F398939

General Info

Members Datasets Scaffolds Average Seq Length
306 205 612 638

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2855386786|2855388032
Length 692
Sequence ATPHVTDDANHGATTVPPVEELPSTAPPAAPQVDADLGAGERAGRRPPAVDVPELARLLDGRYAEVRGLVRSNLADYASILEEAETLSRADYRERVRDLVVEMAATGQTGMGFPEEYGGGGDLGASIAAFETLAFGDLSVLVKVGVQFGLFGGAILQLGTREHHDAYLRDLITGKLMGCFAMTESGHGSNVQALGTVATYDLASGEFVIETTSEQARKDYIGNAAAHAELAVVFAQLHVGGESHGVHAFVVPIRQDGEPAPGVRIEDDGLKMGLNGVDNGRIWFDRVRVPRSALLNRFAEVSPSGVYSSPIENPNKRFFTMLGTLVQGRVSVGGAGINAAKVAITLAVKYALRRRQFEATSEDAEELLLDYGLHQRRLLPLLARTYALHFAQEVVRGQLHDVLSEAGDGSAEDEHARRELESRAAGTKALGTWHATRTIQECREACGGAGYLSVNRFAALKADTDVFTTFEGDNHVLLQLVAKGLLTDYASDFEDLDQLGTVRFVTSLAVETVIEKTSVHKLLERIRDVLPGGDQWDQEAGLLDSDYQLAMLRFREEHMLSGVARRLKRGMDQGMNPGEVFSRVQDHVVAAANAHVERLTLEAFVDKVRGLPDGDTKVALGLLCDLHALSAIEADRAWFMEHGRLSVNRSKAISREIGSLCRQVRPIAGELVDAFGVPPEMLRAPDLLGTEA

Samples

Sample ID Description Type Environment
1 3300001977 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 Metagenome Rhizosphere
2 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
17 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
18 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
19 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
20 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
41 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
42 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
43 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
44 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
45 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
49 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
54 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
55 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
56 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
60 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
61 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
62 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
63 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
64 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
65 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
66 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
67 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
68 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
69 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
70 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
71 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
109 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
110 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
111 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
112 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
113 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
114 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
115 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
116 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
117 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
118 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
119 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
120 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
121 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
122 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
123 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
124 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
125 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
126 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
127 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
128 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
129 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
130 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
131 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
132 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
133 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
134 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
135 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
136 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
137 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
138 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
139 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
140 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
141 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
142 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
143 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
144 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
156 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
157 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
158 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
159 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
160 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
161 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
162 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
163 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
164 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
165 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
166 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
167 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
168 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
169 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
170 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
171 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
172 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
173 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
174 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
175 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
176 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
177 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
178 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
179 2643221548 Streptomyces sp. Root55 Isolate Unclassified
180 2643221561 Nocardioides sp. Root151 Isolate Unclassified
181 2643221576 Nocardioides sp. Root614 Isolate Unclassified
182 2643221590 Nocardioides sp. Root682 Isolate Unclassified
183 2643221604 Nocardioides sp. Root190 Isolate Unclassified
184 2643221615 Nocardioides sp. Root224 Isolate Unclassified
185 2643221617 Nocardioides sp. Root79 Isolate Unclassified
186 2643221620 Nocardioides sp. Root240 Isolate Unclassified
187 2643221641 Nocardioides sp. Root122 Isolate Unclassified
188 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
189 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
190 2643221696 Nocardioides sp. Root140 Isolate Unclassified
191 2738541305 Nocardioides sp. CF167 Isolate Unclassified
192 2739367898 Nocardioides sp. CF479 Isolate Unclassified
193 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
194 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
195 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
196 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
197 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
198 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
199 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
200 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
201 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
202 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
203 3001889506 Janibacter sp. YIM B02568 Isolate Unclassified
204 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
205 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 90.52
Metatranscriptomes 0.33
Isolates 9.15

Biome Distribution

Category Percentage (%)
Aerial Root 0.65
Bulb 0
Endosphere 6.54
Nodule 0.33
Rhizoplane 9.8
Rhizosphere 75.82
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24746J21847_1000741 3300001977 Bacteria 5015
2 JGI24744J21845_10001873 3300002077 Bacteria 4222
3 JGI24744J21845_10002713 3300002077 Bacteria 3612
4 Ga0070658_10003748 3300005327 Bacteria 12437
5 Ga0070676_10016032 3300005328 Bacteria 4138
6 Ga0070683_100017019 3300005329 Bacteria 6416
7 Ga0070683_100026246 3300005329 Bacteria 5242
8 Ga0070683_100028938 3300005329 Bacteria 5011
9 Ga0068869_100006622 3300005334 Bacteria 7351
10 Ga0070680_100004701 3300005336 Bacteria 10272
11 Ga0070680_100042220 3300005336 Bacteria 3700
12 Ga0068868_100026066 3300005338 Bacteria 4452
13 Ga0068868_100032981 3300005338 Bacteria 3988
14 Ga0070660_100005216 3300005339 Bacteria 8984
15 Ga0070660_100021144 3300005339 Bacteria 4794
16 Ga0070660_100036662 3300005339 Bacteria 3715
17 Ga0070691_10014905 3300005341 Bacteria 3569
18 Ga0070668_100007945 3300005347 Bacteria 7878
19 Ga0070668_100035448 3300005347 Bacteria 3804
20 Ga0070674_100005214 3300005356 Bacteria 7475
21 Ga0070674_100030854 3300005356 Bacteria 3546
22 Ga0070673_100102607 3300005364 Bacteria 2358
23 Ga0070659_100000483 3300005366 Bacteria 29241
24 Ga0070659_100001658 3300005366 Bacteria 16043
25 Ga0070659_100003064 3300005366 Bacteria 11864
26 Ga0070667_100017308 3300005367 Bacteria 5973
27 Ga0070667_100029349 3300005367 Bacteria 4582
28 Ga0070714_100031859 3300005435 Bacteria 4401
29 Ga0070710_10007942 3300005437 Bacteria 5156
30 Ga0070701_10001092 3300005438 Bacteria 9900
31 Ga0070711_100003096 3300005439 Bacteria 9618
32 Ga0070705_100005731 3300005440 Bacteria 6066
33 Ga0070663_100004015 3300005455 Bacteria 8584
34 Ga0070663_100075686 3300005455 Bacteria 2460
35 Ga0070678_100009201 3300005456 Bacteria 5968
36 Ga0070662_100029800 3300005457 Bacteria 3812
37 Ga0070662_100064506 3300005457 Bacteria 2682
38 Ga0070698_100001937 3300005471 Bacteria 22997
39 Ga0070679_100007370 3300005530 Bacteria 10278
40 Ga0070679_100012257 3300005530 Bacteria 8190
41 Ga0070679_100021408 3300005530 Bacteria 6312
42 Ga0070695_100009935 3300005545 Bacteria 5672
43 Ga0070665_100001178 3300005548 Bacteria 32035
44 Ga0070704_100012146 3300005549 Bacteria 5315
45 Ga0070664_100012467 3300005564 Bacteria 6911
46 Ga0068854_100004974 3300005578 Bacteria 8381
47 Ga0068856_100024312 3300005614 Bacteria 5895
48 Ga0068856_100066701 3300005614 Bacteria 3556
49 Ga0070702_100021112 3300005615 Bacteria 3421
50 Ga0068859_100007787 3300005617 Bacteria 10877
51 Ga0068866_10005592 3300005718 Bacteria 5198
52 Ga0068866_10015146 3300005718 Bacteria 3422
53 Ga0068861_100055915 3300005719 Bacteria 3010
54 Ga0068861_100058174 3300005719 Bacteria 2955
55 Ga0068863_100112216 3300005841 Bacteria 2596
56 Ga0068858_100008723 3300005842 Bacteria 9734
57 Ga0068858_100025472 3300005842 Bacteria 5503
58 Ga0068860_100000578 3300005843 Bacteria 44029
59 Ga0068860_100011830 3300005843 Bacteria 8601
60 Ga0068862_100025342 3300005844 Bacteria 4979
61 Ga0075365_10032109 3300006038 Bacteria 3373
62 Ga0075368_10013462 3300006042 Bacteria 3005
63 Ga0070716_100010477 3300006173 Bacteria 4650
64 Ga0070712_100003090 3300006175 Bacteria 10277
65 Ga0075367_10028019 3300006178 Bacteria 3210
66 Ga0075370_10026288 3300006353 Bacteria 3223
67 Ga0068871_100036142 3300006358 Bacteria 3931
68 Ga0075428_100008041 3300006844 Bacteria 11706
69 Ga0075430_100015230 3300006846 Bacteria 6548
70 Ga0068865_100011491 3300006881 Bacteria 5547
71 Ga0097620_100007786 3300006931 Bacteria 10877
72 Ga0105240_10049451 3300009093 Bacteria 5306
73 Ga0111539_10031495 3300009094 Bacteria 6442
74 Ga0105245_10023605 3300009098 Bacteria 5399
75 Ga0105245_10069003 3300009098 Bacteria 3205
76 Ga0105245_10127178 3300009098 Bacteria 2387
77 Ga0105247_10002369 3300009101 Bacteria 12841
78 Ga0105243_10003405 3300009148 Bacteria 12898
79 Ga0105242_10001481 3300009176 Bacteria 18486
80 Ga0105248_10011937 3300009177 Bacteria 9581
81 Ga0105237_10018455 3300009545 Bacteria 7218
82 Ga0105237_10085212 3300009545 Bacteria 3150
83 Ga0105238_10015776 3300009551 Bacteria 7647
84 Ga0105249_10017953 3300009553 Bacteria 6287
85 Ga0157371_10009397 3300013102 Bacteria 7700
86 Ga0157370_10033493 3300013104 Bacteria 5010
87 Ga0157369_10000950 3300013105 Bacteria 36815
88 Ga0157369_10006941 3300013105 Bacteria 13070
89 Ga0157369_10013345 3300013105 Bacteria 9292
90 Ga0157369_10068206 3300013105 Bacteria 3821
91 Ga0157369_10079548 3300013105 Bacteria 3511
92 Ga0157374_10045378 3300013296 Bacteria 4067
93 Ga0157378_10029587 3300013297 Bacteria 4836
94 Ga0163162_10041847 3300013306 Bacteria 4584
95 Ga0157372_10014453 3300013307 Bacteria 8446
96 Ga0157372_10029507 3300013307 Bacteria 5990
97 Ga0157375_10011626 3300013308 Bacteria 7779
98 Ga0157376_10107257 3300014969 Bacteria 2452
99 Ga0206353_10746415 3300020082 Bacteria 2389
100 Ga0207692_10002378 3300025898 Bacteria 7222
101 Ga0207692_10021011 3300025898 Bacteria 2980
102 Ga0207642_10001360 3300025899 Bacteria 7581
103 Ga0207642_10019266 3300025899 Bacteria 2639
104 Ga0207710_10006676 3300025900 Bacteria 4917
105 Ga0207647_10040413 3300025904 Bacteria 2937
106 Ga0207699_10055951 3300025906 Bacteria 2349
107 Ga0207645_10009009 3300025907 Bacteria 6927
108 Ga0207705_10018002 3300025909 Bacteria 5052
109 Ga0207707_10078224 3300025912 Bacteria 2888
110 Ga0207693_10004001 3300025915 Bacteria 12531
111 Ga0207693_10009215 3300025915 Bacteria 8059
112 Ga0207663_10004381 3300025916 Bacteria 7010
113 Ga0207660_10069275 3300025917 Bacteria 2561
114 Ga0207657_10025909 3300025919 Bacteria 5400
115 Ga0207657_10031199 3300025919 Bacteria 4830
116 Ga0207657_10032491 3300025919 Bacteria 4714
117 Ga0207652_10011556 3300025921 Bacteria 7119
118 Ga0207687_10017586 3300025927 Bacteria 4709
119 Ga0207664_10007940 3300025929 Bacteria 7377
120 Ga0207690_10000987 3300025932 Bacteria 18222
121 Ga0207706_10016667 3300025933 Bacteria 6632
122 Ga0207706_10019158 3300025933 Bacteria 6155
123 Ga0207686_10003256 3300025934 Bacteria 8738
124 Ga0207669_10002551 3300025937 Bacteria 7781
125 Ga0207704_10008596 3300025938 Bacteria 4890
126 Ga0207665_10002890 3300025939 Bacteria 11524
127 Ga0207691_10021114 3300025940 Bacteria 6152
128 Ga0207711_10023084 3300025941 Bacteria 5209
129 Ga0207689_10003329 3300025942 Bacteria 14718
130 Ga0207689_10026281 3300025942 Bacteria 4875
131 Ga0207661_10002847 3300025944 Bacteria 11951
132 Ga0207661_10006504 3300025944 Bacteria 8262
133 Ga0207712_10013395 3300025961 Bacteria 5256
134 Ga0207658_10045864 3300025986 Bacteria 3188
135 Ga0207639_10077850 3300026041 Bacteria 2615
136 Ga0207678_10014657 3300026067 Bacteria 6898
137 Ga0207678_10039569 3300026067 Bacteria 4092
138 Ga0207708_10019747 3300026075 Bacteria 5081
139 Ga0207708_10067497 3300026075 Bacteria 2736
140 Ga0207702_10015215 3300026078 Bacteria 6378
141 Ga0207702_10050811 3300026078 Bacteria 3501
142 Ga0207702_10106948 3300026078 Bacteria 2480
143 Ga0207648_10007246 3300026089 Bacteria 10936
144 Ga0207648_10045836 3300026089 Bacteria 3834
145 Ga0207674_10055669 3300026116 Bacteria 4020
146 Ga0207675_100006651 3300026118 Bacteria 10936
147 Ga0207675_100015441 3300026118 Bacteria 7123
148 Ga0207675_100016776 3300026118 Bacteria 6841
149 Ga0207683_10003472 3300026121 Bacteria 13754
150 Ga0207683_10006847 3300026121 Bacteria 9764
151 Ga0207683_10046738 3300026121 Bacteria 3790
152 Ga0268266_10003092 3300028379 Bacteria 16976
153 Ga0268264_10000226 3300028381 Bacteria 109817
154 Ga0268264_10017372 3300028381 Bacteria 5892
155 Ga0307412_10004704 3300031911 Bacteria 7615
156 Ga0307409_100031884 3300031995 Bacteria 3812
157 Ga0307409_100033700 3300031995 Bacteria 3730
158 Ga0307409_100065698 3300031995 Bacteria 2856
159 Ga0307416_100000602 3300032002 Bacteria 18517
160 Ga0307415_100000040 3300032126 Bacteria 56119
161 Ga0307415_100031418 3300032126 Bacteria 3421
162 Ga0307415_100058332 3300032126 Bacteria 2657
163 Ga0373931_0066412 3300035691 Bacteria 1957
164 Ga0395899_0016244 3300037312 Bacteria 5674
165 Ga0395900_0056216 3300037418 Bacteria 4051
166 Ga0395898_0011311 3300037466 Bacteria 9277
167 Ga0395898_0089947 3300037466 Bacteria 2954
168 Ga0395898_0093531 3300037466 Bacteria 2889
169 Ga0436364_0313515 3300037853 Bacteria 14964
170 Ga0436364_1135053 3300037853 Bacteria 5279
171 Ga0436365_0637748 3300039437 Bacteria 5179
172 Ga0439461_0005410 3300041410 Bacteria 2173
173 Ga0439434_0006046 3300042435 Bacteria 3531
174 Ga0466972_0025096 3300044658 Bacteria 2957
175 Ga0466972_0034136 3300044658 Bacteria 2494
176 Ga0466966_0003654 3300044684 Bacteria 10155
177 Ga0466966_0007807 3300044684 Bacteria 7083
178 Ga0466966_0019569 3300044684 Bacteria 4454
179 Ga0466961_0043144 3300044693 Bacteria 2889
180 Ga0466963_0003209 3300044694 Bacteria 9301
181 Ga0466963_0007059 3300044694 Bacteria 6687
182 Ga0466963_0054514 3300044694 Bacteria 2658
183 Ga0466970_0017324 3300044765 Bacteria 3722
184 Ga0466957_0003079 3300044842 Bacteria 9078
185 Ga0466957_0045067 3300044842 Bacteria 2674
186 Ga0466960_0003734 3300044901 Bacteria 5885
187 Ga0466960_0004153 3300044901 Bacteria 5638
188 Ga0466960_0014285 3300044901 Bacteria 3395
189 Ga0466959_0014731 3300045049 Bacteria 5692
190 Ga0466959_0055955 3300045049 Bacteria 2879
191 Ga0466959_0073418 3300045049 Bacteria 2475
192 Ga0466958_0021457 3300045836 Bacteria 3775
193 Ga0466967_0001202 3300045976 Bacteria 14567
194 Ga0466967_0004576 3300045976 Bacteria 9372
195 Ga0466967_0043193 3300045976 Bacteria 3901
196 Ga0466967_0135463 3300045976 Bacteria 2290
197 Ga0496100_0003052 3300048903 Bacteria 8647
198 Ga0496101_0007134 3300048904 Bacteria 7228
199 Ga0496101_0036836 3300048904 Bacteria 3466
200 Ga0496101_0048988 3300048904 Bacteria 3037
201 Ga0496101_0128259 3300048904 Bacteria 1924
202 Ga0496102_0007401 3300048905 Bacteria 9379
203 Ga0496102_0014614 3300048905 Bacteria 6824
204 Ga0496103_0003650 3300048906 Bacteria 9372
205 Ga0496103_0007102 3300048906 Bacteria 6687
206 Ga0496103_0040610 3300048906 Bacteria 2858
207 Ga0496104_0002997 3300048907 Bacteria 14550
208 Ga0496105_0006906 3300048908 Bacteria 8738
209 Ga0496105_0092327 3300048908 Bacteria 2500
210 Ga0496106_0027768 3300048909 Bacteria 4215
211 Ga0496107_0009781 3300048910 Bacteria 6651
212 Ga0496107_0029084 3300048910 Bacteria 3929
213 Ga0496107_0037965 3300048910 Bacteria 3457
214 Ga0496107_0069233 3300048910 Bacteria 2561
215 Ga0496108_0003257 3300048911 Bacteria 13052
216 Ga0496108_0041205 3300048911 Bacteria 3854
217 Ga0496109_0019818 3300048912 Bacteria 5934
218 Ga0496109_0077462 3300048912 Bacteria 3060
219 Ga0496110_0017300 3300048913 Bacteria 6032
220 Ga0496110_0154078 3300048913 Bacteria 2081
221 Ga0496112_0024014 3300048915 Bacteria 5834
222 Ga0496114_0006789 3300048917 Bacteria 9011
223 Ga0496114_0055567 3300048917 Bacteria 3302
224 Ga0496114_0081879 3300048917 Bacteria 2727
225 Ga0496115_0002856 3300048918 Bacteria 12439
226 Ga0496115_0011198 3300048918 Bacteria 6717
227 Ga0501032_0009498 3300049569 Bacteria 7048
228 Ga0501033_0003293 3300049570 Bacteria 13349
229 Ga0501034_0011846 3300049571 Bacteria 9027
230 Ga0501034_0089203 3300049571 Bacteria 3081
231 Ga0501036_0010949 3300049572 Bacteria 7498
232 Ga0501036_0052941 3300049572 Bacteria 3437
233 Ga0501037_0012269 3300049573 Bacteria 6306
234 Ga0501038_0025797 3300049574 Bacteria 5236
235 Ga0501041_0017340 3300049577 Bacteria 4285
236 Ga0501042_0032040 3300049578 Bacteria 3720
237 Ga0501042_0049133 3300049578 Bacteria 3009
238 Ga0501043_0016750 3300049579 Bacteria 5744
239 Ga0501046_0000399 3300049580 Bacteria 43497
240 Ga0501046_0002438 3300049580 Bacteria 17432
241 Ga0501047_0001714 3300049581 Bacteria 21315
242 Ga0501047_0127515 3300049581 Bacteria 2425
243 Ga0501067_0003186 3300049583 Bacteria 9054
244 Ga0501067_0007922 3300049583 Bacteria 5902
245 Ga0501068_0003259 3300049584 Bacteria 8703
246 Ga0501068_0056896 3300049584 Bacteria 2371
247 Ga0501070_0003386 3300049586 Bacteria 13832
248 Ga0501070_0028212 3300049586 Bacteria 4707
249 Ga0501070_0038201 3300049586 Bacteria 4006
250 Ga0501071_0029750 3300049587 Bacteria 3857
251 Ga0501072_0087749 3300049588 Bacteria 2469
252 Ga0501074_0001368 3300049590 Bacteria 16174
253 Ga0501075_0032059 3300049591 Bacteria 3903
254 Ga0501077_0018468 3300049593 Bacteria 4412
255 Ga0501079_0066298 3300049741 Bacteria 2786
256 Ga0501080_0004256 3300049742 Bacteria 12703
257 Ga0501080_0148435 3300049742 Bacteria 2168
258 Ga0501083_0050821 3300049744 Bacteria 2789
259 Ga0501035_0041421 3300049822 Bacteria 4158
260 nmdc:mga00v17_18273_c1 3300050491 Bacteria 3979
261 nmdc:mga00v17_9825_c1 3300050491 Bacteria 5198
262 nmdc:mga0yw44_16662_c1 3300050492 Bacteria 3977
263 nmdc:mga0yw44_22018_c1 3300050492 Bacteria 3566
264 nmdc:mga0yw44_45025_c1 3300050492 Bacteria 2643
265 nmdc:mga0yw44_6105_c1 3300050492 Bacteria 5783
266 nmdc:mga0yw44_9473_c1 3300050492 Bacteria 4928
267 nmdc:mga06z11_12244_c1 3300050494 Bacteria 3725
268 nmdc:mga06z11_28769_c1 3300050494 Bacteria 2670
269 nmdc:mga04h51_1504_c1 3300050495 Bacteria 5399
270 nmdc:mga07m45_14632_c1 3300050496 Bacteria 4183
271 nmdc:mga07m45_29124_c1 3300050496 Bacteria 3051
272 nmdc:mga07m45_29556_c1 3300050496 Bacteria 3031
273 nmdc:mga05p37_26950_c1 3300050507 Bacteria 6992
274 nmdc:mga0qj67_23184_c1 3300050509 Bacteria 4772
275 nmdc:mga0sz30_1481_c1 3300050516 Bacteria 8380
276 Ga0500556_0001813 3300053104 Bacteria 7842
277 Ga0500593_002248 3300053117 Bacteria 7055
278 Ga0466962_0011663 3300061719 Bacteria 4232
279 2855388032 2855386786 Bacteria 4752232
280 2643764339 2643221548 Bacteria 8053412
281 2643824783 2643221561 Bacteria 4984412
282 2643892748 2643221576 Bacteria 5214352
283 2643962197 2643221590 Bacteria 5214697
284 2644032146 2643221604 Bacteria 5014917
285 2644093206 2643221615 Bacteria 5487866
286 2644100055 2643221617 Bacteria 5139111
287 2644117661 2643221620 Bacteria 5134593
288 2644229588 2643221641 Bacteria 4490190
289 2644322817 2643221657 Bacteria 5490246
290 2644458602 2643221682 Bacteria 6743283
291 2644536034 2643221696 Bacteria 5431823
292 2738871091 2738541305 Bacteria 4910150
293 2740168381 2739367898 Bacteria 4367674
294 2804843333 2802429296 Bacteria 7227771
295 2812334951 2811994874 Bacteria 5367947
296 2819700146 2818991463 Bacteria 7948711
297 2857484913 2857481737 Bacteria 4761446
298 2873158620 2873151551 Bacteria 8625867
299 2875392411 2875391855 Bacteria 7600475
300 2918508394 2918501144 Bacteria 8668083
301 2966604733 2966598605 Bacteria 7676064
302 2984578869 2984576629 Bacteria 4248407
303 2990257879 2990256926 Bacteria 4252839
304 3001891370 3001889506 Bacteria 2975194
305 8025416681 8025413630 Bacteria 7014048
306 8054614224 8054609563 Bacteria 5170090
307 JGI24746J21847_1000741
308 JGI24744J21845_10001873
309 JGI24744J21845_10002713
310 Ga0070658_10003748
311 Ga0070676_10016032
312 Ga0070683_100017019
313 Ga0070683_100026246
314 Ga0070683_100028938
315 Ga0068869_100006622
316 Ga0070680_100004701
317 Ga0070680_100042220
318 Ga0068868_100026066
319 Ga0068868_100032981
320 Ga0070660_100005216
321 Ga0070660_100021144
322 Ga0070660_100036662
323 Ga0070691_10014905
324 Ga0070668_100007945
325 Ga0070668_100035448
326 Ga0070674_100005214
327 Ga0070674_100030854
328 Ga0070673_100102607
329 Ga0070659_100000483
330 Ga0070659_100001658
331 Ga0070659_100003064
332 Ga0070667_100017308
333 Ga0070667_100029349
334 Ga0070714_100031859
335 Ga0070710_10007942
336 Ga0070701_10001092
337 Ga0070711_100003096
338 Ga0070705_100005731
339 Ga0070663_100004015
340 Ga0070663_100075686
341 Ga0070678_100009201
342 Ga0070662_100029800
343 Ga0070662_100064506
344 Ga0070698_100001937
345 Ga0070679_100007370
346 Ga0070679_100012257
347 Ga0070679_100021408
348 Ga0070695_100009935
349 Ga0070665_100001178
350 Ga0070704_100012146
351 Ga0070664_100012467
352 Ga0068854_100004974
353 Ga0068856_100024312
354 Ga0068856_100066701
355 Ga0070702_100021112
356 Ga0068859_100007787
357 Ga0068866_10005592
358 Ga0068866_10015146
359 Ga0068861_100055915
360 Ga0068861_100058174
361 Ga0068863_100112216
362 Ga0068858_100008723
363 Ga0068858_100025472
364 Ga0068860_100000578
365 Ga0068860_100011830
366 Ga0068862_100025342
367 Ga0075365_10032109
368 Ga0075368_10013462
369 Ga0070716_100010477
370 Ga0070712_100003090
371 Ga0075367_10028019
372 Ga0075370_10026288
373 Ga0068871_100036142
374 Ga0075428_100008041
375 Ga0075430_100015230
376 Ga0068865_100011491
377 Ga0097620_100007786
378 Ga0105240_10049451
379 Ga0111539_10031495
380 Ga0105245_10023605
381 Ga0105245_10069003
382 Ga0105245_10127178
383 Ga0105247_10002369
384 Ga0105243_10003405
385 Ga0105242_10001481
386 Ga0105248_10011937
387 Ga0105237_10018455
388 Ga0105237_10085212
389 Ga0105238_10015776
390 Ga0105249_10017953
391 Ga0157371_10009397
392 Ga0157370_10033493
393 Ga0157369_10000950
394 Ga0157369_10006941
395 Ga0157369_10013345
396 Ga0157369_10068206
397 Ga0157369_10079548
398 Ga0157374_10045378
399 Ga0157378_10029587
400 Ga0163162_10041847
401 Ga0157372_10014453
402 Ga0157372_10029507
403 Ga0157375_10011626
404 Ga0157376_10107257
405 Ga0206353_10746415
406 Ga0207692_10002378
407 Ga0207692_10021011
408 Ga0207642_10001360
409 Ga0207642_10019266
410 Ga0207710_10006676
411 Ga0207647_10040413
412 Ga0207699_10055951
413 Ga0207645_10009009
414 Ga0207705_10018002
415 Ga0207707_10078224
416 Ga0207693_10004001
417 Ga0207693_10009215
418 Ga0207663_10004381
419 Ga0207660_10069275
420 Ga0207657_10025909
421 Ga0207657_10031199
422 Ga0207657_10032491
423 Ga0207652_10011556
424 Ga0207687_10017586
425 Ga0207664_10007940
426 Ga0207690_10000987
427 Ga0207706_10016667
428 Ga0207706_10019158
429 Ga0207686_10003256
430 Ga0207669_10002551
431 Ga0207704_10008596
432 Ga0207665_10002890
433 Ga0207691_10021114
434 Ga0207711_10023084
435 Ga0207689_10003329
436 Ga0207689_10026281
437 Ga0207661_10002847
438 Ga0207661_10006504
439 Ga0207712_10013395
440 Ga0207658_10045864
441 Ga0207639_10077850
442 Ga0207678_10014657
443 Ga0207678_10039569
444 Ga0207708_10019747
445 Ga0207708_10067497
446 Ga0207702_10015215
447 Ga0207702_10050811
448 Ga0207702_10106948
449 Ga0207648_10007246
450 Ga0207648_10045836
451 Ga0207674_10055669
452 Ga0207675_100006651
453 Ga0207675_100015441
454 Ga0207675_100016776
455 Ga0207683_10003472
456 Ga0207683_10006847
457 Ga0207683_10046738
458 Ga0268266_10003092
459 Ga0268264_10000226
460 Ga0268264_10017372
461 Ga0307412_10004704
462 Ga0307409_100031884
463 Ga0307409_100033700
464 Ga0307409_100065698
465 Ga0307416_100000602
466 Ga0307415_100000040
467 Ga0307415_100031418
468 Ga0307415_100058332
469 Ga0373931_0066412
470 Ga0395899_0016244
471 Ga0395900_0056216
472 Ga0395898_0011311
473 Ga0395898_0089947
474 Ga0395898_0093531
475 Ga0436364_0313515
476 Ga0436364_1135053
477 Ga0436365_0637748
478 Ga0439461_0005410
479 Ga0439434_0006046
480 Ga0466972_0025096
481 Ga0466972_0034136
482 Ga0466966_0003654
483 Ga0466966_0007807
484 Ga0466966_0019569
485 Ga0466961_0043144
486 Ga0466963_0003209
487 Ga0466963_0007059
488 Ga0466963_0054514
489 Ga0466970_0017324
490 Ga0466957_0003079
491 Ga0466957_0045067
492 Ga0466960_0003734
493 Ga0466960_0004153
494 Ga0466960_0014285
495 Ga0466959_0014731
496 Ga0466959_0055955
497 Ga0466959_0073418
498 Ga0466958_0021457
499 Ga0466967_0001202
500 Ga0466967_0004576
501 Ga0466967_0043193
502 Ga0466967_0135463
503 Ga0496100_0003052
504 Ga0496101_0007134
505 Ga0496101_0036836
506 Ga0496101_0048988
507 Ga0496101_0128259
508 Ga0496102_0007401
509 Ga0496102_0014614
510 Ga0496103_0003650
511 Ga0496103_0007102
512 Ga0496103_0040610
513 Ga0496104_0002997
514 Ga0496105_0006906
515 Ga0496105_0092327
516 Ga0496106_0027768
517 Ga0496107_0009781
518 Ga0496107_0029084
519 Ga0496107_0037965
520 Ga0496107_0069233
521 Ga0496108_0003257
522 Ga0496108_0041205
523 Ga0496109_0019818
524 Ga0496109_0077462
525 Ga0496110_0017300
526 Ga0496110_0154078
527 Ga0496112_0024014
528 Ga0496114_0006789
529 Ga0496114_0055567
530 Ga0496114_0081879
531 Ga0496115_0002856
532 Ga0496115_0011198
533 Ga0501032_0009498
534 Ga0501033_0003293
535 Ga0501034_0011846
536 Ga0501034_0089203
537 Ga0501036_0010949
538 Ga0501036_0052941
539 Ga0501037_0012269
540 Ga0501038_0025797
541 Ga0501041_0017340
542 Ga0501042_0032040
543 Ga0501042_0049133
544 Ga0501043_0016750
545 Ga0501046_0000399
546 Ga0501046_0002438
547 Ga0501047_0001714
548 Ga0501047_0127515
549 Ga0501067_0003186
550 Ga0501067_0007922
551 Ga0501068_0003259
552 Ga0501068_0056896
553 Ga0501070_0003386
554 Ga0501070_0028212
555 Ga0501070_0038201
556 Ga0501071_0029750
557 Ga0501072_0087749
558 Ga0501074_0001368
559 Ga0501075_0032059
560 Ga0501077_0018468
561 Ga0501079_0066298
562 Ga0501080_0004256
563 Ga0501080_0148435
564 Ga0501083_0050821
565 Ga0501035_0041421
566 nmdc:mga00v17_18273_c1
567 nmdc:mga00v17_9825_c1
568 nmdc:mga0yw44_16662_c1
569 nmdc:mga0yw44_22018_c1
570 nmdc:mga0yw44_45025_c1
571 nmdc:mga0yw44_6105_c1
572 nmdc:mga0yw44_9473_c1
573 nmdc:mga06z11_12244_c1
574 nmdc:mga06z11_28769_c1
575 nmdc:mga04h51_1504_c1
576 nmdc:mga07m45_14632_c1
577 nmdc:mga07m45_29124_c1
578 nmdc:mga07m45_29556_c1
579 nmdc:mga05p37_26950_c1
580 nmdc:mga0qj67_23184_c1
581 nmdc:mga0sz30_1481_c1
582 Ga0500556_0001813
583 Ga0500593_002248
584 Ga0466962_0011663
585 2855388032
586 2643764339
587 2643824783
588 2643892748
589 2643962197
590 2644032146
591 2644093206
592 2644100055
593 2644117661
594 2644229588
595 2644322817
596 2644458602
597 2644536034
598 2738871091
599 2740168381
600 2804843333
601 2812334951
602 2819700146
603 2857484913
604 2873158620
605 2875392411
606 2918508394
607 2966604733
608 2984578869
609 2990257879
610 3001891370
611 8025416681
612 8054614224

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01756

ACOX

Acyl-CoA oxidase

544

689

0.96

PF22924

ACOX_C_alpha1

Acyl-CoA oxidase, C-alpha1 domain

322

486

0.94

PF02770

Acyl-CoA_dh_M

Acyl-CoA dehydrogenase, middle domain

179

287

0.9

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

318

486

0.84

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

63

175

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
2vig-assembly1.cif.gz_B crystal structure of human short-chain acyl coa dehydrogenase 0.9039 17 438
2vig-assembly2.cif.gz_G crystal structure of human short-chain acyl coa dehydrogenase 0.8988 17 438
2vig-assembly2.cif.gz_F crystal structure of human short-chain acyl coa dehydrogenase 0.8987 17 440
2dvl-assembly1.cif.gz_A crystal structure of project tt0160 from thermus thermophilus hb8 0.8986 17 434
2vig-assembly2.cif.gz_H crystal structure of human short-chain acyl coa dehydrogenase 0.8983 17 440
ID Description Score Start End Superfamily
af_I1K4K8_520_650_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9816 494 620 1.20.140.10
af_I1KEV4_183_321_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9789 129 267 2.40.110.10
af_Q54LF1_498_627_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9746 494 619 1.20.140.10
af_Q9DBS4_459_590_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9745 494 620 1.20.140.10
af_Q8MMS1_490_618_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9738 494 612 1.20.140.10

Map