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
142 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
143 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
144 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
145 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
146 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
147 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
148 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
149 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
150 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
151 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
152 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
153 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
154 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
155 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
156 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
157 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
158 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
159 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
160 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
161 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
162 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
163 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
164 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
165 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
166 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
167 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.12
Metatranscriptomes 2.88
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 3.85
Rhizosphere 95.19
Stem 0
Stem Tuber 0
Unclassified 15.71

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070716_100028146 3300006173 Unclassified 3026
2 Ga0058863_11430232 3300004799 Bacteria 1390
3 Ga0058861_11721942 3300004800 Bacteria 1383
4 Ga0058862_12389299 3300004803 Bacteria 1307
5 Ga0058862_12612089 3300004803 Bacteria 1380
6 Ga0070683_100031879 3300005329 Unclassified 4796
7 Ga0070690_100020810 3300005330 Bacteria 4000
8 Ga0070690_100070607 3300005330 Bacteria 2268
9 Ga0068869_100128591 3300005334 Bacteria 1945
10 Ga0068869_100179602 3300005334 Bacteria 1659
11 Ga0070666_10131043 3300005335 Bacteria 1742
12 Ga0068868_100017204 3300005338 Bacteria 5381
13 Ga0070661_100216316 3300005344 Bacteria 1468
14 Ga0070671_100096862 3300005355 Unclassified 2474
15 Ga0070659_100082886 3300005366 Unclassified 2562
16 Ga0070667_100009315 3300005367 Bacteria 8139
17 Ga0070667_100355020 3300005367 Unclassified 1328
18 Ga0070703_10012792 3300005406 Unclassified 2377
19 Ga0070709_10016159 3300005434 Unclassified 4256
20 Ga0070709_10025230 3300005434 Bacteria 3510
21 Ga0070713_100005179 3300005436 Bacteria 8877
22 Ga0070710_10019290 3300005437 Bacteria 3521
23 Ga0070710_10054460 3300005437 Bacteria 2257
24 Ga0070701_10004489 3300005438 Bacteria 5661
25 Ga0070711_100070100 3300005439 Bacteria 2467
26 Ga0070711_100229717 3300005439 Bacteria 1446
27 Ga0070705_100002649 3300005440 Bacteria 8954
28 Ga0070694_100002012 3300005444 Bacteria 12073
29 Ga0070708_100000342 3300005445 Bacteria 35133
30 Ga0070708_100032632 3300005445 Bacteria 4519
31 Ga0070708_100074759 3300005445 Bacteria 3057
32 Ga0070662_100062103 3300005457 Unclassified 2729
33 Ga0070706_100037497 3300005467 Bacteria 4477
34 Ga0070706_100049079 3300005467 Bacteria 3895
35 Ga0070706_100049706 3300005467 Bacteria 3869
36 Ga0070707_100002063 3300005468 Bacteria 19258
37 Ga0070707_100012231 3300005468 Bacteria 8012
38 Ga0070707_100303604 3300005468 Bacteria 1551
39 Ga0070698_100091365 3300005471 Bacteria 3027
40 Ga0070699_100030776 3300005518 Unclassified 4634
41 Ga0070697_100000426 3300005536 Bacteria 32337
42 Ga0070697_100016091 3300005536 Bacteria 5881
43 Ga0070697_100208037 3300005536 Bacteria 1665
44 Ga0068853_100338827 3300005539 Unclassified 1397
45 Ga0070686_100022238 3300005544 Bacteria 3774
46 Ga0070695_100019061 3300005545 Bacteria 4172
47 Ga0070695_100057445 3300005545 Unclassified 2514
48 Ga0070695_100114225 3300005545 Bacteria 1838
49 Ga0070696_100018442 3300005546 Unclassified 4717
50 Ga0070696_100019806 3300005546 Unclassified 4559
51 Ga0070693_100000032 3300005547 Bacteria 52928
52 Ga0070704_100011311 3300005549 Bacteria 5468
53 Ga0070704_100087915 3300005549 Bacteria 2307
54 Ga0068855_100020392 3300005563 Bacteria 7950
55 Ga0068859_100030747 3300005617 Bacteria 5389
56 Ga0068863_100009290 3300005841 Bacteria 9592
57 Ga0068863_100021915 3300005841 Bacteria 6096
58 Ga0068863_100048101 3300005841 Bacteria 4044
59 Ga0068858_100008249 3300005842 Bacteria 10013
60 Ga0068858_100010661 3300005842 Bacteria 8693
61 Ga0068860_100009678 3300005843 Bacteria 9573
62 Ga0068860_100014989 3300005843 Bacteria 7576
63 Ga0068860_100032900 3300005843 Bacteria 4979
64 Ga0070716_100053083 3300006173 Unclassified 2310
65 Ga0070716_100095264 3300006173 Bacteria 1812
66 Ga0070712_100000603 3300006175 Bacteria 21069
67 Ga0070712_100117927 3300006175 Bacteria 1993
68 Ga0097621_100022649 3300006237 Bacteria 4879
69 Ga0068871_100024510 3300006358 Bacteria 4681
70 Ga0068871_100167167 3300006358 Bacteria 1884
71 Ga0075433_10125199 3300006852 Bacteria 2282
72 Ga0068865_100006033 3300006881 Bacteria 7383
73 Ga0068865_100235186 3300006881 Bacteria 1439
74 Ga0097620_100030748 3300006931 Bacteria 5389
75 Ga0099794_10003058 3300007265 Bacteria 6318
76 Ga0099794_10004882 3300007265 Bacteria 5329
77 Ga0099794_10009040 3300007265 Bacteria 4163
78 Ga0099794_10010398 3300007265 Bacteria 3950
79 Ga0099794_10012209 3300007265 Bacteria 3698
80 Ga0099794_10012300 3300007265 Bacteria 3688
81 Ga0099794_10013133 3300007265 Bacteria 3597
82 Ga0099794_10033782 3300007265 Unclassified 2406
83 Ga0099794_10046227 3300007265 Unclassified 2084
84 Ga0099794_10046301 3300007265 Bacteria 2083
85 Ga0099794_10068431 3300007265 Bacteria 1736
86 Ga0099794_10076001 3300007265 Bacteria 1651
87 Ga0105240_10018753 3300009093 Bacteria 9269
88 Ga0105240_10105822 3300009093 Bacteria 3414
89 Ga0105245_10019808 3300009098 Bacteria 5897
90 Ga0105247_10062681 3300009101 Bacteria 2307
91 Ga0114129_10037892 3300009147 Bacteria 6803
92 Ga0105241_10108758 3300009174 Bacteria 2216
93 Ga0105242_10003072 3300009176 Bacteria 13039
94 Ga0105242_10013465 3300009176 Bacteria 6323
95 Ga0105242_10032934 3300009176 Bacteria 4147
96 Ga0105248_10017981 3300009177 Bacteria 7803
97 Ga0105248_10068600 3300009177 Bacteria 3981
98 Ga0105248_10086258 3300009177 Bacteria 3533
99 Ga0105237_10007775 3300009545 Bacteria 11691
100 Ga0105238_10003009 3300009551 Bacteria 16828
101 Ga0105249_10310374 3300009553 Bacteria 1585
102 Ga0105239_10049110 3300010375 Bacteria 4627
103 Ga0105239_10053064 3300010375 Unclassified 4448
104 Ga0105239_10153049 3300010375 Bacteria 2574
105 Ga0105246_10004238 3300011119 Bacteria 8720
106 Ga0157374_10005591 3300013296 Bacteria 10586
107 Ga0157378_10000216 3300013297 Bacteria 55738
108 Ga0157378_10002054 3300013297 Bacteria 18025
109 Ga0157378_10006361 3300013297 Bacteria 10333
110 Ga0157378_10008282 3300013297 Bacteria 9060
111 Ga0157378_10038466 3300013297 Unclassified 4240
112 Ga0163162_10005703 3300013306 Bacteria 12036
113 Ga0163162_10016388 3300013306 Bacteria 7244
114 Ga0163162_10228641 3300013306 Bacteria 1990
115 Ga0157375_10127517 3300013308 Bacteria 2661
116 Ga0157375_10138186 3300013308 Bacteria 2562
117 Ga0157375_10298238 3300013308 Bacteria 1775
118 Ga0163163_10095008 3300014325 Unclassified 3000
119 Ga0163163_10173471 3300014325 Bacteria 2203
120 Ga0157379_10195382 3300014968 Bacteria 1829
121 Ga0157379_10202253 3300014968 Bacteria 1796
122 Ga0157376_10004009 3300014969 Bacteria 10187
123 Ga0157376_10070532 3300014969 Bacteria 2966
124 Ga0213876_10016969 3300021384 Bacteria 3846
125 Ga0224712_10071780 3300022467 Bacteria 1408
126 Ga0224572_1014992 3300024225 Bacteria 1482
127 Ga0207642_10052146 3300025899 Bacteria 1854
128 Ga0207680_10142453 3300025903 Bacteria 1590
129 Ga0207647_10088711 3300025904 Bacteria 1846
130 Ga0207685_10026342 3300025905 Bacteria 2021
131 Ga0207685_10026649 3300025905 Bacteria 2013
132 Ga0207699_10029276 3300025906 Bacteria 3070
133 Ga0207699_10091263 3300025906 Unclassified 1913
134 Ga0207699_10152405 3300025906 Unclassified 1531
135 Ga0207684_10029697 3300025910 Bacteria 4654
136 Ga0207684_10055440 3300025910 Unclassified 3363
137 Ga0207695_10017136 3300025913 Bacteria 8444
138 Ga0207671_10024414 3300025914 Bacteria 4546
139 Ga0207671_10138350 3300025914 Unclassified 1874
140 Ga0207693_10007284 3300025915 Bacteria 9104
141 Ga0207693_10025470 3300025915 Bacteria 4690
142 Ga0207693_10029440 3300025915 Bacteria 4337
143 Ga0207693_10159256 3300025915 Bacteria 1776
144 Ga0207663_10018515 3300025916 Unclassified 3905
145 Ga0207646_10000019 3300025922 Bacteria 282855
146 Ga0207646_10000039 3300025922 Bacteria 188453
147 Ga0207646_10011164 3300025922 Bacteria 8720
148 Ga0207646_10128428 3300025922 Unclassified 2280
149 Ga0207646_10265697 3300025922 Bacteria 1551
150 Ga0207694_10006243 3300025924 Bacteria 9104
151 Ga0207687_10014151 3300025927 Bacteria 5219
152 Ga0207700_10070719 3300025928 Bacteria 2684
153 Ga0207690_10052535 3300025932 Bacteria 2730
154 Ga0207686_10025695 3300025934 Bacteria 3429
155 Ga0207704_10008446 3300025938 Unclassified 4928
156 Ga0207665_10041178 3300025939 Unclassified 3084
157 Ga0207665_10057440 3300025939 Unclassified 2629
158 Ga0207665_10092817 3300025939 Unclassified 2095
159 Ga0207665_10148185 3300025939 Bacteria 1679
160 Ga0207711_10029991 3300025941 Bacteria 4588
161 Ga0207711_10046519 3300025941 Bacteria 3708
162 Ga0207661_10047134 3300025944 Bacteria 3420
163 Ga0207661_10207772 3300025944 Bacteria 1724
164 Ga0207667_10197148 3300025949 Bacteria 2066
165 Ga0207667_10315985 3300025949 Bacteria 1595
166 Ga0207712_10186162 3300025961 Bacteria 1635
167 Ga0207658_10017671 3300025986 Bacteria 4918
168 Ga0207658_10103149 3300025986 Bacteria 2239
169 Ga0207703_10006301 3300026035 Bacteria 9485
170 Ga0207639_10096040 3300026041 Bacteria 2383
171 Ga0207641_10004399 3300026088 Bacteria 12207
172 Ga0207641_10027319 3300026088 Unclassified 4713
173 Ga0207641_10126809 3300026088 Bacteria 2286
174 Ga0207648_10017398 3300026089 Bacteria 6541
175 Ga0207676_10090238 3300026095 Bacteria 2514
176 Ga0207674_10023295 3300026116 Bacteria 6635
177 Ga0207675_100293047 3300026118 Unclassified 1583
178 Ga0209588_1000947 3300027671 Bacteria 7406
179 Ga0209588_1001762 3300027671 Bacteria 5741
180 Ga0209588_1002884 3300027671 Bacteria 4721
181 Ga0209588_1013700 3300027671 Bacteria 2476
182 Ga0209588_1015319 3300027671 Bacteria 2357
183 Ga0209588_1041354 3300027671 Bacteria 1488
184 Ga0265354_1000096 3300028016 Bacteria 15122
185 Ga0268266_10250593 3300028379 Bacteria 1638
186 Ga0268264_10008137 3300028381 Bacteria 8717
187 Ga0268264_10013862 3300028381 Bacteria 6628
188 Ga0268264_10134262 3300028381 Bacteria 2198
189 Ga0268264_10210936 3300028381 Bacteria 1783
190 Ga0265770_1002940 3300030878 Bacteria 2310
191 Ga0265760_10005966 3300031090 Bacteria 3480
192 Ga0265760_10018142 3300031090 Unclassified 2024
193 Ga0265325_10003416 3300031241 Bacteria 10372
194 Ga0265325_10005081 3300031241 Bacteria 8188
195 Ga0265325_10007585 3300031241 Bacteria 6487
196 Ga0265329_10001965 3300031242 Bacteria 9651
197 Ga0265340_10001389 3300031247 Bacteria 13883
198 Ga0265339_10011822 3300031249 Bacteria 5355
199 Ga0265331_10000172 3300031250 Bacteria 79901
200 Ga0265331_10004452 3300031250 Bacteria 8750
201 Ga0265331_10017822 3300031250 Bacteria 3696
202 Ga0265316_10003212 3300031344 Bacteria 16609
203 Ga0265316_10017959 3300031344 Bacteria 6095
204 Ga0265316_10118078 3300031344 Bacteria 2004
205 Ga0265313_10005239 3300031595 Bacteria 9603
206 Ga0265313_10050857 3300031595 Bacteria 1986
207 Ga0265313_10078869 3300031595 Bacteria 1500
208 Ga0265314_10080569 3300031711 Bacteria 2149
209 Ga0265342_10003067 3300031712 Bacteria 13972
210 Ga0316212_1003885 3300033547 Bacteria 2167
211 Ga0373953_0001044 3300035117 Bacteria 7845
212 Ga0373954_0000086 3300035118 Bacteria 31796
213 Ga0373956_0001970 3300035119 Bacteria 8506
214 Ga0373957_0023245 3300035120 Unclassified 2215
215 Ga0373946_0012754 3300035171 Bacteria 3150
216 Ga0373955_0003542 3300035172 Bacteria 6872
217 Ga0373935_0067294 3300035692 Bacteria 2303
218 Ga0373927_0000078 3300035695 Bacteria 71963
219 Ga0373933_0000773 3300035724 Bacteria 19501
220 Ga0373947_0001445 3300035725 Bacteria 14614
221 Ga0373937_0032133 3300036401 Unclassified 4759
222 Ga0373925_0000127 3300037068 Bacteria 82229
223 Ga0436365_0338536 3300039437 Bacteria 4811
224 Ga0451577_0074340 3300042876 Bacteria 3031
225 Ga0453683_0012204 3300044673 Bacteria 5636
226 Ga0453684_0022304 3300044712 Bacteria 9401
227 Ga0453684_0088778 3300044712 Unclassified 3827
228 Ga0451576_0026106 3300045051 Bacteria 6284
229 Ga0495592_0031503 3300046454 Bacteria 4008
230 Ga0495651_0003022 3300046462 Bacteria 12981
231 Ga0495651_0030688 3300046462 Bacteria 4191
232 Ga0495580_0066139 3300046472 Unclassified 2531
233 Ga0495580_0109966 3300046472 Unclassified 1914
234 Ga0495664_0012806 3300046477 Bacteria 4750
235 Ga0495608_0042975 3300046511 Bacteria 3021
236 Ga0495628_0000473 3300046516 Bacteria 36747
237 Ga0495628_0115145 3300046516 Bacteria 2065
238 Ga0495666_0020371 3300046526 Bacteria 3287
239 Ga0495652_0001122 3300046529 Bacteria 30270
240 Ga0495652_0069604 3300046529 Unclassified 2945
241 Ga0495586_0052535 3300046535 Bacteria 2206
242 Ga0495587_0001997 3300046536 Bacteria 13601
243 Ga0495587_0021408 3300046536 Unclassified 3987
244 Ga0495587_0040338 3300046536 Unclassified 2791
245 Ga0495645_0025797 3300046543 Bacteria 4267
246 Ga0495645_0030051 3300046543 Bacteria 3958
247 Ga0495645_0055056 3300046543 Bacteria 2889
248 Ga0495667_0010431 3300046559 Bacteria 6286
249 Ga0495667_0045294 3300046559 Bacteria 2913
250 Ga0495634_0072084 3300046642 Bacteria 2272
251 Ga0495635_0137832 3300046663 Unclassified 1662
252 Ga0495657_0011069 3300046675 Bacteria 6765
253 Ga0495657_0080239 3300046675 Unclassified 2112
254 Ga0495623_0045290 3300046679 Bacteria 2794
255 Ga0495669_0017707 3300046684 Unclassified 3059
256 Ga0495613_0162609 3300046689 Bacteria 1587
257 Ga0495600_0004337 3300046809 Bacteria 8486
258 Ga0495604_0010343 3300047317 Bacteria 7390
259 Ga0495604_0014378 3300047317 Bacteria 6312
260 Ga0495674_0034531 3300047319 Bacteria 4573
261 Ga0495674_0125507 3300047319 Bacteria 2166
262 Ga0495674_0177615 3300047319 Unclassified 1774
263 Ga0495680_0015583 3300047322 Bacteria 6556
264 Ga0495680_0039585 3300047322 Unclassified 3759
265 Ga0495675_0000181 3300047444 Bacteria 45828
266 Ga0495675_0028719 3300047444 Unclassified 3545
267 Ga0495675_0029657 3300047444 Bacteria 3490
268 Ga0495684_0009183 3300047471 Bacteria 7635
269 Ga0495684_0078351 3300047471 Bacteria 2508
270 Ga0495684_0116084 3300047471 Bacteria 2018
271 Ga0495593_0022814 3300047673 Bacteria 3483
272 Ga0495602_0000541 3300048088 Bacteria 35231
273 Ga0495602_0052837 3300048088 Bacteria 3605
274 Ga0495602_0233009 3300048088 Unclassified 1382
275 Ga0495614_0007944 3300048089 Bacteria 4715
276 Ga0495614_0055672 3300048089 Bacteria 1696
277 Ga0496101_0043126 3300048904 Bacteria 3223
278 Ga0496102_0013643 3300048905 Bacteria 7042
279 Ga0496104_0067411 3300048907 Bacteria 3400
280 Ga0496104_0074377 3300048907 Bacteria 3235
281 Ga0496106_0024421 3300048909 Bacteria 4494
282 Ga0496112_0041601 3300048915 Bacteria 4496
283 Ga0496114_0160777 3300048917 Bacteria 1953
284 Ga0496115_0011691 3300048918 Bacteria 6589
285 Ga0496115_0012346 3300048918 Bacteria 6424
286 Ga0496115_0031169 3300048918 Bacteria 4199
287 Ga0496115_0127629 3300048918 Bacteria 2096
288 Ga0496115_0135839 3300048918 Bacteria 2028
289 nmdc:mga05p37_93072_c1 3300050507 Bacteria 3714
290 Ga0495601_0004463 3300053077 Bacteria 8085
291 Ga0070716_100028146
292 Ga0058863_11430232
293 Ga0058861_11721942
294 Ga0058862_12389299
295 Ga0058862_12612089
296 Ga0070683_100031879
297 Ga0070690_100020810
298 Ga0070690_100070607
299 Ga0068869_100128591
300 Ga0068869_100179602
301 Ga0070666_10131043
302 Ga0068868_100017204
303 Ga0070661_100216316
304 Ga0070671_100096862
305 Ga0070659_100082886
306 Ga0070667_100009315
307 Ga0070667_100355020
308 Ga0070703_10012792
309 Ga0070709_10016159
310 Ga0070709_10025230
311 Ga0070713_100005179
312 Ga0070710_10019290
313 Ga0070710_10054460
314 Ga0070701_10004489
315 Ga0070711_100070100
316 Ga0070711_100229717
317 Ga0070705_100002649
318 Ga0070694_100002012
319 Ga0070708_100000342
320 Ga0070708_100032632
321 Ga0070708_100074759
322 Ga0070662_100062103
323 Ga0070706_100037497
324 Ga0070706_100049079
325 Ga0070706_100049706
326 Ga0070707_100002063
327 Ga0070707_100012231
328 Ga0070707_100303604
329 Ga0070698_100091365
330 Ga0070699_100030776
331 Ga0070697_100000426
332 Ga0070697_100016091
333 Ga0070697_100208037
334 Ga0068853_100338827
335 Ga0070686_100022238
336 Ga0070695_100019061
337 Ga0070695_100057445
338 Ga0070695_100114225
339 Ga0070696_100018442
340 Ga0070696_100019806
341 Ga0070693_100000032
342 Ga0070704_100011311
343 Ga0070704_100087915
344 Ga0068855_100020392
345 Ga0068859_100030747
346 Ga0068863_100009290
347 Ga0068863_100021915
348 Ga0068863_100048101
349 Ga0068858_100008249
350 Ga0068858_100010661
351 Ga0068860_100009678
352 Ga0068860_100014989
353 Ga0068860_100032900
354 Ga0070716_100053083
355 Ga0070716_100095264
356 Ga0070712_100000603
357 Ga0070712_100117927
358 Ga0097621_100022649
359 Ga0068871_100024510
360 Ga0068871_100167167
361 Ga0075433_10125199
362 Ga0068865_100006033
363 Ga0068865_100235186
364 Ga0097620_100030748
365 Ga0099794_10003058
366 Ga0099794_10004882
367 Ga0099794_10009040
368 Ga0099794_10010398
369 Ga0099794_10012209
370 Ga0099794_10012300
371 Ga0099794_10013133
372 Ga0099794_10033782
373 Ga0099794_10046227
374 Ga0099794_10046301
375 Ga0099794_10068431
376 Ga0099794_10076001
377 Ga0105240_10018753
378 Ga0105240_10105822
379 Ga0105245_10019808
380 Ga0105247_10062681
381 Ga0114129_10037892
382 Ga0105241_10108758
383 Ga0105242_10003072
384 Ga0105242_10013465
385 Ga0105242_10032934
386 Ga0105248_10017981
387 Ga0105248_10068600
388 Ga0105248_10086258
389 Ga0105237_10007775
390 Ga0105238_10003009
391 Ga0105249_10310374
392 Ga0105239_10049110
393 Ga0105239_10053064
394 Ga0105239_10153049
395 Ga0105246_10004238
396 Ga0157374_10005591
397 Ga0157378_10000216
398 Ga0157378_10002054
399 Ga0157378_10006361
400 Ga0157378_10008282
401 Ga0157378_10038466
402 Ga0163162_10005703
403 Ga0163162_10016388
404 Ga0163162_10228641
405 Ga0157375_10127517
406 Ga0157375_10138186
407 Ga0157375_10298238
408 Ga0163163_10095008
409 Ga0163163_10173471
410 Ga0157379_10195382
411 Ga0157379_10202253
412 Ga0157376_10004009
413 Ga0157376_10070532
414 Ga0213876_10016969
415 Ga0224712_10071780
416 Ga0224572_1014992
417 Ga0207642_10052146
418 Ga0207680_10142453
419 Ga0207647_10088711
420 Ga0207685_10026342
421 Ga0207685_10026649
422 Ga0207699_10029276
423 Ga0207699_10091263
424 Ga0207699_10152405
425 Ga0207684_10029697
426 Ga0207684_10055440
427 Ga0207695_10017136
428 Ga0207671_10024414
429 Ga0207671_10138350
430 Ga0207693_10007284
431 Ga0207693_10025470
432 Ga0207693_10029440
433 Ga0207693_10159256
434 Ga0207663_10018515
435 Ga0207646_10000019
436 Ga0207646_10000039
437 Ga0207646_10011164
438 Ga0207646_10128428
439 Ga0207646_10265697
440 Ga0207694_10006243
441 Ga0207687_10014151
442 Ga0207700_10070719
443 Ga0207690_10052535
444 Ga0207686_10025695
445 Ga0207704_10008446
446 Ga0207665_10041178
447 Ga0207665_10057440
448 Ga0207665_10092817
449 Ga0207665_10148185
450 Ga0207711_10029991
451 Ga0207711_10046519
452 Ga0207661_10047134
453 Ga0207661_10207772
454 Ga0207667_10197148
455 Ga0207667_10315985
456 Ga0207712_10186162
457 Ga0207658_10017671
458 Ga0207658_10103149
459 Ga0207703_10006301
460 Ga0207639_10096040
461 Ga0207641_10004399
462 Ga0207641_10027319
463 Ga0207641_10126809
464 Ga0207648_10017398
465 Ga0207676_10090238
466 Ga0207674_10023295
467 Ga0207675_100293047
468 Ga0209588_1000947
469 Ga0209588_1001762
470 Ga0209588_1002884
471 Ga0209588_1013700
472 Ga0209588_1015319
473 Ga0209588_1041354
474 Ga0265354_1000096
475 Ga0268266_10250593
476 Ga0268264_10008137
477 Ga0268264_10013862
478 Ga0268264_10134262
479 Ga0268264_10210936
480 Ga0265770_1002940
481 Ga0265760_10005966
482 Ga0265760_10018142
483 Ga0265325_10003416
484 Ga0265325_10005081
485 Ga0265325_10007585
486 Ga0265329_10001965
487 Ga0265340_10001389
488 Ga0265339_10011822
489 Ga0265331_10000172
490 Ga0265331_10004452
491 Ga0265331_10017822
492 Ga0265316_10003212
493 Ga0265316_10017959
494 Ga0265316_10118078
495 Ga0265313_10005239
496 Ga0265313_10050857
497 Ga0265313_10078869
498 Ga0265314_10080569
499 Ga0265342_10003067
500 Ga0316212_1003885
501 Ga0373953_0001044
502 Ga0373954_0000086
503 Ga0373956_0001970
504 Ga0373957_0023245
505 Ga0373946_0012754
506 Ga0373955_0003542
507 Ga0373935_0067294
508 Ga0373927_0000078
509 Ga0373933_0000773
510 Ga0373947_0001445
511 Ga0373937_0032133
512 Ga0373925_0000127
513 Ga0436365_0338536
514 Ga0451577_0074340
515 Ga0453683_0012204
516 Ga0453684_0022304
517 Ga0453684_0088778
518 Ga0451576_0026106
519 Ga0495592_0031503
520 Ga0495651_0003022
521 Ga0495651_0030688
522 Ga0495580_0066139
523 Ga0495580_0109966
524 Ga0495664_0012806
525 Ga0495608_0042975
526 Ga0495628_0000473
527 Ga0495628_0115145
528 Ga0495666_0020371
529 Ga0495652_0001122
530 Ga0495652_0069604
531 Ga0495586_0052535
532 Ga0495587_0001997
533 Ga0495587_0021408
534 Ga0495587_0040338
535 Ga0495645_0025797
536 Ga0495645_0030051
537 Ga0495645_0055056
538 Ga0495667_0010431
539 Ga0495667_0045294
540 Ga0495634_0072084
541 Ga0495635_0137832
542 Ga0495657_0011069
543 Ga0495657_0080239
544 Ga0495623_0045290
545 Ga0495669_0017707
546 Ga0495613_0162609
547 Ga0495600_0004337
548 Ga0495604_0010343
549 Ga0495604_0014378
550 Ga0495674_0034531
551 Ga0495674_0125507
552 Ga0495674_0177615
553 Ga0495680_0015583
554 Ga0495680_0039585
555 Ga0495675_0000181
556 Ga0495675_0028719
557 Ga0495675_0029657
558 Ga0495684_0009183
559 Ga0495684_0078351
560 Ga0495684_0116084
561 Ga0495593_0022814
562 Ga0495602_0000541
563 Ga0495602_0052837
564 Ga0495602_0233009
565 Ga0495614_0007944
566 Ga0495614_0055672
567 Ga0496101_0043126
568 Ga0496102_0013643
569 Ga0496104_0067411
570 Ga0496104_0074377
571 Ga0496106_0024421
572 Ga0496112_0041601
573 Ga0496114_0160777
574 Ga0496115_0011691
575 Ga0496115_0012346
576 Ga0496115_0031169
577 Ga0496115_0127629
578 Ga0496115_0135839
579 nmdc:mga05p37_93072_c1
580 Ga0495601_0004463

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07724

AAA_2

AAA domain (Cdc48 subfamily)

142

326

0.94

PF10431

ClpB_D2-small

C-terminal, D2-small domain, of ClpB protein

332

415

0.91

PF07728

AAA_5

AAA domain (dynein-related subfamily)

146

282

0.78

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

147

274

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
6emw-assembly1.cif.gz_A structure of s.aureus clpc in complex with meca 0.8589 245 319
6emw-assembly1.cif.gz_A structure of s.aureus clpc in complex with meca 0.7457 245 319
7sxo-assembly1.cif.gz_F yeast lon (pim1) with endogenous substrate 0.7269 13 186
7ngf-assembly1.cif.gz_A p2c-state of wild type human mitochondrial lonp1 protease with bound endogenous substrate protein and in presence of atp/adp mix 0.7214 12 186
7p0b-assembly1.cif.gz_F human mitochondrial lon protease without substrate 0.7138 12 187
ID Description Score Start End Superfamily
af_I1JXT1_844_941_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9424 245 342 1.10.8.60
af_P9WPC9_722_820_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9364 245 333 1.10.8.60
af_Q8IB03_978_1070_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9329 245 341 1.10.8.60
af_Q54EV3_774_876_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9244 245 339 1.10.8.60
af_P31539_775_875_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9243 245 332 1.10.8.60
ID Description Score Start End GO Terms
AF-A0A7C0W815-F1-model_v4 AAA family ATPase 0.9287 18 186 GO:0005524
GO:0005737
GO:0016887
GO:0034605
AF-A0A0U3A1G2-F1-model_v4 Chaperone_ClpB: ATP-dependent chaperone protein 0.9201 32 202 GO:0005524
GO:0005737
GO:0016887
GO:0034605
AF-A0A3D4JDJ2-F1-model_v4 NDP-hexose 4-ketoreductase 0.913 18 183 GO:0005524
GO:0005737
GO:0016887
GO:0034605
AF-X1UKV3-F1-model_v4 AAA+ ATPase domain-containing protein 0.9122 16 190 GO:0005524
GO:0005737
GO:0016887
GO:0034605
AF-A0A0U3A1G2-F1-model_v4 Chaperone_ClpB: ATP-dependent chaperone protein 0.9098 32 202 GO:0005524
GO:0005737
GO:0016887
GO:0034605

Map