F395710

General Info

Members Datasets Scaffolds Average Seq Length
301 192 602 189

Family's Representative Sequence

Representative Sequence 3300005330|Ga0070690_100521100|Ga0070690_1005211001
Length 206
Sequence MLTLSYASSVESDRNDSVSFDTEPDDAELARRIAAARPGLGTAAEAELYRRLAPRVRLYGLKHLRERQAAADLVQQVLLMTIERLRAGQVREPERLASYVLGMCRMVVLDLRRTHARHERLLGTFAHDLSGEQPASTPHLDDASLLRCLERLPERERSILVMTFYDDRQAREVATDLGISEGNVRVIRHRGLERLRECMNGHEAAP

Samples

Sample ID Description Type Environment
1 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
22 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
23 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
24 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
25 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
26 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
27 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
28 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
29 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
30 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
31 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
32 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
33 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
34 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
35 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
36 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
37 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
38 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
39 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
40 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
41 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
42 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
43 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
44 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
45 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
46 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
47 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
48 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
49 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
50 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
51 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
52 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
53 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
54 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
56 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
57 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
58 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
59 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
60 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
61 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
62 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
63 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
64 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
66 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
67 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
68 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
69 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
70 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
71 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
72 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
73 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
74 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
75 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
76 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
77 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
78 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
79 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
80 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
81 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
82 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
83 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
84 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
85 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
86 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
87 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
88 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
128 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
129 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
130 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
131 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
132 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
133 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
134 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
135 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
136 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
137 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
138 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
139 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
140 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
141 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
142 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
143 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
144 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
145 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
146 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
147 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
148 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
149 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
150 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
151 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
152 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
153 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
154 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
155 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
156 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
157 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
158 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
159 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
160 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
161 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
162 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
163 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
164 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
165 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
166 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
167 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
168 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
169 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
172 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
173 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
175 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
176 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
177 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
178 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
179 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
180 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
181 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
182 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
183 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
184 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
185 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
186 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
187 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
188 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
189 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
190 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
191 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
192 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.33
Nodule 0
Rhizoplane 1
Rhizosphere 98.67
Stem 0
Stem Tuber 0
Unclassified 29.9

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070690_100521100 3300005330 Bacteria 892
2 MBSR1b_contig_2184876 2162886012 Unclassified 1071
3 Ga0065712_10202377 3300005290 Unclassified 1103
4 Ga0070690_100254255 3300005330 Bacteria 1244
5 Ga0070670_100118516 3300005331 Bacteria 2283
6 Ga0068869_100280618 3300005334 Bacteria 1339
7 Ga0070666_10571933 3300005335 Bacteria 823
8 Ga0070680_100010331 3300005336 Bacteria 7198
9 Ga0068868_101406343 3300005338 Unclassified 651
10 Ga0070689_100395844 3300005340 Bacteria 1167
11 Ga0070689_100466946 3300005340 Unclassified 1076
12 Ga0070691_10165148 3300005341 Bacteria 1144
13 Ga0070687_100177589 3300005343 Bacteria 1273
14 Ga0070661_100415751 3300005344 Bacteria 1065
15 Ga0070692_10148856 3300005345 Bacteria 1331
16 Ga0070668_101088657 3300005347 Unclassified 721
17 Ga0070669_100295941 3300005353 Bacteria 1301
18 Ga0070674_100206538 3300005356 Bacteria 1520
19 Ga0070674_100453244 3300005356 Unclassified 1059
20 Ga0070673_100194023 3300005364 Bacteria 1746
21 Ga0070673_100288220 3300005364 Unclassified 1442
22 Ga0070673_100759873 3300005364 Unclassified 893
23 Ga0070688_100003022 3300005365 Bacteria 8585
24 Ga0070659_100393996 3300005366 Bacteria 1168
25 Ga0070667_100138071 3300005367 Unclassified 2132
26 Ga0070667_100337608 3300005367 Bacteria 1362
27 Ga0070667_100374551 3300005367 Bacteria 1292
28 Ga0070701_10064117 3300005438 Unclassified 1946
29 Ga0070701_10076544 3300005438 Bacteria 1801
30 Ga0070705_100333524 3300005440 Bacteria 1100
31 Ga0070700_100237878 3300005441 Bacteria 1299
32 Ga0070700_100361539 3300005441 Unclassified 1079
33 Ga0070694_100115903 3300005444 Bacteria 1915
34 Ga0070694_100247337 3300005444 Bacteria 1348
35 Ga0070694_100415646 3300005444 Unclassified 1056
36 Ga0070708_100004198 3300005445 Bacteria 11319
37 Ga0070678_100271801 3300005456 Unclassified 1430
38 Ga0070678_100334904 3300005456 Unclassified 1296
39 Ga0070681_10009777 3300005458 Bacteria 9437
40 Ga0070681_10376657 3300005458 Unclassified 1330
41 Ga0068867_100034682 3300005459 Unclassified 3659
42 Ga0068867_100306218 3300005459 Bacteria 1312
43 Ga0070685_10116577 3300005466 Unclassified 1653
44 Ga0070685_10244355 3300005466 Bacteria 1186
45 Ga0070699_100190495 3300005518 Bacteria 1822
46 Ga0070679_100020230 3300005530 Bacteria 6487
47 Ga0070684_100158541 3300005535 Unclassified 2052
48 Ga0070684_100622015 3300005535 Unclassified 1004
49 Ga0068853_100874465 3300005539 Bacteria 863
50 Ga0070672_100160533 3300005543 Bacteria 1864
51 Ga0070686_100193776 3300005544 Unclassified 1452
52 Ga0070686_100292959 3300005544 Bacteria 1204
53 Ga0070695_100110445 3300005545 Bacteria 1865
54 Ga0070695_100389688 3300005545 Unclassified 1053
55 Ga0070696_100095556 3300005546 Bacteria 2122
56 Ga0070696_100523394 3300005546 Bacteria 946
57 Ga0070665_100257055 3300005548 Bacteria 1748
58 Ga0070704_100016136 3300005549 Bacteria 4713
59 Ga0070704_100062897 3300005549 Viruses 2662
60 Ga0070704_100234159 3300005549 Unclassified 1500
61 Ga0070664_100791958 3300005564 Unclassified 886
62 Ga0068857_100513493 3300005577 Bacteria 1126
63 Ga0068854_100296410 3300005578 Bacteria 1307
64 Ga0068854_100607602 3300005578 Bacteria 934
65 Ga0068856_100288660 3300005614 Bacteria 1657
66 Ga0068856_100375100 3300005614 Unclassified 1441
67 Ga0070702_100202605 3300005615 Bacteria 1315
68 Ga0068859_100022841 3300005617 Bacteria 6271
69 Ga0068859_100027098 3300005617 Bacteria 5749
70 Ga0068859_100453980 3300005617 Bacteria 1378
71 Ga0068864_100506872 3300005618 Bacteria 1162
72 Ga0068861_100401237 3300005719 Bacteria 1217
73 Ga0068870_10233111 3300005840 Bacteria 1133
74 Ga0068870_10336923 3300005840 Unclassified 963
75 Ga0068863_100092873 3300005841 Unclassified 2863
76 Ga0068858_100488471 3300005842 Bacteria 1189
77 Ga0068860_100566775 3300005843 Bacteria 1139
78 Ga0068860_100606219 3300005843 Bacteria 1101
79 Ga0068860_101601261 3300005843 Unclassified 673
80 Ga0070715_10438117 3300006163 Unclassified 735
81 Ga0075369_10198984 3300006186 Bacteria 924
82 Ga0097621_100002804 3300006237 Bacteria 11934
83 Ga0097621_100493040 3300006237 Bacteria 1109
84 Ga0097621_100880378 3300006237 Bacteria 833
85 Ga0068871_100025557 3300006358 Bacteria 4596
86 Ga0068871_100312075 3300006358 Bacteria 1383
87 Ga0075428_100311418 3300006844 Bacteria 1692
88 Ga0075428_101011347 3300006844 Unclassified 880
89 Ga0075431_100480997 3300006847 Bacteria 1234
90 Ga0075431_101069247 3300006847 Bacteria 772
91 Ga0075433_10079020 3300006852 Bacteria 2899
92 Ga0075433_10583415 3300006852 Bacteria 982
93 Ga0075429_100254476 3300006880 Unclassified 1538
94 Ga0068865_100224335 3300006881 Bacteria 1471
95 Ga0097620_100022843 3300006931 Bacteria 6271
96 Ga0097620_100027099 3300006931 Bacteria 5749
97 Ga0097620_100454010 3300006931 Bacteria 1378
98 Ga0075435_100361303 3300007076 Bacteria 1245
99 Ga0105240_10062904 3300009093 Bacteria 4619
100 Ga0105240_10085345 3300009093 Bacteria 3868
101 Ga0105240_10869957 3300009093 Unclassified 971
102 Ga0111539_10463151 3300009094 Bacteria 1476
103 Ga0111539_11447276 3300009094 Unclassified 797
104 Ga0105245_10034029 3300009098 Bacteria 4517
105 Ga0105245_10398535 3300009098 Unclassified 1375
106 Ga0105247_10157981 3300009101 Bacteria 1499
107 Ga0114129_10080693 3300009147 Bacteria 4522
108 Ga0114129_11624963 3300009147 Bacteria 790
109 Ga0105243_10292276 3300009148 Bacteria 1473
110 Ga0105241_10080628 3300009174 Bacteria 2548
111 Ga0105242_10040596 3300009176 Bacteria 3750
112 Ga0105242_10412036 3300009176 Bacteria 1264
113 Ga0105248_10012145 3300009177 Bacteria 9500
114 Ga0105248_10084199 3300009177 Bacteria 3577
115 Ga0105248_10088044 3300009177 Unclassified 3495
116 Ga0105248_10470962 3300009177 Unclassified 1416
117 Ga0105248_10830536 3300009177 Bacteria 1043
118 Ga0105237_10019896 3300009545 Bacteria 6929
119 Ga0105249_10053387 3300009553 Bacteria 3694
120 Ga0105239_10074669 3300010375 Bacteria 3727
121 Ga0105239_10193008 3300010375 Unclassified 2280
122 Ga0105239_10266520 3300010375 Bacteria 1926
123 Ga0105239_10654735 3300010375 Bacteria 1200
124 Ga0105246_10421260 3300011119 Unclassified 1114
125 Ga0105246_10425592 3300011119 Bacteria 1109
126 Ga0105246_10661611 3300011119 Unclassified 911
127 Ga0157373_10083911 3300013100 Bacteria 2245
128 Ga0157370_10005641 3300013104 Bacteria 14001
129 Ga0157370_10273781 3300013104 Bacteria 1560
130 Ga0157378_10281353 3300013297 Bacteria 1603
131 Ga0157378_10566089 3300013297 Bacteria 1144
132 Ga0157378_10692662 3300013297 Unclassified 1038
133 Ga0163162_10204513 3300013306 Unclassified 2104
134 Ga0157372_10282990 3300013307 Bacteria 1928
135 Ga0157372_10507636 3300013307 Bacteria 1406
136 Ga0157375_10033536 3300013308 Bacteria 4879
137 Ga0157375_10069394 3300013308 Unclassified 3531
138 Ga0157375_10301242 3300013308 Bacteria 1767
139 Ga0157375_10304810 3300013308 Bacteria 1757
140 Ga0163163_10020705 3300014325 Bacteria 6199
141 Ga0163163_10078108 3300014325 Bacteria 3306
142 Ga0157380_10115894 3300014326 Bacteria 2260
143 Ga0157380_10340839 3300014326 Viruses 1398
144 Ga0157380_10406656 3300014326 Bacteria 1293
145 Ga0157377_10162076 3300014745 Bacteria 1392
146 Ga0157379_10074089 3300014968 Bacteria 3047
147 Ga0157379_10297168 3300014968 Bacteria 1471
148 Ga0157379_10344184 3300014968 Unclassified 1364
149 Ga0157379_10552286 3300014968 Bacteria 1072
150 Ga0157376_10000398 3300014969 Bacteria 28302
151 Ga0163161_10501309 3300017792 Unclassified 989
152 Ga0207643_10408737 3300025908 Bacteria 859
153 Ga0207654_10372770 3300025911 Bacteria 987
154 Ga0207707_10006516 3300025912 Bacteria 10193
155 Ga0207695_10184962 3300025913 Bacteria 2003
156 Ga0207695_10375085 3300025913 Bacteria 1309
157 Ga0207671_10030505 3300025914 Bacteria 4021
158 Ga0207660_10055652 3300025917 Bacteria 2828
159 Ga0207660_10695913 3300025917 Bacteria 829
160 Ga0207662_10311355 3300025918 Unclassified 1049
161 Ga0207652_10009460 3300025921 Bacteria 7835
162 Ga0207646_10252839 3300025922 Bacteria 1592
163 Ga0207650_10017446 3300025925 Bacteria 5028
164 Ga0207650_10080695 3300025925 Bacteria 2467
165 Ga0207659_10025277 3300025926 Bacteria 3989
166 Ga0207659_10287301 3300025926 Bacteria 1346
167 Ga0207687_10225463 3300025927 Unclassified 1478
168 Ga0207706_10473107 3300025933 Unclassified 1083
169 Ga0207686_10236426 3300025934 Bacteria 1327
170 Ga0207709_10119161 3300025935 Bacteria 1779
171 Ga0207669_10803155 3300025937 Unclassified 780
172 Ga0207704_10035667 3300025938 Unclassified 2853
173 Ga0207704_10657335 3300025938 Unclassified 864
174 Ga0207691_10500376 3300025940 Bacteria 1032
175 Ga0207691_10550237 3300025940 Bacteria 978
176 Ga0207691_11006299 3300025940 Unclassified 695
177 Ga0207711_10026742 3300025941 Bacteria 4843
178 Ga0207689_10076657 3300025942 Unclassified 2748
179 Ga0207689_10233270 3300025942 Bacteria 1521
180 Ga0207667_10328184 3300025949 Bacteria 1562
181 Ga0207667_10462984 3300025949 Unclassified 1288
182 Ga0207651_10084078 3300025960 Unclassified 2304
183 Ga0207651_10583048 3300025960 Unclassified 976
184 Ga0207712_10552013 3300025961 Bacteria 991
185 Ga0207668_10470424 3300025972 Bacteria 1076
186 Ga0207640_10861717 3300025981 Bacteria 789
187 Ga0207658_10138715 3300025986 Unclassified 1965
188 Ga0207677_11327949 3300026023 Unclassified 661
189 Ga0207703_10354498 3300026035 Unclassified 1352
190 Ga0207639_10214154 3300026041 Bacteria 1660
191 Ga0207708_10245668 3300026075 Bacteria 1441
192 Ga0207708_10507753 3300026075 Unclassified 1011
193 Ga0207702_10171571 3300026078 Unclassified 1989
194 Ga0207702_11338606 3300026078 Bacteria 710
195 Ga0207641_10070603 3300026088 Unclassified 3001
196 Ga0207648_10024088 3300026089 Bacteria 5439
197 Ga0207648_10337001 3300026089 Bacteria 1358
198 Ga0207676_10072782 3300026095 Bacteria 2764
199 Ga0207676_10348570 3300026095 Bacteria 1369
200 Ga0207674_10336776 3300026116 Bacteria 1459
201 Ga0207675_100074455 3300026118 Bacteria 3177
202 Ga0207675_100775128 3300026118 Unclassified 971
203 Ga0207675_100790959 3300026118 Bacteria 961
204 Ga0207698_10264589 3300026142 Bacteria 1582
205 Ga0268266_10526060 3300028379 Unclassified 1131
206 Ga0268264_10999967 3300028381 Unclassified 843
207 Ga0265339_10152779 3300031249 Unclassified 1166
208 Ga0373934_0272782 3300035086 Unclassified 700
209 Ga0373944_0055849 3300035089 Bacteria 1255
210 Ga0373923_0082686 3300035111 Bacteria 1395
211 Ga0373932_0108253 3300035112 Unclassified 913
212 Ga0373956_0064201 3300035119 Bacteria 1667
213 Ga0373955_0092923 3300035172 Bacteria 1722
214 Ga0373955_0097070 3300035172 Bacteria 1687
215 Ga0373924_0177104 3300035410 Unclassified 938
216 Ga0373924_0289970 3300035410 Bacteria 726
217 Ga0373933_0068679 3300035724 Bacteria 2153
218 Ga0373933_0630647 3300035724 Bacteria 704
219 Ga0373937_0048825 3300036401 Bacteria 3875
220 Ga0373937_0132531 3300036401 Unclassified 2328
221 Ga0373937_1326121 3300036401 Unclassified 668
222 Ga0373925_0468629 3300037068 Bacteria 1033
223 Ga0373925_0583835 3300037068 Unclassified 920
224 Ga0451577_1021291 3300042876 Bacteria 742
225 Ga0451576_0112022 3300045051 Bacteria 2840
226 Ga0451576_0278988 3300045051 Bacteria 1747
227 Ga0451576_0669924 3300045051 Bacteria 1090
228 Ga0495592_0147351 3300046454 Bacteria 1631
229 Ga0495629_0467583 3300046459 Unclassified 853
230 Ga0495580_0265861 3300046472 Bacteria 1172
231 Ga0495580_0899399 3300046472 Bacteria 569
232 Ga0495582_0091717 3300046473 Bacteria 1694
233 Ga0495582_0153184 3300046473 Bacteria 1309
234 Ga0495582_0250524 3300046473 Bacteria 1016
235 Ga0495662_0152505 3300046476 Bacteria 1138
236 Ga0495664_0106491 3300046477 Bacteria 1691
237 Ga0495664_0528790 3300046477 Bacteria 703
238 Ga0495618_0041993 3300046514 Unclassified 2882
239 Ga0495628_0874368 3300046516 Unclassified 625
240 Ga0495630_0969135 3300046517 Unclassified 647
241 Ga0495652_0350049 3300046529 Bacteria 1059
242 Ga0495640_0060290 3300046533 Unclassified 2581
243 Ga0495640_0131327 3300046533 Bacteria 1621
244 Ga0495586_0075993 3300046535 Bacteria 1840
245 Ga0495586_0285585 3300046535 Bacteria 945
246 Ga0495587_0551748 3300046536 Unclassified 636
247 Ga0495621_0126305 3300046539 Bacteria 992
248 Ga0495645_0030062 3300046543 Bacteria 3957
249 Ga0495634_0088979 3300046642 Bacteria 2008
250 Ga0495657_0279297 3300046675 Bacteria 1000
251 Ga0495599_0100591 3300046678 Unclassified 1802
252 Ga0495623_0342709 3300046679 Unclassified 816
253 Ga0495658_0271892 3300046683 Bacteria 1068
254 Ga0495658_0798472 3300046683 Bacteria 604
255 Ga0495613_0121306 3300046689 Bacteria 1877
256 Ga0495613_0237019 3300046689 Bacteria 1277
257 Ga0495600_0144091 3300046809 Unclassified 1545
258 Ga0495581_0227600 3300047315 Bacteria 1091
259 Ga0495674_0048891 3300047319 Bacteria 3740
260 Ga0495674_0465560 3300047319 Unclassified 1014
261 Ga0495680_0387765 3300047322 Unclassified 967
262 Ga0495680_0529688 3300047322 Bacteria 796
263 Ga0495684_0220176 3300047471 Bacteria 1392
264 Ga0495684_0343773 3300047471 Unclassified 1061
265 Ga0495684_0542007 3300047471 Unclassified 794
266 Ga0496104_0625947 3300048907 Unclassified 986
267 Ga0496105_0553977 3300048908 Unclassified 897
268 Ga0496110_0270241 3300048913 Bacteria 1548
269 Ga0501039_0031175 3300049575 Bacteria 4110
270 Ga0501040_0017173 3300049576 Bacteria 4803
271 Ga0501042_0227749 3300049578 Bacteria 1344
272 Ga0501043_0519758 3300049579 Bacteria 887
273 Ga0501046_0059005 3300049580 Bacteria 3007
274 Ga0501048_0073591 3300049582 Bacteria 2411
275 Ga0501071_0035003 3300049587 Bacteria 3576
276 Ga0501071_0737867 3300049587 Unclassified 759
277 Ga0501072_0004121 3300049588 Bacteria 11002
278 Ga0501075_0021628 3300049591 Bacteria 4691
279 Ga0501076_0006375 3300049592 Bacteria 8557
280 Ga0501077_0002512 3300049593 Bacteria 10983
281 Ga0501079_0033080 3300049741 Bacteria 3976
282 Ga0501079_0262657 3300049741 Bacteria 1349
283 Ga0501080_0024095 3300049742 Bacteria 5642
284 Ga0501080_0709278 3300049742 Bacteria 887
285 Ga0501081_0007738 3300049743 Bacteria 6966
286 Ga0501081_0356053 3300049743 Unclassified 1079
287 Ga0501081_0424708 3300049743 Bacteria 986
288 Ga0501044_0318633 3300049823 Bacteria 1480
289 Ga0501045_0009491 3300049824 Bacteria 6810
290 Ga0501045_0629255 3300049824 Unclassified 794
291 nmdc:mga05p37_193666_c1 3300050507 Unclassified 2466
292 nmdc:mga05p37_912507_c1 3300050507 Bacteria 945
293 nmdc:mga09592_73534_c1 3300050508 Bacteria 2904
294 nmdc:mga06r32_1036994_c1 3300050510 Bacteria 771
295 nmdc:mga0a205_740652_c1 3300050515 Bacteria 832
296 Ga0495601_0339131 3300053077 Bacteria 978
297 Ga0495601_0424033 3300053077 Unclassified 862
298 Ga0501084_0009846 3300054114 Bacteria 7899
299 Ga0501084_1339984 3300054114 Bacteria 600
300 Ga0501082_0012119 3300060353 Bacteria 7408
301 Ga0530510_0025331 3300061734 Bacteria 4241
302 Ga0070690_100521100
303 MBSR1b_contig_2184876
304 Ga0065712_10202377
305 Ga0070690_100254255
306 Ga0070670_100118516
307 Ga0068869_100280618
308 Ga0070666_10571933
309 Ga0070680_100010331
310 Ga0068868_101406343
311 Ga0070689_100395844
312 Ga0070689_100466946
313 Ga0070691_10165148
314 Ga0070687_100177589
315 Ga0070661_100415751
316 Ga0070692_10148856
317 Ga0070668_101088657
318 Ga0070669_100295941
319 Ga0070674_100206538
320 Ga0070674_100453244
321 Ga0070673_100194023
322 Ga0070673_100288220
323 Ga0070673_100759873
324 Ga0070688_100003022
325 Ga0070659_100393996
326 Ga0070667_100138071
327 Ga0070667_100337608
328 Ga0070667_100374551
329 Ga0070701_10064117
330 Ga0070701_10076544
331 Ga0070705_100333524
332 Ga0070700_100237878
333 Ga0070700_100361539
334 Ga0070694_100115903
335 Ga0070694_100247337
336 Ga0070694_100415646
337 Ga0070708_100004198
338 Ga0070678_100271801
339 Ga0070678_100334904
340 Ga0070681_10009777
341 Ga0070681_10376657
342 Ga0068867_100034682
343 Ga0068867_100306218
344 Ga0070685_10116577
345 Ga0070685_10244355
346 Ga0070699_100190495
347 Ga0070679_100020230
348 Ga0070684_100158541
349 Ga0070684_100622015
350 Ga0068853_100874465
351 Ga0070672_100160533
352 Ga0070686_100193776
353 Ga0070686_100292959
354 Ga0070695_100110445
355 Ga0070695_100389688
356 Ga0070696_100095556
357 Ga0070696_100523394
358 Ga0070665_100257055
359 Ga0070704_100016136
360 Ga0070704_100062897
361 Ga0070704_100234159
362 Ga0070664_100791958
363 Ga0068857_100513493
364 Ga0068854_100296410
365 Ga0068854_100607602
366 Ga0068856_100288660
367 Ga0068856_100375100
368 Ga0070702_100202605
369 Ga0068859_100022841
370 Ga0068859_100027098
371 Ga0068859_100453980
372 Ga0068864_100506872
373 Ga0068861_100401237
374 Ga0068870_10233111
375 Ga0068870_10336923
376 Ga0068863_100092873
377 Ga0068858_100488471
378 Ga0068860_100566775
379 Ga0068860_100606219
380 Ga0068860_101601261
381 Ga0070715_10438117
382 Ga0075369_10198984
383 Ga0097621_100002804
384 Ga0097621_100493040
385 Ga0097621_100880378
386 Ga0068871_100025557
387 Ga0068871_100312075
388 Ga0075428_100311418
389 Ga0075428_101011347
390 Ga0075431_100480997
391 Ga0075431_101069247
392 Ga0075433_10079020
393 Ga0075433_10583415
394 Ga0075429_100254476
395 Ga0068865_100224335
396 Ga0097620_100022843
397 Ga0097620_100027099
398 Ga0097620_100454010
399 Ga0075435_100361303
400 Ga0105240_10062904
401 Ga0105240_10085345
402 Ga0105240_10869957
403 Ga0111539_10463151
404 Ga0111539_11447276
405 Ga0105245_10034029
406 Ga0105245_10398535
407 Ga0105247_10157981
408 Ga0114129_10080693
409 Ga0114129_11624963
410 Ga0105243_10292276
411 Ga0105241_10080628
412 Ga0105242_10040596
413 Ga0105242_10412036
414 Ga0105248_10012145
415 Ga0105248_10084199
416 Ga0105248_10088044
417 Ga0105248_10470962
418 Ga0105248_10830536
419 Ga0105237_10019896
420 Ga0105249_10053387
421 Ga0105239_10074669
422 Ga0105239_10193008
423 Ga0105239_10266520
424 Ga0105239_10654735
425 Ga0105246_10421260
426 Ga0105246_10425592
427 Ga0105246_10661611
428 Ga0157373_10083911
429 Ga0157370_10005641
430 Ga0157370_10273781
431 Ga0157378_10281353
432 Ga0157378_10566089
433 Ga0157378_10692662
434 Ga0163162_10204513
435 Ga0157372_10282990
436 Ga0157372_10507636
437 Ga0157375_10033536
438 Ga0157375_10069394
439 Ga0157375_10301242
440 Ga0157375_10304810
441 Ga0163163_10020705
442 Ga0163163_10078108
443 Ga0157380_10115894
444 Ga0157380_10340839
445 Ga0157380_10406656
446 Ga0157377_10162076
447 Ga0157379_10074089
448 Ga0157379_10297168
449 Ga0157379_10344184
450 Ga0157379_10552286
451 Ga0157376_10000398
452 Ga0163161_10501309
453 Ga0207643_10408737
454 Ga0207654_10372770
455 Ga0207707_10006516
456 Ga0207695_10184962
457 Ga0207695_10375085
458 Ga0207671_10030505
459 Ga0207660_10055652
460 Ga0207660_10695913
461 Ga0207662_10311355
462 Ga0207652_10009460
463 Ga0207646_10252839
464 Ga0207650_10017446
465 Ga0207650_10080695
466 Ga0207659_10025277
467 Ga0207659_10287301
468 Ga0207687_10225463
469 Ga0207706_10473107
470 Ga0207686_10236426
471 Ga0207709_10119161
472 Ga0207669_10803155
473 Ga0207704_10035667
474 Ga0207704_10657335
475 Ga0207691_10500376
476 Ga0207691_10550237
477 Ga0207691_11006299
478 Ga0207711_10026742
479 Ga0207689_10076657
480 Ga0207689_10233270
481 Ga0207667_10328184
482 Ga0207667_10462984
483 Ga0207651_10084078
484 Ga0207651_10583048
485 Ga0207712_10552013
486 Ga0207668_10470424
487 Ga0207640_10861717
488 Ga0207658_10138715
489 Ga0207677_11327949
490 Ga0207703_10354498
491 Ga0207639_10214154
492 Ga0207708_10245668
493 Ga0207708_10507753
494 Ga0207702_10171571
495 Ga0207702_11338606
496 Ga0207641_10070603
497 Ga0207648_10024088
498 Ga0207648_10337001
499 Ga0207676_10072782
500 Ga0207676_10348570
501 Ga0207674_10336776
502 Ga0207675_100074455
503 Ga0207675_100775128
504 Ga0207675_100790959
505 Ga0207698_10264589
506 Ga0268266_10526060
507 Ga0268264_10999967
508 Ga0265339_10152779
509 Ga0373934_0272782
510 Ga0373944_0055849
511 Ga0373923_0082686
512 Ga0373932_0108253
513 Ga0373956_0064201
514 Ga0373955_0092923
515 Ga0373955_0097070
516 Ga0373924_0177104
517 Ga0373924_0289970
518 Ga0373933_0068679
519 Ga0373933_0630647
520 Ga0373937_0048825
521 Ga0373937_0132531
522 Ga0373937_1326121
523 Ga0373925_0468629
524 Ga0373925_0583835
525 Ga0451577_1021291
526 Ga0451576_0112022
527 Ga0451576_0278988
528 Ga0451576_0669924
529 Ga0495592_0147351
530 Ga0495629_0467583
531 Ga0495580_0265861
532 Ga0495580_0899399
533 Ga0495582_0091717
534 Ga0495582_0153184
535 Ga0495582_0250524
536 Ga0495662_0152505
537 Ga0495664_0106491
538 Ga0495664_0528790
539 Ga0495618_0041993
540 Ga0495628_0874368
541 Ga0495630_0969135
542 Ga0495652_0350049
543 Ga0495640_0060290
544 Ga0495640_0131327
545 Ga0495586_0075993
546 Ga0495586_0285585
547 Ga0495587_0551748
548 Ga0495621_0126305
549 Ga0495645_0030062
550 Ga0495634_0088979
551 Ga0495657_0279297
552 Ga0495599_0100591
553 Ga0495623_0342709
554 Ga0495658_0271892
555 Ga0495658_0798472
556 Ga0495613_0121306
557 Ga0495613_0237019
558 Ga0495600_0144091
559 Ga0495581_0227600
560 Ga0495674_0048891
561 Ga0495674_0465560
562 Ga0495680_0387765
563 Ga0495680_0529688
564 Ga0495684_0220176
565 Ga0495684_0343773
566 Ga0495684_0542007
567 Ga0496104_0625947
568 Ga0496105_0553977
569 Ga0496110_0270241
570 Ga0501039_0031175
571 Ga0501040_0017173
572 Ga0501042_0227749
573 Ga0501043_0519758
574 Ga0501046_0059005
575 Ga0501048_0073591
576 Ga0501071_0035003
577 Ga0501071_0737867
578 Ga0501072_0004121
579 Ga0501075_0021628
580 Ga0501076_0006375
581 Ga0501077_0002512
582 Ga0501079_0033080
583 Ga0501079_0262657
584 Ga0501080_0024095
585 Ga0501080_0709278
586 Ga0501081_0007738
587 Ga0501081_0356053
588 Ga0501081_0424708
589 Ga0501044_0318633
590 Ga0501045_0009491
591 Ga0501045_0629255
592 nmdc:mga05p37_193666_c1
593 nmdc:mga05p37_912507_c1
594 nmdc:mga09592_73534_c1
595 nmdc:mga06r32_1036994_c1
596 nmdc:mga0a205_740652_c1
597 Ga0495601_0339131
598 Ga0495601_0424033
599 Ga0501084_0009846
600 Ga0501084_1339984
601 Ga0501082_0012119
602 Ga0530510_0025331

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04545

Sigma70_r4

Sigma-70, region 4

148

197

0.98

PF08281

Sigma70_r4_2

Sigma-70, region 4

142

195

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
2o8x-assembly1.cif.gz_A "crystal structure of the ""-35 element"" promoter recognition domain of mycobacterium tuberculosis sigc" 0.9869 132 183
3hug-assembly2.cif.gz_E crystal structure of mycobacterium tuberculosis anti-sigma factor rsla in complex with -35 promoter binding domain of sigl 0.9819 131 187
4go1-assembly1.cif.gz_A-2 crystal structure of full length transcription repressor lsrr from e. coli. 0.9796 142 177
3hug-assembly6.cif.gz_A crystal structure of mycobacterium tuberculosis anti-sigma factor rsla in complex with -35 promoter binding domain of sigl 0.9786 131 187
3hug-assembly1.cif.gz_C crystal structure of mycobacterium tuberculosis anti-sigma factor rsla in complex with -35 promoter binding domain of sigl 0.9719 131 187
ID Description Score Start End Superfamily
2o8xA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9869 132 183 1.10.10.10
4l5jB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9857 142 178 1.10.10.10
1or7B02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9833 131 185 1.10.10.10
4l5jD01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.98 142 181 1.10.10.10
3hugA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9786 131 187 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A7C4EA99-F1-model_v4 Sigma-70 family RNA polymerase sigma factor 0.5726 5 186 GO:0006352
GO:0016987
AF-A0A7S7SJ90-F1-model_v4 Sigma-70 family RNA polymerase sigma factor 0.5695 12 187 GO:0003677
GO:0006352
GO:0016987
AF-A0A3N5NPQ4-F1-model_v4 Sigma-70 family RNA polymerase sigma factor 0.5618 12 187 GO:0003677
GO:0006352
GO:0016987
AF-A0A354X398-F1-model_v4 RNA polymerase sigma-70 factor 0.5591 12 175 GO:0003677
GO:0006352
GO:0016987
AF-A0A7R8ATZ3-F1-model_v4 deleted 0.552 9 193

Map