F395326

General Info

Members Datasets Scaffolds Average Seq Length
300 175 600 486

Family's Representative Sequence

Representative Sequence 3300009094|Ga0111539_10085795|Ga0111539_100857953
Length 540
Sequence LIRAGTDGLLPCISFDSVRIRPARGFANLAVSATRIAPERCPATAGQTSREMPAPRVRFAPSPTGYLHVGGARTALFNWLLARKLGGVFVLRIEDTDVERSSEDMVEGILDGLRWLGLDWDEGPKIDGPHGPYFQSQRLDRYRAMAAGLVATGHAYYCYCSPDDLKAKREAAEAAGSAWRYDRTCCALTADEIAARERDGVARAIRFRVPEGKTAFDDLVHGPIEFDGANIEDFVLLRSDGHPTYQLSVVSDDVEMKITHVVRGDDHISNTPKQILLYRALGAEVPKFAHVPLILGQDKKRLSKRHGATSVSEYARQGYLPEAMFNFLALLGWSPGDDREIMTRDELVTAFSLEAISGGNAVFNTEKLDWFNQQHTMRLAPDELARRLKPWFEQRGIWRDEYLGERHAWFFAVLELLKPRAKRLDEFVALGWFFWSDAIDYDAAAVEKHLRAPDMDGHLHAVEEAIARTESFSAPDLEVALRNTAEARGVKAASLIHAVRVATTGKTVSPGLFEVLALLGRMRVRNRFDAARRLLLTTGS

Samples

Sample ID Description Type Environment
1 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
23 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
24 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
25 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
26 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
27 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
28 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
29 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
30 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
31 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
32 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
33 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
34 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
35 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
36 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
37 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
38 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
39 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
40 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
41 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
42 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
43 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
44 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
45 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
46 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
47 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
48 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
49 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
50 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
51 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
52 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
53 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
54 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
55 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
57 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
58 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
59 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
60 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
61 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
62 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
63 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
64 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
65 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
66 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
67 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
68 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
69 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
70 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
71 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
72 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
73 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
74 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
75 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
76 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
77 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
78 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
79 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
80 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
81 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
82 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
83 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
84 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
128 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
129 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
131 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
132 3300030879 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
133 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
134 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
135 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
136 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
137 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
138 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
139 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
140 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
141 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
142 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
143 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
144 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
145 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
146 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
147 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
148 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
149 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
150 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
151 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
152 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
153 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
154 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
155 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
156 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
164 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
165 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
166 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
167 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
168 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
169 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
170 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
171 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
172 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
173 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
174 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
175 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99
Metatranscriptomes 1
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.33
Rhizosphere 98.33
Stem 0
Stem Tuber 0
Unclassified 1

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0111539_10085795 3300009094 Bacteria 3700
2 rootH2_10000244 3300003320 Bacteria 697651
3 Ga0065712_10077694 3300005290 Bacteria 3456
4 Ga0065707_10087357 3300005295 Bacteria 5061
5 Ga0065707_10087732 3300005295 Bacteria 4911
6 Ga0070658_10022045 3300005327 Bacteria 5110
7 Ga0070658_10082707 3300005327 Bacteria 2639
8 Ga0070676_10004181 3300005328 Bacteria 7576
9 Ga0070683_100030901 3300005329 Bacteria 4866
10 Ga0070677_10000471 3300005333 Bacteria 13777
11 Ga0070677_10001165 3300005333 Bacteria 8439
12 Ga0070680_100017573 3300005336 Bacteria 5641
13 Ga0068868_100073385 3300005338 Bacteria 2732
14 Ga0070689_100090375 3300005340 Bacteria 2412
15 Ga0070691_10014760 3300005341 Bacteria 3586
16 Ga0070687_100029878 3300005343 Bacteria 2659
17 Ga0070661_100014623 3300005344 Bacteria 5533
18 Ga0070692_10012759 3300005345 Bacteria 3901
19 Ga0070669_100019355 3300005353 Bacteria 4862
20 Ga0070669_100044367 3300005353 Bacteria 3239
21 Ga0070669_100142425 3300005353 Bacteria 1849
22 Ga0070675_100005901 3300005354 Bacteria 9380
23 Ga0070675_100107539 3300005354 Bacteria 2355
24 Ga0070671_100035053 3300005355 Bacteria 4157
25 Ga0070673_100092604 3300005364 Bacteria 2473
26 Ga0070688_100037071 3300005365 Bacteria 2969
27 Ga0070667_100006740 3300005367 Bacteria 9540
28 Ga0070667_100041929 3300005367 Bacteria 3839
29 Ga0070667_100132884 3300005367 Bacteria 2173
30 Ga0070703_10006938 3300005406 Bacteria 3175
31 Ga0070709_10003273 3300005434 Bacteria 8708
32 Ga0070700_100013091 3300005441 Bacteria 4652
33 Ga0070694_100000216 3300005444 Bacteria 30198
34 Ga0070694_100003113 3300005444 Bacteria 9883
35 Ga0070694_100040140 3300005444 Unclassified 3119
36 Ga0070694_100093510 3300005444 Bacteria 2114
37 Ga0070708_100020244 3300005445 Bacteria 5608
38 Ga0070708_100044193 3300005445 Bacteria 3916
39 Ga0070708_100050238 3300005445 Bacteria 3691
40 Ga0070678_100049043 3300005456 Bacteria 3045
41 Ga0070678_100168008 3300005456 Bacteria 1783
42 Ga0070662_100096689 3300005457 Bacteria 2228
43 Ga0068867_100072464 3300005459 Bacteria 2578
44 Ga0070685_10032938 3300005466 Bacteria 2906
45 Ga0070698_100002272 3300005471 Bacteria 21265
46 Ga0070699_100000291 3300005518 Bacteria 48229
47 Ga0070699_100001937 3300005518 Bacteria 18686
48 Ga0070699_100015031 3300005518 Bacteria 6652
49 Ga0070679_100015096 3300005530 Bacteria 7422
50 Ga0070679_100015803 3300005530 Bacteria 7261
51 Ga0070684_100020547 3300005535 Bacteria 5477
52 Ga0070684_100076924 3300005535 Bacteria 2946
53 Ga0070697_100053142 3300005536 Bacteria 3292
54 Ga0070672_100028335 3300005543 Bacteria 4188
55 Ga0070686_100027380 3300005544 Bacteria 3450
56 Ga0070686_100041815 3300005544 Bacteria 2867
57 Ga0070695_100031119 3300005545 Bacteria 3325
58 Ga0070696_100033151 3300005546 Bacteria 3547
59 Ga0070696_100178988 3300005546 Bacteria 1572
60 Ga0070665_100006452 3300005548 Bacteria 11937
61 Ga0070704_100115557 3300005549 Bacteria 2050
62 Ga0068855_100003705 3300005563 Bacteria 18684
63 Ga0068855_100128500 3300005563 Bacteria 2895
64 Ga0070664_100003261 3300005564 Bacteria 13104
65 Ga0068857_100241579 3300005577 Bacteria 1654
66 Ga0068854_100046081 3300005578 Bacteria 3103
67 Ga0068859_100065772 3300005617 Bacteria 3659
68 Ga0068864_100013191 3300005618 Bacteria 6842
69 Ga0068864_100016349 3300005618 Bacteria 6176
70 Ga0068864_100111180 3300005618 Bacteria 2441
71 Ga0068864_100235069 3300005618 Bacteria 1696
72 Ga0068866_10023455 3300005718 Bacteria 2872
73 Ga0068861_100039328 3300005719 Bacteria 3528
74 Ga0068861_100059738 3300005719 Bacteria 2920
75 Ga0068861_100069777 3300005719 Bacteria 2719
76 Ga0068870_10011090 3300005840 Bacteria 4164
77 Ga0068870_10016694 3300005840 Bacteria 3514
78 Ga0068863_100018445 3300005841 Bacteria 6678
79 Ga0068863_100021248 3300005841 Bacteria 6195
80 Ga0068863_100144770 3300005841 Bacteria 2272
81 Ga0068858_100049135 3300005842 Bacteria 3907
82 Ga0068858_100049425 3300005842 Bacteria 3895
83 Ga0068858_100103931 3300005842 Bacteria 2650
84 Ga0068860_100024317 3300005843 Bacteria 5854
85 Ga0068860_100107705 3300005843 Bacteria 2663
86 Ga0068862_100022447 3300005844 Bacteria 5279
87 Ga0097621_100097571 3300006237 Bacteria 2468
88 Ga0068871_100009939 3300006358 Bacteria 6910
89 Ga0075430_100011644 3300006846 Bacteria 7483
90 Ga0075430_100134400 3300006846 Bacteria 2061
91 Ga0075431_100039287 3300006847 Bacteria 4875
92 Ga0075431_100096317 3300006847 Bacteria 3055
93 Ga0075431_100178606 3300006847 Bacteria 2179
94 Ga0075433_10005856 3300006852 Bacteria 9682
95 Ga0075433_10013462 3300006852 Bacteria 6651
96 Ga0075433_10020105 3300006852 Bacteria 5576
97 Ga0075433_10020858 3300006852 Bacteria 5485
98 Ga0075433_10038877 3300006852 Bacteria 4111
99 Ga0075433_10077063 3300006852 Bacteria 2936
100 Ga0075433_10103933 3300006852 Bacteria 2517
101 Ga0075434_100000161 3300006871 Bacteria 42373
102 Ga0075434_100018077 3300006871 Bacteria 6802
103 Ga0075434_100254660 3300006871 Bacteria 1774
104 Ga0075429_100008717 3300006880 Bacteria 8820
105 Ga0068865_100090041 3300006881 Bacteria 2224
106 Ga0075436_100002054 3300006914 Bacteria 13882
107 Ga0075436_100052119 3300006914 Bacteria 2824
108 Ga0097620_100065769 3300006931 Bacteria 3659
109 Ga0075435_100001806 3300007076 Bacteria 13924
110 Ga0075435_100003057 3300007076 Bacteria 11282
111 Ga0105240_10005334 3300009093 Bacteria 19178
112 Ga0105240_10113320 3300009093 Bacteria 3277
113 Ga0111539_10003404 3300009094 Bacteria 20950
114 Ga0111539_10013336 3300009094 Bacteria 10269
115 Ga0111539_10064356 3300009094 Bacteria 4338
116 Ga0111539_10317842 3300009094 Bacteria 1812
117 Ga0105245_10072680 3300009098 Bacteria 3125
118 Ga0105247_10005349 3300009101 Bacteria 8092
119 Ga0114129_10005814 3300009147 Bacteria 17468
120 Ga0114129_10005939 3300009147 Bacteria 17279
121 Ga0114129_10006128 3300009147 Bacteria 17050
122 Ga0114129_10059281 3300009147 Bacteria 5353
123 Ga0114129_10151013 3300009147 Bacteria 3179
124 Ga0114129_10154021 3300009147 Bacteria 3145
125 Ga0114129_10207874 3300009147 Bacteria 2648
126 Ga0114129_10387947 3300009147 Bacteria 1843
127 Ga0114129_10506858 3300009147 Unclassified 1575
128 Ga0105243_10029269 3300009148 Bacteria 4235
129 Ga0105242_10015846 3300009176 Bacteria 5856
130 Ga0105242_10086309 3300009176 Bacteria 2633
131 Ga0105248_10086949 3300009177 Bacteria 3517
132 Ga0105248_10093401 3300009177 Bacteria 3388
133 Ga0105248_10120822 3300009177 Bacteria 2955
134 Ga0105248_10135987 3300009177 Bacteria 2772
135 Ga0105246_10039692 3300011119 Bacteria 3173
136 Ga0157370_10048544 3300013104 Bacteria 4066
137 Ga0157369_10048135 3300013105 Bacteria 4626
138 Ga0163162_10022148 3300013306 Bacteria 6263
139 Ga0157372_10168933 3300013307 Bacteria 2530
140 Ga0157372_10326444 3300013307 Bacteria 1787
141 Ga0157375_10233769 3300013308 Bacteria 1997
142 Ga0163163_10030442 3300014325 Bacteria 5201
143 Ga0163163_10052622 3300014325 Bacteria 4018
144 Ga0163163_10159378 3300014325 Bacteria 2301
145 Ga0157380_10179054 3300014326 Bacteria 1861
146 Ga0157377_10029277 3300014745 Bacteria 2972
147 Ga0157379_10031981 3300014968 Bacteria 4689
148 Ga0157379_10081101 3300014968 Bacteria 2906
149 Ga0157376_10104679 3300014969 Bacteria 2480
150 Ga0207697_10010083 3300025315 Bacteria 4056
151 Ga0207682_10007599 3300025893 Bacteria 4315
152 Ga0207642_10029007 3300025899 Bacteria 2286
153 Ga0207710_10009927 3300025900 Bacteria 4003
154 Ga0207688_10010257 3300025901 Bacteria 5100
155 Ga0207645_10007546 3300025907 Bacteria 7672
156 Ga0207645_10026042 3300025907 Bacteria 3782
157 Ga0207645_10046235 3300025907 Bacteria 2780
158 Ga0207643_10007357 3300025908 Bacteria 5907
159 Ga0207707_10004711 3300025912 Bacteria 11966
160 Ga0207695_10031864 3300025913 Bacteria 5776
161 Ga0207695_10220718 3300025913 Bacteria 1803
162 Ga0207660_10012328 3300025917 Bacteria 5591
163 Ga0207662_10021074 3300025918 Bacteria 3721
164 Ga0207657_10004214 3300025919 Bacteria 15230
165 Ga0207649_10014371 3300025920 Bacteria 4431
166 Ga0207652_10053162 3300025921 Bacteria 3478
167 Ga0207646_10007241 3300025922 Bacteria 11315
168 Ga0207681_10121024 3300025923 Bacteria 1919
169 Ga0207650_10027224 3300025925 Bacteria 4090
170 Ga0207659_10000129 3300025926 Bacteria 44321
171 Ga0207687_10044673 3300025927 Bacteria 3059
172 Ga0207700_10042059 3300025928 Bacteria 3348
173 Ga0207706_10107451 3300025933 Bacteria 2456
174 Ga0207706_10133962 3300025933 Bacteria 2180
175 Ga0207686_10014340 3300025934 Bacteria 4408
176 Ga0207709_10031694 3300025935 Bacteria 3090
177 Ga0207709_10058827 3300025935 Bacteria 2390
178 Ga0207670_10079143 3300025936 Bacteria 2294
179 Ga0207704_10068483 3300025938 Bacteria 2237
180 Ga0207665_10002821 3300025939 Bacteria 11648
181 Ga0207691_10076644 3300025940 Bacteria 3013
182 Ga0207691_10080951 3300025940 Bacteria 2920
183 Ga0207691_10185908 3300025940 Bacteria 1814
184 Ga0207711_10001252 3300025941 Bacteria 24114
185 Ga0207711_10092739 3300025941 Bacteria 2658
186 Ga0207711_10148319 3300025941 Bacteria 2115
187 Ga0207711_10165053 3300025941 Bacteria 2007
188 Ga0207689_10011882 3300025942 Bacteria 7461
189 Ga0207661_10009789 3300025944 Bacteria 6884
190 Ga0207679_10003305 3300025945 Bacteria 9950
191 Ga0207667_10027837 3300025949 Bacteria 6146
192 Ga0207667_10238010 3300025949 Bacteria 1863
193 Ga0207651_10047062 3300025960 Bacteria 2905
194 Ga0207668_10105583 3300025972 Bacteria 2103
195 Ga0207658_10113088 3300025986 Bacteria 2150
196 Ga0207677_10015939 3300026023 Bacteria 4437
197 Ga0207677_10034732 3300026023 Bacteria 3268
198 Ga0207677_10125297 3300026023 Bacteria 1940
199 Ga0207708_10001465 3300026075 Bacteria 17648
200 Ga0207708_10021378 3300026075 Bacteria 4879
201 Ga0207641_10007134 3300026088 Bacteria 9330
202 Ga0207648_10018122 3300026089 Bacteria 6378
203 Ga0207648_10019353 3300026089 Bacteria 6145
204 Ga0207676_10008840 3300026095 Bacteria 7167
205 Ga0207676_10019645 3300026095 Bacteria 4932
206 Ga0207676_10080565 3300026095 Bacteria 2643
207 Ga0207676_10257459 3300026095 Bacteria 1574
208 Ga0207674_10059709 3300026116 Bacteria 3858
209 Ga0207675_100015220 3300026118 Bacteria 7176
210 Ga0207675_100016157 3300026118 Bacteria 6971
211 Ga0207675_100087096 3300026118 Bacteria 2933
212 Ga0207675_100102835 3300026118 Bacteria 2692
213 Ga0207675_100244769 3300026118 Bacteria 1734
214 Ga0207683_10044607 3300026121 Bacteria 3876
215 Ga0207683_10060059 3300026121 Bacteria 3341
216 Ga0207428_10005535 3300027907 Bacteria 11769
217 Ga0207428_10009846 3300027907 Bacteria 8562
218 Ga0207428_10043256 3300027907 Bacteria 3639
219 Ga0207428_10168979 3300027907 Bacteria 1657
220 Ga0265354_1000026 3300028016 Bacteria 23406
221 Ga0268266_10046039 3300028379 Bacteria 3734
222 Ga0268266_10242487 3300028379 Bacteria 1664
223 Ga0265338_10026274 3300028800 Bacteria 5880
224 Ga0265770_1000057 3300030878 Bacteria 11970
225 Ga0265765_1000071 3300030879 Bacteria 5320
226 Ga0265760_10000876 3300031090 Bacteria 8694
227 Ga0265329_10019842 3300031242 Bacteria 2277
228 Ga0316576_10000755 3300031727 Bacteria 16130
229 Ga0316576_10052666 3300031727 Bacteria 2964
230 Ga0373962_0016971 3300035242 Bacteria 1883
231 Ga0316574_0001003 3300035398 Bacteria 12721
232 Ga0316574_0005046 3300035398 Bacteria 7010
233 Ga0316574_0049951 3300035398 Bacteria 2602
234 Ga0373931_0110500 3300035691 Bacteria 1559
235 Ga0373937_0068112 3300036401 Bacteria 3281
236 Ga0316582_0054403 3300036647 Bacteria 2548
237 Ga0373925_0000316 3300037068 Bacteria 50500
238 Ga0395900_0005449 3300037418 Bacteria 13333
239 Ga0451577_0117126 3300042876 Bacteria 2386
240 Ga0453683_0016107 3300044673 Bacteria 4831
241 Ga0453683_0036164 3300044673 Bacteria 3109
242 Ga0451576_0119498 3300045051 Bacteria 2743
243 Ga0495629_0000009 3300046459 Bacteria 348242
244 Ga0495639_0000469 3300046475 Bacteria 19228
245 Ga0495666_0000323 3300046526 Bacteria 20882
246 Ga0495586_0000540 3300046535 Bacteria 22093
247 Ga0495587_0030386 3300046536 Bacteria 3277
248 Ga0495634_0060167 3300046642 Bacteria 2528
249 Ga0495684_0004021 3300047471 Bacteria 11471
250 Ga0496108_0008490 3300048911 Bacteria 8334
251 Ga0496112_0022100 3300048915 Bacteria 6058
252 Ga0496112_0164272 3300048915 Bacteria 2186
253 Ga0496113_0008861 3300048916 Bacteria 6578
254 Ga0501033_0032630 3300049570 Bacteria 3911
255 Ga0501034_0014986 3300049571 Bacteria 7974
256 Ga0501034_0122565 3300049571 Bacteria 2585
257 Ga0501038_0157932 3300049574 Bacteria 1845
258 Ga0501043_0038354 3300049579 Bacteria 3767
259 Ga0501046_0010000 3300049580 Bacteria 8171
260 Ga0501047_0000670 3300049581 Bacteria 35678
261 Ga0501047_0007527 3300049581 Bacteria 10253
262 Ga0501047_0038461 3300049581 Bacteria 4629
263 Ga0501047_0062850 3300049581 Bacteria 3581
264 Ga0501048_0006907 3300049582 Bacteria 8626
265 Ga0501070_0020383 3300049586 Bacteria 5562
266 Ga0501075_0098238 3300049591 Unclassified 2223
267 Ga0501044_0000456 3300049823 Bacteria 49762
268 Ga0501044_0012425 3300049823 Bacteria 9221
269 Ga0501044_0032738 3300049823 Bacteria 5464
270 nmdc:mga05p37_132440_c1 3300050507 Bacteria 3059
271 nmdc:mga05p37_149425_c1 3300050507 Bacteria 2859
272 nmdc:mga05p37_163012_c1 3300050507 Bacteria 2722
273 nmdc:mga05p37_236294_c1 3300050507 Bacteria 2199
274 nmdc:mga05p37_277211_c1 3300050507 Bacteria 2001
275 nmdc:mga05p37_32634_c1 3300050507 Bacteria 6369
276 nmdc:mga05p37_4182_c1 3300050507 Bacteria 16865
277 nmdc:mga0qj67_125935_c1 3300050509 Bacteria 2073
278 nmdc:mga06r32_111450_c1 3300050510 Bacteria 2692
279 nmdc:mga06r32_13406_c1 3300050510 Bacteria 7423
280 nmdc:mga08y16_12078_c1 3300050511 Bacteria 9074
281 nmdc:mga08y16_17825_c1 3300050511 Bacteria 7479
282 nmdc:mga08y16_46245_c1 3300050511 Bacteria 4557
283 nmdc:mga08y16_8824_c1 3300050511 Bacteria 10581
284 nmdc:mga0n895_18389_c1 3300050512 Bacteria 6466
285 nmdc:mga0n895_33_c1 3300050512 Bacteria 80749
286 nmdc:mga0n895_6468_c1 3300050512 Bacteria 9953
287 nmdc:mga0rr50_12534_c1 3300050513 Bacteria 5486
288 nmdc:mga0rr50_1_c1 3300050513 Bacteria 558123
289 nmdc:mga0rr50_4885_c1 3300050513 Bacteria 7929
290 nmdc:mga08x19_19006_c1 3300050514 Bacteria 4214
291 nmdc:mga08x19_31038_c1 3300050514 Bacteria 3359
292 nmdc:mga08x19_681_c1 3300050514 Bacteria 21779
293 nmdc:mga0a205_15961_c1 3300050515 Bacteria 7026
294 nmdc:mga0a205_21177_c1 3300050515 Bacteria 6149
295 nmdc:mga0a205_44652_c1 3300050515 Bacteria 4273
296 nmdc:mga0a205_65148_c1 3300050515 Bacteria 3520
297 nmdc:mga0a205_79011_c1 3300050515 Bacteria 3179
298 nmdc:mga0a205_80321_c1 3300050515 Bacteria 3152
299 Ga0495619_0076981 3300053085 Bacteria 2240
300 Ga0501082_0194191 3300060353 Bacteria 1766
301 Ga0111539_10085795
302 rootH2_10000244
303 Ga0065712_10077694
304 Ga0065707_10087357
305 Ga0065707_10087732
306 Ga0070658_10022045
307 Ga0070658_10082707
308 Ga0070676_10004181
309 Ga0070683_100030901
310 Ga0070677_10000471
311 Ga0070677_10001165
312 Ga0070680_100017573
313 Ga0068868_100073385
314 Ga0070689_100090375
315 Ga0070691_10014760
316 Ga0070687_100029878
317 Ga0070661_100014623
318 Ga0070692_10012759
319 Ga0070669_100019355
320 Ga0070669_100044367
321 Ga0070669_100142425
322 Ga0070675_100005901
323 Ga0070675_100107539
324 Ga0070671_100035053
325 Ga0070673_100092604
326 Ga0070688_100037071
327 Ga0070667_100006740
328 Ga0070667_100041929
329 Ga0070667_100132884
330 Ga0070703_10006938
331 Ga0070709_10003273
332 Ga0070700_100013091
333 Ga0070694_100000216
334 Ga0070694_100003113
335 Ga0070694_100040140
336 Ga0070694_100093510
337 Ga0070708_100020244
338 Ga0070708_100044193
339 Ga0070708_100050238
340 Ga0070678_100049043
341 Ga0070678_100168008
342 Ga0070662_100096689
343 Ga0068867_100072464
344 Ga0070685_10032938
345 Ga0070698_100002272
346 Ga0070699_100000291
347 Ga0070699_100001937
348 Ga0070699_100015031
349 Ga0070679_100015096
350 Ga0070679_100015803
351 Ga0070684_100020547
352 Ga0070684_100076924
353 Ga0070697_100053142
354 Ga0070672_100028335
355 Ga0070686_100027380
356 Ga0070686_100041815
357 Ga0070695_100031119
358 Ga0070696_100033151
359 Ga0070696_100178988
360 Ga0070665_100006452
361 Ga0070704_100115557
362 Ga0068855_100003705
363 Ga0068855_100128500
364 Ga0070664_100003261
365 Ga0068857_100241579
366 Ga0068854_100046081
367 Ga0068859_100065772
368 Ga0068864_100013191
369 Ga0068864_100016349
370 Ga0068864_100111180
371 Ga0068864_100235069
372 Ga0068866_10023455
373 Ga0068861_100039328
374 Ga0068861_100059738
375 Ga0068861_100069777
376 Ga0068870_10011090
377 Ga0068870_10016694
378 Ga0068863_100018445
379 Ga0068863_100021248
380 Ga0068863_100144770
381 Ga0068858_100049135
382 Ga0068858_100049425
383 Ga0068858_100103931
384 Ga0068860_100024317
385 Ga0068860_100107705
386 Ga0068862_100022447
387 Ga0097621_100097571
388 Ga0068871_100009939
389 Ga0075430_100011644
390 Ga0075430_100134400
391 Ga0075431_100039287
392 Ga0075431_100096317
393 Ga0075431_100178606
394 Ga0075433_10005856
395 Ga0075433_10013462
396 Ga0075433_10020105
397 Ga0075433_10020858
398 Ga0075433_10038877
399 Ga0075433_10077063
400 Ga0075433_10103933
401 Ga0075434_100000161
402 Ga0075434_100018077
403 Ga0075434_100254660
404 Ga0075429_100008717
405 Ga0068865_100090041
406 Ga0075436_100002054
407 Ga0075436_100052119
408 Ga0097620_100065769
409 Ga0075435_100001806
410 Ga0075435_100003057
411 Ga0105240_10005334
412 Ga0105240_10113320
413 Ga0111539_10003404
414 Ga0111539_10013336
415 Ga0111539_10064356
416 Ga0111539_10317842
417 Ga0105245_10072680
418 Ga0105247_10005349
419 Ga0114129_10005814
420 Ga0114129_10005939
421 Ga0114129_10006128
422 Ga0114129_10059281
423 Ga0114129_10151013
424 Ga0114129_10154021
425 Ga0114129_10207874
426 Ga0114129_10387947
427 Ga0114129_10506858
428 Ga0105243_10029269
429 Ga0105242_10015846
430 Ga0105242_10086309
431 Ga0105248_10086949
432 Ga0105248_10093401
433 Ga0105248_10120822
434 Ga0105248_10135987
435 Ga0105246_10039692
436 Ga0157370_10048544
437 Ga0157369_10048135
438 Ga0163162_10022148
439 Ga0157372_10168933
440 Ga0157372_10326444
441 Ga0157375_10233769
442 Ga0163163_10030442
443 Ga0163163_10052622
444 Ga0163163_10159378
445 Ga0157380_10179054
446 Ga0157377_10029277
447 Ga0157379_10031981
448 Ga0157379_10081101
449 Ga0157376_10104679
450 Ga0207697_10010083
451 Ga0207682_10007599
452 Ga0207642_10029007
453 Ga0207710_10009927
454 Ga0207688_10010257
455 Ga0207645_10007546
456 Ga0207645_10026042
457 Ga0207645_10046235
458 Ga0207643_10007357
459 Ga0207707_10004711
460 Ga0207695_10031864
461 Ga0207695_10220718
462 Ga0207660_10012328
463 Ga0207662_10021074
464 Ga0207657_10004214
465 Ga0207649_10014371
466 Ga0207652_10053162
467 Ga0207646_10007241
468 Ga0207681_10121024
469 Ga0207650_10027224
470 Ga0207659_10000129
471 Ga0207687_10044673
472 Ga0207700_10042059
473 Ga0207706_10107451
474 Ga0207706_10133962
475 Ga0207686_10014340
476 Ga0207709_10031694
477 Ga0207709_10058827
478 Ga0207670_10079143
479 Ga0207704_10068483
480 Ga0207665_10002821
481 Ga0207691_10076644
482 Ga0207691_10080951
483 Ga0207691_10185908
484 Ga0207711_10001252
485 Ga0207711_10092739
486 Ga0207711_10148319
487 Ga0207711_10165053
488 Ga0207689_10011882
489 Ga0207661_10009789
490 Ga0207679_10003305
491 Ga0207667_10027837
492 Ga0207667_10238010
493 Ga0207651_10047062
494 Ga0207668_10105583
495 Ga0207658_10113088
496 Ga0207677_10015939
497 Ga0207677_10034732
498 Ga0207677_10125297
499 Ga0207708_10001465
500 Ga0207708_10021378
501 Ga0207641_10007134
502 Ga0207648_10018122
503 Ga0207648_10019353
504 Ga0207676_10008840
505 Ga0207676_10019645
506 Ga0207676_10080565
507 Ga0207676_10257459
508 Ga0207674_10059709
509 Ga0207675_100015220
510 Ga0207675_100016157
511 Ga0207675_100087096
512 Ga0207675_100102835
513 Ga0207675_100244769
514 Ga0207683_10044607
515 Ga0207683_10060059
516 Ga0207428_10005535
517 Ga0207428_10009846
518 Ga0207428_10043256
519 Ga0207428_10168979
520 Ga0265354_1000026
521 Ga0268266_10046039
522 Ga0268266_10242487
523 Ga0265338_10026274
524 Ga0265770_1000057
525 Ga0265765_1000071
526 Ga0265760_10000876
527 Ga0265329_10019842
528 Ga0316576_10000755
529 Ga0316576_10052666
530 Ga0373962_0016971
531 Ga0316574_0001003
532 Ga0316574_0005046
533 Ga0316574_0049951
534 Ga0373931_0110500
535 Ga0373937_0068112
536 Ga0316582_0054403
537 Ga0373925_0000316
538 Ga0395900_0005449
539 Ga0451577_0117126
540 Ga0453683_0016107
541 Ga0453683_0036164
542 Ga0451576_0119498
543 Ga0495629_0000009
544 Ga0495639_0000469
545 Ga0495666_0000323
546 Ga0495586_0000540
547 Ga0495587_0030386
548 Ga0495634_0060167
549 Ga0495684_0004021
550 Ga0496108_0008490
551 Ga0496112_0022100
552 Ga0496112_0164272
553 Ga0496113_0008861
554 Ga0501033_0032630
555 Ga0501034_0014986
556 Ga0501034_0122565
557 Ga0501038_0157932
558 Ga0501043_0038354
559 Ga0501046_0010000
560 Ga0501047_0000670
561 Ga0501047_0007527
562 Ga0501047_0038461
563 Ga0501047_0062850
564 Ga0501048_0006907
565 Ga0501070_0020383
566 Ga0501075_0098238
567 Ga0501044_0000456
568 Ga0501044_0012425
569 Ga0501044_0032738
570 nmdc:mga05p37_132440_c1
571 nmdc:mga05p37_149425_c1
572 nmdc:mga05p37_163012_c1
573 nmdc:mga05p37_236294_c1
574 nmdc:mga05p37_277211_c1
575 nmdc:mga05p37_32634_c1
576 nmdc:mga05p37_4182_c1
577 nmdc:mga0qj67_125935_c1
578 nmdc:mga06r32_111450_c1
579 nmdc:mga06r32_13406_c1
580 nmdc:mga08y16_12078_c1
581 nmdc:mga08y16_17825_c1
582 nmdc:mga08y16_46245_c1
583 nmdc:mga08y16_8824_c1
584 nmdc:mga0n895_18389_c1
585 nmdc:mga0n895_33_c1
586 nmdc:mga0n895_6468_c1
587 nmdc:mga0rr50_12534_c1
588 nmdc:mga0rr50_1_c1
589 nmdc:mga0rr50_4885_c1
590 nmdc:mga08x19_19006_c1
591 nmdc:mga08x19_31038_c1
592 nmdc:mga08x19_681_c1
593 nmdc:mga0a205_15961_c1
594 nmdc:mga0a205_21177_c1
595 nmdc:mga0a205_44652_c1
596 nmdc:mga0a205_65148_c1
597 nmdc:mga0a205_79011_c1
598 nmdc:mga0a205_80321_c1
599 Ga0495619_0076981
600 Ga0501082_0194191

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00749

tRNA-synt_1c

tRNA synthetases class I (E and Q), catalytic domain

55

370

0.99

PF19269

Anticodon_2

Anticodon binding domain

383

532

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
6brl-assembly1.cif.gz_A crystal structure of a glutamate trna ligase from elizabethkingia meningosepticum ccug26117 in complex with its amino acid 0.8865 2 447
6brl-assembly1.cif.gz_A crystal structure of a glutamate trna ligase from elizabethkingia meningosepticum ccug26117 in complex with its amino acid 0.8827 2 447
6b1z-assembly1.cif.gz_A crystal structure of glutamate-trna synthetase from elizabethkingia anophelis 0.8729 2 445
2o5r-assembly1.cif.gz_A crystal structure of glutamyl-trna synthetase 1 (ec 6.1.1.17) (glutamate-trna ligase 1) (glurs 1) (tm1351) from thermotoga maritima at 2.5 a resolution 0.8695 4 443
6b1z-assembly1.cif.gz_A crystal structure of glutamate-trna synthetase from elizabethkingia anophelis 0.8654 2 445
ID Description Score Start End Superfamily
3akzC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9717 4 237 3.40.50.620
3akzC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9561 4 237 3.40.50.620
af_Q9FEA2_46_378_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9523 3 320 3.40.50.620
af_Q869Z3_49_403_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9516 2 322 3.40.50.620
4griB03 Mainly Alpha;Orthogonal Bundle;Glutamyl-tRNA Synthetase; domain 2;Glutamyl-trna Synthetase; Domain 2 0.9389 240 322 1.10.1160.10
ID Description Score Start End GO Terms
AF-A0A7Y1TMI1-F1-model_v4 Glutamate--tRNA ligase 0.9992 1 82 GO:0004818
GO:0005524
GO:0005829
GO:0006424
AF-A0A7Z9IMH9-F1-model_v4 Glutamate--tRNA ligase 0.9955 1 84 GO:0004818
GO:0005524
GO:0006424
AF-A0A7R9QNF5-F1-model_v4 Glutamyl/glutaminyl-tRNA synthetase class Ib catalytic domain-containing protein 0.9937 2 84 GO:0004818
GO:0005524
GO:0005739
GO:0006424
AF-A0A356B4W8-F1-model_v4 Glutamate--tRNA ligase 0.9909 1 87 GO:0004818
GO:0005524
GO:0006424
AF-W4QVD6-F1-model_v4 Glutamyl-tRNA synthetase 0.9903 2 93 GO:0004818
GO:0005524
GO:0006424

Map