F400996

General Info

Members Datasets Scaffolds Average Seq Length
310 257 172 741

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8002285264|8002288601
Length 865
Sequence MLQSRFRVEGMDCAGCAKKIDTAARRVDGVDDVSVSVTAGTMTVTHQPATDLASLSKRIESLGYKVTPAAARSSAAALTGRAEAVSQDHSGHDHSGHDHAGHDHSGHEHSGHDHSKHDHSGHDHGDDAQDQIPGRDESLAQSRYRVEGMDCASCAQKIDTAVRRIEGIKEVSVSATAGTMTVTHGTDVDLSEIKKRVESLGYKVSPAAATRSKAAVGAASHEDHDHKDKKGVAGLHGHDHGNEEGPWWKSKKAKLTIVCGLALVAAFIVGKLVPAYETWAFIAAMAVGLIPIARRAMMAAVNGSPFTIETLMTVAAVGAVIIDASEEAAAVVFLFLVGELLEGVAAGRARASIKALATLVPKTALVEDGGKTTEVAAESLAVGSTILVRPGDRVPADGVILSGNTSIDEAPVTGESVPKAKGPEDQVFAGTINQDAAIRVKVTAAAADNTISRIIELVEQAQESKAPTERFIDRFSTYYTPGVMVVATLVAVVPPLAFGGDWSEWIYKGLAILLIGCPCALVISTPAAIAASLSAGARRGLLMKGGAVLESFRKVTKVAFDKTGTLTEGKPKVTDVVGASRSEKETMELAANLEIGSSHPLAVAILAKARENGYEPTSANDAKAIGGEGVIGTVNGASLFLGSPQAAEKRVPLSQELREQITRFNDKGKTVSVLLVGNEVAGLLAMRDEPRADAAAGIAALKELGISAVMLTGDNKRTAAAIAASLGIEPRAELMPQDKQRIVGEMQKAGEIVAKVGDGINDAPALAAADVGIAMGGGTDVALETADAAVLHGRVMDVANMVALSRATMSNIFQNITISLGLKAVFLVTTVLGITGLWPAILADTGATVLVTANAMRLLGWRGIK

Samples

Sample ID Description Type Environment
1 2506520007 Serratia plymuthica AS9 Isolate Rhizosphere
2 2506520008 Serratia plymuthica AS12 Isolate Unclassified
3 2508501042 Bradyrhizobium sp. WSM1253 Isolate Nodule
4 2508501071 Serratia proteamaculans S4 Isolate Rhizosphere
5 2508501114 Microvirga lotononidis WSM3557 Isolate Nodule
6 2510461076 Rhizobium leguminosarum bv. trifolii TA1 Isolate Nodule
7 2510917022 Rhizobium sp. AP16 Isolate Rhizosphere
8 2510917028 Rhizobium sp. CF122 Isolate Rhizosphere
9 2512875026 Sinorhizobium medicae WSM1115 Isolate Nodule
10 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
11 2513237144 Rhizobium sullae WSM1592 Isolate Nodule
12 2513237146 Rhizobium mongolense USDA 1844 (Illumina) Isolate Nodule
13 2513237159 Rhizobium giardinii bv. giardinii H152 Isolate Nodule
14 2515154134 Rhizobium gallicum bv. gallicum R602sp Isolate Nodule
15 2516143018 Ensifer sp. BR816 Isolate Nodule
16 2517093000 Rhizobium leguminosarum bv. trifolii SRDI943 Isolate Nodule
17 2522572158 Azospirillum halopraeferens DSM 3675 Isolate Unclassified
18 2524023210 Bradyrhizobium sp. Ai1a-2 Isolate Nodule
19 2582581283 Rhizobium sp. OK665 Isolate Rhizosphere
20 2582581307 Rhizobium sp. YR060 Isolate Rhizosphere
21 2582581308 Rhizobium sp. OK494 Isolate Rhizosphere
22 2582581315 Agrobacterium rhizogenes YR147 Isolate Rhizosphere
23 2582581865 Rhizobium sp. CF258 Isolate Rhizosphere
24 2582581866 Rhizobium sp. CF097 Isolate Rhizosphere
25 2585427527 Rhizobium lusitanum YR374 Isolate Rhizosphere
26 2585427530 Rhizobium tropici YR635 Isolate Rhizosphere
27 2585427531 Agrobacterium rhizogenes YR530 Isolate Rhizosphere
28 2585427608 Agrobacterium rhizogenes OV677 Isolate Rhizosphere
29 2585427609 Agrobacterium rhizogenes CF263 Isolate Rhizosphere
30 2585428125 Agrobacterium rhizogenes CF262 Isolate Rhizosphere
31 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
32 2599185156 Rhizobium sp. NFR03 Isolate Rhizoplane
33 2599185170 Rhizobium mongolense USDA 1844 (PacBio) Isolate Nodule
34 2599185352 Sinorhizobium sp. NFACC03 Isolate Rhizoplane
35 2615840626 Rhizobium lusitanum P1-7 Isolate Nodule
36 2615840698 Rhizobium multihospitium HAMBI 2975 Isolate Nodule
37 2617270742 Rhizobium miluonense HAMBI 2971 Isolate Nodule
38 2643221582 Rhizobium sp. Root651 Isolate Unclassified
39 2643221599 Rhizobium sp. Root708 Isolate Unclassified
40 2643221607 Rhizobium sp. Root73 Isolate Unclassified
41 2643221610 Ensifer sp. Root74 Isolate Unclassified
42 2643221634 Rhizobium sp. Root1203 Isolate Unclassified
43 2643221636 Rhizobium sp. Root1204 Isolate Unclassified
44 2643221668 Ensifer sp. Root423 Isolate Unclassified
45 2643221675 Ensifer sp. Root1298 Isolate Unclassified
46 2643221680 Ensifer sp. Root1312 Isolate Unclassified
47 2643221686 Rhizobium sp. Root1334 Isolate Unclassified
48 2643221688 Rhizobium sp. Root482 Isolate Unclassified
49 2643221723 Ensifer sp. Root278 Isolate Unclassified
50 2643221726 Ensifer sp. Root954 Isolate Unclassified
51 2654587920 Serratia plymuthica HRO-C48 Isolate Rhizosphere
52 2667528174 Rhizobium sp. NFR17 Isolate Rhizoplane
53 2687453601 Serratia plymuthica 3Rp8 Isolate Unclassified
54 2718217927 Rhizobium sp. N324 Isolate Nodule
55 2718218423 Rhizobium sp. N941 Isolate Nodule
56 2721755809 Rhizobium sp. N541 Isolate Nodule
57 2751185800 Brucella pituitosa AA2 Isolate Unclassified
58 2751185846 Paraburkholderia ribeironis STM 7296 Isolate Unclassified
59 2757320392 Phyllobacterium leguminum ORS 1419 Isolate Nodule
60 2767802442 Phyllobacterium brassicacearum 29-15 Isolate Rhizoplane
61 2772190666 Serratia surfactantfaciens YD25 Isolate Unclassified
62 2775507266 Rhizobium tropici PRF 81 Isolate Nodule
63 2791355091 Sinorhizobium sp. FG01 Isolate Nodule
64 2791355094 Sinorhizobium sp. BJ1 Isolate Nodule
65 2791355137 Paraburkholderia piptadeniae STM7183 Isolate Unclassified
66 2791355259 Rhizobium hidalgonense FH14 Isolate Nodule
67 2791355261 Rhizobium sp. J15 Isolate Nodule
68 2802429268 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
69 2806310673 Serratia quinivorans NCTC 13189 Isolate Rhizosphere
70 2818991448 Rhizobium miluonense 1234 Isolate Unclassified
71 2818991453 Rhizobium lusitanum 1158 Isolate Unclassified
72 2838029111 Rhizobium tropici SEMIA 4079 Isolate Nodule
73 2838035591 Rhizobium mongolense SEMIA 4087 Isolate Nodule
74 2838661181 Rhizobium mongolense SEMIA 402 Isolate Nodule
75 2842163707 Rhizobium leguminosarum SEMIA 460 Isolate Nodule
76 2842298080 Rhizobium leucaenae SEMIA 492 Isolate Nodule
77 2842304105 Rhizobium leguminosarum SEMIA 499 Isolate Nodule
78 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule
79 2842357229 Rhizobium leucaenae SEMIA 4015 Isolate Nodule
80 2842475841 Rhizobium tropici SEMIA 4059 Isolate Nodule
81 2842482326 Rhizobium lusitanum SEMIA 4060 Isolate Nodule
82 2842502639 Rhizobium tropici SEMIA 4063 Isolate Nodule
83 2842509118 Rhizobium paranaense SEMIA 4064 Isolate Nodule
84 2842521101 Rhizobium giardinii SEMIA 4084 Isolate Nodule
85 2842694124 Methylopila sp. R-72369 Isolate Unclassified
86 2842922631 Pararhizobium sp. R-72066 Isolate Unclassified
87 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
88 2852387548 Rhizobium jaguaris CCGE525 Isolate Unclassified
89 2854911287 Brucella lupini LUP21 Isolate Unclassified
90 2861691609 Methylorubrum thiocyanatum DSM 11490 Isolate Rhizosphere
91 2869551831 Serratia inhibens PRI-2C Isolate Rhizosphere
92 2884298095 Microvirga thermotolerans HR1 Isolate Rhizosphere
93 2885383462 Bradyrhizobium sp. Leo170 Isolate Unclassified
94 2888343758 Mesorhizobium sp. AA22 Isolate Unclassified
95 2888366609 Serratia sp. NGAS9 Isolate Rhizosphere
96 2888373701 Serratia rhizosphaerae KUDC3025 Isolate Rhizosphere
97 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
98 2891373044 Shinella sp. AETb1-6 Isolate Rhizosphere
99 2894232714 Microvirga tunisiensis Lmie10 Isolate Nodule
100 2897803580 Azospirillum doebereinerae GSF71 Isolate Unclassified
101 2903768456 Bradyrhizobium sp. Leo121 Isolate Unclassified
102 2904615490 Paraburkholderia franconis CNPSo 3157 Isolate Unclassified
103 2906626472 Bradyrhizobium hipponense aSej3 Isolate Unclassified
104 2919408235 Rhizobium miluonense 3199 Isolate Unclassified
105 2920822456 Ensifer sesbaniae CCBAU 65729 Isolate Unclassified
106 2923556063 Rhizobium tibeticum 3740 Isolate Unclassified
107 2932406140 Serratia sp. 2723 Isolate Rhizosphere
108 2933016740 Rhizobium sp. SEMIA 4085 Isolate Nodule
109 2933570622 Rhizobium leguminosarum SEMIA 409 Isolate Nodule
110 2935901341 Rhizobium leguminosarum SEMIA 4082 Isolate Nodule
111 2937967321 Serratia sp. YC16 Isolate Unclassified
112 2939577877 Serratia sp. 509 Isolate Rhizosphere
113 2939669807 Kaistia defluvii 3207 Isolate Rhizosphere
114 2989349275 Shinella kummerowiae CCBAU 25048 Isolate Unclassified
115 2989771324 Rhizobium rhizolycopersici DBTS2 Isolate Rhizosphere
116 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
117 3005416602 Rhizobium sp. P40RR-XXII Isolate Rhizosphere
118 3005452660 Rhizobium grahamii BG7 Isolate Unclassified
119 3005506211 Bradyrhizobium diazoefficiens SZCCT0449 Isolate Unclassified
120 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
121 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
122 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
123 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
124 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
125 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
126 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
127 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
128 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
129 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
130 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
131 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
132 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
133 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
134 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
135 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
136 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
137 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
138 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
139 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
140 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
141 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
142 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
143 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
144 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
145 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
146 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
147 3300013249 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.3_F06 Metagenome Rhizosphere
148 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
149 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
150 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
151 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
152 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
153 3300022739 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - brown nodules Metagenome Nodule
154 3300022740 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - pink nodules Metagenome Nodule
155 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
156 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
157 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
158 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
159 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
160 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
161 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
162 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
163 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
164 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
165 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
166 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
167 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
168 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
169 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
170 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
171 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
172 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
173 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
174 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
175 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
176 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
177 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
178 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
179 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
180 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
181 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
182 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
183 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
184 3300031967 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - elongated nodules Metagenome Nodule
185 3300033430 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - small nodules Metagenome Nodule
186 3300033464 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - branched nodules Metagenome Nodule
187 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
188 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
189 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
190 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
191 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
192 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
193 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
194 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
195 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
196 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
197 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
198 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
199 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
200 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
201 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
202 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
203 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
204 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
205 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
206 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
207 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
208 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
209 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
210 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
211 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
212 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
213 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
214 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
215 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
216 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
217 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
218 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
219 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
220 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
221 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
222 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
223 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
224 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
225 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
226 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
227 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
228 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
229 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
230 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
231 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
232 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
233 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
234 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
235 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
236 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
237 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
238 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
239 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
240 640753048 Serratia proteamaculans 568 Isolate Endosphere
241 8001845381 Ancylobacter sonchi VKM B-3145 Isolate Unclassified
242 8002285264 Aminobacter anthyllidis LMG 26462 Isolate Nodule
243 8004592986 Serratia sp. S119 Isolate Unclassified
244 8005275841 Rhizobium sp. N4311 Isolate Nodule
245 8005307578 Rhizobium leguminosarum bv. phaseoli LCS0306 Isolate Unclassified
246 8005314921 Rhizobium sp. P28RR-XV Isolate Rhizosphere
247 8005382845 Rhizobium sp. R634 Isolate Nodule
248 8005484373 Rhizobium tropici SARCC-755 Isolate Nodule
249 8005645114 Rhizobium tropici IGFRI Rhizo-19 Isolate Rhizosphere
250 8005658619 Rhizobium terrae CC-HIH110 Isolate Unclassified
251 8005682033 Rhizobium dioscoreae S-93 Isolate Unclassified
252 8005688590 Rhizobium bangladeshense 1024 Isolate Nodule
253 8015394850 Serratia sp. PGPR-27 Isolate Rhizosphere
254 8023680758 Rhizobium leguminosarum SARCC-132 Isolate Nodule
255 8046767195 Rhizobium calliandrae CCGE524 Isolate Unclassified
256 8055693939 Hafnia alvei A23BA Isolate Rhizosphere
257 8057575449 Rhizobium mayense CCGE526 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 54.84
Metatranscriptomes 0.65
Isolates 44.52

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.94
Nodule 19.03
Rhizoplane 2.58
Rhizosphere 37.1
Stem 0
Stem Tuber 0
Unclassified 29.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25155J39150_1000015 3300002704 Bacteria 178839
2 JGI25156J39149_1000007 3300002705 Bacteria 252108
3 JGI25162J39368_1000285 3300002737 Bacteria 47453
4 JGI25162J39368_1000352 3300002737 Bacteria 39535
5 JGI25154J39366_1000051 3300002738 Bacteria 123608
6 JGI25157J39369_1000012 3300002741 Bacteria 205167
7 JGI25159J45721_1000023 3300002987 Bacteria 116643
8 JGI25165J46597_1000102 3300003214 Bacteria 155002
9 JGI25165J46597_1000198 3300003214 Bacteria 88888
10 rootL2_10016804 3300003322 Bacteria 37660
11 JGI25160J50197_1000061 3300003354 Bacteria 116643
12 JGI25161J50226_1000200 3300003374 Bacteria 39159
13 Ga0006562J51391_1006655 3300003578 Bacteria 4078
14 Ga0006562J51391_1010800 3300003578 Bacteria 3004
15 Ga0055528_1000064 3300003790 Bacteria 85584
16 Ga0055543_1000741 3300004625 Bacteria 16504
17 Ga0065165_1000047 3300005262 Bacteria 197811
18 Ga0068855_100069211 3300005563 Bacteria 4108
19 Ga0068856_100055184 3300005614 Bacteria 3921
20 Ga0075365_10000344 3300006038 Bacteria 16625
21 Ga0079104_1001324 3300006946 Bacteria 16991
22 Ga0079104_1003247 3300006946 Bacteria 7798
23 Ga0105251_10000386 3300009011 Bacteria 43038
24 Ga0105251_10001812 3300009011 Bacteria 17696
25 Ga0105251_10002251 3300009011 Bacteria 15336
26 Ga0105244_10004924 3300009036 Bacteria 9034
27 Ga0105250_10005422 3300009092 Bacteria 5722
28 Ga0105240_10000216 3300009093 Bacteria 115800
29 Ga0105247_10000171 3300009101 Bacteria 64198
30 Ga0105241_10000010 3300009174 Bacteria 253836
31 Ga0105239_10043669 3300010375 Bacteria 4914
32 Ga0157373_10004392 3300013100 Bacteria 10629
33 Ga0157370_10000183 3300013104 Bacteria 78649
34 Ga0171463_1001 3300013249 Bacteria 1406070
35 Ga0182008_10005532 3300014497 Bacteria 7183
36 Ga0182007_10001098 3300015262 Bacteria 14707
37 Ga0182005_1001151 3300015265 Bacteria 10966
38 Ga0183363_1184 3300015690 Bacteria 13442
39 Ga0163161_10000006 3300017792 Bacteria 302708
40 Ga0228711_1000006 3300022739 Bacteria 202437
41 Ga0228710_1000004 3300022740 Bacteria 250560
42 Ga0209435_100006 3300025206 Bacteria 542459
43 Ga0209437_100042 3300025233 Bacteria 444095
44 Ga0209437_100062 3300025233 Bacteria 336900
45 Ga0209646_1000015 3300025246 Bacteria 542459
46 Ga0209026_1000046 3300025250 Bacteria 262031
47 Ga0209759_1000005 3300025256 Bacteria 542459
48 Ga0209233_1000082 3300025261 Bacteria 336320
49 Ga0209233_1000103 3300025261 Bacteria 284123
50 Ga0209233_1000428 3300025261 Bacteria 30724
51 Ga0209673_1000341 3300025273 Bacteria 85808
52 Ga0209130_1000005 3300025284 Bacteria 599620
53 Ga0209676_1003445 3300025292 Bacteria 9729
54 Ga0209025_1000832 3300025294 Bacteria 49004
55 Ga0209564_1000590 3300025295 Bacteria 57280
56 Ga0209564_1000807 3300025295 Bacteria 42868
57 Ga0209050_1008991 3300025298 Bacteria 5205
58 Ga0209256_1000308 3300025299 Bacteria 85808
59 Ga0209256_1000741 3300025299 Bacteria 42804
60 Ga0209256_1003832 3300025299 Bacteria 10068
61 Ga0207426_1000015 3300025302 Bacteria 599316
62 Ga0209257_1007159 3300025304 Bacteria 6857
63 Ga0207696_1000046 3300025711 Bacteria 291327
64 Ga0207655_1000208 3300025728 Bacteria 102775
65 Ga0207713_1000056 3300025735 Bacteria 217615
66 Ga0207713_1000075 3300025735 Bacteria 179242
67 Ga0207713_1000613 3300025735 Bacteria 35114
68 Ga0207710_10000024 3300025900 Bacteria 319633
69 Ga0207654_10000010 3300025911 Bacteria 304367
70 Ga0207695_10000319 3300025913 Bacteria 116116
71 Ga0207671_10000078 3300025914 Bacteria 150705
72 Ga0207667_10027704 3300025949 Bacteria 6164
73 Ga0207698_10070731 3300026142 Bacteria 2766
74 Ga0209281_1000102 3300027111 Bacteria 221665
75 Ga0209281_1000139 3300027111 Bacteria 179588
76 Ga0209282_1000013 3300027666 Bacteria 215053
77 Ga0209813_10005750 3300027866 Bacteria 3027
78 Ga0307515_10001768 3300028794 Bacteria 48147
79 Ga0307515_10004490 3300028794 Bacteria 28866
80 Ga0268256_1005042 3300030500 Bacteria 5292
81 Ga0315914_1000004 3300031967 Bacteria 288534
82 Ga0315913_1000055 3300033430 Bacteria 58182
83 Ga0315915_1000003 3300033464 Bacteria 407996
84 Ga0395905_0002494 3300037471 Bacteria 20360
85 Ga0439436_0000963 3300041404 Bacteria 7952
86 Ga0439465_0005721 3300041413 Bacteria 3956
87 Ga0439432_003291 3300042006 Bacteria 6003
88 Ga0439432_011889 3300042006 Bacteria 2991
89 Ga0439452_000212 3300042010 Bacteria 41258
90 Ga0466963_0008854 3300044694 Bacteria 6040
91 Ga0466970_0000711 3300044765 Bacteria 16299
92 Ga0466958_0018744 3300045836 Bacteria 4021
93 Ga0466967_0076604 3300045976 Bacteria 3009
94 Ga0495627_000200 3300046453 Bacteria 65358
95 Ga0495650_0023591 3300046471 Bacteria 2926
96 Ga0495610_0004612 3300046512 Bacteria 10093
97 Ga0495620_0016318 3300046515 Bacteria 3728
98 Ga0495654_0000122 3300046530 Bacteria 86717
99 Ga0495654_0000823 3300046530 Bacteria 23556
100 Ga0495589_0000121 3300046794 Bacteria 73070
101 Ga0496100_0003185 3300048903 Bacteria 8522
102 Ga0496101_0019057 3300048904 Bacteria 4676
103 Ga0496102_0012542 3300048905 Bacteria 7338
104 Ga0496103_0015068 3300048906 Bacteria 4595
105 Ga0496116_0000058 3300048919 Bacteria 279767
106 Ga0496116_0003524 3300048919 Bacteria 15408
107 Ga0496117_0000450 3300048920 Bacteria 68428
108 Ga0496117_0005584 3300048920 Bacteria 13155
109 Ga0496118_0000844 3300048921 Bacteria 48654
110 Ga0496118_0006664 3300048921 Bacteria 12600
111 Ga0496119_0003974 3300048922 Bacteria 14962
112 Ga0496119_0004011 3300048922 Bacteria 14887
113 Ga0496119_0005065 3300048922 Bacteria 12805
114 Ga0496119_0005626 3300048922 Bacteria 11914
115 Ga0496120_0001708 3300048923 Bacteria 25110
116 Ga0496120_0003004 3300048923 Bacteria 15994
117 Ga0496120_0003021 3300048923 Bacteria 15931
118 Ga0496120_0009994 3300048923 Bacteria 6666
119 Ga0496121_0006713 3300048924 Bacteria 14137
120 Ga0496122_0000606 3300048925 Bacteria 73602
121 Ga0496122_0005156 3300048925 Bacteria 15745
122 Ga0496122_0014623 3300048925 Bacteria 7574
123 Ga0496123_0000450 3300048926 Bacteria 73652
124 Ga0496123_0008062 3300048926 Bacteria 9747
125 Ga0496124_0000304 3300048927 Bacteria 90806
126 Ga0496124_0000704 3300048927 Bacteria 54690
127 Ga0496124_0045254 3300048927 Bacteria 3774
128 Ga0496124_0074077 3300048927 Bacteria 2815
129 Ga0496125_0001354 3300048928 Bacteria 36111
130 Ga0496125_0003535 3300048928 Bacteria 18835
131 Ga0496125_0003868 3300048928 Bacteria 17714
132 Ga0496126_0009081 3300048929 Bacteria 10625
133 Ga0495678_018400 3300049459 Bacteria 3142
134 Ga0501031_0020115 3300049568 Bacteria 4350
135 Ga0501032_0000121 3300049569 Bacteria 64837
136 Ga0501032_0000336 3300049569 Bacteria 39319
137 Ga0501032_0002309 3300049569 Bacteria 14970
138 Ga0501033_0000090 3300049570 Bacteria 86596
139 Ga0501033_0000209 3300049570 Bacteria 55990
140 Ga0501034_0000140 3300049571 Bacteria 134996
141 Ga0501034_0000318 3300049571 Bacteria 85198
142 Ga0501034_0000722 3300049571 Bacteria 50102
143 Ga0501034_0003308 3300049571 Bacteria 18397
144 Ga0501036_0000023 3300049572 Bacteria 111054
145 Ga0501036_0000048 3300049572 Bacteria 75517
146 Ga0501037_0000024 3300049573 Bacteria 146046
147 Ga0501037_0000117 3300049573 Bacteria 74544
148 Ga0501038_0000021 3300049574 Bacteria 151672
149 Ga0501038_0000247 3300049574 Bacteria 45720
150 Ga0501038_0000343 3300049574 Bacteria 39974
151 Ga0501039_0000017 3300049575 Bacteria 189412
152 Ga0501039_0000026 3300049575 Bacteria 150606
153 Ga0501039_0000119 3300049575 Bacteria 54295
154 Ga0501043_0000146 3300049579 Bacteria 65887
155 Ga0501043_0000520 3300049579 Bacteria 34650
156 Ga0501043_0007683 3300049579 Bacteria 8540
157 Ga0501043_0024805 3300049579 Bacteria 4704
158 Ga0501046_0028921 3300049580 Bacteria 4510
159 Ga0501047_0000416 3300049581 Bacteria 47570
160 Ga0501070_0018804 3300049586 Bacteria 5796
161 Ga0501072_0016707 3300049588 Bacteria 5638
162 Ga0501035_0000021 3300049822 Bacteria 209085
163 Ga0501035_0000260 3300049822 Bacteria 62703
164 Ga0501035_0012479 3300049822 Bacteria 7849
165 Ga0501044_0000094 3300049823 Bacteria 109728
166 nmdc:mga06z11_4308_c1 3300050494 Bacteria 5591
167 Ga0500608_003567 3300053122 Bacteria 5863
168 Ga0500568_0000514 3300053139 Bacteria 28491
169 Ga0500590_000016 3300053148 Bacteria 47232
170 Ga0500616_0000181 3300053153 Bacteria 104316
171 Ga0500624_000655 3300053157 Bacteria 9026
172 Ga0500636_0062312 3300053177 Bacteria 2175

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053177 Ga0500636_0062312 Ga0500636_0062312_158_2077 639
2 3300048929 Ga0496126_0009081 Ga0496126_0009081_8058_10286 656
3 3300048927 Ga0496124_0000704 Ga0496124_0000704_26082_28313 661
4 3300048928 Ga0496125_0003535 Ga0496125_0003535_2345_4582 664
5 3300048920 Ga0496117_0005584 Ga0496117_0005584_6293_8530 667
6 3300048922 Ga0496119_0004011 Ga0496119_0004011_6666_8984 676
7 3300048923 Ga0496120_0001708 Ga0496120_0001708_8133_10451 676
8 3300042006 Ga0439432_011889 Ga0439432_011889_181_2382 677
9 3300046530 Ga0495654_0000823 Ga0495654_0000823_10344_12692 678
10 3300006946 Ga0079104_1003247 Ga0079104_10032474 680
11 3300014497 Ga0182008_10005532 Ga0182008_100055322 680
12 3300027866 Ga0209813_10005750 Ga0209813_100057502 680
13 3300042006 Ga0439432_003291 Ga0439432_003291_2151_4202 680
14 3300046794 Ga0495589_0000121 Ga0495589_0000121_59431_61779 680
15 3300050494 nmdc:mga06z11_4308_c1 nmdc:mga06z11_4308_c1_885_3098 680
16 3300048925 Ga0496122_0000606 Ga0496122_0000606_23038_25272 686
17 3300048926 Ga0496123_0000450 Ga0496123_0000450_23088_25322 686
18 3300049571 Ga0501034_0003308 Ga0501034_0003308_11893_14106 687
19 3300048922 Ga0496119_0003974 Ga0496119_0003974_5775_8093 689
20 3300048923 Ga0496120_0003004 Ga0496120_0003004_5673_7991 689
21 3300048927 Ga0496124_0000304 Ga0496124_0000304_55645_57963 689
22 3300042010 Ga0439452_000212 Ga0439452_000212_6152_8365 691
23 3300022739 Ga0228711_1000006 Ga0228711_1000006166 692
24 3300022740 Ga0228710_1000004 Ga0228710_1000004217 692
25 3300027111 Ga0209281_1000102 Ga0209281_1000102149 692
26 3300027666 Ga0209282_1000013 Ga0209282_1000013184 692
27 3300031967 Ga0315914_1000004 Ga0315914_1000004219 692
28 3300033430 Ga0315913_1000055 Ga0315913_100005530 692
29 3300033464 Ga0315915_1000003 Ga0315915_1000003326 692
30 3300048927 Ga0496124_0074077 Ga0496124_0074077_482_2743 693
31 3300053122 Ga0500608_003567 Ga0500608_003567_2391_4718 693
32 3300006946 Ga0079104_1001324 Ga0079104_100132412 694
33 3300009011 Ga0105251_10000386 Ga0105251_1000038629 694
34 3300009011 Ga0105251_10001812 Ga0105251_1000181210 694
35 3300009092 Ga0105250_10005422 Ga0105250_100054222 694
36 3300009101 Ga0105247_10000171 Ga0105247_1000017110 694
37 3300009174 Ga0105241_10000010 Ga0105241_10000010219 694
38 3300013100 Ga0157373_10004392 Ga0157373_1000439210 694
39 3300017792 Ga0163161_10000006 Ga0163161_1000000654 694
40 3300025711 Ga0207696_1000046 Ga0207696_100004654 694
41 3300025735 Ga0207713_1000056 Ga0207713_100005654 694
42 3300025735 Ga0207713_1000075 Ga0207713_1000075134 694
43 3300025900 Ga0207710_10000024 Ga0207710_10000024239 694
44 3300025911 Ga0207654_10000010 Ga0207654_10000010220 694
45 3300027111 Ga0209281_1000139 Ga0209281_1000139104 694
46 3300046453 Ga0495627_000200 Ga0495627_000200_55370_57718 694
47 3300048919 Ga0496116_0000058 Ga0496116_0000058_222030_224378 694
48 3300048920 Ga0496117_0000450 Ga0496117_0000450_16390_18738 694
49 3300048921 Ga0496118_0006664 Ga0496118_0006664_9967_12315 694
50 3300048923 Ga0496120_0009994 Ga0496120_0009994_2156_4504 694
51 iso_pu_bacteria 2506520007 2506576180 694
52 iso_pu_bacteria 2506520008 2506581318 694
53 iso_pu_bacteria 2508501071 2508850151 694
54 iso_pu_bacteria 2654587920 2656277201 694
55 iso_pu_bacteria 2687453601 2689442610 694
56 iso_pu_bacteria 2772190666 2772436755 694
57 iso_pu_bacteria 2806310673 2807179000 694
58 iso_pu_bacteria 2869551831 2869552027 694
59 iso_pu_bacteria 2888366609 2888366802 694
60 iso_pu_bacteria 2937967321 2937971455 694
61 iso_pu_bacteria 640753048 640935700 694
62 iso_pu_bacteria 8004592986 8004593539 694
63 iso_pu_bacteria 8015394850 8015397370 694
64 iso_pu_bacteria 8055693939 8055694155 694
65 3300009011 Ga0105251_10002251 Ga0105251_1000225110 695
66 3300009036 Ga0105244_10004924 Ga0105244_100049248 695
67 3300025728 Ga0207655_1000208 Ga0207655_100020853 695
68 3300025735 Ga0207713_1000613 Ga0207713_100061330 695
69 iso_pu_bacteria 2888373701 2888375557 695
70 iso_pu_bacteria 2932406140 2932409073 695
71 iso_pu_bacteria 2939577877 2939581623 695
72 3300006038 Ga0075365_10000344 Ga0075365_1000034414 696
73 3300053157 Ga0500624_000655 Ga0500624_000655_2870_5029 696
74 3300046471 Ga0495650_0023591 Ga0495650_0023591_90_2405 698
75 3300046512 Ga0495610_0004612 Ga0495610_0004612_2675_4990 698
76 3300046515 Ga0495620_0016318 Ga0495620_0016318_519_2834 698
77 3300049459 Ga0495678_018400 Ga0495678_018400_313_2628 698
78 3300028794 Ga0307515_10001768 Ga0307515_1000176833 700
79 iso_pu_bacteria 2884298095 2884298107 700
80 iso_pu_bacteria 2894232714 2894235046 700
81 iso_pu_bacteria 2989771324 2989775703 700
82 3300049568 Ga0501031_0020115 Ga0501031_0020115_1603_3831 701
83 3300049569 Ga0501032_0000336 Ga0501032_0000336_12921_15149 701
84 3300049570 Ga0501033_0000090 Ga0501033_0000090_68769_70997 701
85 3300049571 Ga0501034_0000140 Ga0501034_0000140_106656_108884 701
86 3300049572 Ga0501036_0000048 Ga0501036_0000048_40088_42316 701
87 3300049573 Ga0501037_0000024 Ga0501037_0000024_45579_47807 701
88 3300049574 Ga0501038_0000247 Ga0501038_0000247_30572_32800 701
89 3300049575 Ga0501039_0000017 Ga0501039_0000017_156613_158841 701
90 3300049579 Ga0501043_0000146 Ga0501043_0000146_24171_26399 701
91 3300049580 Ga0501046_0028921 Ga0501046_0028921_463_2691 701
92 3300049822 Ga0501035_0000021 Ga0501035_0000021_50257_52485 701
93 iso_pu_bacteria 2522572158 2523107272 701
94 3300005563 Ga0068855_100069211 Ga0068855_1000692112 702
95 3300009093 Ga0105240_10000216 Ga0105240_100002169 702
96 3300013104 Ga0157370_10000183 Ga0157370_100001833 702
97 3300025913 Ga0207695_10000319 Ga0207695_1000031994 702
98 3300025914 Ga0207671_10000078 Ga0207671_1000007894 702
99 3300025949 Ga0207667_10027704 Ga0207667_100277042 702
100 3300026142 Ga0207698_10070731 Ga0207698_100707311 702
101 3300048903 Ga0496100_0003185 Ga0496100_0003185_4109_6442 702
102 3300048904 Ga0496101_0019057 Ga0496101_0019057_1027_3360 702
103 3300048905 Ga0496102_0012542 Ga0496102_0012542_1113_3446 702
104 3300048906 Ga0496103_0015068 Ga0496103_0015068_64_2397 702
105 3300048919 Ga0496116_0003524 Ga0496116_0003524_8349_10682 702
106 3300048921 Ga0496118_0000844 Ga0496118_0000844_7987_10320 702
107 3300048922 Ga0496119_0005065 Ga0496119_0005065_7652_9985 702
108 3300048923 Ga0496120_0003021 Ga0496120_0003021_8477_10810 702
109 3300048924 Ga0496121_0006713 Ga0496121_0006713_6304_8637 702
110 3300048925 Ga0496122_0005156 Ga0496122_0005156_6667_9000 702
111 3300048926 Ga0496123_0008062 Ga0496123_0008062_5521_7854 702
112 3300048928 Ga0496125_0003868 Ga0496125_0003868_8911_11244 702
113 3300053148 Ga0500590_000016 Ga0500590_000016_30890_33115 702
114 iso_pu_bacteria 2513237098 2513672769 702
115 iso_pu_bacteria 2751185800 2753360445 702
116 iso_pu_bacteria 2757320392 2757570376 702
117 iso_pu_bacteria 2854911287 2854912844 702
118 iso_pu_bacteria 2903768456 2903775413 702
119 iso_pu_bacteria 2906626472 2906632296 702
120 iso_pu_bacteria 3003665799 3003672687 702
121 iso_pu_bacteria 2524023210 2524470257 703
122 iso_pu_bacteria 2842694124 2842696445 703
123 iso_pu_bacteria 2885383462 2885387189 703
124 iso_pu_bacteria 2802429268 2804753895 704
125 iso_pu_bacteria 2889306138 2889309980 704
126 3300015262 Ga0182007_10001098 Ga0182007_100010984 705
127 3300015265 Ga0182005_1001151 Ga0182005_10011516 705
128 3300025261 Ga0209233_1000428 Ga0209233_10004286 705
129 3300049579 Ga0501043_0024805 Ga0501043_0024805_834_3059 705
130 3300053139 Ga0500568_0000514 Ga0500568_0000514_17417_19819 705
131 iso_pu_bacteria 2767802442 2770199264 705
132 iso_pu_bacteria 2842333319 2842341337 705
133 iso_pu_bacteria 2861691609 2861695360 705
134 3300046530 Ga0495654_0000122 Ga0495654_0000122_5468_7792 706
135 3300003578 Ga0006562J51391_1006655 Ga0006562J51391_10066552 707
136 3300045976 Ga0466967_0076604 Ga0466967_0076604_727_2982 707
137 3300048927 Ga0496124_0045254 Ga0496124_0045254_13_2232 707
138 3300028794 Ga0307515_10004490 Ga0307515_1000449016 708
139 iso_pu_bacteria 2597490356 2599100596 708
140 3300002737 JGI25162J39368_1000352 JGI25162J39368_10003527 709
141 3300003214 JGI25165J46597_1000198 JGI25165J46597_100019855 709
142 3300025233 Ga0209437_100042 Ga0209437_100042201 709
143 3300025261 Ga0209233_1000103 Ga0209233_1000103201 709
144 3300037471 Ga0395905_0002494 Ga0395905_0002494_13543_15816 709
145 3300049569 Ga0501032_0000121 Ga0501032_0000121_29442_31727 709
146 3300049570 Ga0501033_0000209 Ga0501033_0000209_4946_7231 709
147 3300049571 Ga0501034_0000722 Ga0501034_0000722_34203_36488 709
148 3300049572 Ga0501036_0000023 Ga0501036_0000023_60010_62295 709
149 3300049573 Ga0501037_0000117 Ga0501037_0000117_39149_41434 709
150 3300049574 Ga0501038_0000343 Ga0501038_0000343_33111_35396 709
151 3300049575 Ga0501039_0000119 Ga0501039_0000119_4579_6864 709
152 3300049579 Ga0501043_0000520 Ga0501043_0000520_27787_30072 709
153 3300049581 Ga0501047_0000416 Ga0501047_0000416_38991_41276 709
154 3300049586 Ga0501070_0018804 Ga0501070_0018804_40_2325 709
155 3300049822 Ga0501035_0000260 Ga0501035_0000260_13011_15296 709
156 3300049823 Ga0501044_0000094 Ga0501044_0000094_60010_62295 709
157 iso_pu_bacteria 2513237146 2513926795 709
158 iso_pu_bacteria 2599185170 2599420712 709
159 iso_pu_bacteria 2838035591 2838040614 709
160 iso_pu_bacteria 2838661181 2838664998 709
161 3300048928 Ga0496125_0001354 Ga0496125_0001354_28063_30285 710
162 iso_pu_bacteria 2512875026 2512973312 710
163 iso_pu_bacteria 2848858292 2848864118 710
164 iso_pu_bacteria 2933016740 2933017516 710
165 iso_pu_bacteria 3005506211 3005508304 710
166 iso_pu_bacteria 2508501042 2508698271 711
167 iso_pu_bacteria 2516143018 2516208358 711
168 3300010375 Ga0105239_10043669 Ga0105239_100436694 713
169 iso_pu_bacteria 2791355091 2792624532 713
170 3300003578 Ga0006562J51391_1010800 Ga0006562J51391_10108001 714
171 iso_pu_bacteria 2513237144 2513908345 714
172 iso_pu_bacteria 2643221607 2644047791 714
173 iso_pu_bacteria 2643221686 2644481953 714
174 3300025292 Ga0209676_1003445 Ga0209676_10034454 715
175 3300025295 Ga0209564_1000590 Ga0209564_100059054 715
176 3300025298 Ga0209050_1008991 Ga0209050_10089912 715
177 3300025299 Ga0209256_1000741 Ga0209256_10007414 715
178 3300025299 Ga0209256_1003832 Ga0209256_10038326 715
179 3300025304 Ga0209257_1007159 Ga0209257_10071592 715
180 iso_pu_bacteria 2791355094 2792643394 715
181 iso_pu_bacteria 2791355259 2793318355 715
182 iso_pu_bacteria 2891373044 2891376187 715
183 3300025294 Ga0209025_1000832 Ga0209025_100083246 716
184 iso_pu_bacteria 2643221599 2644006239 716
185 iso_pu_bacteria 2791355261 2793331594 716
186 iso_pu_bacteria 8005382845 8005386403 716
187 iso_pu_bacteria 8005688590 8005691504 716
188 iso_pu_bacteria 2510461076 2510896406 717
189 iso_pu_bacteria 2510917028 2511187215 717
190 iso_pu_bacteria 2515154134 2515744290 717
191 iso_pu_bacteria 2517093000 2517096787 717
192 iso_pu_bacteria 2842163707 2842170290 717
193 iso_pu_bacteria 2923556063 2923558947 717
194 iso_pu_bacteria 2935901341 2935908014 717
195 iso_pu_bacteria 2939669807 2939669927 717
196 iso_pu_bacteria 8005307578 8005311386 717
197 3300049588 Ga0501072_0016707 Ga0501072_0016707_2318_4552 718
198 iso_pu_bacteria 2718217927 2719387397 718
199 iso_pu_bacteria 2718218423 2721401032 718
200 iso_pu_bacteria 2721755809 2724039845 718
201 iso_pu_bacteria 2842304105 2842310404 718
202 iso_pu_bacteria 2897803580 2897808412 718
203 iso_pu_bacteria 2933570622 2933576844 718
204 iso_pu_bacteria 2989349275 2989350920 718
205 iso_pu_bacteria 8005275841 8005282145 718
206 iso_pu_bacteria 8023680758 8023683698 718
207 3300002737 JGI25162J39368_1000285 JGI25162J39368_100028534 719
208 3300003214 JGI25165J46597_1000102 JGI25165J46597_100010281 719
209 3300005614 Ga0068856_100055184 Ga0068856_1000551842 719
210 3300025233 Ga0209437_100062 Ga0209437_100062186 719
211 3300025261 Ga0209233_1000082 Ga0209233_1000082186 719
212 3300048922 Ga0496119_0005626 Ga0496119_0005626_4038_6389 719
213 3300048925 Ga0496122_0014623 Ga0496122_0014623_4449_6800 719
214 iso_pu_bacteria 3005452660 3005455382 719
215 iso_pu_bacteria 8005658619 8005659462 719
216 3300030500 Ga0268256_1005042 Ga0268256_10050423 720
217 iso_pu_bacteria 2582581866 2585394771 720
218 iso_pu_bacteria 2888343758 2888349928 720
219 iso_pu_bacteria 8001845381 8001847008 720
220 3300044694 Ga0466963_0008854 Ga0466963_0008854_713_3010 721
221 3300044765 Ga0466970_0000711 Ga0466970_0000711_6261_8558 721
222 3300045836 Ga0466958_0018744 Ga0466958_0018744_1305_3602 721
223 iso_pu_bacteria 2643221634 2644191559 721
224 iso_pu_bacteria 2510917022 2511132427 722
225 iso_pu_bacteria 2582581307 2585272960 722
226 iso_pu_bacteria 2585427531 2585558081 722
227 iso_pu_bacteria 2585427608 2585897528 722
228 iso_pu_bacteria 2585427609 2585904881 722
229 iso_pu_bacteria 2585428125 2587980003 722
230 3300002987 JGI25159J45721_1000023 JGI25159J45721_1000023117 723
231 3300003354 JGI25160J50197_1000061 JGI25160J50197_1000061117 723
232 3300003374 JGI25161J50226_1000200 JGI25161J50226_100020036 723
233 3300004625 Ga0055543_1000741 Ga0055543_100074113 723
234 3300005262 Ga0065165_1000047 Ga0065165_10000474 723
235 3300025284 Ga0209130_1000005 Ga0209130_1000005595 723
236 3300025302 Ga0207426_1000015 Ga0207426_10000154 723
237 iso_pu_bacteria 2599185156 2599332691 723
238 iso_pu_bacteria 2842922631 2842922966 723
239 iso_pu_bacteria 2842298080 2842299105 724
240 iso_pu_bacteria 2842357229 2842358571 724
241 iso_pu_bacteria 2842509118 2842511964 724
242 iso_pu_bacteria 2852387548 2852389407 724
243 iso_pu_bacteria 8046767195 8046768528 724
244 iso_pu_bacteria 8057575449 8057578017 724
245 3300003790 Ga0055528_1000064 Ga0055528_100006428 725
246 3300025273 Ga0209673_1000341 Ga0209673_100034131 725
247 3300025295 Ga0209564_1000807 Ga0209564_100080719 725
248 3300025299 Ga0209256_1000308 Ga0209256_100030831 725
249 iso_pu_bacteria 2508501114 2509074957 725
250 iso_pu_bacteria 2513237159 2513996302 726
251 iso_pu_bacteria 2842521101 2842521260 726
252 3300049569 Ga0501032_0002309 Ga0501032_0002309_1627_4236 727
253 3300049571 Ga0501034_0000318 Ga0501034_0000318_22976_25585 727
254 3300049574 Ga0501038_0000021 Ga0501038_0000021_88399_91008 727
255 3300049575 Ga0501039_0000026 Ga0501039_0000026_88383_90992 727
256 3300049579 Ga0501043_0007683 Ga0501043_0007683_2940_5549 727
257 3300049822 Ga0501035_0012479 Ga0501035_0012479_143_2752 727
258 iso_pu_bacteria 2643221582 2643917213 727
259 3300013249 Ga0171463_1001 Ga0171463_10011397 728
260 3300015690 Ga0183363_1184 Ga0183363_11848 728
261 3300041404 Ga0439436_0000963 Ga0439436_0000963_4486_6816 728
262 3300041413 Ga0439465_0005721 Ga0439465_0005721_1125_3455 728
263 iso_pu_bacteria 2751185846 2753571170 728
264 iso_pu_bacteria 2791355137 2792840324 728
265 iso_pu_bacteria 2904615490 2904620343 728
266 3300053153 Ga0500616_0000181 Ga0500616_0000181_25343_27754 730
267 iso_pu_bacteria 2582581283 2585164472 730
268 iso_pu_bacteria 2599185352 2600196686 731
269 iso_pu_bacteria 2643221610 2644065817 731
270 iso_pu_bacteria 2643221668 2644380122 731
271 iso_pu_bacteria 2643221675 2644417148 731
272 iso_pu_bacteria 2643221680 2644450544 731
273 iso_pu_bacteria 2643221688 2644495462 731
274 iso_pu_bacteria 2643221723 2644671329 731
275 iso_pu_bacteria 2643221726 2644693031 731
276 iso_pu_bacteria 2920822456 2920826144 731
277 iso_pu_bacteria 2582581865 2585386156 732
278 iso_pu_bacteria 8002285264 8002288601 734
279 iso_pu_bacteria 2643221636 2644200068 735
280 iso_pu_bacteria 2643221686 2644480439 735
281 3300003322 rootL2_10016804 rootL2_1001680427 737
282 iso_pu_bacteria 2582581308 2585281411 738
283 iso_pu_bacteria 2582581315 2585329239 738
284 iso_pu_bacteria 2585427527 2585535633 738
285 iso_pu_bacteria 2585427530 2585556006 738
286 iso_pu_bacteria 2615840626 2616310523 738
287 iso_pu_bacteria 2818991453 2819641646 738
288 iso_pu_bacteria 3005416602 3005422037 738
289 iso_pu_bacteria 2615840698 2616551999 739
290 iso_pu_bacteria 2617270742 2617382928 739
291 iso_pu_bacteria 2667528174 2671114491 739
292 iso_pu_bacteria 2775507266 2778175201 739
293 iso_pu_bacteria 2818991448 2819607626 739
294 iso_pu_bacteria 2838029111 2838032115 739
295 iso_pu_bacteria 2842475841 2842478847 739
296 iso_pu_bacteria 2842482326 2842486924 739
297 iso_pu_bacteria 2842502639 2842505834 739
298 iso_pu_bacteria 2919408235 2919413214 739
299 iso_pu_bacteria 8005314921 8005321318 739
300 iso_pu_bacteria 8005484373 8005489921 739
301 iso_pu_bacteria 8005645114 8005650805 739
302 iso_pu_bacteria 8005682033 8005684442 739
303 3300002704 JGI25155J39150_1000015 JGI25155J39150_1000015119 743
304 3300002705 JGI25156J39149_1000007 JGI25156J39149_1000007119 743
305 3300002738 JGI25154J39366_1000051 JGI25154J39366_100005153 743
306 3300002741 JGI25157J39369_1000012 JGI25157J39369_100001281 743
307 3300025206 Ga0209435_100006 Ga0209435_100006405 743
308 3300025246 Ga0209646_1000015 Ga0209646_1000015129 743
309 3300025250 Ga0209026_1000046 Ga0209026_1000046129 743
310 3300025256 Ga0209759_1000005 Ga0209759_1000005405 743

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00122

E1-E2_ATPase

E1-E2 ATPase

358

539

0.97

PF00403

HMA

Heavy-metal-associated domain

5

65

0.97

PF00403

HMA

Heavy-metal-associated domain

143

203

0.94

PF00702

Hydrolase

haloacid dehalogenase-like hydrolase

557

770

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
2voy-assembly1.cif.gz_F cryoem model of copa, the copper transporting atpase from archaeoglobus fulgidus 0.9785 228 334
1mwz-assembly1.cif.gz_A solution structure of the n-terminal domain of znta in the zn(ii)-form 0.9438 7 73
2qif-assembly1.cif.gz_A crystal structure of a metallochaperone with a tetranuclear cu(i) cluster 0.9413 6 72
2l3m-assembly1.cif.gz_A solution structure of the putative copper-ion-binding protein from bacillus anthracis str. ames 0.9327 2 72
1fvs-assembly1.cif.gz_A solution structure of the yeast copper transporter domain ccc2a in the apo and cu(i) load states 0.9214 6 74
ID Description Score Start End Superfamily
af_P9WPS7_255_365_2.70.150.10 Mainly Beta;Distorted Sandwich;Calcium-transporting ATPase, cytoplasmic transduction domain A;Calcium-transporting ATPase, cytoplasmic transduction domain A 0.9952 228 334 2.70.150.10
2hc8A00 Mainly Beta;Distorted Sandwich;Calcium-transporting ATPase, cytoplasmic transduction domain A;Calcium-transporting ATPase, cytoplasmic transduction domain A 0.9785 228 334 2.70.150.10
af_P9WPT3_132_249_2.70.150.10 Mainly Beta;Distorted Sandwich;Calcium-transporting ATPase, cytoplasmic transduction domain A;Calcium-transporting ATPase, cytoplasmic transduction domain A 0.9774 226 333 2.70.150.10
af_A0A1D8PEI4_603_716_2.70.150.10 Mainly Beta;Distorted Sandwich;Calcium-transporting ATPase, cytoplasmic transduction domain A;Calcium-transporting ATPase, cytoplasmic transduction domain A 0.976 227 333 2.70.150.10
af_O59666_301_417_2.70.150.10 Mainly Beta;Distorted Sandwich;Calcium-transporting ATPase, cytoplasmic transduction domain A;Calcium-transporting ATPase, cytoplasmic transduction domain A 0.9754 222 334 2.70.150.10
ID Description Score Start End GO Terms
AF-A0A432JR33-F1-model_v4 deleted 0.9677 248 329
AF-A0A3D1LC62-F1-model_v4 Heavy metal translocating P-type ATPase 0.948 236 317 GO:0005507
GO:0016020
GO:0043682
GO:0055070
AF-A0A2N6U9I2-F1-model_v4 deleted 0.9476 243 338
AF-A0A7K3CY93-F1-model_v4 Heavy metal translocating P-type ATPase 0.938 399 737 GO:0005507
GO:0005524
GO:0005886
GO:0012505
GO:0016887
GO:0043682
GO:0055070
AF-A0A521TT43-F1-model_v4 Mercuric transport protein MerT (Mercury ion transport protein) 0.9378 5 73 GO:0005886
GO:0015097
GO:0046872

Feature Viewer

pLDDT pTM Quality
78.53 0.71 High
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Predicted Structure (AlphaFold2)

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