F401133

General Info

Members Datasets Scaffolds Average Seq Length
311 222 279 1066

Family's Representative Sequence

Representative Sequence 3300005985|Ga0081539_10001514|Ga0081539_1000151439
Length 1154
Sequence MRETCCVVCEQGDEKAGLMSIQSLLIANRGEIAIRIMRAAAELGMRTVAMFSEDDAQSLHTRKADETRPLRSKGVAAYLDIDAIIALAKEASCDAIHPGYGFLSENARFARRCVEAGLTFVGPRDEILDLFGDKVQARALAERCGVPVQKGTSTATTLEEARNFFISLGAGGAMMIKAVAGXXGRGMRTVYRLEDVEEAYTRSRSEAQQAFGNGQVYVEQLIPRARHIEVQILGDGSGAITHLGERECSMQRRHQKIVEVAPSPGLPSGLRARLTAAAMQMAKTVRYNNLGTFEFLVDANHMCDDSPFAFIETNARLQVEHTVTEEVTGIDLVQVQLQLAGGRSLADLHLQQAEAPTPRGCALQVRINMETMNSDGSVRPTGGTLSAFEPPSGPGVRVDSFGYVGYRTSPSFDSLLAKLICHSKSADFGDVVKKTYRALCEFKIEGVATNIPFLQSLLQHRDFLTQQIYTRFIDEHSAELSEVNRAAHQRLFFEPAPSAVRAGVKLNTIDPLAVLTHGKSEGASEVTQSTATVIAAPVTADLVGPDNTCPVPAPIQGTIVSIEICDGDAVRKGQQLLVMEAMKMEHVIHADCNGIVREVAVTVGDTIYEGHPLAFIEEAEVAVDAAEEIKQVDLDFVRPDLAEVYQRHAFTLDAQRPDAVERRRKTRQRTARENIDDLCDPGTYVEYGSLVIAAQRSRRTLDDLMKRTPADGMIAGIGRVNGQLFDEHRASCVLMSYDYTVLAGTQGFKNHMKKDRLFELAERLRLPVVFFTEGGGGRPGDTDWISPAGLDVMAFHYWGRLSGLVPLVGINSGRCFAGNAAILGCCDVVIATVNSNIGMGGPAMIEGGGLGVFRPEEVGPMSEQVPNGVVDIAVADEAEAVRVAKQYLSYFQGPFSNWQCADQRLLRSLIPENRLRIYDVRKVIETLADTNSVLEIRRHFGLGMVTAFIRIEGRPLGVIANNPSHLAGAIDSDGADKAARFMQLCDAFDIPLLLLCDTPGMMVGPEVEKTALVRHCCRLFVTGANLTVPFFTMVLRKGYGLGAQGMAGGSFKAPIFTVAWPTGEFGGMGLEGAVKLGFRKELEALEDPAERKALFDKMVSRAYEHGKGINIASHFEIDDVIDPMESRRLIMGALRAAPPPLPREGKKRPCVDTW

Samples

Sample ID Description Type Environment
1 2554235341 Pseudomonas protegens CHA0 Isolate Rhizosphere
2 2599185160 Pseudomonas sp. NFPP25 Isolate Rhizoplane
3 2599185161 Pseudomonas sp. NFPP09 Isolate Rhizoplane
4 2599185162 Pseudomonas sp. NFPP10 Isolate Rhizoplane
5 2599185163 Pseudomonas sp. NFPP12 Isolate Rhizoplane
6 2599185164 Pseudomonas sp. NFPP13 Isolate Rhizoplane
7 2599185165 Pseudomonas sp. NFPP18 Isolate Rhizoplane
8 2599185166 Pseudomonas sp. NFPP08 Isolate Rhizoplane
9 2599185168 Pseudomonas sp. NFPP05 Isolate Rhizoplane
10 2599185181 Pseudomonas sp. NFPP17 Isolate Rhizoplane
11 2599185182 Pseudomonas sp. NFPP19 Isolate Rhizoplane
12 2599185186 Pseudomonas sp. NFPP15 Isolate Rhizoplane
13 2599185356 Pseudomonas sp. NFPP14 Isolate Rhizoplane
14 2600254954 Pseudomonas sp. NFACC19-2 Isolate Rhizoplane
15 2600255313 Pseudomonas sp. NFPP16 Isolate Rhizoplane
16 2600255389 Pseudomonas sp. NFPP33 Isolate Rhizoplane
17 2667528171 Pseudomonas sp. NFPP22 Isolate Rhizoplane
18 2808606373 Pseudomonas sp. SLBN-2 Isolate Unclassified
19 2808606379 Pseudomonas sp. SJZ079 Isolate Rhizosphere
20 2818991464 Pseudomonas protegens 3295 Isolate Rhizosphere
21 2823421272 Pseudomonas mendocina S5.2 Isolate Rhizoplane
22 2857357740 Paraburkholderia tropica BE15 Isolate Rhizosphere
23 2904449895 Variovorax sp. 1763 Isolate Rhizosphere
24 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
25 2917070673 Pseudomonas protegens CHA0 Isolate Rhizosphere
26 2919501602 Pseudomonas alcaliphila 3512 Isolate Unclassified
27 2926063275 Pseudomonas sp. 3400 Isolate Unclassified
28 2928115317 Pseudacidovorax sp. 1753 Isolate Rhizosphere
29 2935353572 Pseudomonas protegens TECH19 Isolate Unclassified
30 3007395558 Pseudomonas chlororaphis PCL1601 Isolate Rhizosphere
31 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
32 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
33 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
34 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
35 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
36 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
37 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
38 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
39 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
40 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
41 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
42 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
43 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
44 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
45 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
46 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
47 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
48 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
49 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
50 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
51 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
52 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
53 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
54 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
55 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
56 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
57 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
58 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
59 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
60 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
61 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
62 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
63 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
64 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
65 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
66 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
67 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
68 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
69 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
70 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
71 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
72 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
73 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
74 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
75 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
76 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
77 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
78 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
79 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
80 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
81 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
82 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
83 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
84 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
85 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
86 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
87 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
88 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
89 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
90 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
91 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
92 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
93 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
94 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
95 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
96 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
97 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
98 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
99 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
100 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
101 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
102 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
103 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
104 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
105 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
106 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
107 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
108 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
109 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
110 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
111 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
112 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
113 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
114 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
115 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
116 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
117 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
118 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
119 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
120 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
140 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
141 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
142 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
144 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
145 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
146 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
147 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
148 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
149 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
150 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
151 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
152 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
153 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
154 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
155 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
156 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
157 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
158 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
159 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
160 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
161 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
162 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
163 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
164 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
165 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
166 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
167 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
168 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
169 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
170 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
171 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
172 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
173 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
174 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
175 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
176 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
177 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
178 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
179 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
180 3300042139 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0727L_E14_072516_1442 Metagenome Rhizosphere
181 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
182 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
183 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
184 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
185 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
186 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
187 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
188 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
189 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
190 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
191 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
192 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
193 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
194 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
195 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
196 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
197 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
198 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
199 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
200 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
201 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
202 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
203 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
204 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
205 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
206 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
207 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
208 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
209 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
210 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
211 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
212 3300053110 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 endosphere Metagenome Endosphere
213 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
214 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
215 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
216 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
217 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
218 3300053733 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 endosphere Metagenome Endosphere
219 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
220 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
221 637000220 Pseudomonas protegens Pf-5 Isolate Rhizoplane
222 8034962539 Pseudomonas sediminis PI11 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.42
Metatranscriptomes 1.29
Isolates 10.29

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 21.22
Nodule 0
Rhizoplane 5.79
Rhizosphere 67.85
Stem 0
Stem Tuber 0
Unclassified 5.14

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25162J39368_1000004 3300002737 Bacteria 441040
2 JGI25163J39215_1000045 3300002771 Bacteria 54643
3 JGI25164J39214_1000031 3300002772 Bacteria 144582
4 JGI25150J39212_1003761 3300002774 Bacteria 3497
5 JGI25151J46595_10000820 3300003187 Bacteria 24745
6 JGI25151J46595_10002368 3300003187 Bacteria 11442
7 JGI25165J46597_1000011 3300003214 Bacteria 441040
8 Ga0006562J51391_1028056 3300003578 Bacteria 7440
9 Ga0006562J51391_1028058 3300003578 Bacteria 6430
10 Ga0055535_1001172 3300003761 Bacteria 15183
11 Ga0055542_1000058 3300003762 Bacteria 162781
12 Ga0055537_1000117 3300003773 Bacteria 60144
13 Ga0055536_1003288 3300003781 Bacteria 8743
14 Ga0055530_10000248 3300003791 Bacteria 48834
15 Ga0055540_1003387 3300003792 Bacteria 7726
16 Ga0065165_1002218 3300005262 Bacteria 17339
17 Ga0070670_100000050 3300005331 Bacteria 132470
18 Ga0070689_100001169 3300005340 Bacteria 16594
19 Ga0070661_100016883 3300005344 Bacteria 5167
20 Ga0070668_100001178 3300005347 Bacteria 18504
21 Ga0070668_100014720 3300005347 Bacteria 5846
22 Ga0070668_100018768 3300005347 Bacteria 5194
23 Ga0070675_100000284 3300005354 Bacteria 33773
24 Ga0070667_100000299 3300005367 Bacteria 55531
25 Ga0070667_100008826 3300005367 Bacteria 8346
26 Ga0070667_100014195 3300005367 Bacteria 6580
27 Ga0070713_100001984 3300005436 Bacteria 13209
28 Ga0070705_100008610 3300005440 Bacteria 5054
29 Ga0070694_100008698 3300005444 Bacteria 6217
30 Ga0070708_100014363 3300005445 Bacteria 6513
31 Ga0070698_100001972 3300005471 Bacteria 22817
32 Ga0070698_100018999 3300005471 Bacteria 7228
33 Ga0070699_100003702 3300005518 Bacteria 13521
34 Ga0070684_100000563 3300005535 Bacteria 25535
35 Ga0068853_100005395 3300005539 Bacteria 10013
36 Ga0070686_100010011 3300005544 Bacteria 5337
37 Ga0070696_100007913 3300005546 Bacteria 7097
38 Ga0070665_100003570 3300005548 Bacteria 16490
39 Ga0070665_100009771 3300005548 Bacteria 9702
40 Ga0068855_100000010 3300005563 Bacteria 246022
41 Ga0068855_100077624 3300005563 Bacteria 3854
42 Ga0070664_100001261 3300005564 Bacteria 20270
43 Ga0070664_100003990 3300005564 Bacteria 11867
44 Ga0068859_100020527 3300005617 Bacteria 6629
45 Ga0068859_100071228 3300005617 Bacteria 3512
46 Ga0068864_100000238 3300005618 Bacteria 49284
47 Ga0068864_100001579 3300005618 Bacteria 18751
48 Ga0068861_100001171 3300005719 Bacteria 16336
49 Ga0068861_100039023 3300005719 Bacteria 3542
50 Ga0068863_100000542 3300005841 Bacteria 38493
51 Ga0068863_100002323 3300005841 Bacteria 18907
52 Ga0068858_100002587 3300005842 Bacteria 18223
53 Ga0068860_100000015 3300005843 Bacteria 313639
54 Ga0068860_100000083 3300005843 Bacteria 168189
55 Ga0068860_100003590 3300005843 Bacteria 15950
56 Ga0068860_100009458 3300005843 Bacteria 9677
57 Ga0068860_100041795 3300005843 Bacteria 4380
58 Ga0068862_100000786 3300005844 Bacteria 31460
59 Ga0068862_100002342 3300005844 Bacteria 16872
60 Ga0068862_100008455 3300005844 Bacteria 8514
61 Ga0068862_100043362 3300005844 Bacteria 3835
62 Ga0068862_100048452 3300005844 Bacteria 3627
63 Ga0081455_10000723 3300005937 Bacteria 42827
64 Ga0081455_10014643 3300005937 Bacteria 7670
65 Ga0081455_10021281 3300005937 Bacteria 6086
66 Ga0081539_10000298 3300005985 Bacteria 111938
67 Ga0081539_10001514 3300005985 Bacteria 39031
68 Ga0081539_10014091 3300005985 Bacteria 5947
69 Ga0075365_10002892 3300006038 Bacteria 8652
70 Ga0075370_10000829 3300006353 Bacteria 12472
71 Ga0075370_10002731 3300006353 Bacteria 8265
72 Ga0075428_100010502 3300006844 Bacteria 10288
73 Ga0075428_100012802 3300006844 Bacteria 9329
74 Ga0075428_100022483 3300006844 Bacteria 6982
75 Ga0075430_100016842 3300006846 Bacteria 6226
76 Ga0075431_100000706 3300006847 Bacteria 28808
77 Ga0075429_100001032 3300006880 Bacteria 22269
78 Ga0075429_100001864 3300006880 Bacteria 17453
79 Ga0075429_100027071 3300006880 Bacteria 4977
80 Ga0097620_100020526 3300006931 Bacteria 6629
81 Ga0097620_100071227 3300006931 Bacteria 3512
82 Ga0105244_10002395 3300009036 Bacteria 14172
83 Ga0105240_10000189 3300009093 Bacteria 125396
84 Ga0105240_10091795 3300009093 Bacteria 3709
85 Ga0111539_10000809 3300009094 Bacteria 40598
86 Ga0114129_10002727 3300009147 Bacteria 24623
87 Ga0114129_10016531 3300009147 Bacteria 10505
88 Ga0105243_10008531 3300009148 Bacteria 7862
89 Ga0105243_10009541 3300009148 Bacteria 7390
90 Ga0105248_10005759 3300009177 Bacteria 13611
91 Ga0105248_10024241 3300009177 Bacteria 6746
92 Ga0105238_10009127 3300009551 Bacteria 9926
93 Ga0105249_10000356 3300009553 Bacteria 45856
94 Ga0105249_10011894 3300009553 Bacteria 7654
95 Ga0157373_10002451 3300013100 Bacteria 14129
96 Ga0157371_10000057 3300013102 Bacteria 171900
97 Ga0157370_10004988 3300013104 Bacteria 15015
98 Ga0163163_10003607 3300014325 Bacteria 13150
99 Ga0182008_10000224 3300014497 Bacteria 44336
100 Ga0182008_10001260 3300014497 Bacteria 17398
101 Ga0182008_10001387 3300014497 Bacteria 16403
102 Ga0182008_10012492 3300014497 Bacteria 4482
103 Ga0157377_10001664 3300014745 Bacteria 9683
104 Ga0157379_10000188 3300014968 Bacteria 47371
105 Ga0182006_1001563 3300015261 Bacteria 13680
106 Ga0182007_10000505 3300015262 Bacteria 23096
107 Ga0163161_10000268 3300017792 Bacteria 45830
108 Ga0206354_10493269 3300020081 Bacteria 6223
109 Ga0213876_10000802 3300021384 Bacteria 21295
110 Ga0209760_100032 3300025207 Bacteria 138015
111 Ga0207427_100003 3300025231 Bacteria 1035004
112 Ga0209437_100002 3300025233 Bacteria 1574801
113 Ga0209258_100147 3300025242 Bacteria 162823
114 Ga0209148_1000122 3300025254 Bacteria 186071
115 Ga0209129_1001609 3300025258 Bacteria 12307
116 Ga0209129_1002397 3300025258 Bacteria 9226
117 Ga0209233_1000004 3300025261 Bacteria 1574798
118 Ga0209565_1000248 3300025263 Bacteria 57592
119 Ga0209673_1000681 3300025273 Bacteria 48925
120 Ga0209673_1000686 3300025273 Bacteria 48575
121 Ga0209673_1002373 3300025273 Bacteria 13228
122 Ga0209130_1000614 3300025284 Bacteria 34072
123 Ga0209675_1002502 3300025291 Bacteria 9403
124 Ga0209676_1000202 3300025292 Bacteria 133078
125 Ga0209676_1000623 3300025292 Bacteria 51464
126 Ga0209676_1007052 3300025292 Bacteria 5389
127 Ga0209025_1000145 3300025294 Bacteria 181436
128 Ga0209025_1000285 3300025294 Bacteria 114575
129 Ga0209025_1001205 3300025294 Bacteria 36303
130 Ga0209564_1000754 3300025295 Bacteria 45879
131 Ga0209564_1000950 3300025295 Bacteria 37095
132 Ga0209758_1000142 3300025297 Bacteria 171779
133 Ga0209050_1000632 3300025298 Bacteria 54658
134 Ga0209256_1000114 3300025299 Bacteria 173999
135 Ga0209256_1000626 3300025299 Bacteria 48575
136 Ga0207426_1000162 3300025302 Bacteria 172643
137 Ga0207426_1000832 3300025302 Bacteria 32765
138 Ga0207426_1001165 3300025302 Bacteria 23537
139 Ga0209051_1000565 3300025303 Bacteria 44938
140 Ga0209051_1000589 3300025303 Bacteria 42906
141 Ga0209051_1000899 3300025303 Bacteria 29695
142 Ga0209257_1000163 3300025304 Bacteria 175355
143 Ga0209257_1001615 3300025304 Bacteria 25834
144 Ga0209257_1004989 3300025304 Bacteria 9686
145 Ga0207655_1005511 3300025728 Bacteria 8585
146 Ga0207643_10003640 3300025908 Bacteria 8303
147 Ga0207705_10005789 3300025909 Bacteria 9206
148 Ga0207684_10013014 3300025910 Bacteria 7203
149 Ga0207707_10008877 3300025912 Bacteria 8728
150 Ga0207695_10000003 3300025913 Bacteria 1368691
151 Ga0207695_10013780 3300025913 Bacteria 9620
152 Ga0207662_10001172 3300025918 Bacteria 12450
153 Ga0207649_10006696 3300025920 Bacteria 6260
154 Ga0207646_10001049 3300025922 Bacteria 35169
155 Ga0207694_10000011 3300025924 Bacteria 417640
156 Ga0207650_10000133 3300025925 Bacteria 90953
157 Ga0207664_10008708 3300025929 Bacteria 7094
158 Ga0207709_10000180 3300025935 Bacteria 84481
159 Ga0207709_10000752 3300025935 Bacteria 25630
160 Ga0207709_10004609 3300025935 Bacteria 7930
161 Ga0207670_10009807 3300025936 Bacteria 5483
162 Ga0207704_10005829 3300025938 Bacteria 5700
163 Ga0207711_10047932 3300025941 Bacteria 3655
164 Ga0207689_10005671 3300025942 Bacteria 11109
165 Ga0207667_10000093 3300025949 Bacteria 145814
166 Ga0207667_10045120 3300025949 Bacteria 4669
167 Ga0207668_10000662 3300025972 Bacteria 21158
168 Ga0207668_10001535 3300025972 Bacteria 13503
169 Ga0207668_10018482 3300025972 Bacteria 4388
170 Ga0207658_10000931 3300025986 Bacteria 24185
171 Ga0207641_10003109 3300026088 Bacteria 14930
172 Ga0207641_10034099 3300026088 Bacteria 4232
173 Ga0207641_10037308 3300026088 Bacteria 4058
174 Ga0207648_10005235 3300026089 Bacteria 13113
175 Ga0207676_10000109 3300026095 Bacteria 74080
176 Ga0207676_10002960 3300026095 Bacteria 12113
177 Ga0207674_10046885 3300026116 Bacteria 4434
178 Ga0207675_100006798 3300026118 Bacteria 10827
179 Ga0207675_100039274 3300026118 Bacteria 4418
180 Ga0207428_10011653 3300027907 Bacteria 7758
181 Ga0268266_10003941 3300028379 Bacteria 14428
182 Ga0268266_10013244 3300028379 Bacteria 7109
183 Ga0268265_10006583 3300028380 Bacteria 7863
184 Ga0268265_10011051 3300028380 Bacteria 6098
185 Ga0268265_10033188 3300028380 Bacteria 3750
186 Ga0268264_10000002 3300028381 Bacteria 1153045
187 Ga0268264_10000014 3300028381 Bacteria 509962
188 Ga0268264_10000055 3300028381 Bacteria 314947
189 Ga0268264_10000364 3300028381 Bacteria 67218
190 Ga0265338_10031662 3300028800 Bacteria 5181
191 Ga0316177_1032144 3300030731 Bacteria 5320
192 Ga0265760_10000840 3300031090 Bacteria 8835
193 Ga0265330_10007803 3300031235 Bacteria 5194
194 Ga0265332_10000053 3300031238 Bacteria 108878
195 Ga0265320_10007812 3300031240 Bacteria 6606
196 Ga0265339_10001856 3300031249 Bacteria 15534
197 Ga0265331_10000130 3300031250 Bacteria 99140
198 Ga0265327_10000170 3300031251 Bacteria 140044
199 Ga0265327_10000560 3300031251 Bacteria 63550
200 Ga0265316_10000085 3300031344 Bacteria 99136
201 Ga0307509_10006266 3300031507 Bacteria 16079
202 Ga0307408_100000013 3300031548 Bacteria 386212
203 Ga0307408_100000654 3300031548 Bacteria 29073
204 Ga0307408_100004047 3300031548 Bacteria 9998
205 Ga0307508_10000213 3300031616 Bacteria 70156
206 Ga0265314_10000540 3300031711 Bacteria 48694
207 Ga0265314_10002447 3300031711 Bacteria 18995
208 Ga0265342_10002166 3300031712 Bacteria 17300
209 Ga0265342_10009715 3300031712 Bacteria 6742
210 Ga0307516_10006903 3300031730 Bacteria 13212
211 Ga0307405_10008716 3300031731 Bacteria 5155
212 Ga0307406_10000210 3300031901 Bacteria 35137
213 Ga0307406_10000328 3300031901 Bacteria 27552
214 Ga0307416_100004738 3300032002 Bacteria 8253
215 Ga0373954_0001695 3300035118 Bacteria 9040
216 Ga0373935_0005316 3300035692 Bacteria 7583
217 Ga0373937_0007737 3300036401 Bacteria 9315
218 Ga0373937_0008080 3300036401 Bacteria 9131
219 Ga0395899_0007691 3300037312 Bacteria 8308
220 Ga0395899_0027716 3300037312 Bacteria 4268
221 Ga0395900_0005743 3300037418 Bacteria 12970
222 Ga0395900_0009704 3300037418 Bacteria 9864
223 Ga0395905_0000269 3300037471 Bacteria 77631
224 Ga0436365_0173869 3300039437 Bacteria 89108
225 Ga0436360_1267464 3300039438 Bacteria 3636
226 Ga0436362_0504090 3300039453 Bacteria 4137
227 Ga0439449_0001653 3300042007 Bacteria 8759
228 Ga0439456_001961 3300042013 Bacteria 4143
229 Ga0450911_000022 3300042115 Bacteria 91239
230 Ga0450904_000473 3300042139 Bacteria 7903
231 Ga0439446_0000071 3300042156 Bacteria 16740
232 Ga0439446_0001139 3300042156 Bacteria 5894
233 Ga0495627_002512 3300046453 Bacteria 8750
234 Ga0495651_0033271 3300046462 Bacteria 4022
235 Ga0495580_0001641 3300046472 Bacteria 19688
236 Ga0495580_0022703 3300046472 Bacteria 4613
237 Ga0495654_0006482 3300046530 Bacteria 6646
238 Ga0495667_0017769 3300046559 Bacteria 4804
239 Ga0495684_0015910 3300047471 Bacteria 5793
240 Ga0496116_0000038 3300048919 Bacteria 370217
241 Ga0496121_0001478 3300048924 Bacteria 39564
242 Ga0496123_0001109 3300048926 Bacteria 40387
243 Ga0496124_0036665 3300048927 Bacteria 4274
244 Ga0496125_0008801 3300048928 Bacteria 10498
245 Ga0495682_0005901 3300049460 Bacteria 5026
246 Ga0501034_0003920 3300049571 Bacteria 16712
247 Ga0501041_0018313 3300049577 Bacteria 4172
248 Ga0501072_0017206 3300049588 Bacteria 5556
249 Ga0501075_0012699 3300049591 Bacteria 5992
250 Ga0501083_0001392 3300049744 Bacteria 16438
251 Ga0501083_0003216 3300049744 Bacteria 11380
252 Ga0501226_000004 3300049853 Bacteria 284656
253 nmdc:mga03683_2883_c1 3300050489 Bacteria 5425
254 nmdc:mga0k408_3148_c1 3300050493 Bacteria 8746
255 nmdc:mga07m45_564_c1 3300050496 Bacteria 15739
256 nmdc:mga05p37_4668_c1 3300050507 Bacteria 16013
257 nmdc:mga09592_718_c1 3300050508 Bacteria 25442
258 nmdc:mga09592_872_c1 3300050508 Bacteria 23611
259 nmdc:mga0qj67_9222_c1 3300050509 Bacteria 7331
260 nmdc:mga06r32_321_c1 3300050510 Bacteria 40092
261 nmdc:mga06r32_337_c1 3300050510 Bacteria 39051
262 nmdc:mga08y16_20890_c1 3300050511 Bacteria 6914
263 nmdc:mga08y16_223_c1 3300050511 Bacteria 50740
264 nmdc:mga08y16_70771_c1 3300050511 Bacteria 3635
265 nmdc:mga0n895_22529_c1 3300050512 Bacteria 5908
266 Ga0500610_0000802 3300053079 Bacteria 9952
267 Ga0500651_0000217 3300053093 Bacteria 36081
268 Ga0500641_0001797 3300053096 Bacteria 7602
269 Ga0500571_002462 3300053110 Bacteria 9201
270 Ga0500593_001027 3300053117 Bacteria 10144
271 Ga0500607_004098 3300053121 Bacteria 10200
272 Ga0500658_0000146 3300053134 Bacteria 33700
273 Ga0500658_0000151 3300053134 Bacteria 33213
274 Ga0500616_0011715 3300053153 Bacteria 5162
275 Ga0500627_0000020 3300053158 Bacteria 109977
276 Ga0500552_000076 3300053733 Bacteria 8018
277 Ga0501082_0018340 3300060353 Bacteria 6027
278 Ga0501082_0027780 3300060353 Bacteria 4872
279 Ga0530510_0010401 3300061734 Bacteria 6522

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300042013 Ga0439456_001961 Ga0439456_001961_13_2778 881
2 3300050511 nmdc:mga08y16_70771_c1 nmdc:mga08y16_70771_c1_614_3625 897
3 3300009093 Ga0105240_10091795 Ga0105240_100917951 914
4 3300046462 Ga0495651_0033271 Ga0495651_0033271_1110_4004 925
5 3300039453 Ga0436362_0504090 Ga0436362_0504090_1052_4120 962
6 3300049591 Ga0501075_0012699 Ga0501075_0012699_844_4107 987
7 3300049577 Ga0501041_0018313 Ga0501041_0018313_497_3760 988
8 3300020081 Ga0206354_10493269 Ga0206354_104932693 991
9 3300025909 Ga0207705_10005789 Ga0207705_100057899 991
10 3300025912 Ga0207707_10008877 Ga0207707_100088777 991
11 3300028380 Ga0268265_10011051 Ga0268265_100110513 993
12 3300005843 Ga0068860_100000083 Ga0068860_10000008356 994
13 3300028381 Ga0268264_10000055 Ga0268264_10000055190 994
14 3300005548 Ga0070665_100009771 Ga0070665_1000097713 995
15 3300031251 Ga0265327_10000560 Ga0265327_1000056012 997
16 3300005844 Ga0068862_100043362 Ga0068862_1000433621 1000
17 3300028380 Ga0268265_10033188 Ga0268265_100331881 1000
18 3300037418 Ga0395900_0009704 Ga0395900_0009704_3660_6911 1000
19 3300035692 Ga0373935_0005316 Ga0373935_0005316_152_3544 1002
20 3300046472 Ga0495580_0022703 Ga0495580_0022703_1172_4564 1002
21 3300014968 Ga0157379_10000188 Ga0157379_1000018834 1003
22 3300005436 Ga0070713_100001984 Ga0070713_1000019843 1004
23 3300005844 Ga0068862_100048452 Ga0068862_1000484521 1004
24 3300025929 Ga0207664_10008708 Ga0207664_100087084 1004
25 3300031548 Ga0307408_100000654 Ga0307408_1000006547 1004
26 3300031901 Ga0307406_10000328 Ga0307406_100003285 1004
27 3300005347 Ga0070668_100014720 Ga0070668_1000147202 1005
28 3300005617 Ga0068859_100020527 Ga0068859_1000205274 1005
29 3300005719 Ga0068861_100039023 Ga0068861_1000390232 1005
30 3300005843 Ga0068860_100009458 Ga0068860_1000094586 1005
31 3300006931 Ga0097620_100020526 Ga0097620_1000205264 1005
32 3300025972 Ga0207668_10018482 Ga0207668_100184822 1005
33 3300037418 Ga0395900_0005743 Ga0395900_0005743_1657_4974 1007
34 3300002774 JGI25150J39212_1003761 JGI25150J39212_10037612 1008
35 3300025258 Ga0209129_1001609 Ga0209129_10016094 1008
36 3300025284 Ga0209130_1000614 Ga0209130_100061427 1008
37 3300025294 Ga0209025_1001205 Ga0209025_100120529 1008
38 3300025295 Ga0209564_1000950 Ga0209564_100095010 1008
39 3300025297 Ga0209758_1000142 Ga0209758_100014230 1008
40 3300025299 Ga0209256_1000114 Ga0209256_100011430 1008
41 3300025302 Ga0207426_1000162 Ga0207426_100016229 1008
42 3300025304 Ga0209257_1004989 Ga0209257_10049895 1008
43 3300005262 Ga0065165_1002218 Ga0065165_10022188 1009
44 3300025292 Ga0209676_1007052 Ga0209676_10070523 1009
45 3300025302 Ga0207426_1000832 Ga0207426_100083228 1009
46 3300031730 Ga0307516_10006903 Ga0307516_100069038 1009
47 3300005843 Ga0068860_100000015 Ga0068860_100000015214 1010
48 3300014497 Ga0182008_10001260 Ga0182008_100012602 1010
49 3300028381 Ga0268264_10000002 Ga0268264_10000002894 1010
50 3300028381 Ga0268264_10000014 Ga0268264_10000014217 1010
51 3300047471 Ga0495684_0015910 Ga0495684_0015910_2553_5702 1010
52 3300049571 Ga0501034_0003920 Ga0501034_0003920_7411_10725 1010
53 3300050512 nmdc:mga0n895_22529_c1 nmdc:mga0n895_22529_c1_1511_4840 1013
54 3300028800 Ga0265338_10031662 Ga0265338_100316622 1015
55 3300037312 Ga0395899_0027716 Ga0395899_0027716_236_3580 1015
56 3300053093 Ga0500651_0000217 Ga0500651_0000217_638_3934 1015
57 3300053134 Ga0500658_0000151 Ga0500658_0000151_4185_7481 1015
58 3300005518 Ga0070699_100003702 Ga0070699_1000037022 1016
59 3300025910 Ga0207684_10013014 Ga0207684_100130142 1016
60 3300025922 Ga0207646_10001049 Ga0207646_1000104918 1016
61 3300061734 Ga0530510_0010401 Ga0530510_0010401_2503_5862 1017
62 3300049460 Ga0495682_0005901 Ga0495682_0005901_705_3989 1018
63 3300005563 Ga0068855_100000010 Ga0068855_10000001061 1019
64 3300009093 Ga0105240_10000189 Ga0105240_100001894 1019
65 3300009551 Ga0105238_10009127 Ga0105238_100091276 1019
66 3300025913 Ga0207695_10000003 Ga0207695_10000003432 1019
67 3300025924 Ga0207694_10000011 Ga0207694_10000011325 1019
68 3300025949 Ga0207667_10000093 Ga0207667_1000009349 1019
69 3300053110 Ga0500571_002462 Ga0500571_002462_2091_5387 1020
70 3300005985 Ga0081539_10014091 Ga0081539_100140912 1022
71 3300049588 Ga0501072_0017206 Ga0501072_0017206_276_3572 1023
72 3300049744 Ga0501083_0003216 Ga0501083_0003216_5485_8781 1023
73 3300053121 Ga0500607_004098 Ga0500607_004098_2889_6182 1023
74 3300060353 Ga0501082_0018340 Ga0501082_0018340_96_3542 1023
75 3300060353 Ga0501082_0027780 Ga0501082_0027780_1171_4467 1023
76 3300005347 Ga0070668_100018768 Ga0070668_1000187682 1025
77 3300005367 Ga0070667_100008826 Ga0070667_1000088268 1025
78 3300025972 Ga0207668_10001535 Ga0207668_100015359 1025
79 3300026118 Ga0207675_100039274 Ga0207675_1000392741 1025
80 3300031507 Ga0307509_10006266 Ga0307509_1000626610 1025
81 3300003187 JGI25151J46595_10002368 JGI25151J46595_100023685 1026
82 3300005937 Ga0081455_10000723 Ga0081455_1000072317 1026
83 3300025263 Ga0209565_1000248 Ga0209565_100024832 1026
84 3300025273 Ga0209673_1000681 Ga0209673_100068131 1026
85 3300025294 Ga0209025_1000145 Ga0209025_100014525 1026
86 3300005367 Ga0070667_100000299 Ga0070667_10000029954 1027
87 3300005843 Ga0068860_100003590 Ga0068860_10000359015 1027
88 3300005844 Ga0068862_100000786 Ga0068862_10000078631 1027
89 3300005985 Ga0081539_10000298 Ga0081539_1000029859 1027
90 3300009177 Ga0105248_10005759 Ga0105248_100057597 1027
91 3300009177 Ga0105248_10024241 Ga0105248_100242414 1027
92 3300009553 Ga0105249_10000356 Ga0105249_1000035644 1027
93 3300025986 Ga0207658_10000931 Ga0207658_100009314 1027
94 3300028379 Ga0268266_10013244 Ga0268266_100132442 1027
95 3300028380 Ga0268265_10006583 Ga0268265_100065836 1027
96 3300028381 Ga0268264_10000364 Ga0268264_100003645 1027
97 3300006844 Ga0075428_100010502 Ga0075428_1000105024 1028
98 3300006847 Ga0075431_100000706 Ga0075431_10000070615 1028
99 3300006880 Ga0075429_100001864 Ga0075429_1000018644 1028
100 3300009094 Ga0111539_10000809 Ga0111539_1000080921 1028
101 3300009147 Ga0114129_10016531 Ga0114129_100165314 1028
102 3300027907 Ga0207428_10011653 Ga0207428_100116534 1028
103 3300046530 Ga0495654_0006482 Ga0495654_0006482_2598_5894 1028
104 3300050507 nmdc:mga05p37_4668_c1 nmdc:mga05p37_4668_c1_9826_13191 1028
105 3300050508 nmdc:mga09592_718_c1 nmdc:mga09592_718_c1_17178_20543 1028
106 3300050510 nmdc:mga06r32_321_c1 nmdc:mga06r32_321_c1_24807_28172 1028
107 3300050511 nmdc:mga08y16_223_c1 nmdc:mga08y16_223_c1_8369_11734 1028
108 3300053134 Ga0500658_0000146 Ga0500658_0000146_4009_7305 1028
109 3300005539 Ga0068853_100005395 Ga0068853_1000053954 1029
110 3300005563 Ga0068855_100077624 Ga0068855_1000776242 1029
111 3300021384 Ga0213876_10000802 Ga0213876_100008023 1029
112 3300025949 Ga0207667_10045120 Ga0207667_100451201 1029
113 3300039437 Ga0436365_0173869 Ga0436365_0173869_76509_79751 1029
114 3300048928 Ga0496125_0008801 Ga0496125_0008801_2833_6132 1030
115 3300031249 Ga0265339_10001856 Ga0265339_100018563 1031
116 3300031711 Ga0265314_10002447 Ga0265314_1000244713 1031
117 3300031712 Ga0265342_10009715 Ga0265342_100097153 1031
118 3300036401 Ga0373937_0008080 Ga0373937_0008080_4174_7416 1033
119 3300046453 Ga0495627_002512 Ga0495627_002512_5103_8423 1033
120 3300046472 Ga0495580_0001641 Ga0495580_0001641_14266_17508 1033
121 3300046559 Ga0495667_0017769 Ga0495667_0017769_170_3412 1033
122 3300003761 Ga0055535_1001172 Ga0055535_10011725 1034
123 3300003762 Ga0055542_1000058 Ga0055542_100005827 1034
124 3300005445 Ga0070708_100014363 Ga0070708_1000143634 1034
125 3300025242 Ga0209258_100147 Ga0209258_100147128 1034
126 3300025254 Ga0209148_1000122 Ga0209148_100012227 1034
127 3300025913 Ga0207695_10013780 Ga0207695_100137803 1034
128 3300031235 Ga0265330_10007803 Ga0265330_100078033 1034
129 3300031238 Ga0265332_10000053 Ga0265332_1000005334 1034
130 3300031240 Ga0265320_10007812 Ga0265320_100078125 1034
131 3300031250 Ga0265331_10000130 Ga0265331_1000013046 1034
132 3300031344 Ga0265316_10000085 Ga0265316_1000008546 1034
133 3300031711 Ga0265314_10000540 Ga0265314_1000054012 1034
134 3300031712 Ga0265342_10002166 Ga0265342_1000216616 1034
135 3300053096 Ga0500641_0001797 Ga0500641_0001797_267_3647 1035
136 3300053158 Ga0500627_0000020 Ga0500627_0000020_92884_96162 1035
137 3300003792 Ga0055540_1003387 Ga0055540_10033872 1036
138 3300017792 Ga0163161_10000268 Ga0163161_100002687 1036
139 3300025303 Ga0209051_1000899 Ga0209051_100089921 1036
140 3300035118 Ga0373954_0001695 Ga0373954_0001695_1550_4963 1036
141 3300036401 Ga0373937_0007737 Ga0373937_0007737_5117_8530 1036
142 3300053079 Ga0500610_0000802 Ga0500610_0000802_4861_8154 1036
143 3300053117 Ga0500593_001027 Ga0500593_001027_4070_7363 1036
144 3300003578 Ga0006562J51391_1028056 Ga0006562J51391_10280564 1037
145 3300003578 Ga0006562J51391_1028058 Ga0006562J51391_10280584 1037
146 3300013100 Ga0157373_10002451 Ga0157373_1000245110 1037
147 3300014497 Ga0182008_10012492 Ga0182008_100124922 1037
148 3300031548 Ga0307408_100004047 Ga0307408_1000040472 1037
149 3300031901 Ga0307406_10000210 Ga0307406_100002105 1037
150 iso_pu_bacteria 2928115317 2928118459 1037
151 3300003187 JGI25151J46595_10000820 JGI25151J46595_100008207 1038
152 3300006353 Ga0075370_10000829 Ga0075370_100008294 1038
153 3300013104 Ga0157370_10004988 Ga0157370_100049884 1038
154 3300025294 Ga0209025_1000285 Ga0209025_100028582 1038
155 3300031090 Ga0265760_10000840 Ga0265760_100008406 1038
156 3300032002 Ga0307416_100004738 Ga0307416_1000047383 1038
157 3300039438 Ga0436360_1267464 Ga0436360_1267464_159_3455 1038
158 3300048927 Ga0496124_0036665 Ga0496124_0036665_300_3587 1038
159 3300050496 nmdc:mga07m45_564_c1 nmdc:mga07m45_564_c1_343_3639 1038
160 3300003781 Ga0055536_1003288 Ga0055536_10032885 1039
161 3300003791 Ga0055530_10000248 Ga0055530_1000024825 1039
162 3300006844 Ga0075428_100012802 Ga0075428_1000128024 1039
163 3300006880 Ga0075429_100001032 Ga0075429_10000103210 1039
164 3300009147 Ga0114129_10002727 Ga0114129_100027272 1039
165 3300025258 Ga0209129_1002397 Ga0209129_10023977 1039
166 3300025273 Ga0209673_1000686 Ga0209673_100068611 1039
167 3300025273 Ga0209673_1002373 Ga0209673_10023737 1039
168 3300025292 Ga0209676_1000202 Ga0209676_100020228 1039
169 3300025292 Ga0209676_1000623 Ga0209676_10006236 1039
170 3300025295 Ga0209564_1000754 Ga0209564_100075411 1039
171 3300025298 Ga0209050_1000632 Ga0209050_100063228 1039
172 3300025299 Ga0209256_1000626 Ga0209256_100062611 1039
173 3300025302 Ga0207426_1001165 Ga0207426_100116510 1039
174 3300025303 Ga0209051_1000565 Ga0209051_10005655 1039
175 3300025303 Ga0209051_1000589 Ga0209051_10005895 1039
176 3300025304 Ga0209257_1000163 Ga0209257_1000163147 1039
177 3300037471 Ga0395905_0000269 Ga0395905_0000269_46093_49377 1039
178 3300050508 nmdc:mga09592_872_c1 nmdc:mga09592_872_c1_2881_6228 1039
179 iso_pu_bacteria 2904449895 2904452892 1040
180 3300042139 Ga0450904_000473 Ga0450904_000473_3028_6288 1041
181 iso_pu_bacteria 2904541872 2904546441 1041
182 3300050493 nmdc:mga0k408_3148_c1 nmdc:mga0k408_3148_c1_4005_7334 1042
183 3300005548 Ga0070665_100003570 Ga0070665_10000357018 1043
184 3300005844 Ga0068862_100002342 Ga0068862_1000023425 1043
185 3300025291 Ga0209675_1002502 Ga0209675_10025026 1043
186 3300025304 Ga0209257_1001615 Ga0209257_10016154 1043
187 3300028379 Ga0268266_10003941 Ga0268266_1000394114 1043
188 3300030731 Ga0316177_1032144 Ga0316177_10321443 1043
189 3300031616 Ga0307508_10000213 Ga0307508_1000021345 1043
190 3300005340 Ga0070689_100001169 Ga0070689_1000011693 1044
191 3300005344 Ga0070661_100016883 Ga0070661_1000168832 1044
192 3300005354 Ga0070675_100000284 Ga0070675_10000028416 1044
193 3300005367 Ga0070667_100014195 Ga0070667_1000141954 1044
194 3300005440 Ga0070705_100008610 Ga0070705_1000086102 1044
195 3300005535 Ga0070684_100000563 Ga0070684_10000056323 1044
196 3300005544 Ga0070686_100010011 Ga0070686_1000100112 1044
197 3300005564 Ga0070664_100001261 Ga0070664_1000012612 1044
198 3300005564 Ga0070664_100003990 Ga0070664_1000039905 1044
199 3300005618 Ga0068864_100001579 Ga0068864_1000015793 1044
200 3300005719 Ga0068861_100001171 Ga0068861_1000011712 1044
201 3300005841 Ga0068863_100000542 Ga0068863_10000054222 1044
202 3300005842 Ga0068858_100002587 Ga0068858_1000025876 1044
203 3300005843 Ga0068860_100041795 Ga0068860_1000417952 1044
204 3300005844 Ga0068862_100008455 Ga0068862_1000084552 1044
205 3300009036 Ga0105244_10002395 Ga0105244_100023956 1044
206 3300009148 Ga0105243_10009541 Ga0105243_100095415 1044
207 3300014325 Ga0163163_10003607 Ga0163163_100036073 1044
208 3300014497 Ga0182008_10001387 Ga0182008_100013874 1044
209 3300014745 Ga0157377_10001664 Ga0157377_100016643 1044
210 3300015261 Ga0182006_1001563 Ga0182006_100156312 1044
211 3300015262 Ga0182007_10000505 Ga0182007_100005053 1044
212 3300025728 Ga0207655_1005511 Ga0207655_10055117 1044
213 3300025908 Ga0207643_10003640 Ga0207643_100036405 1044
214 3300025918 Ga0207662_10001172 Ga0207662_1000117210 1044
215 3300025920 Ga0207649_10006696 Ga0207649_100066963 1044
216 3300025935 Ga0207709_10000180 Ga0207709_1000018026 1044
217 3300025935 Ga0207709_10000752 Ga0207709_100007525 1044
218 3300025936 Ga0207670_10009807 Ga0207670_100098072 1044
219 3300025938 Ga0207704_10005829 Ga0207704_100058293 1044
220 3300025941 Ga0207711_10047932 Ga0207711_100479322 1044
221 3300025942 Ga0207689_10005671 Ga0207689_100056715 1044
222 3300026088 Ga0207641_10034099 Ga0207641_100340993 1044
223 3300026088 Ga0207641_10037308 Ga0207641_100373081 1044
224 3300026089 Ga0207648_10005235 Ga0207648_100052355 1044
225 3300026095 Ga0207676_10002960 Ga0207676_100029604 1044
226 3300006038 Ga0075365_10002892 Ga0075365_100028925 1045
227 3300006844 Ga0075428_100022483 Ga0075428_1000224835 1045
228 3300006880 Ga0075429_100027071 Ga0075429_1000270712 1045
229 3300031731 Ga0307405_10008716 Ga0307405_100087162 1045
230 3300042115 Ga0450911_000022 Ga0450911_000022_33552_36812 1045
231 3300042156 Ga0439446_0001139 Ga0439446_0001139_2135_5395 1045
232 3300049744 Ga0501083_0001392 Ga0501083_0001392_12739_16119 1045
233 3300050511 nmdc:mga08y16_20890_c1 nmdc:mga08y16_20890_c1_2777_6151 1045
234 3300005331 Ga0070670_100000050 Ga0070670_100000050131 1046
235 3300005347 Ga0070668_100001178 Ga0070668_1000011782 1046
236 3300005617 Ga0068859_100071228 Ga0068859_1000712281 1046
237 3300005618 Ga0068864_100000238 Ga0068864_1000002384 1046
238 3300005841 Ga0068863_100002323 Ga0068863_10000232319 1046
239 3300006846 Ga0075430_100016842 Ga0075430_1000168424 1046
240 3300006931 Ga0097620_100071227 Ga0097620_1000712271 1046
241 3300009553 Ga0105249_10011894 Ga0105249_100118943 1046
242 3300025925 Ga0207650_10000133 Ga0207650_1000013388 1046
243 3300025972 Ga0207668_10000662 Ga0207668_100006625 1046
244 3300026088 Ga0207641_10003109 Ga0207641_100031092 1046
245 3300026095 Ga0207676_10000109 Ga0207676_100001094 1046
246 3300026118 Ga0207675_100006798 Ga0207675_1000067983 1046
247 3300042007 Ga0439449_0001653 Ga0439449_0001653_3013_6309 1046
248 3300050509 nmdc:mga0qj67_9222_c1 nmdc:mga0qj67_9222_c1_997_4362 1046
249 3300050510 nmdc:mga06r32_337_c1 nmdc:mga06r32_337_c1_32394_35759 1046
250 3300003773 Ga0055537_1000117 Ga0055537_100011721 1047
251 3300006353 Ga0075370_10002731 Ga0075370_100027315 1047
252 3300026116 Ga0207674_10046885 Ga0207674_100468852 1047
253 3300005937 Ga0081455_10014643 Ga0081455_100146432 1048
254 3300005444 Ga0070694_100008698 Ga0070694_1000086983 1049
255 3300031251 Ga0265327_10000170 Ga0265327_1000017034 1049
256 3300053153 Ga0500616_0011715 Ga0500616_0011715_1307_4654 1049
257 3300037312 Ga0395899_0007691 Ga0395899_0007691_1774_5121 1050
258 3300005471 Ga0070698_100001972 Ga0070698_1000019729 1051
259 3300005937 Ga0081455_10021281 Ga0081455_100212812 1051
260 iso_pu_bacteria 2857357740 2857361329 1051
261 3300005471 Ga0070698_100018999 Ga0070698_1000189993 1053
262 3300050489 nmdc:mga03683_2883_c1 nmdc:mga03683_2883_c1_306_3668 1053
263 3300053733 Ga0500552_000076 Ga0500552_000076_3573_6944 1053
264 iso_pu_bacteria 2808606373 2808906537 1053
265 3300031548 Ga0307408_100000013 Ga0307408_100000013354 1054
266 3300049853 Ga0501226_000004 Ga0501226_000004_204436_207762 1054
267 iso_pu_bacteria 3007395558 3007400642 1054
268 3300005546 Ga0070696_100007913 Ga0070696_1000079134 1055
269 iso_pu_bacteria 2554235341 2555669999 1056
270 iso_pu_bacteria 2599185160 2599352964 1056
271 iso_pu_bacteria 2599185161 2599359313 1056
272 iso_pu_bacteria 2599185162 2599365166 1056
273 iso_pu_bacteria 2599185163 2599372007 1056
274 iso_pu_bacteria 2599185164 2599378072 1056
275 iso_pu_bacteria 2599185165 2599384551 1056
276 iso_pu_bacteria 2599185166 2599390865 1056
277 iso_pu_bacteria 2599185168 2599403050 1056
278 iso_pu_bacteria 2599185181 2599459798 1056
279 iso_pu_bacteria 2599185182 2599465859 1056
280 iso_pu_bacteria 2599185186 2599488819 1056
281 iso_pu_bacteria 2599185356 2600212405 1056
282 iso_pu_bacteria 2600254954 2600445283 1056
283 iso_pu_bacteria 2600255313 2601772573 1056
284 iso_pu_bacteria 2600255389 2602007820 1056
285 iso_pu_bacteria 2667528171 2671095455 1056
286 iso_pu_bacteria 2818991464 2819701068 1056
287 iso_pu_bacteria 2823421272 2823422039 1056
288 iso_pu_bacteria 2917070673 2917073822 1056
289 iso_pu_bacteria 2919501602 2919506328 1056
290 iso_pu_bacteria 2926063275 2926067398 1056
291 iso_pu_bacteria 2935353572 2935357120 1056
292 iso_pu_bacteria 637000220 637320368 1056
293 iso_pu_bacteria 8034962539 8034966895 1056
294 3300005985 Ga0081539_10001514 Ga0081539_1000151439 1057
295 3300042156 Ga0439446_0000071 Ga0439446_0000071_4144_7428 1057
296 iso_pu_bacteria 2808606379 2808941227 1057
297 3300009148 Ga0105243_10008531 Ga0105243_100085312 1058
298 3300013102 Ga0157371_10000057 Ga0157371_1000005718 1058
299 3300014497 Ga0182008_10000224 Ga0182008_1000022418 1058
300 3300025935 Ga0207709_10004609 Ga0207709_100046092 1058
301 3300048919 Ga0496116_0000038 Ga0496116_0000038_339851_343123 1058
302 3300048924 Ga0496121_0001478 Ga0496121_0001478_18801_22073 1058
303 3300048926 Ga0496123_0001109 Ga0496123_0001109_19412_22684 1058
304 3300002737 JGI25162J39368_1000004 JGI25162J39368_100000499 1060
305 3300002771 JGI25163J39215_1000045 JGI25163J39215_100004514 1060
306 3300002772 JGI25164J39214_1000031 JGI25164J39214_1000031100 1060
307 3300003214 JGI25165J46597_1000011 JGI25165J46597_100001199 1060
308 3300025207 Ga0209760_100032 Ga0209760_10003236 1060
309 3300025231 Ga0207427_100003 Ga0207427_100003100 1060
310 3300025233 Ga0209437_100002 Ga0209437_100002913 1060
311 3300025261 Ga0209233_1000004 Ga0209233_1000004512 1060

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00289

Biotin_carb_N

Biotin carboxylase, N-terminal domain

20

128

0.97

PF02785

Biotin_carb_C

Biotin carboxylase C-terminal domain

364

475

0.96

PF02786

CPSase_L_D2

Carbamoyl-phosphate synthase L chain, ATP binding domain

133

348

0.95

PF00364

Biotin_lipoyl

Biotin-requiring enzyme

549

616

0.92

PF03255

ACCA

Acetyl co-enzyme A carboxylase carboxyltransferase-like

944

1060

0.92

PF01039

Carboxyl_trans

Carboxyl transferase domain

662

1138

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
5fif-assembly1.cif.gz_E carboxyltransferase domain of a single-chain bacterial carboxylase 0.9693 542 1060
5fif-assembly1.cif.gz_E carboxyltransferase domain of a single-chain bacterial carboxylase 0.9674 542 1060
3va7-assembly1.cif.gz_A crystal structure of the kluyveromyces lactis urea carboxylase 0.9648 2 446
5i8i-assembly2.cif.gz_D crystal structure of the k. lactis urea amidolyase 0.9641 2 446
5fif-assembly1.cif.gz_F carboxyltransferase domain of a single-chain bacterial carboxylase 0.9633 539 1060
ID Description Score Start End Superfamily
af_A0A1D6J3D9_373_520_3.30.470.20 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.9759 201 321 3.30.470.20
5h80B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9741 4 129 3.40.50.20
5fifB02 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9684 807 1060 3.90.226.10
5fifB02 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9647 807 1060 3.90.226.10
5mlkB02 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.9595 199 448 3.30.470.20
ID Description Score Start End GO Terms
AF-A0A382WVU4-F1-model_v4 CoA carboxyltransferase C-terminal domain-containing protein 0.9869 754 1026 GO:0004658
AF-A0A7W1GXY3-F1-model_v4 Acetyl-CoA carboxylase biotin carboxylase subunit (EC 6.4.1.1) 0.9827 353 452 GO:0004736
GO:0005524
AF-A0A4Q5QFU1-F1-model_v4 biotin carboxylase (EC 6.3.4.14) 0.9801 335 446 GO:0003989
GO:0005524
AF-A0A4Q5VT65-F1-model_v4 deleted 0.9799 675 1060
AF-A0A382WVU4-F1-model_v4 CoA carboxyltransferase C-terminal domain-containing protein 0.9798 754 1026 GO:0004658

Feature Viewer

pLDDT pTM Quality
85.91 0.55 Medium
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Predicted Structure (AlphaFold2)

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