F399135

General Info

Members Datasets Scaffolds Average Seq Length
307 172 307 663

Family's Representative Sequence

Representative Sequence 3300006186|Ga0075369_10001352|Ga0075369_100013523
Length 703
Sequence MNEKPNGPKPKPRAAAKPKRTPQGGQGGDGQKRGGKPAANGNGKSTNGLSIAQSTVSRGAAVRAQKRSQADAQRVANQYLSASNVAAPRERRANFIDDSPRLKVIGLGGMDGGGSKNTILVEYMNDAVIMDCGNDLGVDLPGINYGIADMSYLESIKHKLRAYIITHGHLDHIGGLPHIVPKFPAPIYGSKFTIGRVEEIFENFGLPMPEGFELKTVVMNENTHERLKIGEFYTELVRITHSIPGSTCIVLDTPVGRLINTGDFRLDPNPLDHERSDIDRLKELGDEGVLALLSECTTPERLGRTPSESTIEQSFVDIMDRAPGRIFVAIFSTNINRIQMIINAAVHHNKKIALDGRSMMSTLEMAVRHGFVKVPKGTFVPIASVPTLKDNEVVVVCTGGQGEPSSALQRMASGEHRHVKMKEQDTVILSSTPIPETGNDALIGTMIDELMRKGVHVFNHVNHELQGVGPLHVSGHASRDEYADMINFTRPRFFIPIYGAFRSKQSHIELAVELGIPRKDTVNAENGDIIALTPDKIEIEGNVPHGTILVDQTGAIVSNVVVKDRVLLSEEGLVAVVLTVDKRSGSLLTSPDIISRGFIYMRDNEELMNGLRHELRRAVQQRFKRIDLDRFKAELKDHVTHYLFDKTQRSPIVIPVVNVIGGKVEAKTVHQNKTKNAEEIAREQEKRFQQMRERLLSQDARVD

Samples

Sample ID Description Type Environment
1 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300002244 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 Metagenome Rhizosphere
6 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
7 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
8 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
9 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
10 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
11 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
12 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
13 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
14 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
15 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
16 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
17 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
18 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
19 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
20 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
21 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
22 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
23 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
24 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
25 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
26 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
27 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
28 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
29 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
30 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
31 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
32 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
33 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
34 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
35 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
38 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
39 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
40 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
41 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
42 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
43 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
44 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
45 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
46 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
47 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
48 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
49 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
50 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
51 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
53 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
54 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
55 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
56 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
57 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
58 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
59 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
60 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
61 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
62 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
63 3300009986 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_92 metaG Metagenome Rhizosphere
64 3300009993 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG Metagenome Rhizosphere
65 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
66 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
67 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
68 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
69 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
70 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
71 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
72 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
73 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
74 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
75 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
76 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
105 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
108 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
109 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
110 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
111 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
112 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
113 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
114 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
115 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
116 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
117 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
118 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
119 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
120 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
121 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
122 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
123 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
124 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
125 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
137 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
138 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
139 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
140 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
142 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
143 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
144 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
145 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
146 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
147 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
148 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
149 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
150 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
151 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
152 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
153 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
154 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
155 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
156 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
157 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
158 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
159 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
160 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
161 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
162 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
163 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
164 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
165 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
166 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
167 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
168 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
169 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
170 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
171 3300053722 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 endosphere Metagenome Endosphere
172 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 21.17
Nodule 0
Rhizoplane 0
Rhizosphere 77.52
Stem 0
Stem Tuber 0
Unclassified 1.3

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1003129 3300001915 Unclassified 4055
2 JGI24740J21852_10008226 3300001979 Unclassified 4175
3 JGI24737J22298_10000346 3300001990 Bacteria 15562
4 JGI24735J21928_10000055 3300002067 Bacteria 48760
5 JGI24742J22300_10000020 3300002244 Bacteria 26144
6 rootH1_10003685 3300003316 Bacteria 49635
7 rootH1_10003685 3300003323 Bacteria 21096
8 rootH2_10000311 3300003320 Bacteria 277677
9 rootH1_10039313 3300003323 Bacteria 4822
10 Ga0065704_10090028 3300005289 Bacteria 2816
11 Ga0070658_10000054 3300005327 Bacteria 115356
12 Ga0070658_10000076 3300005327 Bacteria 95016
13 Ga0070658_10000097 3300005327 Bacteria 77127
14 Ga0070658_10001475 3300005327 Bacteria 19996
15 Ga0070658_10001788 3300005327 Bacteria 18073
16 Ga0070658_10001966 3300005327 Bacteria 17286
17 Ga0070658_10008093 3300005327 Bacteria 8456
18 Ga0070658_10072111 3300005327 Bacteria 2830
19 Ga0070676_10000741 3300005328 Bacteria 16030
20 Ga0070676_10011642 3300005328 Bacteria 4785
21 Ga0070683_100000239 3300005329 Bacteria 37590
22 Ga0070683_100000380 3300005329 Bacteria 30907
23 Ga0070690_100011684 3300005330 Bacteria 5143
24 Ga0070670_100003558 3300005331 Bacteria 12961
25 Ga0070666_10013763 3300005335 Bacteria 5138
26 Ga0070680_100000241 3300005336 Bacteria 36226
27 Ga0070680_100023167 3300005336 Bacteria 4950
28 Ga0070682_100008418 3300005337 Bacteria 5818
29 Ga0070660_100000158 3300005339 Bacteria 44096
30 Ga0070660_100000226 3300005339 Bacteria 37370
31 Ga0070660_100000979 3300005339 Bacteria 19111
32 Ga0070691_10007208 3300005341 Bacteria 5091
33 Ga0070661_100021164 3300005344 Bacteria 4642
34 Ga0070692_10016481 3300005345 Unclassified 3515
35 Ga0070671_100000001 3300005355 Bacteria 1228151
36 Ga0070674_100003287 3300005356 Bacteria 9045
37 Ga0070673_100000079 3300005364 Bacteria 41513
38 Ga0070673_100003154 3300005364 Bacteria 10216
39 Ga0070659_100000287 3300005366 Bacteria 39394
40 Ga0070659_100001474 3300005366 Bacteria 16940
41 Ga0070667_100000001 3300005367 Bacteria 1108638
42 Ga0070667_100000503 3300005367 Bacteria 39598
43 Ga0070667_100013150 3300005367 Bacteria 6841
44 Ga0070714_100000277 3300005435 Bacteria 39221
45 Ga0070681_10002091 3300005458 Bacteria 18140
46 Ga0070681_10018146 3300005458 Bacteria 7036
47 Ga0070685_10000177 3300005466 Bacteria 42536
48 Ga0070685_10000251 3300005466 Bacteria 35059
49 Ga0070685_10006523 3300005466 Bacteria 5951
50 Ga0070685_10007371 3300005466 Bacteria 5626
51 Ga0070679_100000332 3300005530 Bacteria 40130
52 Ga0070679_100000499 3300005530 Bacteria 33449
53 Ga0070679_100004467 3300005530 Bacteria 12923
54 Ga0070679_100010671 3300005530 Bacteria 8717
55 Ga0070679_100019194 3300005530 Bacteria 6645
56 Ga0070684_100008578 3300005535 Bacteria 8004
57 Ga0070672_100010015 3300005543 Bacteria 6559
58 Ga0070686_100024276 3300005544 Bacteria 3632
59 Ga0070665_100024889 3300005548 Bacteria 6032
60 Ga0068855_100000001 3300005563 Bacteria 818777
61 Ga0068855_100011869 3300005563 Bacteria 10535
62 Ga0068855_100016309 3300005563 Bacteria 8936
63 Ga0068857_100000001 3300005577 Bacteria 254081
64 Ga0068857_100000012 3300005577 Bacteria 106243
65 Ga0068857_100000266 3300005577 Bacteria 35450
66 Ga0068857_100001306 3300005577 Bacteria 19580
67 Ga0068857_100048667 3300005577 Unclassified 3763
68 Ga0068856_100000002 3300005614 Bacteria 372816
69 Ga0068856_100002238 3300005614 Bacteria 19969
70 Ga0068856_100004704 3300005614 Bacteria 13553
71 Ga0068856_100017216 3300005614 Bacteria 7004
72 Ga0068861_100088540 3300005719 Unclassified 2438
73 Ga0068858_100012836 3300005842 Bacteria 7899
74 Ga0068860_100009562 3300005843 Bacteria 9630
75 Ga0068860_100012760 3300005843 Bacteria 8261
76 Ga0081455_10000020 3300005937 Bacteria 172997
77 Ga0081539_10004105 3300005985 Bacteria 16612
78 Ga0075365_10000002 3300006038 Bacteria 226306
79 Ga0075365_10000007 3300006038 Bacteria 116889
80 Ga0075365_10050842 3300006038 Bacteria 2735
81 Ga0075368_10000026 3300006042 Bacteria 35367
82 Ga0075363_100001027 3300006048 Bacteria 10022
83 Ga0075364_10001105 3300006051 Bacteria 14429
84 Ga0075364_10013323 3300006051 Bacteria 5050
85 Ga0075364_10030901 3300006051 Unclassified 3440
86 Ga0075364_10037162 3300006051 Unclassified 3151
87 Ga0075362_10000084 3300006177 Bacteria 25989
88 Ga0075367_10000017 3300006178 Bacteria 34198
89 Ga0075369_10000004 3300006186 Bacteria 154675
90 Ga0075369_10001352 3300006186 Bacteria 8327
91 Ga0075366_10000003 3300006195 Bacteria 114017
92 Ga0075366_10000010 3300006195 Bacteria 81131
93 Ga0075366_10000030 3300006195 Bacteria 49629
94 Ga0075366_10000064 3300006195 Bacteria 39771
95 Ga0097621_100000002 3300006237 Bacteria 172240
96 Ga0097621_100000052 3300006237 Bacteria 60152
97 Ga0075370_10000671 3300006353 Bacteria 13362
98 Ga0068871_100000006 3300006358 Bacteria 116822
99 Ga0068871_100000090 3300006358 Bacteria 52749
100 Ga0075428_100003732 3300006844 Bacteria 16706
101 Ga0075428_100004910 3300006844 Bacteria 14854
102 Ga0105240_10000003 3300009093 Bacteria 1183681
103 Ga0105245_10000001 3300009098 Bacteria 939270
104 Ga0105245_10000002 3300009098 Bacteria 634374
105 Ga0105245_10000096 3300009098 Bacteria 84679
106 Ga0105245_10000127 3300009098 Bacteria 72844
107 Ga0105245_10142352 3300009098 Bacteria 2260
108 Ga0105243_10000001 3300009148 Bacteria 1156578
109 Ga0105243_10005385 3300009148 Bacteria 9986
110 Ga0105241_10000009 3300009174 Bacteria 258876
111 Ga0105241_10001553 3300009174 Bacteria 17582
112 Ga0105242_10000001 3300009176 Bacteria 574039
113 Ga0105248_10022205 3300009177 Bacteria 7036
114 Ga0105238_10047367 3300009551 Bacteria 4335
115 Ga0105249_10000744 3300009553 Bacteria 29317
116 Ga0105033_100056 3300009986 Bacteria 8483
117 Ga0105028_100150 3300009993 Bacteria 7506
118 Ga0105239_10011454 3300010375 Bacteria 9890
119 Ga0105239_10027465 3300010375 Bacteria 6265
120 Ga0157373_10000092 3300013100 Bacteria 74657
121 Ga0157373_10027488 3300013100 Unclassified 4104
122 Ga0157371_10000207 3300013102 Bacteria 86226
123 Ga0157370_10021155 3300013104 Bacteria 6487
124 Ga0157369_10000003 3300013105 Bacteria 507337
125 Ga0157369_10000227 3300013105 Bacteria 77626
126 Ga0157369_10026169 3300013105 Bacteria 6473
127 Ga0157374_10000014 3300013296 Bacteria 396846
128 Ga0157374_10000018 3300013296 Bacteria 286683
129 Ga0157374_10000598 3300013296 Bacteria 31965
130 Ga0157374_10001610 3300013296 Bacteria 18924
131 Ga0157374_10002774 3300013296 Bacteria 14708
132 Ga0157374_10002998 3300013296 Bacteria 14128
133 Ga0157374_10005788 3300013296 Bacteria 10440
134 Ga0157374_10040797 3300013296 Bacteria 4276
135 Ga0157374_10064918 3300013296 Bacteria 3427
136 Ga0157378_10002528 3300013297 Bacteria 16274
137 Ga0157372_10000137 3300013307 Bacteria 80896
138 Ga0157372_10000774 3300013307 Bacteria 34598
139 Ga0157372_10087846 3300013307 Unclassified 3529
140 Ga0163163_10020552 3300014325 Bacteria 6220
141 Ga0157377_10003618 3300014745 Bacteria 7001
142 Ga0157377_10005173 3300014745 Bacteria 6102
143 Ga0157376_10000001 3300014969 Bacteria 842910
144 Ga0207647_10000087 3300025904 Bacteria 70424
145 Ga0207645_10012972 3300025907 Bacteria 5634
146 Ga0207705_10000019 3300025909 Bacteria 317770
147 Ga0207705_10000057 3300025909 Bacteria 157369
148 Ga0207705_10000161 3300025909 Bacteria 72047
149 Ga0207705_10001771 3300025909 Bacteria 17051
150 Ga0207705_10002362 3300025909 Bacteria 14589
151 Ga0207705_10002571 3300025909 Bacteria 13949
152 Ga0207705_10006724 3300025909 Bacteria 8499
153 Ga0207705_10014564 3300025909 Bacteria 5658
154 Ga0207654_10000002 3300025911 Bacteria 1460142
155 Ga0207654_10004515 3300025911 Bacteria 7029
156 Ga0207695_10000005 3300025913 Bacteria 1196715
157 Ga0207695_10046955 3300025913 Bacteria 4573
158 Ga0207660_10000180 3300025917 Bacteria 40305
159 Ga0207660_10007723 3300025917 Bacteria 6962
160 Ga0207660_10058247 3300025917 Unclassified 2769
161 Ga0207657_10000226 3300025919 Bacteria 59005
162 Ga0207657_10000502 3300025919 Bacteria 41290
163 Ga0207657_10000997 3300025919 Bacteria 30085
164 Ga0207652_10002428 3300025921 Bacteria 15728
165 Ga0207694_10003882 3300025924 Bacteria 11818
166 Ga0207650_10007301 3300025925 Bacteria 7526
167 Ga0207687_10000001 3300025927 Bacteria 1130810
168 Ga0207687_10000004 3300025927 Bacteria 841177
169 Ga0207687_10000008 3300025927 Bacteria 497738
170 Ga0207687_10000107 3300025927 Bacteria 60194
171 Ga0207687_10088225 3300025927 Bacteria 2256
172 Ga0207664_10000812 3300025929 Bacteria 21191
173 Ga0207644_10000001 3300025931 Bacteria 1243214
174 Ga0207690_10000566 3300025932 Bacteria 24162
175 Ga0207686_10000001 3300025934 Bacteria 1169580
176 Ga0207709_10000002 3300025935 Bacteria 1171536
177 Ga0207709_10006851 3300025935 Bacteria 6378
178 Ga0207669_10010199 3300025937 Bacteria 4514
179 Ga0207691_10046945 3300025940 Bacteria 3966
180 Ga0207661_10004800 3300025944 Bacteria 9464
181 Ga0207661_10079125 3300025944 Unclassified 2709
182 Ga0207667_10000003 3300025949 Bacteria 822935
183 Ga0207667_10000278 3300025949 Bacteria 70630
184 Ga0207667_10004009 3300025949 Bacteria 18097
185 Ga0207667_10014700 3300025949 Bacteria 8908
186 Ga0207667_10118723 3300025949 Bacteria 2725
187 Ga0207651_10000188 3300025960 Bacteria 27021
188 Ga0207651_10001657 3300025960 Bacteria 10221
189 Ga0207712_10000830 3300025961 Bacteria 22660
190 Ga0207658_10000003 3300025986 Bacteria 1151934
191 Ga0207703_10008920 3300026035 Bacteria 7899
192 Ga0207639_10013058 3300026041 Bacteria 5799
193 Ga0207702_10000001 3300026078 Bacteria 895738
194 Ga0207702_10001968 3300026078 Bacteria 19973
195 Ga0207702_10024889 3300026078 Bacteria 4967
196 Ga0207674_10000015 3300026116 Bacteria 183445
197 Ga0207674_10000021 3300026116 Bacteria 161986
198 Ga0207674_10002189 3300026116 Bacteria 24731
199 Ga0207674_10061755 3300026116 Unclassified 3785
200 Ga0207683_10011417 3300026121 Bacteria 7578
201 Ga0209813_10000003 3300027866 Bacteria 207060
202 Ga0268266_10013003 3300028379 Bacteria 7176
203 Ga0268266_10026974 3300028379 Bacteria 4887
204 Ga0268264_10012019 3300028381 Bacteria 7127
205 Ga0265334_10004340 3300028573 Bacteria 6309
206 Ga0265322_10012634 3300028654 Unclassified 2444
207 Ga0265338_10006564 3300028800 Bacteria 14767
208 Ga0265338_10015686 3300028800 Bacteria 8301
209 Ga0265338_10023457 3300028800 Bacteria 6342
210 Ga0265324_10012620 3300029957 Unclassified 3180
211 Ga0265339_10016253 3300031249 Bacteria 4441
212 Ga0265327_10000025 3300031251 Bacteria 380054
213 Ga0265327_10000260 3300031251 Bacteria 104663
214 Ga0265316_10036395 3300031344 Unclassified 3980
215 Ga0395899_0029243 3300037312 Bacteria 4145
216 Ga0395899_0056105 3300037312 Bacteria 2912
217 Ga0395900_0005511 3300037418 Bacteria 13247
218 Ga0395900_0041155 3300037418 Unclassified 4764
219 Ga0395900_0088770 3300037418 Bacteria 3178
220 Ga0395900_0129262 3300037418 Unclassified 2589
221 Ga0395898_0012030 3300037466 Bacteria 8958
222 Ga0395898_0026090 3300037466 Bacteria 5883
223 Ga0395905_0000604 3300037471 Bacteria 48071
224 Ga0395905_0019335 3300037471 Bacteria 6459
225 Ga0395905_0079088 3300037471 Bacteria 3082
226 Ga0395901_0026267 3300038443 Bacteria 5978
227 Ga0395901_0085423 3300038443 Unclassified 3299
228 Ga0495622_0000231 3300046557 Bacteria 43928
229 Ga0495588_0000344 3300046674 Bacteria 30080
230 Ga0495658_0005522 3300046683 Bacteria 6215
231 Ga0495649_0000025 3300046694 Bacteria 175449
232 Ga0495672_0000016 3300047320 Bacteria 500601
233 Ga0495672_0000284 3300047320 Bacteria 70468
234 Ga0496126_0037152 3300048929 Bacteria 4548
235 Ga0501031_0000225 3300049568 Bacteria 32292
236 Ga0501032_0001619 3300049569 Bacteria 17969
237 Ga0501032_0064812 3300049569 Bacteria 2445
238 Ga0501033_0068169 3300049570 Bacteria 2616
239 Ga0501034_0000028 3300049571 Bacteria 255803
240 Ga0501034_0000187 3300049571 Bacteria 116046
241 Ga0501034_0001064 3300049571 Bacteria 38926
242 Ga0501034_0003685 3300049571 Bacteria 17315
243 Ga0501036_0001294 3300049572 Bacteria 19158
244 Ga0501037_0000146 3300049573 Bacteria 65527
245 Ga0501037_0017454 3300049573 Bacteria 5282
246 Ga0501038_0000865 3300049574 Bacteria 26821
247 Ga0501038_0094783 3300049574 Bacteria 2495
248 Ga0501043_0000139 3300049579 Bacteria 67517
249 Ga0501043_0085921 3300049579 Bacteria 2472
250 Ga0501046_0000061 3300049580 Bacteria 120487
251 Ga0501047_0000024 3300049581 Bacteria 230397
252 Ga0501048_0000002 3300049582 Bacteria 108048
253 Ga0501048_0002392 3300049582 Bacteria 14332
254 Ga0501070_0002542 3300049586 Bacteria 15979
255 Ga0501073_0007467 3300049589 Bacteria 8128
256 Ga0501073_0017206 3300049589 Bacteria 5236
257 Ga0501080_0000007 3300049742 Bacteria 135749
258 Ga0501083_0026001 3300049744 Unclassified 4049
259 Ga0501035_0000005 3300049822 Bacteria 392980
260 Ga0501044_0005023 3300049823 Bacteria 14776
261 Ga0501044_0010432 3300049823 Bacteria 10083
262 nmdc:mga03683_1060_c2 3300050489 Bacteria 3996
263 nmdc:mga03683_43_c2 3300050489 Bacteria 43939
264 nmdc:mga03n38_49_c1 3300050490 Bacteria 25851
265 nmdc:mga00v17_9670_c1 3300050491 Bacteria 5230
266 nmdc:mga0yw44_1355_c1 3300050492 Bacteria 4559
267 nmdc:mga0yw44_7_c1 3300050492 Bacteria 260877
268 nmdc:mga0k408_15_c1 3300050493 Bacteria 124193
269 nmdc:mga0k408_1_c1 3300050493 Bacteria 1089059
270 nmdc:mga0k408_32_c1 3300050493 Bacteria 81544
271 nmdc:mga0k408_54_c1 3300050493 Bacteria 57640
272 nmdc:mga0k408_691_c1 3300050493 Bacteria 15167
273 nmdc:mga06z11_203_c1 3300050494 Bacteria 23857
274 nmdc:mga06z11_92_c1 3300050494 Bacteria 38165
275 nmdc:mga04h51_3_c1 3300050495 Bacteria 207078
276 nmdc:mga07m45_1342_c2 3300050496 Bacteria 10327
277 nmdc:mga0sz30_10_c2 3300050516 Bacteria 32861
278 nmdc:mga0sz30_18932_c1 3300050516 Bacteria 2760
279 nmdc:mga0sz30_2_c1 3300050516 Bacteria 626403
280 Ga0500643_000009 3300053087 Bacteria 444150
281 Ga0500643_000061 3300053087 Bacteria 127538
282 Ga0500643_000157 3300053087 Bacteria 68258
283 Ga0500644_0000339 3300053088 Bacteria 23725
284 Ga0500646_0001451 3300053090 Bacteria 6276
285 Ga0500583_0000170 3300053092 Bacteria 26946
286 Ga0500583_0000734 3300053092 Bacteria 9502
287 Ga0500583_0004674 3300053092 Bacteria 4494
288 Ga0500651_0000235 3300053093 Bacteria 34448
289 Ga0500566_0000001 3300053094 Bacteria 1101031
290 Ga0500650_0000003 3300053098 Bacteria 164144
291 Ga0500555_000001 3300053103 Bacteria 1353713
292 Ga0500556_0000192 3300053104 Bacteria 49900
293 Ga0500562_000002 3300053108 Bacteria 977234
294 Ga0500593_000001 3300053117 Bacteria 784404
295 Ga0500594_0000001 3300053118 Bacteria 1178472
296 Ga0500614_000001 3300053123 Bacteria 1274484
297 Ga0500614_002305 3300053123 Bacteria 4281
298 Ga0500655_002548 3300053133 Bacteria 3309
299 Ga0500561_0000002 3300053137 Bacteria 394147
300 Ga0500577_0000097 3300053142 Bacteria 20986
301 Ga0500577_0002173 3300053142 Bacteria 5005
302 Ga0500579_000681 3300053143 Bacteria 19570
303 Ga0500589_000003 3300053147 Bacteria 220717
304 Ga0500616_0000005 3300053153 Bacteria 961725
305 Ga0500633_0000462 3300053160 Bacteria 6436
306 Ga0500649_000006 3300053722 Bacteria 116211
307 Ga0500570_000001 3300053724 Bacteria 243552

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049571 Ga0501034_0000187 Ga0501034_0000187_78323_80353 580
2 3300049571 Ga0501034_0000028 Ga0501034_0000028_65246_67060 591
3 3300038443 Ga0395901_0085423 Ga0395901_0085423_1410_3218 593
4 3300003316 rootH1_10003685 rootH1_1000368543 597
5 3300046694 Ga0495649_0000025 Ga0495649_0000025_169943_172012 599
6 3300013105 Ga0157369_10000003 Ga0157369_1000000360 600
7 3300037312 Ga0395899_0056105 Ga0395899_0056105_15_1943 602
8 3300037418 Ga0395900_0041155 Ga0395900_0041155_273_2201 602
9 3300038443 Ga0395901_0026267 Ga0395901_0026267_3319_5247 602
10 3300006844 Ga0075428_100003732 Ga0075428_1000037328 603
11 3300009098 Ga0105245_10000001 Ga0105245_10000001906 603
12 3300005327 Ga0070658_10000076 Ga0070658_100000762 607
13 3300025909 Ga0207705_10000019 Ga0207705_10000019259 607
14 3300005337 Ga0070682_100008418 Ga0070682_1000084185 608
15 3300005530 Ga0070679_100000332 Ga0070679_10000033247 613
16 3300006038 Ga0075365_10000002 Ga0075365_100000027 613
17 3300006051 Ga0075364_10001105 Ga0075364_1000110511 613
18 3300025949 Ga0207667_10118723 Ga0207667_101187232 615
19 3300001990 JGI24737J22298_10000346 JGI24737J22298_1000034610 616
20 3300002067 JGI24735J21928_10000055 JGI24735J21928_1000005535 616
21 3300006178 Ga0075367_10000017 Ga0075367_1000001716 618
22 3300006195 Ga0075366_10000064 Ga0075366_100000646 618
23 3300025913 Ga0207695_10046955 Ga0207695_100469552 618
24 3300050493 nmdc:mga0k408_32_c1 nmdc:mga0k408_32_c1_11830_14001 618
25 3300050494 nmdc:mga06z11_203_c1 nmdc:mga06z11_203_c1_11987_14158 618
26 3300005336 Ga0070680_100023167 Ga0070680_1000231675 619
27 3300005530 Ga0070679_100010671 Ga0070679_1000106717 619
28 3300025917 Ga0207660_10007723 Ga0207660_100077235 619
29 3300009174 Ga0105241_10001553 Ga0105241_100015536 620
30 3300025911 Ga0207654_10004515 Ga0207654_100045153 620
31 3300053087 Ga0500643_000061 Ga0500643_000061_50970_52850 620
32 3300053092 Ga0500583_0000734 Ga0500583_0000734_3785_5665 620
33 3300005339 Ga0070660_100000158 Ga0070660_10000015830 622
34 3300025919 Ga0207657_10000226 Ga0207657_100002262 622
35 3300037471 Ga0395905_0019335 Ga0395905_0019335_3650_5749 623
36 3300025949 Ga0207667_10004009 Ga0207667_1000400912 627
37 3300005985 Ga0081539_10004105 Ga0081539_1000410516 629
38 3300028654 Ga0265322_10012634 Ga0265322_100126341 629
39 3300028800 Ga0265338_10006564 Ga0265338_100065642 629
40 3300029957 Ga0265324_10012620 Ga0265324_100126201 629
41 3300031249 Ga0265339_10016253 Ga0265339_100162532 629
42 3300031344 Ga0265316_10036395 Ga0265316_100363954 629
43 3300047320 Ga0495672_0000284 Ga0495672_0000284_60150_62075 629
44 3300053104 Ga0500556_0000192 Ga0500556_0000192_513_2630 629
45 3300013296 Ga0157374_10005788 Ga0157374_100057882 630
46 3300049574 Ga0501038_0094783 Ga0501038_0094783_370_2340 630
47 3300005530 Ga0070679_100004467 Ga0070679_1000044672 631
48 3300037312 Ga0395899_0029243 Ga0395899_0029243_582_2690 631
49 3300037418 Ga0395900_0088770 Ga0395900_0088770_993_3101 631
50 3300037471 Ga0395905_0079088 Ga0395905_0079088_378_2486 631
51 3300009553 Ga0105249_10000744 Ga0105249_1000074429 632
52 3300014325 Ga0163163_10020552 Ga0163163_100205524 632
53 3300025927 Ga0207687_10000001 Ga0207687_10000001466 632
54 3300025927 Ga0207687_10000004 Ga0207687_10000004365 632
55 3300025961 Ga0207712_10000830 Ga0207712_1000083021 632
56 3300053123 Ga0500614_002305 Ga0500614_002305_2270_4201 632
57 3300006051 Ga0075364_10037162 Ga0075364_100371623 633
58 3300006195 Ga0075366_10000010 Ga0075366_100000104 633
59 3300050493 nmdc:mga0k408_691_c1 nmdc:mga0k408_691_c1_11886_13964 633
60 3300053087 Ga0500643_000009 Ga0500643_000009_174600_176798 633
61 3300053092 Ga0500583_0004674 Ga0500583_0004674_292_2451 633
62 3300005842 Ga0068858_100012836 Ga0068858_1000128363 634
63 3300025949 Ga0207667_10000278 Ga0207667_1000027822 634
64 3300026035 Ga0207703_10008920 Ga0207703_100089208 634
65 3300053108 Ga0500562_000002 Ga0500562_000002_311900_313972 634
66 3300037471 Ga0395905_0000604 Ga0395905_0000604_25303_27390 635
67 3300053137 Ga0500561_0000002 Ga0500561_0000002_315641_317719 637
68 3300003320 rootH2_10000311 rootH2_10000311261 638
69 3300005356 Ga0070674_100003287 Ga0070674_10000328711 638
70 3300005466 Ga0070685_10007371 Ga0070685_100073713 638
71 3300005563 Ga0068855_100016309 Ga0068855_1000163097 638
72 3300025937 Ga0207669_10010199 Ga0207669_100101997 638
73 3300028379 Ga0268266_10013003 Ga0268266_100130032 638
74 3300047320 Ga0495672_0000016 Ga0495672_0000016_72001_73980 638
75 3300006038 Ga0075365_10050842 Ga0075365_100508421 639
76 3300006195 Ga0075366_10000030 Ga0075366_1000003041 639
77 3300009993 Ga0105028_100150 Ga0105028_1001507 639
78 3300049589 Ga0501073_0007467 Ga0501073_0007467_2101_4110 639
79 3300049742 Ga0501080_0000007 Ga0501080_0000007_87087_89096 639
80 3300050493 nmdc:mga0k408_15_c1 nmdc:mga0k408_15_c1_5141_7213 639
81 3300053153 Ga0500616_0000005 Ga0500616_0000005_808922_810919 639
82 3300053724 Ga0500570_000001 Ga0500570_000001_176207_178330 639
83 3300005563 Ga0068855_100000001 Ga0068855_100000001820 640
84 3300006051 Ga0075364_10030901 Ga0075364_100309012 640
85 3300009174 Ga0105241_10000009 Ga0105241_10000009195 640
86 3300013105 Ga0157369_10000227 Ga0157369_1000022779 640
87 3300025911 Ga0207654_10000002 Ga0207654_1000000282 640
88 3300025949 Ga0207667_10000003 Ga0207667_10000003803 640
89 3300053087 Ga0500643_000157 Ga0500643_000157_50667_52721 640
90 3300005563 Ga0068855_100011869 Ga0068855_1000118695 641
91 3300005577 Ga0068857_100048667 Ga0068857_1000486672 641
92 3300006237 Ga0097621_100000002 Ga0097621_10000000253 641
93 3300006358 Ga0068871_100000090 Ga0068871_10000009016 641
94 3300009098 Ga0105245_10000002 Ga0105245_10000002500 641
95 3300013296 Ga0157374_10000018 Ga0157374_10000018167 641
96 3300025927 Ga0207687_10000001 Ga0207687_10000001711 641
97 3300025944 Ga0207661_10079125 Ga0207661_100791252 641
98 3300025949 Ga0207667_10014700 Ga0207667_100147005 641
99 3300026116 Ga0207674_10061755 Ga0207674_100617553 641
100 3300028800 Ga0265338_10015686 Ga0265338_100156861 641
101 3300053117 Ga0500593_000001 Ga0500593_000001_216255_218396 641
102 3300005327 Ga0070658_10001966 Ga0070658_100019668 642
103 3300005339 Ga0070660_100000979 Ga0070660_1000009791 642
104 3300005344 Ga0070661_100021164 Ga0070661_1000211645 642
105 3300005366 Ga0070659_100000287 Ga0070659_10000028740 642
106 3300005577 Ga0068857_100000012 Ga0068857_10000001248 642
107 3300005577 Ga0068857_100001306 Ga0068857_10000130617 642
108 3300009098 Ga0105245_10142352 Ga0105245_101423521 642
109 3300013307 Ga0157372_10087846 Ga0157372_100878462 642
110 3300025909 Ga0207705_10002571 Ga0207705_100025719 642
111 3300025917 Ga0207660_10058247 Ga0207660_100582471 642
112 3300025919 Ga0207657_10000997 Ga0207657_100009971 642
113 3300026041 Ga0207639_10013058 Ga0207639_100130583 642
114 3300026116 Ga0207674_10000015 Ga0207674_1000001570 642
115 3300026116 Ga0207674_10002189 Ga0207674_100021898 642
116 3300005367 Ga0070667_100013150 Ga0070667_1000131503 643
117 3300005843 Ga0068860_100012760 Ga0068860_1000127605 643
118 3300013296 Ga0157374_10000598 Ga0157374_100005987 643
119 3300028573 Ga0265334_10004340 Ga0265334_100043404 643
120 3300005543 Ga0070672_100010015 Ga0070672_1000100154 644
121 3300010375 Ga0105239_10027465 Ga0105239_100274653 644
122 3300037418 Ga0395900_0129262 Ga0395900_0129262_434_2419 644
123 3300037466 Ga0395898_0026090 Ga0395898_0026090_1438_3423 644
124 3300053088 Ga0500644_0000339 Ga0500644_0000339_11047_13212 645
125 3300053142 Ga0500577_0000097 Ga0500577_0000097_11398_13563 645
126 3300005530 Ga0070679_100019194 Ga0070679_1000191941 646
127 3300013296 Ga0157374_10040797 Ga0157374_100407975 646
128 3300014745 Ga0157377_10003618 Ga0157377_100036185 646
129 3300050516 nmdc:mga0sz30_2_c1 nmdc:mga0sz30_2_c1_135070_137028 646
130 3300053103 Ga0500555_000001 Ga0500555_000001_70954_73209 646
131 3300005327 Ga0070658_10000054 Ga0070658_1000005445 647
132 3300005330 Ga0070690_100011684 Ga0070690_1000116842 647
133 3300005364 Ga0070673_100000079 Ga0070673_10000007937 647
134 3300005466 Ga0070685_10000177 Ga0070685_1000017726 647
135 3300005466 Ga0070685_10006523 Ga0070685_100065234 647
136 3300005544 Ga0070686_100024276 Ga0070686_1000242765 647
137 3300005548 Ga0070665_100024889 Ga0070665_1000248893 647
138 3300006844 Ga0075428_100004910 Ga0075428_1000049109 647
139 3300009177 Ga0105248_10022205 Ga0105248_100222054 647
140 3300013296 Ga0157374_10001610 Ga0157374_1000161022 647
141 3300013297 Ga0157378_10002528 Ga0157378_1000252812 647
142 3300013307 Ga0157372_10000137 Ga0157372_1000013753 647
143 3300014745 Ga0157377_10005173 Ga0157377_100051732 647
144 3300025909 Ga0207705_10000161 Ga0207705_1000016153 647
145 3300025940 Ga0207691_10046945 Ga0207691_100469452 647
146 3300025960 Ga0207651_10000188 Ga0207651_1000018831 647
147 3300028379 Ga0268266_10026974 Ga0268266_100269743 647
148 3300053093 Ga0500651_0000235 Ga0500651_0000235_17660_19762 647
149 3300002244 JGI24742J22300_10000020 JGI24742J22300_100000209 648
150 3300005327 Ga0070658_10001788 Ga0070658_100017887 648
151 3300005328 Ga0070676_10000741 Ga0070676_1000074114 648
152 3300005328 Ga0070676_10011642 Ga0070676_100116422 648
153 3300005364 Ga0070673_100003154 Ga0070673_1000031545 648
154 3300005466 Ga0070685_10000251 Ga0070685_1000025137 648
155 3300005577 Ga0068857_100000266 Ga0068857_10000026610 648
156 3300013296 Ga0157374_10002774 Ga0157374_1000277414 648
157 3300025907 Ga0207645_10012972 Ga0207645_100129722 648
158 3300025909 Ga0207705_10002362 Ga0207705_100023626 648
159 3300025927 Ga0207687_10088225 Ga0207687_100882251 648
160 3300025960 Ga0207651_10001657 Ga0207651_100016576 648
161 3300026121 Ga0207683_10011417 Ga0207683_100114173 648
162 3300005335 Ga0070666_10013763 Ga0070666_100137635 649
163 3300005614 Ga0068856_100000002 Ga0068856_100000002318 649
164 3300009093 Ga0105240_10000003 Ga0105240_1000000380 649
165 3300009098 Ga0105245_10000127 Ga0105245_1000012747 649
166 3300009148 Ga0105243_10000001 Ga0105243_100000011170 649
167 3300009176 Ga0105242_10000001 Ga0105242_1000000188 649
168 3300010375 Ga0105239_10011454 Ga0105239_100114541 649
169 3300013105 Ga0157369_10026169 Ga0157369_100261691 649
170 3300013296 Ga0157374_10002998 Ga0157374_1000299813 649
171 3300025904 Ga0207647_10000087 Ga0207647_100000879 649
172 3300025913 Ga0207695_10000005 Ga0207695_1000000587 649
173 3300025927 Ga0207687_10000107 Ga0207687_1000010734 649
174 3300025934 Ga0207686_10000001 Ga0207686_100000011229 649
175 3300025935 Ga0207709_10000002 Ga0207709_1000000287 649
176 3300026078 Ga0207702_10000001 Ga0207702_10000001114 649
177 3300049569 Ga0501032_0064812 Ga0501032_0064812_123_2234 649
178 3300049570 Ga0501033_0068169 Ga0501033_0068169_124_2235 649
179 3300049571 Ga0501034_0001064 Ga0501034_0001064_17511_19622 649
180 3300049573 Ga0501037_0017454 Ga0501037_0017454_2856_4967 649
181 3300049579 Ga0501043_0085921 Ga0501043_0085921_334_2445 649
182 3300049581 Ga0501047_0000024 Ga0501047_0000024_85644_87755 649
183 3300049582 Ga0501048_0002392 Ga0501048_0002392_893_3004 649
184 3300049822 Ga0501035_0000005 Ga0501035_0000005_85729_87840 649
185 3300049823 Ga0501044_0010432 Ga0501044_0010432_1693_3804 649
186 3300005327 Ga0070658_10008093 Ga0070658_100080939 650
187 3300005327 Ga0070658_10072111 Ga0070658_100721113 650
188 3300005341 Ga0070691_10007208 Ga0070691_100072081 650
189 3300005345 Ga0070692_10016481 Ga0070692_100164812 650
190 3300005366 Ga0070659_100001474 Ga0070659_1000014746 650
191 3300025909 Ga0207705_10006724 Ga0207705_100067249 650
192 3300025932 Ga0207690_10000566 Ga0207690_1000056611 650
193 3300005614 Ga0068856_100004704 Ga0068856_1000047043 651
194 3300046674 Ga0495588_0000344 Ga0495588_0000344_21946_24051 651
195 3300053722 Ga0500649_000006 Ga0500649_000006_75063_77168 651
196 3300005435 Ga0070714_100000277 Ga0070714_10000027727 652
197 3300005458 Ga0070681_10002091 Ga0070681_1000209117 652
198 3300013296 Ga0157374_10064918 Ga0157374_100649183 652
199 3300025929 Ga0207664_10000812 Ga0207664_100008125 652
200 3300005614 Ga0068856_100017216 Ga0068856_1000172165 653
201 3300005937 Ga0081455_10000020 Ga0081455_10000020147 653
202 3300026078 Ga0207702_10024889 Ga0207702_100248894 653
203 3300028800 Ga0265338_10023457 Ga0265338_100234572 653
204 3300005355 Ga0070671_100000001 Ga0070671_1000000011242 654
205 3300005719 Ga0068861_100088540 Ga0068861_1000885402 654
206 3300009986 Ga0105033_100056 Ga0105033_1000568 654
207 3300014969 Ga0157376_10000001 Ga0157376_10000001830 654
208 3300025931 Ga0207644_10000001 Ga0207644_10000001192 654
209 3300031251 Ga0265327_10000025 Ga0265327_1000002545 654
210 3300037418 Ga0395900_0005511 Ga0395900_0005511_8138_10177 654
211 3300037466 Ga0395898_0012030 Ga0395898_0012030_2217_4256 654
212 3300050492 nmdc:mga0yw44_1355_c1 nmdc:mga0yw44_1355_c1_1110_3173 654
213 3300005289 Ga0065704_10090028 Ga0065704_100900282 655
214 3300005367 Ga0070667_100000503 Ga0070667_10000050329 655
215 3300006186 Ga0075369_10000004 Ga0075369_1000000492 655
216 3300006237 Ga0097621_100000052 Ga0097621_10000005262 655
217 3300006358 Ga0068871_100000006 Ga0068871_10000000679 655
218 3300009148 Ga0105243_10005385 Ga0105243_100053851 655
219 3300013102 Ga0157371_10000207 Ga0157371_1000020718 655
220 3300013104 Ga0157370_10021155 Ga0157370_100211554 655
221 3300025927 Ga0207687_10000008 Ga0207687_10000008366 655
222 3300025935 Ga0207709_10006851 Ga0207709_100068511 655
223 3300049568 Ga0501031_0000225 Ga0501031_0000225_10320_12434 655
224 3300049569 Ga0501032_0001619 Ga0501032_0001619_14410_16524 655
225 3300049571 Ga0501034_0003685 Ga0501034_0003685_3984_6098 655
226 3300049572 Ga0501036_0001294 Ga0501036_0001294_6536_8650 655
227 3300049573 Ga0501037_0000146 Ga0501037_0000146_34952_37066 655
228 3300049574 Ga0501038_0000865 Ga0501038_0000865_4423_6537 655
229 3300049579 Ga0501043_0000139 Ga0501043_0000139_47206_49320 655
230 3300049580 Ga0501046_0000061 Ga0501046_0000061_35012_37126 655
231 3300049582 Ga0501048_0000002 Ga0501048_0000002_86178_88292 655
232 3300049586 Ga0501070_0002542 Ga0501070_0002542_766_2880 655
233 3300049589 Ga0501073_0017206 Ga0501073_0017206_2199_4313 655
234 3300049744 Ga0501083_0026001 Ga0501083_0026001_163_2250 655
235 3300049823 Ga0501044_0005023 Ga0501044_0005023_5115_7229 655
236 3300050493 nmdc:mga0k408_54_c1 nmdc:mga0k408_54_c1_24486_26576 655
237 3300053147 Ga0500589_000003 Ga0500589_000003_65618_67765 655
238 3300005329 Ga0070683_100000239 Ga0070683_10000023923 656
239 3300005614 Ga0068856_100002238 Ga0068856_1000022383 656
240 3300013100 Ga0157373_10000092 Ga0157373_1000009223 656
241 3300026078 Ga0207702_10001968 Ga0207702_1000196821 656
242 3300005327 Ga0070658_10000097 Ga0070658_1000009718 657
243 3300009098 Ga0105245_10000096 Ga0105245_1000009626 657
244 3300013296 Ga0157374_10000014 Ga0157374_10000014366 657
245 3300025909 Ga0207705_10000057 Ga0207705_100000574 657
246 3300025909 Ga0207705_10014564 Ga0207705_100145642 657
247 3300053092 Ga0500583_0000170 Ga0500583_0000170_11720_13867 657
248 3300005577 Ga0068857_100000001 Ga0068857_10000000166 658
249 3300006042 Ga0075368_10000026 Ga0075368_100000264 658
250 3300006048 Ga0075363_100001027 Ga0075363_1000010278 658
251 3300009551 Ga0105238_10047367 Ga0105238_100473675 658
252 3300026116 Ga0207674_10000021 Ga0207674_1000002163 658
253 3300027866 Ga0209813_10000003 Ga0209813_10000003189 658
254 3300050490 nmdc:mga03n38_49_c1 nmdc:mga03n38_49_c1_7214_9310 658
255 3300050494 nmdc:mga06z11_92_c1 nmdc:mga06z11_92_c1_30932_33028 658
256 3300050495 nmdc:mga04h51_3_c1 nmdc:mga04h51_3_c1_30914_33010 658
257 3300006177 Ga0075362_10000084 Ga0075362_1000008415 659
258 3300013100 Ga0157373_10027488 Ga0157373_100274882 659
259 3300050489 nmdc:mga03683_43_c2 nmdc:mga03683_43_c2_27529_29634 659
260 3300053090 Ga0500646_0001451 Ga0500646_0001451_371_2473 659
261 3300053098 Ga0500650_0000003 Ga0500650_0000003_159165_161267 659
262 3300053118 Ga0500594_0000001 Ga0500594_0000001_461188_463290 659
263 3300053133 Ga0500655_002548 Ga0500655_002548_525_2627 659
264 3300053142 Ga0500577_0002173 Ga0500577_0002173_553_2655 659
265 3300053143 Ga0500579_000681 Ga0500579_000681_3911_6013 659
266 3300053160 Ga0500633_0000462 Ga0500633_0000462_3737_5839 659
267 3300006038 Ga0075365_10000007 Ga0075365_1000000770 660
268 3300006353 Ga0075370_10000671 Ga0075370_100006712 660
269 3300050492 nmdc:mga0yw44_7_c1 nmdc:mga0yw44_7_c1_191483_193576 660
270 3300050496 nmdc:mga07m45_1342_c2 nmdc:mga07m45_1342_c2_1945_4038 660
271 3300050516 nmdc:mga0sz30_18932_c1 nmdc:mga0sz30_18932_c1_21_2162 660
272 3300003323 rootH1_10039313 rootH1_100393134 661
273 3300006051 Ga0075364_10013323 Ga0075364_100133232 661
274 3300031251 Ga0265327_10000260 Ga0265327_1000026079 661
275 3300050489 nmdc:mga03683_1060_c2 nmdc:mga03683_1060_c2_1790_3883 661
276 3300050491 nmdc:mga00v17_9670_c1 nmdc:mga00v17_9670_c1_913_3006 661
277 3300005331 Ga0070670_100003558 Ga0070670_10000355813 662
278 3300005367 Ga0070667_100000001 Ga0070667_10000000176 662
279 3300005843 Ga0068860_100009562 Ga0068860_1000095624 662
280 3300025925 Ga0207650_10007301 Ga0207650_100073015 662
281 3300025986 Ga0207658_10000003 Ga0207658_1000000385 662
282 3300028381 Ga0268264_10012019 Ga0268264_100120193 662
283 3300046557 Ga0495622_0000231 Ga0495622_0000231_27879_29966 662
284 3300046683 Ga0495658_0005522 Ga0495658_0005522_2433_4520 662
285 3300053094 Ga0500566_0000001 Ga0500566_0000001_27179_29266 662
286 3300005327 Ga0070658_10001475 Ga0070658_1000147519 663
287 3300005336 Ga0070680_100000241 Ga0070680_1000002416 663
288 3300005339 Ga0070660_100000226 Ga0070660_10000022631 663
289 3300005458 Ga0070681_10018146 Ga0070681_100181466 663
290 3300005530 Ga0070679_100000499 Ga0070679_10000049934 663
291 3300013307 Ga0157372_10000774 Ga0157372_1000077434 663
292 3300025909 Ga0207705_10001771 Ga0207705_1000177119 663
293 3300025917 Ga0207660_10000180 Ga0207660_1000018040 663
294 3300025919 Ga0207657_10000502 Ga0207657_1000050241 663
295 3300025921 Ga0207652_10002428 Ga0207652_1000242810 663
296 3300025924 Ga0207694_10003882 Ga0207694_100038826 663
297 3300048929 Ga0496126_0037152 Ga0496126_0037152_2359_4443 663
298 3300053123 Ga0500614_000001 Ga0500614_000001_982895_985000 663
299 3300005329 Ga0070683_100000380 Ga0070683_10000038010 664
300 3300005535 Ga0070684_100008578 Ga0070684_1000085783 664
301 3300006186 Ga0075369_10001352 Ga0075369_100013523 664
302 3300006195 Ga0075366_10000003 Ga0075366_1000000372 664
303 3300025944 Ga0207661_10004800 Ga0207661_100048004 664
304 3300050493 nmdc:mga0k408_1_c1 nmdc:mga0k408_1_c1_67010_69121 664
305 3300050516 nmdc:mga0sz30_10_c2 nmdc:mga0sz30_10_c2_28629_30740 664
306 3300001915 JGI24741J21665_1003129 JGI24741J21665_10031295 675
307 3300001979 JGI24740J21852_10008226 JGI24740J21852_100082265 675

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22505

RNase_J_b_CASP

Ribonuclease J, beta-CASP domain

323

450

0.99

PF17770

RNase_J_C

Ribonuclease J C-terminal domain

561

660

0.96

PF07521

RMMBL

Zn-dependent metallo-hydrolase RNA specificity domain

464

521

0.93

PF00753

Lactamase_B

Metallo-beta-lactamase superfamily

111

303

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
5a0v-assembly2.cif.gz_B catalysis and 5' end sensing by ribonuclease rnase j of the metallo- beta-lactamase family 0.9529 57 519
6k6s-assembly1.cif.gz_B structure of rnase j1 from staphylococcus epidermidis 0.9434 67 519
5a0v-assembly2.cif.gz_B catalysis and 5' end sensing by ribonuclease rnase j of the metallo- beta-lactamase family 0.9426 57 519
6k6s-assembly1.cif.gz_B structure of rnase j1 from staphylococcus epidermidis 0.9351 67 519
6k6w-assembly1.cif.gz_A structure of rnase j2 from staphylococcus epidermidis 0.9235 63 518
ID Description Score Start End Superfamily
3zq4C02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Metallo-hydrolase/oxidoreductase 0.9574 280 426 3.40.50.10710
5a0tB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Metallo-hydrolase/oxidoreductase 0.9454 280 441 3.40.50.10710
3zq4E01 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.9413 67 525 3.60.15.10
3zq4E01 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.9382 67 525 3.60.15.10
3zq4C02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Metallo-hydrolase/oxidoreductase 0.9148 280 426 3.40.50.10710
ID Description Score Start End GO Terms
AF-K1S4U7-F1-model_v4 Metallo-beta-lactamase family protein 0.9769 198 376
AF-A0A7Z9YBV8-F1-model_v4 Ribonuclease J 0.9735 123 488 GO:0003723
GO:0004527
GO:0005737
GO:0046872
AF-A0A2N2CIV2-F1-model_v4 Ribonuclease J 0.9691 76 470 GO:0003723
GO:0004527
GO:0005737
GO:0046872
AF-A0A7Z9YBV8-F1-model_v4 Ribonuclease J 0.9681 123 488 GO:0003723
GO:0004527
GO:0005737
GO:0046872
AF-X1HTN2-F1-model_v4 Uncharacterized protein 0.9676 212 490 GO:0004518
GO:0046872

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pLDDT pTM Quality
82.76 0.74 High
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Predicted Structure (AlphaFold2)

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