F398629

General Info

Members Datasets Scaffolds Average Seq Length
306 168 612 299

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10079791|Ga0105240_100797913
Length 323
Sequence MNELLAFVVRHGYLLIFAWVFVEQAGLPIPSAPLLLAAGALSGTGELNLGVSISVAVFGALAGDAMWYELGRRKGVRVLQLLCKISLEPDSCVRRTRVSFGEKGPRILLVAKFIPGLNAMVAPLAGIIRMGLRRFILFDFLGALLWVCAFTVSGYVFSGELERIAERAAFLGEWLVVLLLAAFAGYVGWKFYHRRKFLRNLRISRITPEELKLKIDSGEDVIIVDLRHALDFEAQPETIPGSIHMDAAELEEAYEVIPRDREIVLFCACPNEVTAARLALLLRSKGITRIRPLAEGYEGWRSRGFPMSQVRLESSGEAAAVTE

Samples

Sample ID Description Type Environment
1 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
2 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
3 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
17 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
18 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
28 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
29 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
30 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
31 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
32 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
33 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
37 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
38 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
39 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
40 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
41 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
42 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
43 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
47 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
48 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
52 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
55 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
56 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
57 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
58 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
59 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
63 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
91 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
92 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
93 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
94 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
95 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
96 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
97 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
98 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
99 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
100 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
101 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
102 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
103 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
104 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
105 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
106 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
107 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
108 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
109 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
110 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
111 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
112 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
113 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
114 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
115 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
116 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
117 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
118 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
119 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
120 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
121 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
122 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
123 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
124 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
125 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
126 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
127 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
128 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
129 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
130 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
131 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
132 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
133 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
134 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
135 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
136 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
137 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
138 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
139 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
140 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
141 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
142 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
143 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
144 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
145 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
146 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
147 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
148 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
149 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
150 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
151 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
152 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
153 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
154 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
155 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
156 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
157 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
158 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
159 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
160 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
161 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
162 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
163 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
164 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
166 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
167 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
168 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.35
Metatranscriptomes 0.65
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 3.92
Rhizosphere 96.08
Stem 0
Stem Tuber 0
Unclassified 22.88

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105240_10079791 3300009093 Bacteria 4027
2 Ga0058863_11940803 3300004799 Bacteria 2404
3 Ga0058862_10062853 3300004803 Bacteria 1112
4 Ga0065712_10001893 3300005290 Bacteria 7851
5 Ga0065715_10001066 3300005293 Bacteria 7757
6 Ga0070658_10047801 3300005327 Bacteria 3463
7 Ga0070683_100036603 3300005329 Bacteria 4491
8 Ga0070690_100158187 3300005330 Unclassified 1550
9 Ga0070666_10051946 3300005335 Unclassified 2761
10 Ga0070680_100043860 3300005336 Bacteria 3633
11 Ga0070680_100152473 3300005336 Unclassified 1940
12 Ga0070682_100035929 3300005337 Unclassified 3027
13 Ga0070689_100008849 3300005340 Bacteria 7112
14 Ga0070691_10127562 3300005341 Bacteria 1286
15 Ga0070661_100037482 3300005344 Bacteria 3527
16 Ga0070675_100150244 3300005354 Unclassified 1997
17 Ga0070688_100068381 3300005365 Unclassified 2264
18 Ga0070709_10043182 3300005434 Bacteria 2787
19 Ga0070709_10098114 3300005434 Bacteria 1946
20 Ga0070714_100115407 3300005435 Unclassified 2383
21 Ga0070714_100193542 3300005435 Unclassified 1857
22 Ga0070714_100639320 3300005435 Unclassified 1024
23 Ga0070713_100018740 3300005436 Bacteria 5265
24 Ga0070713_100044492 3300005436 Unclassified 3634
25 Ga0070713_100272461 3300005436 Unclassified 1550
26 Ga0070713_100751831 3300005436 Unclassified 933
27 Ga0070711_100043131 3300005439 Unclassified 3053
28 Ga0070708_100382895 3300005445 Bacteria 1326
29 Ga0070678_100046255 3300005456 Unclassified 3119
30 Ga0070681_10020608 3300005458 Bacteria 6606
31 Ga0070681_10030568 3300005458 Bacteria 5404
32 Ga0070681_10049817 3300005458 Bacteria 4181
33 Ga0070681_10120695 3300005458 Bacteria 2556
34 Ga0070681_10399659 3300005458 Bacteria 1285
35 Ga0070706_100000988 3300005467 Bacteria 30963
36 Ga0070706_100035832 3300005467 Bacteria 4581
37 Ga0070707_100000931 3300005468 Bacteria 29052
38 Ga0070707_100001012 3300005468 Bacteria 27871
39 Ga0070698_100014585 3300005471 Bacteria 8300
40 Ga0070698_100026563 3300005471 Bacteria 6026
41 Ga0070698_100176825 3300005471 Bacteria 2073
42 Ga0070699_100004816 3300005518 Bacteria 11911
43 Ga0070679_100014173 3300005530 Bacteria 7650
44 Ga0070679_100041320 3300005530 Unclassified 4590
45 Ga0070679_100045449 3300005530 Bacteria 4376
46 Ga0070679_100218124 3300005530 Bacteria 1869
47 Ga0070679_100233177 3300005530 Unclassified 1800
48 Ga0070684_100006511 3300005535 Bacteria 9041
49 Ga0070697_100182947 3300005536 Unclassified 1777
50 Ga0068853_100101588 3300005539 Bacteria 2543
51 Ga0068853_100225343 3300005539 Bacteria 1713
52 Ga0070686_100045656 3300005544 Unclassified 2761
53 Ga0070696_100038693 3300005546 Bacteria 3293
54 Ga0068855_100022985 3300005563 Bacteria 7472
55 Ga0068855_100299973 3300005563 Bacteria 1779
56 Ga0068857_100448362 3300005577 Bacteria 1206
57 Ga0068854_100242552 3300005578 Bacteria 1436
58 Ga0068854_100309070 3300005578 Unclassified 1281
59 Ga0068856_100000958 3300005614 Bacteria 30814
60 Ga0068856_100020626 3300005614 Bacteria 6403
61 Ga0068856_100289603 3300005614 Bacteria 1654
62 Ga0068851_10120756 3300005834 Bacteria 1408
63 Ga0068863_100210108 3300005841 Bacteria 1874
64 Ga0070717_10203726 3300006028 Unclassified 1734
65 Ga0070717_10368832 3300006028 Unclassified 1286
66 Ga0070717_10378226 3300006028 Bacteria 1269
67 Ga0070715_10054211 3300006163 Unclassified 1736
68 Ga0070712_100032219 3300006175 Unclassified 3537
69 Ga0097621_100084045 3300006237 Bacteria 2653
70 Ga0068871_100062351 3300006358 Bacteria 3046
71 Ga0075434_100102542 3300006871 Bacteria 2869
72 Ga0075436_100349647 3300006914 Bacteria 1065
73 Ga0075435_100307699 3300007076 Unclassified 1356
74 Ga0099794_10026677 3300007265 Bacteria 2673
75 Ga0099794_10089461 3300007265 Bacteria 1526
76 Ga0099794_10109966 3300007265 Bacteria 1380
77 Ga0105240_10237106 3300009093 Bacteria 2117
78 Ga0105240_10661886 3300009093 Unclassified 1143
79 Ga0111539_10085522 3300009094 Bacteria 3706
80 Ga0105245_10000850 3300009098 Bacteria 27685
81 Ga0105245_10008843 3300009098 Bacteria 8786
82 Ga0105245_10066117 3300009098 Bacteria 3272
83 Ga0105245_10116009 3300009098 Unclassified 2497
84 Ga0105241_10067829 3300009174 Bacteria 2762
85 Ga0105242_10162523 3300009176 Bacteria 1956
86 Ga0105238_10143221 3300009551 Bacteria 2367
87 Ga0099796_10010741 3300010159 Unclassified 2528
88 Ga0157373_10124109 3300013100 Bacteria 1816
89 Ga0157370_10130941 3300013104 Unclassified 2340
90 Ga0157370_10191311 3300013104 Bacteria 1899
91 Ga0157369_10051679 3300013105 Bacteria 4447
92 Ga0157369_10087604 3300013105 Bacteria 3324
93 Ga0157369_10181342 3300013105 Bacteria 2215
94 Ga0157369_10254926 3300013105 Unclassified 1831
95 Ga0157374_10008944 3300013296 Bacteria 8582
96 Ga0157374_10052274 3300013296 Bacteria 3804
97 Ga0157374_10095811 3300013296 Bacteria 2838
98 Ga0157374_10156752 3300013296 Bacteria 2216
99 Ga0157378_10001047 3300013297 Bacteria 25284
100 Ga0157378_10042601 3300013297 Unclassified 4029
101 Ga0157378_10285019 3300013297 Bacteria 1594
102 Ga0157378_10423933 3300013297 Unclassified 1316
103 Ga0157372_10180455 3300013307 Unclassified 2444
104 Ga0157372_10494286 3300013307 Bacteria 1426
105 Ga0157372_10535367 3300013307 Unclassified 1365
106 Ga0157375_10014120 3300013308 Bacteria 7122
107 Ga0157376_10006556 3300014969 Bacteria 8236
108 Ga0207697_10000098 3300025315 Bacteria 39409
109 Ga0207680_10055627 3300025903 Unclassified 2385
110 Ga0207705_10039095 3300025909 Bacteria 3399
111 Ga0207705_10081776 3300025909 Bacteria 2354
112 Ga0207684_10000507 3300025910 Bacteria 48732
113 Ga0207684_10014029 3300025910 Bacteria 6920
114 Ga0207707_10008211 3300025912 Bacteria 9059
115 Ga0207707_10037814 3300025912 Bacteria 4217
116 Ga0207707_10073079 3300025912 Bacteria 2990
117 Ga0207707_10083722 3300025912 Unclassified 2785
118 Ga0207707_10115327 3300025912 Bacteria 2347
119 Ga0207695_10139572 3300025913 Bacteria 2374
120 Ga0207695_10400602 3300025913 Unclassified 1257
121 Ga0207693_10009605 3300025915 Bacteria 7876
122 Ga0207693_10195488 3300025915 Unclassified 1591
123 Ga0207663_10012137 3300025916 Unclassified 4647
124 Ga0207660_10000731 3300025917 Bacteria 21858
125 Ga0207660_10041367 3300025917 Bacteria 3229
126 Ga0207649_10055164 3300025920 Unclassified 2476
127 Ga0207652_10001722 3300025921 Bacteria 19092
128 Ga0207652_10078561 3300025921 Unclassified 2882
129 Ga0207652_10100215 3300025921 Unclassified 2557
130 Ga0207652_10232119 3300025921 Unclassified 1663
131 Ga0207646_10000305 3300025922 Bacteria 66759
132 Ga0207646_10001302 3300025922 Bacteria 31093
133 Ga0207694_10021849 3300025924 Bacteria 4851
134 Ga0207659_10067629 3300025926 Unclassified 2596
135 Ga0207687_10077895 3300025927 Bacteria 2385
136 Ga0207700_10000587 3300025928 Bacteria 21266
137 Ga0207700_10037435 3300025928 Unclassified 3513
138 Ga0207700_10165563 3300025928 Bacteria 1840
139 Ga0207700_10600623 3300025928 Bacteria 979
140 Ga0207664_10170898 3300025929 Unclassified 1860
141 Ga0207670_10002246 3300025936 Bacteria 10102
142 Ga0207665_10081513 3300025939 Bacteria 2228
143 Ga0207665_10381093 3300025939 Unclassified 1070
144 Ga0207661_10045094 3300025944 Bacteria 3487
145 Ga0207661_10060777 3300025944 Bacteria 3050
146 Ga0207667_10075268 3300025949 Bacteria 3505
147 Ga0207667_10257375 3300025949 Bacteria 1785
148 Ga0207658_10070787 3300025986 Unclassified 2640
149 Ga0207677_10141554 3300026023 Bacteria 1842
150 Ga0207639_10096184 3300026041 Bacteria 2382
151 Ga0207702_10001488 3300026078 Bacteria 23194
152 Ga0207702_10063020 3300026078 Unclassified 3169
153 Ga0207702_10329311 3300026078 Unclassified 1456
154 Ga0207674_10417929 3300026116 Bacteria 1296
155 Ga0268266_10052908 3300028379 Bacteria 3487
156 Ga0265319_1001060 3300028563 Bacteria 17169
157 Ga0265318_10000420 3300028577 Bacteria 32662
158 Ga0265338_10003368 3300028800 Bacteria 22564
159 Ga0265338_10029044 3300028800 Bacteria 5496
160 Ga0265330_10017330 3300031235 Bacteria 3318
161 Ga0265330_10029736 3300031235 Bacteria 2455
162 Ga0265328_10036517 3300031239 Bacteria 1816
163 Ga0265320_10000418 3300031240 Bacteria 33718
164 Ga0265320_10000519 3300031240 Bacteria 29905
165 Ga0265320_10003446 3300031240 Bacteria 10636
166 Ga0265325_10014702 3300031241 Unclassified 4416
167 Ga0265329_10000270 3300031242 Bacteria 27402
168 Ga0265329_10029813 3300031242 Bacteria 1780
169 Ga0265340_10000405 3300031247 Bacteria 23104
170 Ga0265339_10031010 3300031249 Bacteria 3023
171 Ga0265331_10000317 3300031250 Bacteria 52403
172 Ga0265331_10027804 3300031250 Unclassified 2832
173 Ga0265316_10007190 3300031344 Bacteria 10518
174 Ga0265316_10009826 3300031344 Bacteria 8780
175 Ga0265313_10002306 3300031595 Bacteria 16724
176 Ga0265314_10000780 3300031711 Bacteria 37821
177 Ga0265342_10001199 3300031712 Bacteria 24635
178 Ga0373926_0001367 3300035083 Bacteria 7383
179 Ga0373926_0050044 3300035083 Unclassified 1505
180 Ga0373923_0043792 3300035111 Unclassified 1853
181 Ga0373945_0003466 3300035116 Bacteria 4962
182 Ga0373954_0027185 3300035118 Unclassified 2625
183 Ga0373954_0153509 3300035118 Unclassified 1125
184 Ga0373956_0168860 3300035119 Unclassified 1032
185 Ga0373943_0003701 3300035170 Bacteria 6953
186 Ga0373946_0032641 3300035171 Unclassified 2092
187 Ga0373924_0000002 3300035410 Bacteria 86598
188 Ga0373924_0003823 3300035410 Bacteria 5209
189 Ga0373924_0094342 3300035410 Bacteria 1282
190 Ga0373935_0002982 3300035692 Bacteria 9762
191 Ga0373927_0002542 3300035695 Bacteria 13307
192 Ga0373927_0071319 3300035695 Bacteria 2248
193 Ga0373947_0034669 3300035725 Bacteria 2985
194 Ga0373947_0183117 3300035725 Unclassified 1364
195 Ga0373937_0000119 3300036401 Bacteria 75565
196 Ga0373937_0012171 3300036401 Bacteria 7554
197 Ga0373937_0105892 3300036401 Bacteria 2614
198 Ga0373937_0444267 3300036401 Unclassified 1231
199 Ga0373925_0010418 3300037068 Bacteria 6745
200 Ga0373925_0045507 3300037068 Bacteria 3260
201 Ga0451577_0359615 3300042876 Bacteria 1320
202 Ga0453683_0002606 3300044673 Bacteria 13829
203 Ga0453683_0012845 3300044673 Bacteria 5480
204 Ga0453683_0039235 3300044673 Bacteria 2977
205 Ga0466963_0002042 3300044694 Bacteria 11118
206 Ga0453684_0082529 3300044712 Bacteria 4004
207 Ga0453684_0116116 3300044712 Unclassified 3242
208 Ga0453684_0410611 3300044712 Bacteria 1514
209 Ga0466957_0000563 3300044842 Bacteria 18741
210 Ga0466958_0326430 3300045836 Bacteria 986
211 Ga0466967_0036137 3300045976 Bacteria 4215
212 Ga0466967_0049246 3300045976 Bacteria 3684
213 Ga0495592_0100190 3300046454 Bacteria 2066
214 Ga0495592_0186370 3300046454 Bacteria 1409
215 Ga0495651_0000127 3300046462 Bacteria 56328
216 Ga0495651_0001471 3300046462 Bacteria 18224
217 Ga0495651_0012564 3300046462 Bacteria 6535
218 Ga0495653_0001074 3300046463 Bacteria 21079
219 Ga0495653_0002264 3300046463 Bacteria 15232
220 Ga0495653_0119106 3300046463 Bacteria 1885
221 Ga0495653_0165733 3300046463 Bacteria 1530
222 Ga0495580_0028030 3300046472 Bacteria 4095
223 Ga0495580_0107910 3300046472 Bacteria 1933
224 Ga0495664_0170438 3300046477 Bacteria 1320
225 Ga0495664_0220529 3300046477 Unclassified 1148
226 Ga0495594_0183814 3300046499 Unclassified 1190
227 Ga0495608_0007273 3300046511 Bacteria 7827
228 Ga0495608_0027683 3300046511 Bacteria 3856
229 Ga0495608_0050871 3300046511 Bacteria 2748
230 Ga0495628_0004376 3300046516 Bacteria 12530
231 Ga0495628_0010108 3300046516 Bacteria 8025
232 Ga0495628_0024893 3300046516 Unclassified 4896
233 Ga0495628_0308145 3300046516 Unclassified 1171
234 Ga0495630_0018436 3300046517 Bacteria 5127
235 Ga0495630_0059951 3300046517 Bacteria 2855
236 Ga0495666_0059414 3300046526 Bacteria 1829
237 Ga0495652_0016096 3300046529 Bacteria 6690
238 Ga0495652_0059723 3300046529 Bacteria 3225
239 Ga0495652_0107715 3300046529 Bacteria 2248
240 Ga0495587_0000525 3300046536 Bacteria 26513
241 Ga0495587_0077291 3300046536 Bacteria 1933
242 Ga0495645_0007406 3300046543 Bacteria 7635
243 Ga0495667_0000451 3300046559 Bacteria 26238
244 Ga0495667_0024520 3300046559 Bacteria 4062
245 Ga0495667_0059162 3300046559 Bacteria 2515
246 Ga0495667_0152179 3300046559 Unclassified 1489
247 Ga0495635_0018330 3300046663 Bacteria 4884
248 Ga0495635_0058451 3300046663 Bacteria 2653
249 Ga0495657_0032606 3300046675 Bacteria 3633
250 Ga0495657_0082440 3300046675 Bacteria 2078
251 Ga0495599_0011618 3300046678 Bacteria 5416
252 Ga0495599_0042622 3300046678 Bacteria 2848
253 Ga0495599_0066451 3300046678 Bacteria 2252
254 Ga0495623_0006954 3300046679 Bacteria 7353
255 Ga0495623_0013802 3300046679 Bacteria 5237
256 Ga0495623_0128586 3300046679 Bacteria 1519
257 Ga0495646_0046954 3300046680 Bacteria 2630
258 Ga0495646_0066497 3300046680 Bacteria 2132
259 Ga0495646_0124898 3300046680 Bacteria 1453
260 Ga0495658_0115244 3300046683 Bacteria 1620
261 Ga0495613_0049079 3300046689 Bacteria 3116
262 Ga0495613_0134181 3300046689 Bacteria 1772
263 Ga0495624_0008026 3300046690 Bacteria 7393
264 Ga0495600_0276777 3300046809 Unclassified 1063
265 Ga0495604_0000857 3300047317 Bacteria 25393
266 Ga0495604_0026914 3300047317 Bacteria 4576
267 Ga0495604_0059080 3300047317 Bacteria 2941
268 Ga0495604_0088056 3300047317 Bacteria 2310
269 Ga0495674_0006578 3300047319 Bacteria 11144
270 Ga0495674_0021430 3300047319 Bacteria 5979
271 Ga0495674_0034820 3300047319 Bacteria 4550
272 Ga0495674_0048641 3300047319 Bacteria 3752
273 Ga0495674_0095316 3300047319 Bacteria 2537
274 Ga0495674_0165049 3300047319 Bacteria 1851
275 Ga0495674_0264596 3300047319 Bacteria 1412
276 Ga0495676_0063957 3300047321 Unclassified 2865
277 Ga0495680_0000817 3300047322 Bacteria 34725
278 Ga0495680_0005640 3300047322 Bacteria 11730
279 Ga0495680_0079837 3300047322 Bacteria 2473
280 Ga0495675_0000313 3300047444 Bacteria 34765
281 Ga0495675_0007365 3300047444 Bacteria 6780
282 Ga0495675_0027083 3300047444 Bacteria 3653
283 Ga0495675_0081093 3300047444 Bacteria 2043
284 Ga0495684_0059185 3300047471 Bacteria 2918
285 Ga0495684_0223840 3300047471 Bacteria 1378
286 Ga0495602_0002984 3300048088 Bacteria 17345
287 Ga0495602_0027807 3300048088 Bacteria 5426
288 Ga0495602_0052485 3300048088 Bacteria 3621
289 Ga0495614_0019960 3300048089 Bacteria 2899
290 Ga0496104_0200751 3300048907 Bacteria 1906
291 Ga0496105_0031075 3300048908 Bacteria 4378
292 Ga0496105_0118084 3300048908 Unclassified 2188
293 Ga0496109_0033323 3300048912 Bacteria 4634
294 Ga0496111_0002332 3300048914 Bacteria 11435
295 Ga0496112_0106100 3300048915 Bacteria 2779
296 Ga0496112_0172606 3300048915 Unclassified 2127
297 Ga0496112_0185023 3300048915 Bacteria 2047
298 Ga0496112_0444127 3300048915 Bacteria 1235
299 Ga0496113_0000779 3300048916 Bacteria 16480
300 Ga0496114_0018649 3300048917 Bacteria 5613
301 Ga0496115_0068352 3300048918 Unclassified 2876
302 Ga0501033_0094352 3300049570 Bacteria 2188
303 Ga0501035_0076133 3300049822 Bacteria 2967
304 nmdc:mga0n895_100183_c1 3300050512 Bacteria 2906
305 nmdc:mga08x19_282712_c1 3300050514 Bacteria 1150
306 Ga0495612_0004291 3300053078 Bacteria 5917
307 Ga0105240_10079791
308 Ga0058863_11940803
309 Ga0058862_10062853
310 Ga0065712_10001893
311 Ga0065715_10001066
312 Ga0070658_10047801
313 Ga0070683_100036603
314 Ga0070690_100158187
315 Ga0070666_10051946
316 Ga0070680_100043860
317 Ga0070680_100152473
318 Ga0070682_100035929
319 Ga0070689_100008849
320 Ga0070691_10127562
321 Ga0070661_100037482
322 Ga0070675_100150244
323 Ga0070688_100068381
324 Ga0070709_10043182
325 Ga0070709_10098114
326 Ga0070714_100115407
327 Ga0070714_100193542
328 Ga0070714_100639320
329 Ga0070713_100018740
330 Ga0070713_100044492
331 Ga0070713_100272461
332 Ga0070713_100751831
333 Ga0070711_100043131
334 Ga0070708_100382895
335 Ga0070678_100046255
336 Ga0070681_10020608
337 Ga0070681_10030568
338 Ga0070681_10049817
339 Ga0070681_10120695
340 Ga0070681_10399659
341 Ga0070706_100000988
342 Ga0070706_100035832
343 Ga0070707_100000931
344 Ga0070707_100001012
345 Ga0070698_100014585
346 Ga0070698_100026563
347 Ga0070698_100176825
348 Ga0070699_100004816
349 Ga0070679_100014173
350 Ga0070679_100041320
351 Ga0070679_100045449
352 Ga0070679_100218124
353 Ga0070679_100233177
354 Ga0070684_100006511
355 Ga0070697_100182947
356 Ga0068853_100101588
357 Ga0068853_100225343
358 Ga0070686_100045656
359 Ga0070696_100038693
360 Ga0068855_100022985
361 Ga0068855_100299973
362 Ga0068857_100448362
363 Ga0068854_100242552
364 Ga0068854_100309070
365 Ga0068856_100000958
366 Ga0068856_100020626
367 Ga0068856_100289603
368 Ga0068851_10120756
369 Ga0068863_100210108
370 Ga0070717_10203726
371 Ga0070717_10368832
372 Ga0070717_10378226
373 Ga0070715_10054211
374 Ga0070712_100032219
375 Ga0097621_100084045
376 Ga0068871_100062351
377 Ga0075434_100102542
378 Ga0075436_100349647
379 Ga0075435_100307699
380 Ga0099794_10026677
381 Ga0099794_10089461
382 Ga0099794_10109966
383 Ga0105240_10237106
384 Ga0105240_10661886
385 Ga0111539_10085522
386 Ga0105245_10000850
387 Ga0105245_10008843
388 Ga0105245_10066117
389 Ga0105245_10116009
390 Ga0105241_10067829
391 Ga0105242_10162523
392 Ga0105238_10143221
393 Ga0099796_10010741
394 Ga0157373_10124109
395 Ga0157370_10130941
396 Ga0157370_10191311
397 Ga0157369_10051679
398 Ga0157369_10087604
399 Ga0157369_10181342
400 Ga0157369_10254926
401 Ga0157374_10008944
402 Ga0157374_10052274
403 Ga0157374_10095811
404 Ga0157374_10156752
405 Ga0157378_10001047
406 Ga0157378_10042601
407 Ga0157378_10285019
408 Ga0157378_10423933
409 Ga0157372_10180455
410 Ga0157372_10494286
411 Ga0157372_10535367
412 Ga0157375_10014120
413 Ga0157376_10006556
414 Ga0207697_10000098
415 Ga0207680_10055627
416 Ga0207705_10039095
417 Ga0207705_10081776
418 Ga0207684_10000507
419 Ga0207684_10014029
420 Ga0207707_10008211
421 Ga0207707_10037814
422 Ga0207707_10073079
423 Ga0207707_10083722
424 Ga0207707_10115327
425 Ga0207695_10139572
426 Ga0207695_10400602
427 Ga0207693_10009605
428 Ga0207693_10195488
429 Ga0207663_10012137
430 Ga0207660_10000731
431 Ga0207660_10041367
432 Ga0207649_10055164
433 Ga0207652_10001722
434 Ga0207652_10078561
435 Ga0207652_10100215
436 Ga0207652_10232119
437 Ga0207646_10000305
438 Ga0207646_10001302
439 Ga0207694_10021849
440 Ga0207659_10067629
441 Ga0207687_10077895
442 Ga0207700_10000587
443 Ga0207700_10037435
444 Ga0207700_10165563
445 Ga0207700_10600623
446 Ga0207664_10170898
447 Ga0207670_10002246
448 Ga0207665_10081513
449 Ga0207665_10381093
450 Ga0207661_10045094
451 Ga0207661_10060777
452 Ga0207667_10075268
453 Ga0207667_10257375
454 Ga0207658_10070787
455 Ga0207677_10141554
456 Ga0207639_10096184
457 Ga0207702_10001488
458 Ga0207702_10063020
459 Ga0207702_10329311
460 Ga0207674_10417929
461 Ga0268266_10052908
462 Ga0265319_1001060
463 Ga0265318_10000420
464 Ga0265338_10003368
465 Ga0265338_10029044
466 Ga0265330_10017330
467 Ga0265330_10029736
468 Ga0265328_10036517
469 Ga0265320_10000418
470 Ga0265320_10000519
471 Ga0265320_10003446
472 Ga0265325_10014702
473 Ga0265329_10000270
474 Ga0265329_10029813
475 Ga0265340_10000405
476 Ga0265339_10031010
477 Ga0265331_10000317
478 Ga0265331_10027804
479 Ga0265316_10007190
480 Ga0265316_10009826
481 Ga0265313_10002306
482 Ga0265314_10000780
483 Ga0265342_10001199
484 Ga0373926_0001367
485 Ga0373926_0050044
486 Ga0373923_0043792
487 Ga0373945_0003466
488 Ga0373954_0027185
489 Ga0373954_0153509
490 Ga0373956_0168860
491 Ga0373943_0003701
492 Ga0373946_0032641
493 Ga0373924_0000002
494 Ga0373924_0003823
495 Ga0373924_0094342
496 Ga0373935_0002982
497 Ga0373927_0002542
498 Ga0373927_0071319
499 Ga0373947_0034669
500 Ga0373947_0183117
501 Ga0373937_0000119
502 Ga0373937_0012171
503 Ga0373937_0105892
504 Ga0373937_0444267
505 Ga0373925_0010418
506 Ga0373925_0045507
507 Ga0451577_0359615
508 Ga0453683_0002606
509 Ga0453683_0012845
510 Ga0453683_0039235
511 Ga0466963_0002042
512 Ga0453684_0082529
513 Ga0453684_0116116
514 Ga0453684_0410611
515 Ga0466957_0000563
516 Ga0466958_0326430
517 Ga0466967_0036137
518 Ga0466967_0049246
519 Ga0495592_0100190
520 Ga0495592_0186370
521 Ga0495651_0000127
522 Ga0495651_0001471
523 Ga0495651_0012564
524 Ga0495653_0001074
525 Ga0495653_0002264
526 Ga0495653_0119106
527 Ga0495653_0165733
528 Ga0495580_0028030
529 Ga0495580_0107910
530 Ga0495664_0170438
531 Ga0495664_0220529
532 Ga0495594_0183814
533 Ga0495608_0007273
534 Ga0495608_0027683
535 Ga0495608_0050871
536 Ga0495628_0004376
537 Ga0495628_0010108
538 Ga0495628_0024893
539 Ga0495628_0308145
540 Ga0495630_0018436
541 Ga0495630_0059951
542 Ga0495666_0059414
543 Ga0495652_0016096
544 Ga0495652_0059723
545 Ga0495652_0107715
546 Ga0495587_0000525
547 Ga0495587_0077291
548 Ga0495645_0007406
549 Ga0495667_0000451
550 Ga0495667_0024520
551 Ga0495667_0059162
552 Ga0495667_0152179
553 Ga0495635_0018330
554 Ga0495635_0058451
555 Ga0495657_0032606
556 Ga0495657_0082440
557 Ga0495599_0011618
558 Ga0495599_0042622
559 Ga0495599_0066451
560 Ga0495623_0006954
561 Ga0495623_0013802
562 Ga0495623_0128586
563 Ga0495646_0046954
564 Ga0495646_0066497
565 Ga0495646_0124898
566 Ga0495658_0115244
567 Ga0495613_0049079
568 Ga0495613_0134181
569 Ga0495624_0008026
570 Ga0495600_0276777
571 Ga0495604_0000857
572 Ga0495604_0026914
573 Ga0495604_0059080
574 Ga0495604_0088056
575 Ga0495674_0006578
576 Ga0495674_0021430
577 Ga0495674_0034820
578 Ga0495674_0048641
579 Ga0495674_0095316
580 Ga0495674_0165049
581 Ga0495674_0264596
582 Ga0495676_0063957
583 Ga0495680_0000817
584 Ga0495680_0005640
585 Ga0495680_0079837
586 Ga0495675_0000313
587 Ga0495675_0007365
588 Ga0495675_0027083
589 Ga0495675_0081093
590 Ga0495684_0059185
591 Ga0495684_0223840
592 Ga0495602_0002984
593 Ga0495602_0027807
594 Ga0495602_0052485
595 Ga0495614_0019960
596 Ga0496104_0200751
597 Ga0496105_0031075
598 Ga0496105_0118084
599 Ga0496109_0033323
600 Ga0496111_0002332
601 Ga0496112_0106100
602 Ga0496112_0172606
603 Ga0496112_0185023
604 Ga0496112_0444127
605 Ga0496113_0000779
606 Ga0496114_0018649
607 Ga0496115_0068352
608 Ga0501033_0094352
609 Ga0501035_0076133
610 nmdc:mga0n895_100183_c1
611 nmdc:mga08x19_282712_c1
612 Ga0495612_0004291

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00581

Rhodanese

Rhodanese-like domain

207

303

0.88

PF09335

VTT_dom

VTT domain

29

156

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
3gk5-assembly1.cif.gz_A crystal structure of rhodanese-related protein (tvg0868615) from thermoplasma volcanium, northeast structural genomics consortium target tvr109a 0.8074 226 287
5ve4-assembly2.cif.gz_B crystal structure of persulfide dioxygenase-rhodanese fusion protein with rhodanese domain inactivating mutation (c314s) from burkholderia phytofirmans 0.7989 226 287
5ve5-assembly2.cif.gz_B crystal structure of persulfide dioxygenase rhodanese fusion protein with rhodanese domain inactivating mutation (c314s) from burkholderia phytofirmans in complex with glutathione 0.7984 225 287
5ve3-assembly2.cif.gz_A crystal structure of wild-type persulfide dioxygenase-rhodanese fusion protein from burkholderia phytofirmans 0.7924 226 285
5ve4-assembly1.cif.gz_A crystal structure of persulfide dioxygenase-rhodanese fusion protein with rhodanese domain inactivating mutation (c314s) from burkholderia phytofirmans 0.792 225 287
ID Description Score Start End Superfamily
af_O08446_114_219_3.40.250.10 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.8163 226 288 3.40.250.10
af_P0ADR0_21_135_1.10.1760.20 Mainly Alpha;Orthogonal Bundle;Arp2/3 complex 21 kDa subunit ARPC3; 0.8151 56 175 1.10.1760.20
3gk5A00 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.8074 226 287 3.40.250.10
af_P9WMN7_275_389_3.40.250.10 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.7969 226 287 3.40.250.10
5ve3A02 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.7924 226 285 3.40.250.10
ID Description Score Start End GO Terms
AF-A0A7V2QLF7-F1-model_v4 Rhodanese domain-containing protein 0.923 225 288
AF-A0A5C8MHG0-F1-model_v4 DedA family protein 0.9043 56 181 GO:0005886
AF-A0A2T6C7S5-F1-model_v4 Membrane protein DedA with SNARE-associated domain 0.8713 26 181 GO:0005886
AF-A0A1I7L7N8-F1-model_v4 Membrane protein DedA, SNARE-associated domain 0.8699 41 189 GO:0005886
AF-A0A7V2QLF7-F1-model_v4 Rhodanese domain-containing protein 0.8608 225 288

Map