F400487

General Info

Members Datasets Scaffolds Average Seq Length
310 207 620 432

Family's Representative Sequence

Representative Sequence 3300001979|JGI24740J21852_10020403|JGI24740J21852_100204032
Length 447
Sequence MASVKIADAFTQLLDGPAPLRVTAYDGSAAGPEDAPFGIDVKTERGLSYLMTAPGDLGLGRAYVAGDLDVSGVHPGDPYEALRELQVSLRMRRPSPAEAVRLVTGLGISHLKPPAPPAQEHLPRWRRTAEGLRHSRKRDSEAIHHHYDVSNTFYEYVLGPSMTYTCAVFPTEDATLEQAQFYKYDLVARKLDLQPGQRLLDLGCGWGGMVRHAAEHYGVKALGVTLSREQATWGQEKIKEMGLDHLAEVRHLDYREVDESGFDAISSIGLTEHIGVKNYPSYFSFIRDHLRPQGRLLNHCITRPHNKHQETGAFIDRYVFPDGELTGSGRIITEVQNVGLEVQHEENFRLHYAKTLAGWNRNLVENWDACVAEVGEGTARVWGLYIAGSRLGFERNDIQLHHVLATKTDPDGAMDYPLRPTFRWKRATRPRTDVRPGPGCSVATRRR

Samples

Sample ID Description Type Environment
1 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
4 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
21 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
29 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
41 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
42 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
43 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
44 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
47 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
48 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
49 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
50 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
51 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
52 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
53 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
54 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
60 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
61 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
62 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
63 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
69 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
70 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
71 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
72 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
73 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
74 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
75 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
113 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
114 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
115 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
116 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
117 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
118 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
119 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
120 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
121 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
122 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
123 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
124 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
125 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
126 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
127 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
128 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
129 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
130 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
131 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
132 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
133 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
134 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
135 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
136 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
137 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
138 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
139 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
140 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
141 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
142 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
143 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
144 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
145 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
146 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
147 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
148 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
149 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
150 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
151 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
152 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
153 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
154 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
155 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
156 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
157 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
158 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
159 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
160 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
161 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
162 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
163 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
164 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
169 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
170 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
171 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
172 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
173 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
174 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
175 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
176 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
177 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
178 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
179 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
181 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
182 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
183 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
184 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
185 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
186 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
187 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
188 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
189 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
190 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
191 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
192 2643221615 Nocardioides sp. Root224 Isolate Unclassified
193 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
194 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
195 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
196 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
197 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
198 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
199 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
200 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
201 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
202 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
203 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
204 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
205 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
206 2956939328 Lolliginicoccus suaedae LNNU 331112 Isolate Rhizosphere
207 3001119090 Lolliginicoccus lacisalsi G463 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.19
Metatranscriptomes 0.65
Isolates 5.16

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.87
Nodule 0
Rhizoplane 15.16
Rhizosphere 75.16
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10020403 3300001979 Bacteria 2312
2 JGI24735J21928_10020908 3300002067 Bacteria 2002
3 JGI24738J21930_10006456 3300002075 Bacteria 2750
4 JGI24744J21845_10008359 3300002077 Bacteria 2133
5 Ga0070658_10032860 3300005327 Bacteria 4172
6 Ga0070676_10059536 3300005328 Bacteria 2266
7 Ga0070683_100000705 3300005329 Bacteria 24278
8 Ga0070683_100039879 3300005329 Bacteria 4314
9 Ga0070683_100188376 3300005329 Bacteria 1959
10 Ga0070670_100054897 3300005331 Bacteria 3420
11 Ga0068869_100055579 3300005334 Bacteria 2885
12 Ga0070682_100011162 3300005337 Bacteria 5125
13 Ga0070682_100026156 3300005337 Bacteria 3490
14 Ga0070682_100027174 3300005337 Bacteria 3432
15 Ga0068868_100025137 3300005338 Bacteria 4524
16 Ga0070660_100013492 3300005339 Bacteria 5862
17 Ga0070660_100108859 3300005339 Bacteria 2203
18 Ga0070689_100011834 3300005340 Bacteria 6263
19 Ga0070661_100034483 3300005344 Bacteria 3669
20 Ga0070692_10036067 3300005345 Bacteria 2507
21 Ga0070675_100003799 3300005354 Bacteria 11471
22 Ga0070671_100017840 3300005355 Bacteria 5753
23 Ga0070659_100014043 3300005366 Bacteria 5977
24 Ga0070667_100014773 3300005367 Bacteria 6451
25 Ga0070713_100004180 3300005436 Bacteria 9631
26 Ga0070701_10038619 3300005438 Bacteria 2417
27 Ga0070678_100014317 3300005456 Bacteria 4999
28 Ga0068867_100017242 3300005459 Bacteria 5129
29 Ga0070685_10084833 3300005466 Bacteria 1906
30 Ga0070679_100011811 3300005530 Bacteria 8330
31 Ga0070684_100000520 3300005535 Bacteria 26402
32 Ga0070672_100019959 3300005543 Bacteria 4878
33 Ga0070686_100125512 3300005544 Bacteria 1768
34 Ga0070686_100141389 3300005544 Bacteria 1676
35 Ga0070693_100007543 3300005547 Bacteria 5320
36 Ga0070665_100038444 3300005548 Bacteria 4811
37 Ga0070665_100193150 3300005548 Bacteria 2036
38 Ga0068854_100168422 3300005578 Bacteria 1702
39 Ga0068856_100028253 3300005614 Bacteria 5476
40 Ga0068856_100032929 3300005614 Bacteria 5076
41 Ga0070702_100033448 3300005615 Bacteria 2827
42 Ga0070702_100055768 3300005615 Bacteria 2279
43 Ga0068852_100010411 3300005616 Bacteria 6949
44 Ga0068852_100083148 3300005616 Bacteria 2846
45 Ga0068852_100210605 3300005616 Bacteria 1844
46 Ga0068864_100009531 3300005618 Bacteria 8013
47 Ga0068870_10002744 3300005840 Bacteria 7392
48 Ga0068863_100003005 3300005841 Bacteria 16663
49 Ga0068858_100034652 3300005842 Bacteria 4683
50 Ga0068860_100045478 3300005843 Bacteria 4187
51 Ga0070717_10028172 3300006028 Bacteria 4494
52 Ga0075368_10053426 3300006042 Bacteria 1608
53 Ga0075363_100003383 3300006048 Bacteria 6778
54 Ga0075367_10018513 3300006178 Bacteria 3845
55 Ga0075370_10007515 3300006353 Bacteria 5554
56 Ga0075428_100166883 3300006844 Bacteria 2388
57 Ga0075431_100177830 3300006847 Bacteria 2185
58 Ga0075433_10030595 3300006852 Bacteria 4594
59 Ga0075434_100077655 3300006871 Bacteria 3315
60 Ga0068865_100122593 3300006881 Bacteria 1935
61 Ga0075436_100113557 3300006914 Bacteria 1891
62 Ga0075435_100003807 3300007076 Bacteria 10289
63 Ga0105240_10060634 3300009093 Bacteria 4716
64 Ga0105245_10003548 3300009098 Bacteria 13920
65 Ga0105245_10061913 3300009098 Bacteria 3375
66 Ga0105245_10067848 3300009098 Bacteria 3231
67 Ga0105245_10090928 3300009098 Bacteria 2808
68 Ga0105243_10000560 3300009148 Bacteria 37602
69 Ga0105243_10035219 3300009148 Bacteria 3880
70 Ga0105243_10187002 3300009148 Bacteria 1806
71 Ga0105243_10210005 3300009148 Bacteria 1713
72 Ga0105248_10086409 3300009177 Bacteria 3529
73 Ga0105248_10091175 3300009177 Bacteria 3432
74 Ga0105237_10161200 3300009545 Bacteria 2241
75 Ga0105238_10125716 3300009551 Bacteria 2543
76 Ga0105249_10021209 3300009553 Bacteria 5816
77 Ga0105249_10070483 3300009553 Bacteria 3227
78 Ga0105249_10070809 3300009553 Bacteria 3220
79 Ga0105239_10010783 3300010375 Bacteria 10208
80 Ga0105246_10001084 3300011119 Bacteria 15747
81 Ga0105246_10001782 3300011119 Bacteria 12873
82 Ga0105246_10051528 3300011119 Bacteria 2827
83 Ga0157373_10021632 3300013100 Bacteria 4668
84 Ga0157371_10058406 3300013102 Bacteria 2736
85 Ga0157374_10150648 3300013296 Bacteria 2261
86 Ga0163162_10007664 3300013306 Bacteria 10512
87 Ga0163162_10230049 3300013306 Bacteria 1984
88 Ga0157372_10000195 3300013307 Bacteria 66634
89 Ga0157372_10159996 3300013307 Bacteria 2602
90 Ga0163163_10081771 3300014325 Bacteria 3233
91 Ga0157380_10025154 3300014326 Bacteria 4512
92 Ga0157377_10011696 3300014745 Bacteria 4388
93 Ga0157377_10024258 3300014745 Bacteria 3222
94 Ga0157377_10089847 3300014745 Bacteria 1811
95 Ga0157379_10014451 3300014968 Bacteria 6928
96 Ga0157376_10033770 3300014969 Bacteria 4123
97 Ga0206351_10323208 3300020077 Bacteria 1732
98 Ga0213873_10000072 3300021358 Bacteria 21685
99 Ga0213875_10004176 3300021388 Bacteria 7992
100 Ga0224712_10007310 3300022467 Bacteria 3209
101 Ga0207688_10001720 3300025901 Bacteria 11613
102 Ga0207647_10011612 3300025904 Bacteria 6168
103 Ga0207647_10016960 3300025904 Bacteria 4958
104 Ga0207645_10004761 3300025907 Bacteria 9975
105 Ga0207643_10002987 3300025908 Bacteria 9116
106 Ga0207643_10007249 3300025908 Bacteria 5951
107 Ga0207705_10125196 3300025909 Bacteria 1909
108 Ga0207693_10066209 3300025915 Bacteria 2829
109 Ga0207662_10020410 3300025918 Bacteria 3781
110 Ga0207657_10009901 3300025919 Bacteria 9542
111 Ga0207657_10028668 3300025919 Bacteria 5074
112 Ga0207657_10056028 3300025919 Bacteria 3403
113 Ga0207652_10014910 3300025921 Bacteria 6302
114 Ga0207694_10063806 3300025924 Bacteria 2870
115 Ga0207650_10015651 3300025925 Bacteria 5287
116 Ga0207659_10031911 3300025926 Bacteria 3611
117 Ga0207687_10037131 3300025927 Bacteria 3322
118 Ga0207687_10045611 3300025927 Bacteria 3030
119 Ga0207687_10055210 3300025927 Bacteria 2783
120 Ga0207687_10195417 3300025927 Bacteria 1577
121 Ga0207700_10065259 3300025928 Bacteria 2777
122 Ga0207709_10000770 3300025935 Bacteria 25211
123 Ga0207709_10037759 3300025935 Bacteria 2872
124 Ga0207704_10126809 3300025938 Bacteria 1759
125 Ga0207691_10007959 3300025940 Bacteria 10198
126 Ga0207711_10052513 3300025941 Bacteria 3494
127 Ga0207689_10000715 3300025942 Bacteria 31759
128 Ga0207661_10003929 3300025944 Bacteria 10378
129 Ga0207661_10003948 3300025944 Bacteria 10358
130 Ga0207661_10034867 3300025944 Bacteria 3917
131 Ga0207661_10128647 3300025944 Bacteria 2166
132 Ga0207679_10030472 3300025945 Bacteria 3767
133 Ga0207651_10060889 3300025960 Bacteria 2623
134 Ga0207712_10115379 3300025961 Bacteria 2022
135 Ga0207640_10067973 3300025981 Bacteria 2386
136 Ga0207640_10115439 3300025981 Bacteria 1912
137 Ga0207658_10016434 3300025986 Bacteria 5090
138 Ga0207677_10034829 3300026023 Bacteria 3264
139 Ga0207677_10177266 3300026023 Bacteria 1673
140 Ga0207678_10002384 3300026067 Bacteria 17070
141 Ga0207708_10005977 3300026075 Bacteria 9013
142 Ga0207702_10003182 3300026078 Bacteria 15180
143 Ga0207702_10071941 3300026078 Bacteria 2979
144 Ga0207641_10348764 3300026088 Bacteria 1410
145 Ga0207648_10014735 3300026089 Bacteria 7214
146 Ga0207676_10002314 3300026095 Bacteria 13672
147 Ga0207674_10001564 3300026116 Bacteria 29469
148 Ga0207674_10045606 3300026116 Bacteria 4508
149 Ga0207675_100004039 3300026118 Bacteria 14213
150 Ga0207683_10006480 3300026121 Bacteria 10017
151 Ga0207698_10075333 3300026142 Bacteria 2696
152 Ga0268264_10000695 3300028381 Bacteria 39117
153 Ga0268264_10109525 3300028381 Bacteria 2416
154 Ga0307512_10078850 3300030522 Bacteria 2383
155 Ga0307410_10065364 3300031852 Bacteria 2502
156 Ga0307407_10049336 3300031903 Bacteria 2402
157 Ga0307407_10065554 3300031903 Bacteria 2139
158 Ga0395899_0061621 3300037312 Bacteria 2763
159 Ga0395900_0027655 3300037418 Bacteria 5810
160 Ga0395898_0021584 3300037466 Bacteria 6526
161 Ga0395898_0156880 3300037466 Bacteria 2177
162 Ga0436364_0798774 3300037853 Bacteria 16951
163 Ga0436365_1136159 3300039437 Bacteria 6086
164 Ga0436365_1901264 3300039437 Bacteria 6714
165 Ga0436362_1168909 3300039453 Bacteria 37124
166 Ga0451789_0409788 3300041443 Bacteria 2545
167 Ga0451793_0249530 3300041452 Bacteria 16851
168 Ga0451797_0641079 3300041453 Bacteria 5698
169 Ga0451839_0141997 3300041496 Bacteria 1631
170 Ga0451841_0961469 3300041498 Bacteria 4230
171 Ga0451843_1248576 3300041509 Bacteria 4371
172 Ga0466969_0025484 3300044656 Bacteria 3040
173 Ga0466972_0008855 3300044658 Bacteria 5051
174 Ga0466965_0016246 3300044683 Bacteria 3540
175 Ga0466966_0033872 3300044684 Bacteria 3306
176 Ga0466961_0065692 3300044693 Bacteria 2305
177 Ga0466961_0076668 3300044693 Bacteria 2118
178 Ga0466963_0000074 3300044694 Bacteria 35006
179 Ga0466963_0006187 3300044694 Bacteria 7067
180 Ga0466963_0064446 3300044694 Bacteria 2455
181 Ga0466963_0072760 3300044694 Bacteria 2316
182 Ga0466964_0039015 3300044706 Bacteria 1911
183 Ga0466971_0009266 3300044719 Bacteria 4301
184 Ga0466971_0023083 3300044719 Bacteria 2772
185 Ga0466968_0046199 3300044735 Bacteria 1850
186 Ga0466968_0054040 3300044735 Bacteria 1722
187 Ga0466970_0016707 3300044765 Bacteria 3787
188 Ga0466970_0084293 3300044765 Bacteria 1720
189 Ga0466957_0032389 3300044842 Bacteria 3129
190 Ga0466960_0009223 3300044901 Bacteria 4062
191 Ga0466960_0070720 3300044901 Bacteria 1736
192 Ga0466959_0006920 3300045049 Bacteria 7922
193 Ga0451576_0169931 3300045051 Bacteria 2276
194 Ga0466958_0009215 3300045836 Bacteria 5492
195 Ga0466958_0031500 3300045836 Bacteria 3152
196 Ga0466967_0000923 3300045976 Bacteria 15803
197 Ga0466967_0033155 3300045976 Bacteria 4370
198 Ga0466967_0080230 3300045976 Bacteria 2943
199 Ga0466967_0094112 3300045976 Bacteria 2727
200 Ga0466967_0102852 3300045976 Bacteria 2614
201 Ga0466967_0103967 3300045976 Bacteria 2599
202 Ga0466967_0128420 3300045976 Bacteria 2350
203 Ga0466967_0141437 3300045976 Bacteria 2241
204 Ga0466967_0186157 3300045976 Bacteria 1960
205 Ga0466967_0405531 3300045976 Bacteria 1327
206 Ga0495629_0075628 3300046459 Bacteria 2352
207 Ga0495662_0067260 3300046476 Bacteria 1734
208 Ga0495607_0031386 3300046501 Bacteria 3253
209 Ga0495608_0016319 3300046511 Bacteria 5138
210 Ga0495665_0048195 3300046531 Bacteria 2259
211 Ga0495674_0102501 3300047319 Bacteria 2434
212 Ga0495683_0005123 3300047323 Bacteria 7309
213 Ga0496101_0060191 3300048904 Bacteria 2755
214 Ga0496102_0073463 3300048905 Bacteria 3143
215 Ga0496102_0190486 3300048905 Bacteria 1932
216 Ga0496102_0193420 3300048905 Bacteria 1917
217 Ga0496103_0015555 3300048906 Bacteria 4531
218 Ga0496104_0002517 3300048907 Bacteria 15782
219 Ga0496104_0010061 3300048907 Bacteria 8441
220 Ga0496104_0048710 3300048907 Bacteria 3995
221 Ga0496104_0282124 3300048907 Bacteria 1574
222 Ga0496105_0003094 3300048908 Bacteria 12235
223 Ga0496105_0023247 3300048908 Bacteria 5026
224 Ga0496106_0043822 3300048909 Bacteria 3358
225 Ga0496106_0053024 3300048909 Bacteria 3062
226 Ga0496106_0074541 3300048909 Bacteria 2598
227 Ga0496106_0334749 3300048909 Bacteria 1215
228 Ga0496107_0023827 3300048910 Bacteria 4326
229 Ga0496107_0129853 3300048910 Bacteria 1860
230 Ga0496107_0215263 3300048910 Bacteria 1429
231 Ga0496108_0003843 3300048911 Bacteria 12049
232 Ga0496108_0009446 3300048911 Bacteria 7899
233 Ga0496108_0078142 3300048911 Bacteria 2800
234 Ga0496108_0136187 3300048911 Bacteria 2113
235 Ga0496109_0005273 3300048912 Bacteria 10798
236 Ga0496109_0015369 3300048912 Bacteria 6669
237 Ga0496109_0027187 3300048912 Bacteria 5106
238 Ga0496109_0055974 3300048912 Bacteria 3598
239 Ga0496109_0135848 3300048912 Bacteria 2297
240 Ga0496109_0279052 3300048912 Bacteria 1575
241 Ga0496109_0293290 3300048912 Bacteria 1533
242 Ga0496110_0000837 3300048913 Bacteria 21641
243 Ga0496110_0035132 3300048913 Bacteria 4346
244 Ga0496112_0455164 3300048915 Bacteria 1217
245 Ga0496113_0007416 3300048916 Bacteria 7056
246 Ga0496114_0009097 3300048917 Bacteria 7875
247 Ga0496114_0013178 3300048917 Bacteria 6627
248 Ga0496114_0016580 3300048917 Bacteria 5938
249 Ga0496114_0021018 3300048917 Bacteria 5303
250 Ga0496114_0024857 3300048917 Bacteria 4890
251 Ga0496114_0084855 3300048917 Bacteria 2682
252 Ga0496114_0210704 3300048917 Bacteria 1704
253 Ga0496114_0253643 3300048917 Bacteria 1548
254 Ga0496115_0033024 3300048918 Bacteria 4084
255 Ga0496115_0130576 3300048918 Bacteria 2070
256 Ga0496115_0163304 3300048918 Bacteria 1841
257 Ga0501031_0010157 3300049568 Bacteria 6134
258 Ga0501034_0009415 3300049571 Bacteria 10227
259 Ga0501034_0052343 3300049571 Bacteria 4113
260 Ga0501038_0009977 3300049574 Bacteria 8696
261 Ga0501046_0002365 3300049580 Bacteria 17744
262 Ga0501046_0116411 3300049580 Bacteria 2037
263 Ga0501067_0000532 3300049583 Bacteria 20747
264 Ga0501067_0016616 3300049583 Bacteria 4066
265 Ga0501068_0005844 3300049584 Bacteria 6749
266 Ga0501070_0016760 3300049586 Bacteria 6151
267 Ga0501070_0030459 3300049586 Bacteria 4522
268 Ga0501070_0098956 3300049586 Bacteria 2412
269 Ga0501071_0002274 3300049587 Bacteria 11567
270 Ga0501072_0101463 3300049588 Bacteria 2287
271 Ga0501073_0032041 3300049589 Bacteria 3749
272 Ga0501074_0010660 3300049590 Bacteria 6672
273 Ga0501074_0036753 3300049590 Bacteria 3547
274 Ga0501077_0038543 3300049593 Bacteria 3043
275 Ga0501079_0152939 3300049741 Bacteria 1798
276 Ga0501080_0010887 3300049742 Bacteria 8323
277 Ga0501080_0014957 3300049742 Bacteria 7144
278 Ga0501083_0014861 3300049744 Bacteria 5443
279 Ga0501035_0084393 3300049822 Bacteria 2801
280 Ga0501044_0025843 3300049823 Bacteria 6224
281 nmdc:mga00v17_43921_c1 3300050491 Bacteria 2693
282 nmdc:mga00v17_53737_c1 3300050491 Bacteria 2456
283 nmdc:mga0yw44_37110_c1 3300050492 Bacteria 2876
284 nmdc:mga0yw44_7351_c1 3300050492 Bacteria 5411
285 nmdc:mga0yw44_86922_c1 3300050492 Bacteria 1706
286 nmdc:mga06z11_32049_c1 3300050494 Bacteria 2560
287 nmdc:mga07m45_9929_c1 3300050496 Bacteria 4953
288 nmdc:mga05p37_193939_c1 3300050507 Bacteria 2464
289 nmdc:mga08y16_95543_c1 3300050511 Bacteria 3096
290 nmdc:mga0rr50_26034_c1 3300050513 Bacteria 4075
291 nmdc:mga0a205_18503_c1 3300050515 Bacteria 6552
292 Ga0500644_0000053 3300053088 Bacteria 69275
293 Ga0501082_0012069 3300060353 Bacteria 7425
294 Ga0466962_0001008 3300061719 Bacteria 12860
295 2644090184 2643221615 Bacteria 5487866
296 2644320028 2643221657 Bacteria 5490246
297 2739206246 2738543005 Bacteria 5278128
298 2739239141 2738543011 Bacteria 5731169
299 2739362696 2738543034 Bacteria 6084756
300 2774397101 2773857762 Bacteria 5971770
301 2791910435 2791354901 Bacteria 8322202
302 2809198747 2808606439 Bacteria 5952208
303 2812352682 2811994878 Bacteria 5992952
304 2816427415 2816332119 Bacteria 8120218
305 2889304095 2889300758 Bacteria 5690814
306 2891969782 2891968417 Bacteria 5821697
307 2928147213 2928142448 Bacteria 5288925
308 2939745511 2939743619 Bacteria 5762299
309 2956940756 2956939328 Bacteria 3474458
310 3001120438 3001119090 Bacteria 3449530
311 JGI24740J21852_10020403
312 JGI24735J21928_10020908
313 JGI24738J21930_10006456
314 JGI24744J21845_10008359
315 Ga0070658_10032860
316 Ga0070676_10059536
317 Ga0070683_100000705
318 Ga0070683_100039879
319 Ga0070683_100188376
320 Ga0070670_100054897
321 Ga0068869_100055579
322 Ga0070682_100011162
323 Ga0070682_100026156
324 Ga0070682_100027174
325 Ga0068868_100025137
326 Ga0070660_100013492
327 Ga0070660_100108859
328 Ga0070689_100011834
329 Ga0070661_100034483
330 Ga0070692_10036067
331 Ga0070675_100003799
332 Ga0070671_100017840
333 Ga0070659_100014043
334 Ga0070667_100014773
335 Ga0070713_100004180
336 Ga0070701_10038619
337 Ga0070678_100014317
338 Ga0068867_100017242
339 Ga0070685_10084833
340 Ga0070679_100011811
341 Ga0070684_100000520
342 Ga0070672_100019959
343 Ga0070686_100125512
344 Ga0070686_100141389
345 Ga0070693_100007543
346 Ga0070665_100038444
347 Ga0070665_100193150
348 Ga0068854_100168422
349 Ga0068856_100028253
350 Ga0068856_100032929
351 Ga0070702_100033448
352 Ga0070702_100055768
353 Ga0068852_100010411
354 Ga0068852_100083148
355 Ga0068852_100210605
356 Ga0068864_100009531
357 Ga0068870_10002744
358 Ga0068863_100003005
359 Ga0068858_100034652
360 Ga0068860_100045478
361 Ga0070717_10028172
362 Ga0075368_10053426
363 Ga0075363_100003383
364 Ga0075367_10018513
365 Ga0075370_10007515
366 Ga0075428_100166883
367 Ga0075431_100177830
368 Ga0075433_10030595
369 Ga0075434_100077655
370 Ga0068865_100122593
371 Ga0075436_100113557
372 Ga0075435_100003807
373 Ga0105240_10060634
374 Ga0105245_10003548
375 Ga0105245_10061913
376 Ga0105245_10067848
377 Ga0105245_10090928
378 Ga0105243_10000560
379 Ga0105243_10035219
380 Ga0105243_10187002
381 Ga0105243_10210005
382 Ga0105248_10086409
383 Ga0105248_10091175
384 Ga0105237_10161200
385 Ga0105238_10125716
386 Ga0105249_10021209
387 Ga0105249_10070483
388 Ga0105249_10070809
389 Ga0105239_10010783
390 Ga0105246_10001084
391 Ga0105246_10001782
392 Ga0105246_10051528
393 Ga0157373_10021632
394 Ga0157371_10058406
395 Ga0157374_10150648
396 Ga0163162_10007664
397 Ga0163162_10230049
398 Ga0157372_10000195
399 Ga0157372_10159996
400 Ga0163163_10081771
401 Ga0157380_10025154
402 Ga0157377_10011696
403 Ga0157377_10024258
404 Ga0157377_10089847
405 Ga0157379_10014451
406 Ga0157376_10033770
407 Ga0206351_10323208
408 Ga0213873_10000072
409 Ga0213875_10004176
410 Ga0224712_10007310
411 Ga0207688_10001720
412 Ga0207647_10011612
413 Ga0207647_10016960
414 Ga0207645_10004761
415 Ga0207643_10002987
416 Ga0207643_10007249
417 Ga0207705_10125196
418 Ga0207693_10066209
419 Ga0207662_10020410
420 Ga0207657_10009901
421 Ga0207657_10028668
422 Ga0207657_10056028
423 Ga0207652_10014910
424 Ga0207694_10063806
425 Ga0207650_10015651
426 Ga0207659_10031911
427 Ga0207687_10037131
428 Ga0207687_10045611
429 Ga0207687_10055210
430 Ga0207687_10195417
431 Ga0207700_10065259
432 Ga0207709_10000770
433 Ga0207709_10037759
434 Ga0207704_10126809
435 Ga0207691_10007959
436 Ga0207711_10052513
437 Ga0207689_10000715
438 Ga0207661_10003929
439 Ga0207661_10003948
440 Ga0207661_10034867
441 Ga0207661_10128647
442 Ga0207679_10030472
443 Ga0207651_10060889
444 Ga0207712_10115379
445 Ga0207640_10067973
446 Ga0207640_10115439
447 Ga0207658_10016434
448 Ga0207677_10034829
449 Ga0207677_10177266
450 Ga0207678_10002384
451 Ga0207708_10005977
452 Ga0207702_10003182
453 Ga0207702_10071941
454 Ga0207641_10348764
455 Ga0207648_10014735
456 Ga0207676_10002314
457 Ga0207674_10001564
458 Ga0207674_10045606
459 Ga0207675_100004039
460 Ga0207683_10006480
461 Ga0207698_10075333
462 Ga0268264_10000695
463 Ga0268264_10109525
464 Ga0307512_10078850
465 Ga0307410_10065364
466 Ga0307407_10049336
467 Ga0307407_10065554
468 Ga0395899_0061621
469 Ga0395900_0027655
470 Ga0395898_0021584
471 Ga0395898_0156880
472 Ga0436364_0798774
473 Ga0436365_1136159
474 Ga0436365_1901264
475 Ga0436362_1168909
476 Ga0451789_0409788
477 Ga0451793_0249530
478 Ga0451797_0641079
479 Ga0451839_0141997
480 Ga0451841_0961469
481 Ga0451843_1248576
482 Ga0466969_0025484
483 Ga0466972_0008855
484 Ga0466965_0016246
485 Ga0466966_0033872
486 Ga0466961_0065692
487 Ga0466961_0076668
488 Ga0466963_0000074
489 Ga0466963_0006187
490 Ga0466963_0064446
491 Ga0466963_0072760
492 Ga0466964_0039015
493 Ga0466971_0009266
494 Ga0466971_0023083
495 Ga0466968_0046199
496 Ga0466968_0054040
497 Ga0466970_0016707
498 Ga0466970_0084293
499 Ga0466957_0032389
500 Ga0466960_0009223
501 Ga0466960_0070720
502 Ga0466959_0006920
503 Ga0451576_0169931
504 Ga0466958_0009215
505 Ga0466958_0031500
506 Ga0466967_0000923
507 Ga0466967_0033155
508 Ga0466967_0080230
509 Ga0466967_0094112
510 Ga0466967_0102852
511 Ga0466967_0103967
512 Ga0466967_0128420
513 Ga0466967_0141437
514 Ga0466967_0186157
515 Ga0466967_0405531
516 Ga0495629_0075628
517 Ga0495662_0067260
518 Ga0495607_0031386
519 Ga0495608_0016319
520 Ga0495665_0048195
521 Ga0495674_0102501
522 Ga0495683_0005123
523 Ga0496101_0060191
524 Ga0496102_0073463
525 Ga0496102_0190486
526 Ga0496102_0193420
527 Ga0496103_0015555
528 Ga0496104_0002517
529 Ga0496104_0010061
530 Ga0496104_0048710
531 Ga0496104_0282124
532 Ga0496105_0003094
533 Ga0496105_0023247
534 Ga0496106_0043822
535 Ga0496106_0053024
536 Ga0496106_0074541
537 Ga0496106_0334749
538 Ga0496107_0023827
539 Ga0496107_0129853
540 Ga0496107_0215263
541 Ga0496108_0003843
542 Ga0496108_0009446
543 Ga0496108_0078142
544 Ga0496108_0136187
545 Ga0496109_0005273
546 Ga0496109_0015369
547 Ga0496109_0027187
548 Ga0496109_0055974
549 Ga0496109_0135848
550 Ga0496109_0279052
551 Ga0496109_0293290
552 Ga0496110_0000837
553 Ga0496110_0035132
554 Ga0496112_0455164
555 Ga0496113_0007416
556 Ga0496114_0009097
557 Ga0496114_0013178
558 Ga0496114_0016580
559 Ga0496114_0021018
560 Ga0496114_0024857
561 Ga0496114_0084855
562 Ga0496114_0210704
563 Ga0496114_0253643
564 Ga0496115_0033024
565 Ga0496115_0130576
566 Ga0496115_0163304
567 Ga0501031_0010157
568 Ga0501034_0009415
569 Ga0501034_0052343
570 Ga0501038_0009977
571 Ga0501046_0002365
572 Ga0501046_0116411
573 Ga0501067_0000532
574 Ga0501067_0016616
575 Ga0501068_0005844
576 Ga0501070_0016760
577 Ga0501070_0030459
578 Ga0501070_0098956
579 Ga0501071_0002274
580 Ga0501072_0101463
581 Ga0501073_0032041
582 Ga0501074_0010660
583 Ga0501074_0036753
584 Ga0501077_0038543
585 Ga0501079_0152939
586 Ga0501080_0010887
587 Ga0501080_0014957
588 Ga0501083_0014861
589 Ga0501035_0084393
590 Ga0501044_0025843
591 nmdc:mga00v17_43921_c1
592 nmdc:mga00v17_53737_c1
593 nmdc:mga0yw44_37110_c1
594 nmdc:mga0yw44_7351_c1
595 nmdc:mga0yw44_86922_c1
596 nmdc:mga06z11_32049_c1
597 nmdc:mga07m45_9929_c1
598 nmdc:mga05p37_193939_c1
599 nmdc:mga08y16_95543_c1
600 nmdc:mga0rr50_26034_c1
601 nmdc:mga0a205_18503_c1
602 Ga0500644_0000053
603 Ga0501082_0012069
604 Ga0466962_0001008
605 2644090184
606 2644320028
607 2739206246
608 2739239141
609 2739362696
610 2774397101
611 2791910435
612 2809198747
613 2812352682
614 2816427415
615 2889304095
616 2891969782
617 2928147213
618 2939745511
619 2956940756
620 3001120438

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02353

CMAS

Mycolic acid cyclopropane synthetase

134

403

0.98

PF13649

Methyltransf_25

Methyltransferase domain

199

294

0.95

PF08242

Methyltransf_12

Methyltransferase domain

200

296

0.94

PF08241

Methyltransf_11

Methyltransferase domain

200

298

0.93

PF13489

Methyltransf_23

Methyltransferase domain

176

362

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
1tpy-assembly1.cif.gz_A structure of the cyclopropane synthase mmaa2 from mycobacterium tuberculosis 0.9453 140 407
3hem-assembly1.cif.gz_A structure of mycobacterium tuberculosis mycolic acid cyclopropane synthase cmaa2 in complex with dioctylamine 0.945 140 407
1l1e-assembly2.cif.gz_B crystal structure of mycolic acid cyclopropane synthase pcaa complexed with s-adenosyl-l-homocysteine 0.9355 147 405
8t1a-assembly1.cif.gz_A crystal structure of s-adenosylmethionine-dependent methyltransferase umaa from mycobacterium tuberculosis (p32 twin) 0.9311 147 407
8t1a-assembly2.cif.gz_B crystal structure of s-adenosylmethionine-dependent methyltransferase umaa from mycobacterium tuberculosis (p32 twin) 0.9289 149 407
ID Description Score Start End Superfamily
af_O69687_132_410_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9837 131 407 3.40.50.150
af_O69687_132_410_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9733 131 407 3.40.50.150
af_Q5APD4_189_477_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9516 134 405 3.40.50.150
3hemA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.945 140 407 3.40.50.150
af_Q2QUD2_542_827_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9443 132 405 3.40.50.150
ID Description Score Start End GO Terms
AF-R4MBT5-F1-model_v4 Cyclopropane-fatty-acyl-phospholipid synthase 0.9724 6 411
AF-A0A323V5Q6-F1-model_v4 SAM-dependent methyltransferase 0.9652 114 419 GO:0008168
GO:0008610
GO:0032259
AF-A0A158KWH3-F1-model_v4 Cyclopropane-fatty-acyl-phospholipid synthase 0.9647 163 369 GO:0008168
GO:0008610
GO:0032259
AF-A0A436HFD4-F1-model_v4 deleted 0.9554 163 422
AF-A0A133Z3B4-F1-model_v4 deleted 0.95 4 419

Map