F395021

General Info

Members Datasets Scaffolds Average Seq Length
299 222 598 754

Family's Representative Sequence

Representative Sequence 3300048907|Ga0496104_0003894|Ga0496104_0003894_6453_8915
Length 804
Sequence MPAGQAADRRPRPPPACAGRARLDVLALTSKVVMRVTSTLPAQTGTGSLDGLRAIERRVLWLSTAIIDHANRVRPNPTGLKVGGHQASSASMVSIMTELWFRQLRAGDRVSVKPHASPVLHAINYLLGALDERYLTTLRAFGGLQSYPSRSKDPDPVDYSTGSVGIGATAPVWGALARRYILSHADTPPADGTPGRQYSLIGDAELDEGACWEAILDPAVAELGEVVWIVDFNRQSLDRVVPNIGAPRLQGMFAAAGWQVLTVKYGRLLNGIFQRPGGGALRDRIDDMPNPEYQRLLRCRPADLRDRLPGQGPQAGPLGELLAGVEDAELHAAFRGLGGHDLAALGDAFAAIDDSRPTVIFAYTVKGYGLPGEGHPQNHSALLTGDQLRDLAARLGADPDQPWARFASGSPEAELCPAAIPEDFGRTPHGKSTTQAALGRALLDLTRQAPEAARRVVTVSPDVSSSTNLGGWVNKVGVWSPTERVDWFADDGETILHWRERPTGQHIELGIAETNLVGLLGELGATWSRWGEPLLPIGVLYDPFVGRALEPWSFGIYAGGQSILVGTPSGVSLAPEGGAHQSVITPSIGIEQPGCVSYEPAFALDAEWCLLASLAQLGKAGGSSAYLRLSTRPVDQSLAAVPADPDARELRRRRAVAGGYPIRLHAGPRLTIAAMGAVLPEALAAADRLDAAGVGCDVICVTSADLLFRATAARNGLQDGPTWILEQLFPASRARPLLTVLDGHPHTLAFLAGVRNVPSVTLGVHQFGQSGDPSEVYRYHGIDTASIVRAGLGLADREPRGGGP

Samples

Sample ID Description Type Environment
1 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
25 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
39 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
42 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
43 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
44 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
45 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
46 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
47 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
48 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
49 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
50 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
51 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
52 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
53 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
54 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
55 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
56 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
58 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
59 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
61 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
62 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
63 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
64 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
65 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
66 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
67 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
68 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
69 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
70 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
71 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
106 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
108 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
109 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
110 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
111 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
112 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
113 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
114 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
115 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
116 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
117 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
118 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
119 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
120 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
121 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
122 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
123 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
124 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
125 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
126 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
127 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
128 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
129 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
130 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
131 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
132 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
133 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
134 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
135 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
136 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
137 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
138 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
139 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
140 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
141 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
142 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
143 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
144 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
145 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
146 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
147 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
148 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
149 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
150 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
151 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
152 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
153 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
154 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
155 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
156 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
157 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
158 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
159 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
160 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
161 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
162 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
163 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
164 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
165 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
166 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
167 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
168 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
169 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
170 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
171 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
172 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
173 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
174 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
175 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
176 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
177 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
178 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
179 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
180 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
181 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
182 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
183 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
184 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
185 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
186 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
187 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
188 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
189 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
190 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
191 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
192 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
193 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
194 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
195 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
196 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
197 2622736605 Geodermatophilus ruber DSM 45317 Isolate Rhizosphere
198 2643221649 Leifsonia sp. Root4 Isolate Unclassified
199 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
200 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
201 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
202 2808606372 Agromyces sp. 23-23 Isolate Unclassified
203 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
204 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
205 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
206 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
207 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
208 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
209 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
210 8002775197 Frankia nepalensis CN7 Isolate Nodule
211 8002784119 Frankia sp. AgB1.9 Isolate Nodule
212 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
213 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
214 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
215 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
216 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
217 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
218 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
219 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere
220 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
221 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified
222 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.97
Metatranscriptomes 0
Isolates 9.03

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.67
Nodule 0.67
Rhizoplane 9.36
Rhizosphere 81.27
Stem 0
Stem Tuber 0.33
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496104_0003894 3300048907 Bacteria 12922
2 JGI25407J50210_10009717 3300003373 Bacteria 2441
3 Ga0070670_100018141 3300005331 Bacteria 6038
4 Ga0068869_100001805 3300005334 Bacteria 12849
5 Ga0068869_100018519 3300005334 Bacteria 4742
6 Ga0070680_100006889 3300005336 Bacteria 8668
7 Ga0070660_100034963 3300005339 Bacteria 3800
8 Ga0070660_100037358 3300005339 Bacteria 3682
9 Ga0070689_100037639 3300005340 Bacteria 3699
10 Ga0070691_10003431 3300005341 Bacteria 7121
11 Ga0070675_100010317 3300005354 Bacteria 7292
12 Ga0070675_100056642 3300005354 Bacteria 3230
13 Ga0070671_100064678 3300005355 Bacteria 3046
14 Ga0070673_100032476 3300005364 Bacteria 3931
15 Ga0070659_100040710 3300005366 Bacteria 3631
16 Ga0070703_10008287 3300005406 Bacteria 2922
17 Ga0070709_10000135 3300005434 Bacteria 49189
18 Ga0070714_100001428 3300005435 Bacteria 17361
19 Ga0070714_100004365 3300005435 Bacteria 10651
20 Ga0070678_100033306 3300005456 Bacteria 3576
21 Ga0070662_100008660 3300005457 Bacteria 6638
22 Ga0070681_10068852 3300005458 Bacteria 3505
23 Ga0070706_100004151 3300005467 Bacteria 14089
24 Ga0070706_100017412 3300005467 Bacteria 6631
25 Ga0070707_100056861 3300005468 Bacteria 3753
26 Ga0070698_100000977 3300005471 Bacteria 31421
27 Ga0070699_100001967 3300005518 Bacteria 18553
28 Ga0070679_100025524 3300005530 Bacteria 5800
29 Ga0070686_100022670 3300005544 Bacteria 3744
30 Ga0070693_100006017 3300005547 Bacteria 5868
31 Ga0070665_100002386 3300005548 Bacteria 20715
32 Ga0070665_100009252 3300005548 Bacteria 9977
33 Ga0070704_100025042 3300005549 Bacteria 3924
34 Ga0068855_100069053 3300005563 Bacteria 4112
35 Ga0070664_100046231 3300005564 Bacteria 3677
36 Ga0068857_100048065 3300005577 Bacteria 3788
37 Ga0068856_100011240 3300005614 Bacteria 8690
38 Ga0070702_100000332 3300005615 Bacteria 16436
39 Ga0068852_100038762 3300005616 Bacteria 4007
40 Ga0068859_100072789 3300005617 Bacteria 3473
41 Ga0068864_100008133 3300005618 Bacteria 8649
42 Ga0068866_10014083 3300005718 Bacteria 3523
43 Ga0068861_100012642 3300005719 Bacteria 5891
44 Ga0068851_10004686 3300005834 Bacteria 6181
45 Ga0068870_10000281 3300005840 Bacteria 18853
46 Ga0068863_100006423 3300005841 Bacteria 11527
47 Ga0068860_100064964 3300005843 Bacteria 3465
48 Ga0081455_10000638 3300005937 Bacteria 45411
49 Ga0081538_10000263 3300005981 Bacteria 59895
50 Ga0081538_10000299 3300005981 Bacteria 57017
51 Ga0081538_10000824 3300005981 Bacteria 33659
52 Ga0081538_10000941 3300005981 Bacteria 31380
53 Ga0081538_10001766 3300005981 Bacteria 21872
54 Ga0081538_10003898 3300005981 Bacteria 13931
55 Ga0081538_10004790 3300005981 Bacteria 12361
56 Ga0081538_10005425 3300005981 Bacteria 11452
57 Ga0081538_10019474 3300005981 Bacteria 5041
58 Ga0081538_10021525 3300005981 Bacteria 4702
59 Ga0081538_10027055 3300005981 Bacteria 3987
60 Ga0081540_1000089 3300005983 Bacteria 97819
61 Ga0081540_1002305 3300005983 Bacteria 15660
62 Ga0081539_10005710 3300005985 Bacteria 12454
63 Ga0081539_10020061 3300005985 Bacteria 4543
64 Ga0070717_10015951 3300006028 Bacteria 5815
65 Ga0070716_100000099 3300006173 Bacteria 34121
66 Ga0070712_100046026 3300006175 Bacteria 3015
67 Ga0075430_100000288 3300006846 Bacteria 35424
68 Ga0075430_100009816 3300006846 Bacteria 8097
69 Ga0075431_100013092 3300006847 Bacteria 8379
70 Ga0075431_100061290 3300006847 Bacteria 3882
71 Ga0075433_10048279 3300006852 Bacteria 3702
72 Ga0075434_100014955 3300006871 Bacteria 7426
73 Ga0075429_100052944 3300006880 Bacteria 3531
74 Ga0068865_100028364 3300006881 Bacteria 3705
75 Ga0075436_100030088 3300006914 Bacteria 3736
76 Ga0097620_100072787 3300006931 Bacteria 3473
77 Ga0075435_100042288 3300007076 Bacteria 3645
78 Ga0105240_10074143 3300009093 Bacteria 4201
79 Ga0111539_10011167 3300009094 Bacteria 11296
80 Ga0105245_10059238 3300009098 Bacteria 3448
81 Ga0105241_10055822 3300009174 Bacteria 3026
82 Ga0105242_10044587 3300009176 Bacteria 3592
83 Ga0105237_10001007 3300009545 Bacteria 37936
84 Ga0105249_10049099 3300009553 Bacteria 3848
85 Ga0105239_10065406 3300010375 Bacteria 3993
86 Ga0105239_10107667 3300010375 Bacteria 3088
87 Ga0105246_10005446 3300011119 Bacteria 7752
88 Ga0157372_10024174 3300013307 Bacteria 6594
89 Ga0163163_10017694 3300014325 Bacteria 6654
90 Ga0157377_10028279 3300014745 Bacteria 3016
91 Ga0213875_10000148 3300021388 Bacteria 74125
92 Ga0213875_10002779 3300021388 Bacteria 10332
93 Ga0207692_10000342 3300025898 Bacteria 16158
94 Ga0207699_10000148 3300025906 Bacteria 45232
95 Ga0207643_10000120 3300025908 Bacteria 53357
96 Ga0207705_10009437 3300025909 Bacteria 7095
97 Ga0207671_10000782 3300025914 Bacteria 40342
98 Ga0207693_10006036 3300025915 Bacteria 10035
99 Ga0207693_10049626 3300025915 Bacteria 3296
100 Ga0207663_10001571 3300025916 Bacteria 10721
101 Ga0207657_10009239 3300025919 Bacteria 9936
102 Ga0207652_10032312 3300025921 Bacteria 4398
103 Ga0207646_10034075 3300025922 Bacteria 4602
104 Ga0207650_10020798 3300025925 Bacteria 4633
105 Ga0207659_10024776 3300025926 Bacteria 4025
106 Ga0207687_10021008 3300025927 Bacteria 4335
107 Ga0207700_10000793 3300025928 Bacteria 18260
108 Ga0207664_10000246 3300025929 Bacteria 40614
109 Ga0207644_10043187 3300025931 Bacteria 3198
110 Ga0207706_10012848 3300025933 Bacteria 7621
111 Ga0207706_10060362 3300025933 Bacteria 3339
112 Ga0207704_10028444 3300025938 Bacteria 3101
113 Ga0207665_10023700 3300025939 Bacteria 4042
114 Ga0207691_10021802 3300025940 Bacteria 6047
115 Ga0207689_10000836 3300025942 Bacteria 29717
116 Ga0207689_10019536 3300025942 Bacteria 5709
117 Ga0207661_10018771 3300025944 Bacteria 5143
118 Ga0207651_10075770 3300025960 Bacteria 2402
119 Ga0207640_10031984 3300025981 Bacteria 3258
120 Ga0207677_10038698 3300026023 Bacteria 3129
121 Ga0207703_10043153 3300026035 Bacteria 3618
122 Ga0207678_10012498 3300026067 Bacteria 7456
123 Ga0207702_10000890 3300026078 Bacteria 30992
124 Ga0207641_10034692 3300026088 Bacteria 4198
125 Ga0207641_10042299 3300026088 Bacteria 3822
126 Ga0207676_10006860 3300026095 Bacteria 8065
127 Ga0207674_10015650 3300026116 Bacteria 8329
128 Ga0207674_10027469 3300026116 Bacteria 6019
129 Ga0207675_100000340 3300026118 Bacteria 44823
130 Ga0207675_100003528 3300026118 Bacteria 15258
131 Ga0207675_100023334 3300026118 Bacteria 5754
132 Ga0207675_100027743 3300026118 Bacteria 5274
133 Ga0207683_10001290 3300026121 Bacteria 22692
134 Ga0207683_10033055 3300026121 Bacteria 4493
135 Ga0207698_10007101 3300026142 Bacteria 7015
136 Ga0207428_10033879 3300027907 Bacteria 4189
137 Ga0268264_10032096 3300028381 Bacteria 4309
138 Ga0265338_10001371 3300028800 Bacteria 39597
139 Ga0307512_10012009 3300030522 Bacteria 8190
140 Ga0307513_10021011 3300031456 Bacteria 7719
141 Ga0307508_10021614 3300031616 Bacteria 5851
142 Ga0307516_10003889 3300031730 Bacteria 18848
143 Ga0307516_10029901 3300031730 Bacteria 5503
144 Ga0307409_100018500 3300031995 Bacteria 4687
145 Ga0307409_100045562 3300031995 Bacteria 3312
146 Ga0307409_100063664 3300031995 Bacteria 2893
147 Ga0307416_100042313 3300032002 Bacteria 3555
148 Ga0307415_100002054 3300032126 Bacteria 9948
149 Ga0307507_10000013 3300033179 Bacteria 242708
150 Ga0373934_0000078 3300035086 Bacteria 34263
151 Ga0373953_0000181 3300035117 Bacteria 16763
152 Ga0373954_0000607 3300035118 Bacteria 13635
153 Ga0373956_0000098 3300035119 Bacteria 29655
154 Ga0373957_0000011 3300035120 Bacteria 47051
155 Ga0373955_0000060 3300035172 Bacteria 42697
156 Ga0373962_0006146 3300035242 Bacteria 2903
157 Ga0373924_0000070 3300035410 Bacteria 27222
158 Ga0373933_0000009 3300035724 Bacteria 112662
159 Ga0373947_0004813 3300035725 Bacteria 7903
160 Ga0373937_0000110 3300036401 Bacteria 77832
161 Ga0373925_0000373 3300037068 Bacteria 46652
162 Ga0373925_0048064 3300037068 Bacteria 3178
163 Ga0395898_0018427 3300037466 Bacteria 7119
164 Ga0436364_0515656 3300037853 Bacteria 17877
165 Ga0436364_1105580 3300037853 Bacteria 94835
166 Ga0466972_0000780 3300044658 Bacteria 15088
167 Ga0466972_0001775 3300044658 Bacteria 10568
168 Ga0466965_0001827 3300044683 Bacteria 8849
169 Ga0466963_0054289 3300044694 Bacteria 2662
170 Ga0466971_0008650 3300044719 Bacteria 4443
171 Ga0466957_0018570 3300044842 Bacteria 4085
172 Ga0466967_0012999 3300045976 Bacteria 6404
173 Ga0466967_0013132 3300045976 Bacteria 6382
174 Ga0466967_0047365 3300045976 Bacteria 3747
175 Ga0466967_0087025 3300045976 Bacteria 2832
176 Ga0495592_0000049 3300046454 Bacteria 113704
177 Ga0495603_0001884 3300046455 Bacteria 12373
178 Ga0495603_0035992 3300046455 Bacteria 2972
179 Ga0495651_0000007 3300046462 Bacteria 158577
180 Ga0495651_0008149 3300046462 Bacteria 8034
181 Ga0495653_0000996 3300046463 Bacteria 21820
182 Ga0495653_0008277 3300046463 Bacteria 8527
183 Ga0495608_0000076 3300046511 Bacteria 74854
184 Ga0495608_0000665 3300046511 Bacteria 23751
185 Ga0495628_0020933 3300046516 Bacteria 5387
186 Ga0495630_0026742 3300046517 Bacteria 4274
187 Ga0495643_0002384 3300046522 Bacteria 15009
188 Ga0495652_0000168 3300046529 Bacteria 74913
189 Ga0495652_0009135 3300046529 Bacteria 9013
190 Ga0495652_0065146 3300046529 Bacteria 3062
191 Ga0495665_0010338 3300046531 Bacteria 5050
192 Ga0495640_0008704 3300046533 Bacteria 7955
193 Ga0495587_0000032 3300046536 Bacteria 124143
194 Ga0495587_0005894 3300046536 Bacteria 7985
195 Ga0495667_0000072 3300046559 Bacteria 75080
196 Ga0495667_0001873 3300046559 Bacteria 13950
197 Ga0495667_0029483 3300046559 Bacteria 3693
198 Ga0495667_0037553 3300046559 Bacteria 3227
199 Ga0495634_0005492 3300046642 Bacteria 9746
200 Ga0495635_0004429 3300046663 Bacteria 9730
201 Ga0495657_0000424 3300046675 Bacteria 39370
202 Ga0495657_0004002 3300046675 Bacteria 11827
203 Ga0495599_0000062 3300046678 Bacteria 74940
204 Ga0495599_0004623 3300046678 Bacteria 8157
205 Ga0495646_0039327 3300046680 Bacteria 2916
206 Ga0495669_0005647 3300046684 Bacteria 5222
207 Ga0495613_0007313 3300046689 Bacteria 8222
208 Ga0495624_0046817 3300046690 Bacteria 2749
209 Ga0495600_0000743 3300046809 Bacteria 17166
210 Ga0495600_0002754 3300046809 Bacteria 10186
211 Ga0495604_0000062 3300047317 Bacteria 93264
212 Ga0495676_0002823 3300047321 Bacteria 15654
213 Ga0495680_0000101 3300047322 Bacteria 78550
214 Ga0495687_002268 3300047443 Bacteria 15770
215 Ga0495687_003726 3300047443 Bacteria 10815
216 Ga0495675_0000116 3300047444 Bacteria 57631
217 Ga0495675_0004975 3300047444 Bacteria 8090
218 Ga0495675_0012751 3300047444 Bacteria 5294
219 Ga0495684_0005735 3300047471 Bacteria 9658
220 Ga0495593_0037081 3300047673 Bacteria 2640
221 Ga0495602_0000115 3300048088 Bacteria 75982
222 Ga0495602_0015475 3300048088 Bacteria 7696
223 Ga0496100_0001923 3300048903 Bacteria 10385
224 Ga0496102_0013094 3300048905 Bacteria 7176
225 Ga0496102_0017935 3300048905 Bacteria 6210
226 Ga0496103_0017239 3300048906 Bacteria 4320
227 Ga0496104_0013375 3300048907 Bacteria 7394
228 Ga0496104_0016425 3300048907 Bacteria 6724
229 Ga0496105_0010494 3300048908 Bacteria 7285
230 Ga0496105_0039061 3300048908 Bacteria 3911
231 Ga0496106_0008486 3300048909 Bacteria 7601
232 Ga0496106_0036296 3300048909 Bacteria 3687
233 Ga0496106_0059422 3300048909 Bacteria 2896
234 Ga0496108_0004450 3300048911 Bacteria 11283
235 Ga0496108_0006715 3300048911 Bacteria 9317
236 Ga0496109_0019173 3300048912 Bacteria 6024
237 Ga0496109_0033519 3300048912 Bacteria 4621
238 Ga0496109_0039625 3300048912 Bacteria 4265
239 Ga0496110_0000775 3300048913 Bacteria 22212
240 Ga0496110_0032716 3300048913 Bacteria 4495
241 Ga0496111_0007561 3300048914 Bacteria 7129
242 Ga0496112_0075902 3300048915 Bacteria 3324
243 Ga0496112_0091581 3300048915 Bacteria 3009
244 Ga0496112_0137548 3300048915 Bacteria 2412
245 Ga0496113_0055730 3300048916 Bacteria 2965
246 Ga0496114_0002709 3300048917 Bacteria 13535
247 Ga0496114_0056196 3300048917 Bacteria 3284
248 Ga0496114_0061028 3300048917 Bacteria 3153
249 Ga0501036_0017849 3300049572 Bacteria 5940
250 Ga0501039_0001113 3300049575 Bacteria 19774
251 Ga0501039_0037726 3300049575 Bacteria 3731
252 Ga0501040_0016379 3300049576 Bacteria 4907
253 Ga0501040_0037531 3300049576 Bacteria 3292
254 Ga0501040_0060696 3300049576 Bacteria 2599
255 Ga0501041_0032293 3300049577 Bacteria 3164
256 Ga0501046_0000203 3300049580 Bacteria 61563
257 Ga0501047_0011613 3300049581 Bacteria 8332
258 Ga0501047_0109280 3300049581 Bacteria 2648
259 Ga0501048_0056443 3300049582 Bacteria 2786
260 Ga0501071_0023116 3300049587 Bacteria 4339
261 Ga0501071_0098731 3300049587 Bacteria 2151
262 Ga0501072_0004723 3300049588 Bacteria 10378
263 Ga0501076_0148911 3300049592 Bacteria 1903
264 Ga0501077_0051451 3300049593 Bacteria 2618
265 nmdc:mga05p37_17002_c1 3300050507 Bacteria 8772
266 nmdc:mga08y16_47577_c1 3300050511 Bacteria 4490
267 nmdc:mga0n895_60517_c1 3300050512 Bacteria 3737
268 nmdc:mga0rr50_26302_c1 3300050513 Bacteria 4058
269 Ga0495601_0002093 3300053077 Bacteria 11215
270 Ga0495595_0000198 3300053084 Bacteria 24262
271 Ga0500583_0005024 3300053092 Bacteria 4386
272 Ga0500568_0001192 3300053139 Bacteria 17371
273 2623500888 2622736605 Bacteria 4992138
274 2644278787 2643221649 Bacteria 3867359
275 2785372990 2784746768 Bacteria 10036182
276 2793975416 2791355406 Bacteria 11364898
277 2804848552 2802429296 Bacteria 7227771
278 2808903125 2808606372 Bacteria 4649509
279 2819745088 2818991472 Bacteria 10089953
280 2899372340 2899370129 Bacteria 6781179
281 2917739298 2917736166 Bacteria 9690793
282 2990064219 2990059506 Bacteria 9321252
283 2990089385 2990088156 Bacteria 6657676
284 2997607421 2997600082 Bacteria 9896405
285 3006327337 3006321560 Bacteria 8247479
286 8002782062 8002775197 Bacteria 10728764
287 8002789464 8002784119 Bacteria 9788632
288 8008488476 8008485437 Bacteria 7198341
289 8025418139 8025413630 Bacteria 7014048
290 8025527477 8025524527 Bacteria 7197316
291 8047902707 8047893842 Bacteria 11723082
292 8048128193 8048127548 Bacteria 11053136
293 8048134440 8048127548 Bacteria 11053136
294 8048370505 8048369669 Bacteria 11666822
295 8048388917 8048379754 Bacteria 11877923
296 8054472796 8054472261 Bacteria 7464355
297 8055069387 8055066027 Bacteria 9479577
298 8055179057 8055172936 Bacteria 9305943
299 8056210050 8056207758 Bacteria 8639239
300 Ga0496104_0003894
301 JGI25407J50210_10009717
302 Ga0070670_100018141
303 Ga0068869_100001805
304 Ga0068869_100018519
305 Ga0070680_100006889
306 Ga0070660_100034963
307 Ga0070660_100037358
308 Ga0070689_100037639
309 Ga0070691_10003431
310 Ga0070675_100010317
311 Ga0070675_100056642
312 Ga0070671_100064678
313 Ga0070673_100032476
314 Ga0070659_100040710
315 Ga0070703_10008287
316 Ga0070709_10000135
317 Ga0070714_100001428
318 Ga0070714_100004365
319 Ga0070678_100033306
320 Ga0070662_100008660
321 Ga0070681_10068852
322 Ga0070706_100004151
323 Ga0070706_100017412
324 Ga0070707_100056861
325 Ga0070698_100000977
326 Ga0070699_100001967
327 Ga0070679_100025524
328 Ga0070686_100022670
329 Ga0070693_100006017
330 Ga0070665_100002386
331 Ga0070665_100009252
332 Ga0070704_100025042
333 Ga0068855_100069053
334 Ga0070664_100046231
335 Ga0068857_100048065
336 Ga0068856_100011240
337 Ga0070702_100000332
338 Ga0068852_100038762
339 Ga0068859_100072789
340 Ga0068864_100008133
341 Ga0068866_10014083
342 Ga0068861_100012642
343 Ga0068851_10004686
344 Ga0068870_10000281
345 Ga0068863_100006423
346 Ga0068860_100064964
347 Ga0081455_10000638
348 Ga0081538_10000263
349 Ga0081538_10000299
350 Ga0081538_10000824
351 Ga0081538_10000941
352 Ga0081538_10001766
353 Ga0081538_10003898
354 Ga0081538_10004790
355 Ga0081538_10005425
356 Ga0081538_10019474
357 Ga0081538_10021525
358 Ga0081538_10027055
359 Ga0081540_1000089
360 Ga0081540_1002305
361 Ga0081539_10005710
362 Ga0081539_10020061
363 Ga0070717_10015951
364 Ga0070716_100000099
365 Ga0070712_100046026
366 Ga0075430_100000288
367 Ga0075430_100009816
368 Ga0075431_100013092
369 Ga0075431_100061290
370 Ga0075433_10048279
371 Ga0075434_100014955
372 Ga0075429_100052944
373 Ga0068865_100028364
374 Ga0075436_100030088
375 Ga0097620_100072787
376 Ga0075435_100042288
377 Ga0105240_10074143
378 Ga0111539_10011167
379 Ga0105245_10059238
380 Ga0105241_10055822
381 Ga0105242_10044587
382 Ga0105237_10001007
383 Ga0105249_10049099
384 Ga0105239_10065406
385 Ga0105239_10107667
386 Ga0105246_10005446
387 Ga0157372_10024174
388 Ga0163163_10017694
389 Ga0157377_10028279
390 Ga0213875_10000148
391 Ga0213875_10002779
392 Ga0207692_10000342
393 Ga0207699_10000148
394 Ga0207643_10000120
395 Ga0207705_10009437
396 Ga0207671_10000782
397 Ga0207693_10006036
398 Ga0207693_10049626
399 Ga0207663_10001571
400 Ga0207657_10009239
401 Ga0207652_10032312
402 Ga0207646_10034075
403 Ga0207650_10020798
404 Ga0207659_10024776
405 Ga0207687_10021008
406 Ga0207700_10000793
407 Ga0207664_10000246
408 Ga0207644_10043187
409 Ga0207706_10012848
410 Ga0207706_10060362
411 Ga0207704_10028444
412 Ga0207665_10023700
413 Ga0207691_10021802
414 Ga0207689_10000836
415 Ga0207689_10019536
416 Ga0207661_10018771
417 Ga0207651_10075770
418 Ga0207640_10031984
419 Ga0207677_10038698
420 Ga0207703_10043153
421 Ga0207678_10012498
422 Ga0207702_10000890
423 Ga0207641_10034692
424 Ga0207641_10042299
425 Ga0207676_10006860
426 Ga0207674_10015650
427 Ga0207674_10027469
428 Ga0207675_100000340
429 Ga0207675_100003528
430 Ga0207675_100023334
431 Ga0207675_100027743
432 Ga0207683_10001290
433 Ga0207683_10033055
434 Ga0207698_10007101
435 Ga0207428_10033879
436 Ga0268264_10032096
437 Ga0265338_10001371
438 Ga0307512_10012009
439 Ga0307513_10021011
440 Ga0307508_10021614
441 Ga0307516_10003889
442 Ga0307516_10029901
443 Ga0307409_100018500
444 Ga0307409_100045562
445 Ga0307409_100063664
446 Ga0307416_100042313
447 Ga0307415_100002054
448 Ga0307507_10000013
449 Ga0373934_0000078
450 Ga0373953_0000181
451 Ga0373954_0000607
452 Ga0373956_0000098
453 Ga0373957_0000011
454 Ga0373955_0000060
455 Ga0373962_0006146
456 Ga0373924_0000070
457 Ga0373933_0000009
458 Ga0373947_0004813
459 Ga0373937_0000110
460 Ga0373925_0000373
461 Ga0373925_0048064
462 Ga0395898_0018427
463 Ga0436364_0515656
464 Ga0436364_1105580
465 Ga0466972_0000780
466 Ga0466972_0001775
467 Ga0466965_0001827
468 Ga0466963_0054289
469 Ga0466971_0008650
470 Ga0466957_0018570
471 Ga0466967_0012999
472 Ga0466967_0013132
473 Ga0466967_0047365
474 Ga0466967_0087025
475 Ga0495592_0000049
476 Ga0495603_0001884
477 Ga0495603_0035992
478 Ga0495651_0000007
479 Ga0495651_0008149
480 Ga0495653_0000996
481 Ga0495653_0008277
482 Ga0495608_0000076
483 Ga0495608_0000665
484 Ga0495628_0020933
485 Ga0495630_0026742
486 Ga0495643_0002384
487 Ga0495652_0000168
488 Ga0495652_0009135
489 Ga0495652_0065146
490 Ga0495665_0010338
491 Ga0495640_0008704
492 Ga0495587_0000032
493 Ga0495587_0005894
494 Ga0495667_0000072
495 Ga0495667_0001873
496 Ga0495667_0029483
497 Ga0495667_0037553
498 Ga0495634_0005492
499 Ga0495635_0004429
500 Ga0495657_0000424
501 Ga0495657_0004002
502 Ga0495599_0000062
503 Ga0495599_0004623
504 Ga0495646_0039327
505 Ga0495669_0005647
506 Ga0495613_0007313
507 Ga0495624_0046817
508 Ga0495600_0000743
509 Ga0495600_0002754
510 Ga0495604_0000062
511 Ga0495676_0002823
512 Ga0495680_0000101
513 Ga0495687_002268
514 Ga0495687_003726
515 Ga0495675_0000116
516 Ga0495675_0004975
517 Ga0495675_0012751
518 Ga0495684_0005735
519 Ga0495593_0037081
520 Ga0495602_0000115
521 Ga0495602_0015475
522 Ga0496100_0001923
523 Ga0496102_0013094
524 Ga0496102_0017935
525 Ga0496103_0017239
526 Ga0496104_0013375
527 Ga0496104_0016425
528 Ga0496105_0010494
529 Ga0496105_0039061
530 Ga0496106_0008486
531 Ga0496106_0036296
532 Ga0496106_0059422
533 Ga0496108_0004450
534 Ga0496108_0006715
535 Ga0496109_0019173
536 Ga0496109_0033519
537 Ga0496109_0039625
538 Ga0496110_0000775
539 Ga0496110_0032716
540 Ga0496111_0007561
541 Ga0496112_0075902
542 Ga0496112_0091581
543 Ga0496112_0137548
544 Ga0496113_0055730
545 Ga0496114_0002709
546 Ga0496114_0056196
547 Ga0496114_0061028
548 Ga0501036_0017849
549 Ga0501039_0001113
550 Ga0501039_0037726
551 Ga0501040_0016379
552 Ga0501040_0037531
553 Ga0501040_0060696
554 Ga0501041_0032293
555 Ga0501046_0000203
556 Ga0501047_0011613
557 Ga0501047_0109280
558 Ga0501048_0056443
559 Ga0501071_0023116
560 Ga0501071_0098731
561 Ga0501072_0004723
562 Ga0501076_0148911
563 Ga0501077_0051451
564 nmdc:mga05p37_17002_c1
565 nmdc:mga08y16_47577_c1
566 nmdc:mga0n895_60517_c1
567 nmdc:mga0rr50_26302_c1
568 Ga0495601_0002093
569 Ga0495595_0000198
570 Ga0500583_0005024
571 Ga0500568_0001192
572 2623500888
573 2644278787
574 2785372990
575 2793975416
576 2804848552
577 2808903125
578 2819745088
579 2899372340
580 2917739298
581 2990064219
582 2990089385
583 2997607421
584 3006327337
585 8002782062
586 8002789464
587 8008488476
588 8025418139
589 8025527477
590 8047902707
591 8048128193
592 8048134440
593 8048370505
594 8048388917
595 8054472796
596 8055069387
597 8055179057
598 8056210050

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22613

Transketolase_C_1

Transketolase-like TK C-terminal domain

658

783

0.91

PF00456

Transketolase_N

Transketolase, thiamine diphosphate binding domain

81

274

0.85

PF17831

PDH_E1_M

Pyruvate dehydrogenase E1 component middle domain

423

618

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
6yak-assembly1.cif.gz_DDD split gene transketolase, active alpha2beta2 heterotetramer 0.8176 375 734
6yak-assembly1.cif.gz_CCC split gene transketolase, active alpha2beta2 heterotetramer 0.8171 6 354
6yak-assembly1.cif.gz_DDD split gene transketolase, active alpha2beta2 heterotetramer 0.8056 375 734
6yak-assembly1.cif.gz_CCC split gene transketolase, active alpha2beta2 heterotetramer 0.7981 6 354
6yaj-assembly1.cif.gz_AAA split gene transketolase, inactive beta4 tetramer 0.7622 377 734
ID Description Score Start End Superfamily
1l8aB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.8431 4 367 3.40.50.970
1rp7A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.8218 376 579 3.40.50.970
af_Q58094_1_274_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.8206 1 347 3.40.50.970
af_Q58094_1_274_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.815 1 347 3.40.50.970
3m7iA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.8088 9 366 3.40.50.970
ID Description Score Start End GO Terms
AF-A0A4R3I082-F1-model_v4 deleted 0.992 639 734
AF-A0A4Q3PPG5-F1-model_v4 deleted 0.9876 639 734
AF-A0A6F7W8V0-F1-model_v4 Transketolase-like C-terminal domain-containing protein 0.9785 612 735 GO:0003824
AF-A0A0Q6X9A3-F1-model_v4 Transketolase-like C-terminal domain-containing protein 0.9691 617 735 GO:0003824
AF-A0A7K2PY28-F1-model_v4 Transketolase N-terminal domain-containing protein 0.9654 115 367 GO:0000287

Map