F394663

General Info

Members Datasets Scaffolds Average Seq Length
299 161 286 432

Family's Representative Sequence

Representative Sequence 3300005336|Ga0070680_100011630|Ga0070680_1000116306
Length 485
Sequence MAGSHDFLFGKGNITLPWRAKSIDLKKNKYLCLANWASTMNLVIFTSQHRTAIRKFFLLAVLLAVQSIAYSQVMVPTDSLKADSLGKKGKKISKRAEDLSNEYDFGDLLGDILLKKKSHTSHKSSGITVVPNVAANPTIGEQLGIKAVAGRRLGDDPNTLLSVAATSASITTKGILYFYVNHNVFTPGNKWNLQGNLVIARTVTPDFGLGIGRTVTNDSQTDEILANPTHKVFTLHSLYFNAREKIYKEVAKNLFLGAGMSAEVRGDIDQKDTVNNATPMSVYNNKHGFPQDHYVSSGFLFNVQYTSRDNPNRAYKGMYFDAGIRINQTWVGSTKNAVQFTTDLRKYISLSDVSPETVLALWNWGSYLVSGTIPYLELPGTARDGSFRSGRGYTSQYFKGTEFNDTEAEFRFPILKNKFISGVIFGSMQTANDEQGTKLFQVLQPGGGAGLRVLFNKTTRTNLALDYAWGKFGNRGFFLNLNESF

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
3 2738541284 Pedobacter sp. YR016 Isolate Unclassified
4 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
5 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
6 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
7 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
8 2914759650 Rhizosphaericola mali Isolate Rhizosphere
9 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
10 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
11 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
12 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
13 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
14 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
15 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
16 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
17 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
18 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
19 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
20 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
21 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
22 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
23 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
24 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
25 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
26 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
27 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
28 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
29 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
30 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
31 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
32 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
33 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
34 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
35 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
36 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
37 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
38 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
39 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
40 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
41 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
42 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
43 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
44 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
45 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
46 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
47 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
48 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
49 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
50 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
51 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
52 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
54 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
56 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
57 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
58 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
59 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
60 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
61 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
62 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
63 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
64 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
65 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
66 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
67 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
68 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
69 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
70 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
71 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
72 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
73 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
74 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
75 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
76 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
77 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
78 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
79 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
80 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
81 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
82 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
83 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
84 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
115 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
116 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
117 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
118 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
119 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
120 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
121 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
122 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
123 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
124 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
125 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
126 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
127 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
128 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
129 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
130 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
131 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
132 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
133 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
134 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
135 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
136 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
137 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
138 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
139 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
140 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
141 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
142 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
143 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
144 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
145 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
146 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
147 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
148 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
149 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
150 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
151 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
152 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
153 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
154 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
155 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
156 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
157 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
158 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
159 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
160 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
161 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.32
Metatranscriptomes 0
Isolates 4.68

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.36
Nodule 0
Rhizoplane 0.33
Rhizosphere 79.26
Stem 0
Stem Tuber 0
Unclassified 13.04

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1307791 2162886007 Bacteria 24587
2 JGI24740J21852_10004957 3300001979 Bacteria 5660
3 JGI24740J21852_10035309 3300001979 Unclassified 1565
4 JGI24737J22298_10000022 3300001990 Bacteria 45529
5 JGI24737J22298_10027154 3300001990 Bacteria 1806
6 JGI24735J21928_10000031 3300002067 Bacteria 75354
7 JGI24735J21928_10014660 3300002067 Bacteria 2454
8 JGI25162J39368_1000108 3300002737 Bacteria 90272
9 JGI25162J39368_1001282 3300002737 Bacteria 14251
10 JGI25154J39366_1000065 3300002738 Bacteria 104126
11 JGI25164J39214_1002209 3300002772 Bacteria 3211
12 JGI25165J46597_1000899 3300003214 Bacteria 20681
13 rootH1_10000675 3300003316 Bacteria 8904
14 rootH2_10007289 3300003320 Bacteria 23271
15 rootH2_10018543 3300003320 Bacteria 23020
16 rootH2_10024181 3300003320 Bacteria 12271
17 rootH2_10050245 3300003320 Bacteria 4734
18 rootH2_10056261 3300003320 Bacteria 14958
19 rootH2_10101933 3300003320 Bacteria 7659
20 rootH2_10151451 3300003320 Bacteria 2733
21 rootL2_10084514 3300003322 Bacteria 6814
22 rootH1_10006177 3300003323 Bacteria 7966
23 rootH1_10008697 3300003323 Bacteria 8679
24 rootH1_10023196 3300003316 Bacteria 5733
25 rootH1_10023196 3300003323 Bacteria 10231
26 rootH1_10028571 3300003323 Bacteria 20032
27 JGI25160J50197_1002464 3300003354 Bacteria 8610
28 Ga0055531_10001134 3300003794 Bacteria 20604
29 Ga0065714_10002527 3300005288 Bacteria 43361
30 Ga0065714_10074170 3300005288 Bacteria 3075
31 Ga0065704_10000217 3300005289 Bacteria 101781
32 Ga0070670_100157517 3300005331 Bacteria 1967
33 Ga0070680_100011630 3300005336 Bacteria 6818
34 Ga0068868_100007238 3300005338 Bacteria 7888
35 Ga0068868_100253109 3300005338 Bacteria 1483
36 Ga0070673_100057287 3300005364 Bacteria 3078
37 Ga0070673_100160119 3300005364 Unclassified 1914
38 Ga0070659_100002519 3300005366 Bacteria 13010
39 Ga0070659_100254373 3300005366 Bacteria 1456
40 Ga0070667_100016206 3300005367 Bacteria 6166
41 Ga0070667_100054709 3300005367 Bacteria 3370
42 Ga0070681_10003297 3300005458 Bacteria 15070
43 Ga0070681_10065327 3300005458 Bacteria 3607
44 Ga0070679_100009590 3300005530 Bacteria 9156
45 Ga0068853_100001291 3300005539 Bacteria 17981
46 Ga0068853_100063504 3300005539 Bacteria 3199
47 Ga0070672_100214087 3300005543 Unclassified 1615
48 Ga0070665_100002043 3300005548 Bacteria 22717
49 Ga0068855_100000033 3300005563 Bacteria 167299
50 Ga0068855_100000071 3300005563 Bacteria 122638
51 Ga0068855_100112970 3300005563 Bacteria 3117
52 Ga0068855_100118342 3300005563 Bacteria 3034
53 Ga0068855_100321180 3300005563 Bacteria 1711
54 Ga0068857_100009507 3300005577 Bacteria 8442
55 Ga0068854_100024000 3300005578 Bacteria 4170
56 Ga0068854_100030031 3300005578 Unclassified 3767
57 Ga0068856_100000005 3300005614 Bacteria 225505
58 Ga0068856_100051008 3300005614 Unclassified 4080
59 Ga0068856_100257253 3300005614 Bacteria 1761
60 Ga0068852_100002761 3300005616 Bacteria 12162
61 Ga0068859_100000029 3300005617 Bacteria 178422
62 Ga0068859_100122730 3300005617 Unclassified 2665
63 Ga0068864_100007510 3300005618 Bacteria 8981
64 Ga0068851_10026392 3300005834 Bacteria 2854
65 Ga0068863_100001061 3300005841 Bacteria 27480
66 Ga0068863_100003266 3300005841 Bacteria 16010
67 Ga0068860_100000059 3300005843 Bacteria 196400
68 Ga0068860_100003333 3300005843 Bacteria 16537
69 Ga0068860_100011028 3300005843 Bacteria 8911
70 Ga0075366_10000091 3300006195 Bacteria 36066
71 Ga0097621_100026014 3300006237 Bacteria 4586
72 Ga0097621_100129396 3300006237 Unclassified 2147
73 Ga0068871_100007108 3300006358 Bacteria 7980
74 Ga0068871_100125826 3300006358 Unclassified 2169
75 Ga0097620_100000029 3300006931 Bacteria 178422
76 Ga0097620_100122724 3300006931 Unclassified 2665
77 Ga0105240_10002354 3300009093 Bacteria 30496
78 Ga0105240_10009313 3300009093 Bacteria 13924
79 Ga0105240_10011579 3300009093 Bacteria 12272
80 Ga0105240_10019879 3300009093 Bacteria 8970
81 Ga0105240_10039479 3300009093 Bacteria 6044
82 Ga0105240_10082072 3300009093 Bacteria 3959
83 Ga0105245_10058766 3300009098 Bacteria 3461
84 Ga0105247_10018440 3300009101 Bacteria 4185
85 Ga0105241_10000432 3300009174 Bacteria 31648
86 Ga0105241_10048913 3300009174 Bacteria 3219
87 Ga0105241_10056753 3300009174 Bacteria 3002
88 Ga0105241_10104338 3300009174 Unclassified 2258
89 Ga0105241_10107144 3300009174 Bacteria 2232
90 Ga0105237_10000128 3300009545 Bacteria 106338
91 Ga0105237_10000143 3300009545 Bacteria 101515
92 Ga0105237_10001131 3300009545 Bacteria 35787
93 Ga0105237_10001817 3300009545 Bacteria 27514
94 Ga0105237_10002076 3300009545 Bacteria 25338
95 Ga0105237_10004189 3300009545 Bacteria 16795
96 Ga0105237_10006146 3300009545 Bacteria 13419
97 Ga0105237_10015751 3300009545 Bacteria 7863
98 Ga0105237_10028541 3300009545 Bacteria 5683
99 Ga0105237_10030737 3300009545 Bacteria 5452
100 Ga0105238_10011726 3300009551 Bacteria 8835
101 Ga0105238_10023664 3300009551 Bacteria 6259
102 Ga0105249_10001545 3300009553 Bacteria 20197
103 Ga0105239_10000008 3300010375 Bacteria 376925
104 Ga0105239_10000059 3300010375 Bacteria 155685
105 Ga0105239_10000071 3300010375 Bacteria 143060
106 Ga0105239_10003259 3300010375 Bacteria 20034
107 Ga0105239_10005273 3300010375 Bacteria 15194
108 Ga0105239_10022361 3300010375 Bacteria 6972
109 Ga0105239_10025766 3300010375 Bacteria 6477
110 Ga0105239_10028391 3300010375 Bacteria 6155
111 Ga0105239_10090011 3300010375 Bacteria 3385
112 Ga0105246_10015143 3300011119 Bacteria 4863
113 Ga0157373_10000041 3300013100 Bacteria 113871
114 Ga0157373_10001855 3300013100 Bacteria 16047
115 Ga0157373_10005651 3300013100 Bacteria 9370
116 Ga0157371_10000836 3300013102 Bacteria 35185
117 Ga0157371_10000942 3300013102 Bacteria 32494
118 Ga0157371_10001078 3300013102 Bacteria 29528
119 Ga0157371_10001357 3300013102 Bacteria 25727
120 Ga0157371_10134345 3300013102 Unclassified 1761
121 Ga0157370_10012666 3300013104 Bacteria 8733
122 Ga0157370_10026527 3300013104 Bacteria 5719
123 Ga0157370_10042280 3300013104 Unclassified 4393
124 Ga0157370_10085708 3300013104 Bacteria 2960
125 Ga0157369_10000551 3300013105 Bacteria 49137
126 Ga0157369_10109540 3300013105 Bacteria 2936
127 Ga0157369_10165862 3300013105 Bacteria 2329
128 Ga0157374_10000009 3300013296 Bacteria 564330
129 Ga0157374_10079927 3300013296 Bacteria 3099
130 Ga0157378_10016455 3300013297 Bacteria 6477
131 Ga0157378_10019542 3300013297 Bacteria 5956
132 Ga0157378_10046434 3300013297 Unclassified 3861
133 Ga0163162_10000245 3300013306 Bacteria 49190
134 Ga0163162_10000396 3300013306 Bacteria 39981
135 Ga0163162_10006902 3300013306 Bacteria 11014
136 Ga0157372_10000017 3300013307 Bacteria 219543
137 Ga0157372_10000158 3300013307 Bacteria 73709
138 Ga0157372_10000555 3300013307 Bacteria 41074
139 Ga0157372_10022151 3300013307 Bacteria 6873
140 Ga0157372_10175002 3300013307 Bacteria 2484
141 Ga0157372_10311878 3300013307 Unclassified 1831
142 Ga0157375_10012275 3300013308 Bacteria 7597
143 Ga0157375_10026804 3300013308 Bacteria 5378
144 Ga0157375_10052680 3300013308 Bacteria 4001
145 Ga0163163_10208098 3300014325 Bacteria 2005
146 Ga0182008_10001429 3300014497 Bacteria 16012
147 Ga0157379_10211168 3300014968 Bacteria 1757
148 Ga0157376_10000710 3300014969 Bacteria 21549
149 Ga0157376_10004371 3300014969 Bacteria 9831
150 Ga0157376_10153539 3300014969 Unclassified 2079
151 Ga0163161_10022698 3300017792 Bacteria 4420
152 Ga0207427_100110 3300025231 Bacteria 113735
153 Ga0209437_100093 3300025233 Bacteria 239733
154 Ga0209437_100237 3300025233 Bacteria 90448
155 Ga0209646_1000002 3300025246 Bacteria 1425781
156 Ga0209026_1000216 3300025250 Bacteria 79756
157 Ga0209026_1000850 3300025250 Bacteria 16025
158 Ga0209026_1004211 3300025250 Bacteria 4380
159 Ga0209233_1000089 3300025261 Bacteria 316381
160 Ga0207426_1000002 3300025302 Bacteria 1249660
161 Ga0207426_1000236 3300025302 Bacteria 125348
162 Ga0209257_1000025 3300025304 Bacteria 724838
163 Ga0207680_10000016 3300025903 Bacteria 134657
164 Ga0207647_10000135 3300025904 Bacteria 58247
165 Ga0207647_10024839 3300025904 Bacteria 3947
166 Ga0207705_10044553 3300025909 Bacteria 3188
167 Ga0207654_10004141 3300025911 Bacteria 7310
168 Ga0207707_10090201 3300025912 Bacteria 2679
169 Ga0207695_10000446 3300025913 Bacteria 90493
170 Ga0207695_10028571 3300025913 Bacteria 6179
171 Ga0207695_10058172 3300025913 Bacteria 4013
172 Ga0207695_10182060 3300025913 Bacteria 2022
173 Ga0207695_10257668 3300025913 Bacteria 1643
174 Ga0207671_10000778 3300025914 Bacteria 40392
175 Ga0207671_10000968 3300025914 Bacteria 35551
176 Ga0207671_10001329 3300025914 Bacteria 28904
177 Ga0207671_10001567 3300025914 Bacteria 26106
178 Ga0207671_10002966 3300025914 Bacteria 17440
179 Ga0207671_10003356 3300025914 Bacteria 16059
180 Ga0207671_10008382 3300025914 Bacteria 8773
181 Ga0207671_10013833 3300025914 Bacteria 6408
182 Ga0207671_10197616 3300025914 Unclassified 1570
183 Ga0207652_10013573 3300025921 Bacteria 6589
184 Ga0207694_10023892 3300025924 Bacteria 4642
185 Ga0207650_10019481 3300025925 Bacteria 4768
186 Ga0207687_10091444 3300025927 Bacteria 2219
187 Ga0207644_10067343 3300025931 Bacteria 2610
188 Ga0207704_10123261 3300025938 Unclassified 1779
189 Ga0207691_10180644 3300025940 Unclassified 1844
190 Ga0207689_10000339 3300025942 Bacteria 43619
191 Ga0207667_10000046 3300025949 Bacteria 245420
192 Ga0207667_10000635 3300025949 Bacteria 45483
193 Ga0207667_10011398 3300025949 Bacteria 10335
194 Ga0207667_10314708 3300025949 Bacteria 1599
195 Ga0207651_10247978 3300025960 Unclassified 1455
196 Ga0207712_10021130 3300025961 Bacteria 4270
197 Ga0207640_10078362 3300025981 Unclassified 2249
198 Ga0207640_10181482 3300025981 Bacteria 1578
199 Ga0207658_10016240 3300025986 Bacteria 5119
200 Ga0207658_10024228 3300025986 Unclassified 4244
201 Ga0207703_10077458 3300026035 Unclassified 2760
202 Ga0207703_10286472 3300026035 Unclassified 1498
203 Ga0207639_10009587 3300026041 Bacteria 6685
204 Ga0207639_10101380 3300026041 Bacteria 2328
205 Ga0207702_10000249 3300026078 Bacteria 62542
206 Ga0207702_10200453 3300026078 Bacteria 1849
207 Ga0207702_10224269 3300026078 Bacteria 1753
208 Ga0207641_10000244 3300026088 Bacteria 70430
209 Ga0207641_10018608 3300026088 Bacteria 5695
210 Ga0207676_10005312 3300026095 Bacteria 9124
211 Ga0207674_10040595 3300026116 Bacteria 4820
212 Ga0207698_10004150 3300026142 Bacteria 8802
213 Ga0207698_10009109 3300026142 Bacteria 6308
214 Ga0268266_10000016 3300028379 Bacteria 629101
215 Ga0268264_10000015 3300028381 Bacteria 508501
216 Ga0268264_10005467 3300028381 Bacteria 10770
217 Ga0307517_10005985 3300028786 Bacteria 18144
218 Ga0307515_10000493 3300028794 Bacteria 94441
219 Ga0307515_10000667 3300028794 Bacteria 79135
220 Ga0307515_10000790 3300028794 Bacteria 72891
221 Ga0265338_10046326 3300028800 Bacteria 3986
222 Ga0307511_10000418 3300030521 Bacteria 45353
223 Ga0316177_1064769 3300030731 Bacteria 16424
224 Ga0316176_1167703 3300030732 Bacteria 11141
225 Ga0316181_1051489 3300030744 Bacteria 7497
226 Ga0307509_10040850 3300031507 Bacteria 5041
227 Ga0307509_10221220 3300031507 Bacteria 1706
228 Ga0307516_10006387 3300031730 Bacteria 13819
229 Ga0307516_10099871 3300031730 Bacteria 2718
230 Ga0307412_10000033 3300031911 Bacteria 206649
231 Ga0307510_10000042 3300033180 Bacteria 100951
232 Ga0307510_10000774 3300033180 Bacteria 33030
233 Ga0395899_0000017 3300037312 Bacteria 440179
234 Ga0395899_0000267 3300037312 Bacteria 68362
235 Ga0466961_0118359 3300044693 Bacteria 1664
236 Ga0466959_0000501 3300045049 Bacteria 22709
237 Ga0466958_0014309 3300045836 Bacteria 4531
238 Ga0466958_0080664 3300045836 Unclassified 2002
239 Ga0495651_0058786 3300046462 Bacteria 2949
240 Ga0495650_0000098 3300046471 Bacteria 215716
241 Ga0495585_0000029 3300046492 Bacteria 145822
242 Ga0495606_0000021 3300046507 Bacteria 271238
243 Ga0495606_0000322 3300046507 Bacteria 82446
244 Ga0495606_0036661 3300046507 Bacteria 3338
245 Ga0495606_0079675 3300046507 Bacteria 2039
246 Ga0495610_0001345 3300046512 Bacteria 21797
247 Ga0495616_0000972 3300046513 Bacteria 20531
248 Ga0495631_0013068 3300046518 Bacteria 4038
249 Ga0495648_0002284 3300046524 Bacteria 17886
250 Ga0495652_0072668 3300046529 Bacteria 2866
251 Ga0495609_0008175 3300046538 Bacteria 5140
252 Ga0495609_0029496 3300046538 Unclassified 2498
253 Ga0495609_0068104 3300046538 Bacteria 1567
254 Ga0495622_0018464 3300046557 Bacteria 3248
255 Ga0495633_0000275 3300046558 Bacteria 60032
256 Ga0495633_0005737 3300046558 Bacteria 7506
257 Ga0495668_0000017 3300046616 Bacteria 434025
258 Ga0495625_0000435 3300046660 Bacteria 62758
259 Ga0495625_0001213 3300046660 Bacteria 32692
260 Ga0495625_0001390 3300046660 Bacteria 29676
261 Ga0495625_0018957 3300046660 Bacteria 5354
262 Ga0495661_0000702 3300046665 Bacteria 33210
263 Ga0495661_0022788 3300046665 Bacteria 4071
264 Ga0495649_0000226 3300046694 Bacteria 49102
265 Ga0495672_0018693 3300047320 Bacteria 4591
266 Ga0495687_000004 3300047443 Bacteria 779298
267 Ga0495687_001385 3300047443 Bacteria 22382
268 Ga0495687_035490 3300047443 Bacteria 2241
269 Ga0495673_0020610 3300047469 Bacteria 3280
270 Ga0495686_0000128 3300047472 Bacteria 156223
271 Ga0495686_0002904 3300047472 Bacteria 15390
272 Ga0495686_0029883 3300047472 Bacteria 3542
273 Ga0496122_0005356 3300048925 Bacteria 15325
274 Ga0496123_0009042 3300048926 Bacteria 9030
275 Ga0496126_0033313 3300048929 Bacteria 4847
276 Ga0495682_0032502 3300049460 Bacteria 1927
277 Ga0501241_001133 3300049758 Bacteria 5573
278 nmdc:mga0k408_36764_c1 3300050493 Bacteria 2811
279 nmdc:mga0k408_490_c1 3300050493 Bacteria 21695
280 Ga0500635_0001281 3300053080 Bacteria 6004
281 Ga0500646_0006539 3300053090 Unclassified 2965
282 Ga0500608_000428 3300053122 Bacteria 15994
283 Ga0500608_031700 3300053122 Bacteria 2510
284 Ga0500618_000539 3300053125 Bacteria 23530
285 Ga0500622_0002896 3300053156 Bacteria 11968
286 Ga0466962_0003268 3300061719 Bacteria 7701

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300005539 Ga0068853_100001291 Ga0068853_10000129119 342
2 3300025924 Ga0207694_10023892 Ga0207694_100238922 342
3 3300009093 Ga0105240_10009313 Ga0105240_100093138 380
4 3300025913 Ga0207695_10000446 Ga0207695_1000044660 380
5 3300005331 Ga0070670_100157517 Ga0070670_1001575172 381
6 3300003354 JGI25160J50197_1002464 JGI25160J50197_10024648 384
7 3300025302 Ga0207426_1000002 Ga0207426_1000002462 384
8 3300009551 Ga0105238_10023664 Ga0105238_100236643 387
9 3300026041 Ga0207639_10009587 Ga0207639_100095874 387
10 3300002737 JGI25162J39368_1000108 JGI25162J39368_100010864 389
11 3300013296 Ga0157374_10000009 Ga0157374_10000009398 389
12 3300014969 Ga0157376_10004371 Ga0157376_100043717 389
13 3300025233 Ga0209437_100237 Ga0209437_10023761 389
14 3300025912 Ga0207707_10090201 Ga0207707_100902012 390
15 3300025909 Ga0207705_10044553 Ga0207705_100445532 391
16 3300005338 Ga0068868_100007238 Ga0068868_1000072387 392
17 3300005364 Ga0070673_100057287 Ga0070673_1000572873 392
18 3300005834 Ga0068851_10026392 Ga0068851_100263924 392
19 3300013297 Ga0157378_10016455 Ga0157378_100164555 392
20 3300013308 Ga0157375_10012275 Ga0157375_100122752 392
21 3300013308 Ga0157375_10052680 Ga0157375_100526806 392
22 3300014968 Ga0157379_10211168 Ga0157379_102111681 392
23 3300025931 Ga0207644_10067343 Ga0207644_100673432 392
24 3300037312 Ga0395899_0000017 Ga0395899_0000017_21043_22269 392
25 3300046512 Ga0495610_0001345 Ga0495610_0001345_8782_10011 392
26 3300046558 Ga0495633_0005737 Ga0495633_0005737_533_1762 392
27 3300046665 Ga0495661_0022788 Ga0495661_0022788_803_2032 392
28 3300047443 Ga0495687_001385 Ga0495687_001385_17044_18267 392
29 3300005841 Ga0068863_100003266 Ga0068863_10000326616 393
30 3300014325 Ga0163163_10208098 Ga0163163_102080982 393
31 3300026088 Ga0207641_10018608 Ga0207641_100186083 393
32 3300053080 Ga0500635_0001281 Ga0500635_0001281_109_1431 393
33 iso_pu_bacteria 2929239360 2929239688 393
34 3300009174 Ga0105241_10048913 Ga0105241_100489134 394
35 3300028800 Ga0265338_10046326 Ga0265338_100463264 394
36 3300005458 Ga0070681_10065327 Ga0070681_100653273 395
37 3300005843 Ga0068860_100003333 Ga0068860_10000333310 395
38 3300009093 Ga0105240_10011579 Ga0105240_100115796 395
39 3300009545 Ga0105237_10015751 Ga0105237_100157512 395
40 3300009551 Ga0105238_10011726 Ga0105238_100117263 395
41 3300028381 Ga0268264_10005467 Ga0268264_100054677 395
42 3300044693 Ga0466961_0118359 Ga0466961_0118359_428_1651 395
43 3300005367 Ga0070667_100016206 Ga0070667_1000162065 397
44 3300005548 Ga0070665_100002043 Ga0070665_10000204314 397
45 3300005617 Ga0068859_100122730 Ga0068859_1001227302 397
46 3300006931 Ga0097620_100122724 Ga0097620_1001227242 397
47 3300025925 Ga0207650_10019481 Ga0207650_100194816 397
48 3300025986 Ga0207658_10024228 Ga0207658_100242284 397
49 3300028379 Ga0268266_10000016 Ga0268266_10000016511 397
50 3300028794 Ga0307515_10000493 Ga0307515_1000049335 400
51 3300030521 Ga0307511_10000418 Ga0307511_1000041829 400
52 3300005364 Ga0070673_100160119 Ga0070673_1001601192 401
53 3300005843 Ga0068860_100011028 Ga0068860_1000110286 401
54 3300025960 Ga0207651_10247978 Ga0207651_102479781 401
55 3300005367 Ga0070667_100054709 Ga0070667_1000547092 402
56 3300005543 Ga0070672_100214087 Ga0070672_1002140872 402
57 3300005616 Ga0068852_100002761 Ga0068852_1000027615 402
58 3300005617 Ga0068859_100000029 Ga0068859_10000002972 402
59 3300005618 Ga0068864_100007510 Ga0068864_1000075103 402
60 3300005841 Ga0068863_100001061 Ga0068863_10000106113 402
61 3300006931 Ga0097620_100000029 Ga0097620_10000002972 402
62 3300009098 Ga0105245_10058766 Ga0105245_100587663 402
63 3300009101 Ga0105247_10018440 Ga0105247_100184402 402
64 3300009174 Ga0105241_10000432 Ga0105241_100004325 402
65 3300009545 Ga0105237_10002076 Ga0105237_1000207616 402
66 3300009553 Ga0105249_10001545 Ga0105249_100015459 402
67 3300010375 Ga0105239_10000008 Ga0105239_10000008296 402
68 3300010375 Ga0105239_10090011 Ga0105239_100900112 402
69 3300011119 Ga0105246_10015143 Ga0105246_100151433 402
70 3300013296 Ga0157374_10079927 Ga0157374_100799272 402
71 3300013306 Ga0163162_10000245 Ga0163162_1000024538 402
72 3300014969 Ga0157376_10153539 Ga0157376_101535392 402
73 3300025903 Ga0207680_10000016 Ga0207680_1000001643 402
74 3300025911 Ga0207654_10004141 Ga0207654_100041412 402
75 3300025914 Ga0207671_10000778 Ga0207671_1000077818 402
76 3300025927 Ga0207687_10091444 Ga0207687_100914442 402
77 3300025940 Ga0207691_10180644 Ga0207691_101806441 402
78 3300025942 Ga0207689_10000339 Ga0207689_1000033914 402
79 3300025961 Ga0207712_10021130 Ga0207712_100211302 402
80 3300025986 Ga0207658_10016240 Ga0207658_100162403 402
81 3300026035 Ga0207703_10077458 Ga0207703_100774581 402
82 3300026088 Ga0207641_10000244 Ga0207641_1000024419 402
83 3300026095 Ga0207676_10005312 Ga0207676_100053126 402
84 3300026142 Ga0207698_10009109 Ga0207698_100091095 402
85 3300003320 rootH2_10007289 rootH2_1000728912 403
86 3300014969 Ga0157376_10000710 Ga0157376_1000071019 403
87 3300025938 Ga0207704_10123261 Ga0207704_101232612 403
88 3300045049 Ga0466959_0000501 Ga0466959_0000501_5667_6914 403
89 3300045836 Ga0466958_0014309 Ga0466958_0014309_2937_4184 403
90 3300061719 Ga0466962_0003268 Ga0466962_0003268_3835_5082 403
91 iso_pu_bacteria 2919437846 2919438485 403
92 3300003323 rootH1_10008697 rootH1_100086972 404
93 3300005366 Ga0070659_100254373 Ga0070659_1002543731 404
94 3300005539 Ga0068853_100063504 Ga0068853_1000635041 404
95 3300005563 Ga0068855_100118342 Ga0068855_1001183424 404
96 3300005578 Ga0068854_100024000 Ga0068854_1000240005 404
97 3300005614 Ga0068856_100257253 Ga0068856_1002572531 404
98 3300009093 Ga0105240_10039479 Ga0105240_100394794 404
99 3300009093 Ga0105240_10082072 Ga0105240_100820723 404
100 3300009174 Ga0105241_10056753 Ga0105241_100567534 404
101 3300009545 Ga0105237_10001817 Ga0105237_100018179 404
102 3300013104 Ga0157370_10012666 Ga0157370_100126663 404
103 3300013105 Ga0157369_10109540 Ga0157369_101095404 404
104 3300013307 Ga0157372_10022151 Ga0157372_100221512 404
105 3300025904 Ga0207647_10024839 Ga0207647_100248395 404
106 3300025913 Ga0207695_10182060 Ga0207695_101820603 404
107 3300025914 Ga0207671_10001567 Ga0207671_100015679 404
108 3300025949 Ga0207667_10011398 Ga0207667_100113986 404
109 3300025981 Ga0207640_10181482 Ga0207640_101814821 404
110 3300026041 Ga0207639_10101380 Ga0207639_101013801 404
111 3300026078 Ga0207702_10224269 Ga0207702_102242692 404
112 3300026142 Ga0207698_10004150 Ga0207698_100041505 404
113 3300046524 Ga0495648_0002284 Ga0495648_0002284_8300_9568 404
114 3300053090 Ga0500646_0006539 Ga0500646_0006539_400_1668 404
115 3300053156 Ga0500622_0002896 Ga0500622_0002896_8885_10153 404
116 3300003322 rootL2_10084514 rootL2_100845146 405
117 3300013297 Ga0157378_10019542 Ga0157378_100195426 405
118 3300030731 Ga0316177_1064769 Ga0316177_106476912 405
119 3300030732 Ga0316176_1167703 Ga0316176_11677038 405
120 3300046507 Ga0495606_0079675 Ga0495606_0079675_62_1336 405
121 3300003320 rootH2_10024181 rootH2_100241813 406
122 3300010375 Ga0105239_10000071 Ga0105239_10000071105 406
123 3300030744 Ga0316181_1051489 Ga0316181_10514893 406
124 iso_pu_bacteria 2852627209 2852628406 406
125 3300003794 Ga0055531_10001134 Ga0055531_100011347 407
126 3300009545 Ga0105237_10000143 Ga0105237_1000014353 407
127 3300013100 Ga0157373_10005651 Ga0157373_100056513 407
128 3300014497 Ga0182008_10001429 Ga0182008_100014299 407
129 3300017792 Ga0163161_10022698 Ga0163161_100226983 407
130 3300025304 Ga0209257_1000025 Ga0209257_1000025592 407
131 3300025914 Ga0207671_10000968 Ga0207671_1000096811 407
132 3300033180 Ga0307510_10000042 Ga0307510_1000004272 407
133 3300046492 Ga0495585_0000029 Ga0495585_0000029_64924_66198 407
134 3300046538 Ga0495609_0029496 Ga0495609_0029496_102_1364 407
135 3300047472 Ga0495686_0000128 Ga0495686_0000128_40866_42194 407
136 3300048925 Ga0496122_0005356 Ga0496122_0005356_4959_6272 407
137 3300048926 Ga0496123_0009042 Ga0496123_0009042_186_1499 407
138 3300048929 Ga0496126_0033313 Ga0496126_0033313_3097_4443 407
139 3300049758 Ga0501241_001133 Ga0501241_001133_1586_2920 407
140 iso_pu_bacteria 2738541284 2738761196 407
141 3300002738 JGI25154J39366_1000065 JGI25154J39366_100006552 408
142 3300005336 Ga0070680_100011630 Ga0070680_1000116306 408
143 3300005458 Ga0070681_10003297 Ga0070681_100032977 408
144 3300005530 Ga0070679_100009590 Ga0070679_1000095902 408
145 3300005578 Ga0068854_100030031 Ga0068854_1000300312 408
146 3300006237 Ga0097621_100129396 Ga0097621_1001293961 408
147 3300006358 Ga0068871_100125826 Ga0068871_1001258261 408
148 3300009093 Ga0105240_10019879 Ga0105240_100198799 408
149 3300009174 Ga0105241_10107144 Ga0105241_101071442 408
150 3300009545 Ga0105237_10006146 Ga0105237_100061469 408
151 3300009545 Ga0105237_10028541 Ga0105237_100285413 408
152 3300009545 Ga0105237_10030737 Ga0105237_100307374 408
153 3300010375 Ga0105239_10003259 Ga0105239_100032591 408
154 3300010375 Ga0105239_10022361 Ga0105239_100223615 408
155 3300013102 Ga0157371_10001357 Ga0157371_1000135715 408
156 3300013105 Ga0157369_10000551 Ga0157369_1000055115 408
157 3300013297 Ga0157378_10046434 Ga0157378_100464343 408
158 3300013307 Ga0157372_10000017 Ga0157372_1000001774 408
159 3300013308 Ga0157375_10026804 Ga0157375_100268047 408
160 3300025246 Ga0209646_1000002 Ga0209646_10000021177 408
161 3300025250 Ga0209026_1000216 Ga0209026_100021646 408
162 3300025913 Ga0207695_10028571 Ga0207695_100285716 408
163 3300025913 Ga0207695_10058172 Ga0207695_100581722 408
164 3300025914 Ga0207671_10002966 Ga0207671_100029664 408
165 3300025914 Ga0207671_10008382 Ga0207671_100083823 408
166 3300025914 Ga0207671_10013833 Ga0207671_100138332 408
167 3300025921 Ga0207652_10013573 Ga0207652_100135733 408
168 3300025981 Ga0207640_10078362 Ga0207640_100783621 408
169 3300026035 Ga0207703_10286472 Ga0207703_102864721 408
170 3300026078 Ga0207702_10200453 Ga0207702_102004531 408
171 3300031730 Ga0307516_10099871 Ga0307516_100998711 408
172 3300037312 Ga0395899_0000267 Ga0395899_0000267_62157_63485 408
173 3300045836 Ga0466958_0080664 Ga0466958_0080664_71_1399 408
174 3300046462 Ga0495651_0058786 Ga0495651_0058786_998_2335 408
175 3300046507 Ga0495606_0036661 Ga0495606_0036661_1761_3089 408
176 3300046518 Ga0495631_0013068 Ga0495631_0013068_2329_3660 408
177 3300046529 Ga0495652_0072668 Ga0495652_0072668_1150_2487 408
178 3300053122 Ga0500608_031700 Ga0500608_031700_288_1625 408
179 iso_pu_bacteria 2914759650 2914762074 408
180 iso_pu_bacteria 2977232053 2977234379 408
181 2162886007 SwRhRL2b_contig_1307791 SwRhRL2b_0035.00002520 409
182 3300001979 JGI24740J21852_10004957 JGI24740J21852_100049572 409
183 3300001979 JGI24740J21852_10035309 JGI24740J21852_100353091 409
184 3300001990 JGI24737J22298_10000022 JGI24737J22298_1000002216 409
185 3300001990 JGI24737J22298_10027154 JGI24737J22298_100271542 409
186 3300002067 JGI24735J21928_10000031 JGI24735J21928_1000003134 409
187 3300002067 JGI24735J21928_10014660 JGI24735J21928_100146602 409
188 3300002737 JGI25162J39368_1001282 JGI25162J39368_10012829 409
189 3300002772 JGI25164J39214_1002209 JGI25164J39214_10022092 409
190 3300003214 JGI25165J46597_1000899 JGI25165J46597_100089917 409
191 3300003316 rootH1_10000675 rootH1_100006752 409
192 3300003320 rootH2_10018543 rootH2_100185432 409
193 3300003320 rootH2_10050245 rootH2_100502453 409
194 3300003320 rootH2_10056261 rootH2_100562614 409
195 3300003320 rootH2_10101933 rootH2_101019333 409
196 3300003320 rootH2_10151451 rootH2_101514511 409
197 3300003323 rootH1_10006177 rootH1_100061774 409
198 3300003323 rootH1_10023196 rootH1_100231968 409
199 3300003323 rootH1_10028571 rootH1_100285718 409
200 3300005288 Ga0065714_10002527 Ga0065714_1000252720 409
201 3300005288 Ga0065714_10074170 Ga0065714_100741704 409
202 3300005289 Ga0065704_10000217 Ga0065704_1000021737 409
203 3300005338 Ga0068868_100253109 Ga0068868_1002531091 409
204 3300005366 Ga0070659_100002519 Ga0070659_1000025196 409
205 3300005563 Ga0068855_100000033 Ga0068855_100000033106 409
206 3300005563 Ga0068855_100000071 Ga0068855_10000007156 409
207 3300005563 Ga0068855_100112970 Ga0068855_1001129703 409
208 3300005563 Ga0068855_100321180 Ga0068855_1003211801 409
209 3300005577 Ga0068857_100009507 Ga0068857_1000095075 409
210 3300005614 Ga0068856_100000005 Ga0068856_100000005141 409
211 3300005614 Ga0068856_100051008 Ga0068856_1000510082 409
212 3300005843 Ga0068860_100000059 Ga0068860_100000059124 409
213 3300006195 Ga0075366_10000091 Ga0075366_1000009132 409
214 3300006237 Ga0097621_100026014 Ga0097621_1000260143 409
215 3300006358 Ga0068871_100007108 Ga0068871_1000071084 409
216 3300009093 Ga0105240_10002354 Ga0105240_1000235416 409
217 3300009174 Ga0105241_10104338 Ga0105241_101043382 409
218 3300009545 Ga0105237_10000128 Ga0105237_1000012841 409
219 3300009545 Ga0105237_10001131 Ga0105237_1000113121 409
220 3300009545 Ga0105237_10004189 Ga0105237_100041898 409
221 3300010375 Ga0105239_10000059 Ga0105239_1000005926 409
222 3300010375 Ga0105239_10005273 Ga0105239_100052739 409
223 3300010375 Ga0105239_10025766 Ga0105239_100257662 409
224 3300010375 Ga0105239_10028391 Ga0105239_100283917 409
225 3300013100 Ga0157373_10000041 Ga0157373_1000004138 409
226 3300013100 Ga0157373_10001855 Ga0157373_100018557 409
227 3300013102 Ga0157371_10000836 Ga0157371_1000083632 409
228 3300013102 Ga0157371_10000942 Ga0157371_1000094214 409
229 3300013102 Ga0157371_10001078 Ga0157371_100010787 409
230 3300013102 Ga0157371_10134345 Ga0157371_101343452 409
231 3300013104 Ga0157370_10026527 Ga0157370_100265272 409
232 3300013104 Ga0157370_10042280 Ga0157370_100422802 409
233 3300013104 Ga0157370_10085708 Ga0157370_100857082 409
234 3300013105 Ga0157369_10165862 Ga0157369_101658622 409
235 3300013306 Ga0163162_10000396 Ga0163162_100003962 409
236 3300013306 Ga0163162_10006902 Ga0163162_100069023 409
237 3300013307 Ga0157372_10000158 Ga0157372_1000015853 409
238 3300013307 Ga0157372_10000555 Ga0157372_1000055536 409
239 3300013307 Ga0157372_10175002 Ga0157372_101750021 409
240 3300013307 Ga0157372_10311878 Ga0157372_103118781 409
241 3300025231 Ga0207427_100110 Ga0207427_10011062 409
242 3300025233 Ga0209437_100093 Ga0209437_100093152 409
243 3300025250 Ga0209026_1000850 Ga0209026_100085014 409
244 3300025250 Ga0209026_1004211 Ga0209026_10042112 409
245 3300025261 Ga0209233_1000089 Ga0209233_1000089184 409
246 3300025302 Ga0207426_1000236 Ga0207426_100023686 409
247 3300025904 Ga0207647_10000135 Ga0207647_1000013544 409
248 3300025913 Ga0207695_10257668 Ga0207695_102576681 409
249 3300025914 Ga0207671_10001329 Ga0207671_1000132911 409
250 3300025914 Ga0207671_10003356 Ga0207671_100033564 409
251 3300025914 Ga0207671_10197616 Ga0207671_101976161 409
252 3300025949 Ga0207667_10000046 Ga0207667_10000046182 409
253 3300025949 Ga0207667_10000635 Ga0207667_1000063516 409
254 3300025949 Ga0207667_10314708 Ga0207667_103147081 409
255 3300026078 Ga0207702_10000249 Ga0207702_1000024960 409
256 3300026116 Ga0207674_10040595 Ga0207674_100405954 409
257 3300028381 Ga0268264_10000015 Ga0268264_10000015349 409
258 3300028786 Ga0307517_10005985 Ga0307517_100059854 409
259 3300028794 Ga0307515_10000667 Ga0307515_1000066722 409
260 3300028794 Ga0307515_10000790 Ga0307515_1000079060 409
261 3300031507 Ga0307509_10040850 Ga0307509_100408505 409
262 3300031507 Ga0307509_10221220 Ga0307509_102212202 409
263 3300031730 Ga0307516_10006387 Ga0307516_1000638711 409
264 3300031911 Ga0307412_10000033 Ga0307412_1000003370 409
265 3300033180 Ga0307510_10000774 Ga0307510_1000077420 409
266 3300046471 Ga0495650_0000098 Ga0495650_0000098_65767_67113 409
267 3300046507 Ga0495606_0000021 Ga0495606_0000021_130646_131992 409
268 3300046507 Ga0495606_0000322 Ga0495606_0000322_69193_70521 409
269 3300046513 Ga0495616_0000972 Ga0495616_0000972_10238_11584 409
270 3300046538 Ga0495609_0008175 Ga0495609_0008175_2817_4106 409
271 3300046538 Ga0495609_0068104 Ga0495609_0068104_162_1508 409
272 3300046557 Ga0495622_0018464 Ga0495622_0018464_148_1437 409
273 3300046558 Ga0495633_0000275 Ga0495633_0000275_37514_38803 409
274 3300046616 Ga0495668_0000017 Ga0495668_0000017_242518_243807 409
275 3300046660 Ga0495625_0000435 Ga0495625_0000435_43552_44904 409
276 3300046660 Ga0495625_0001213 Ga0495625_0001213_2641_3993 409
277 3300046660 Ga0495625_0001390 Ga0495625_0001390_23961_25307 409
278 3300046660 Ga0495625_0018957 Ga0495625_0018957_1586_2941 409
279 3300046665 Ga0495661_0000702 Ga0495661_0000702_7898_9232 409
280 3300046694 Ga0495649_0000226 Ga0495649_0000226_23895_25241 409
281 3300047320 Ga0495672_0018693 Ga0495672_0018693_29_1330 409
282 3300047443 Ga0495687_000004 Ga0495687_000004_670574_671905 409
283 3300047443 Ga0495687_035490 Ga0495687_035490_572_1918 409
284 3300047469 Ga0495673_0020610 Ga0495673_0020610_1883_3229 409
285 3300047472 Ga0495686_0002904 Ga0495686_0002904_7354_8682 409
286 3300047472 Ga0495686_0029883 Ga0495686_0029883_1057_2403 409
287 3300049460 Ga0495682_0032502 Ga0495682_0032502_326_1678 409
288 3300050493 nmdc:mga0k408_36764_c1 nmdc:mga0k408_36764_c1_1150_2496 409
289 3300050493 nmdc:mga0k408_490_c1 nmdc:mga0k408_490_c1_12905_14257 409
290 3300053122 Ga0500608_000428 Ga0500608_000428_13412_14749 409
291 3300053125 Ga0500618_000539 Ga0500618_000539_16404_17741 409
292 iso_pu_bacteria 2599185184 2599481351 409
293 iso_pu_bacteria 2842903701 2842906285 409
294 iso_pu_bacteria 2852623160 2852626461 409
295 iso_pu_bacteria 2884933994 2884934887 409
296 iso_pu_bacteria 2928078545 2928081954 409
297 iso_pu_bacteria 2928147474 2928151970 409
298 iso_pu_bacteria 2932082852 2932088156 409
299 iso_pu_bacteria 8003151029 8003153545 409

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01103

Omp85

Omp85 superfamily domain

239

485

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
4n74-assembly1.cif.gz_A crystal structure of outer membrane protein tama beta-barrel domain in e.coli 0.6816 52 406
4c00-assembly1.cif.gz_A crystal structure of tama from e. coli 0.6776 50 409
4n74-assembly1.cif.gz_A crystal structure of outer membrane protein tama beta-barrel domain in e.coli 0.6706 52 406
4qky-assembly1.cif.gz_A crystal structure analysis of the membrane transporter fhac 0.6232 55 409
6wim-assembly1.cif.gz_A cdib from escherichia coli 0.614 49 405
ID Description Score Start End Superfamily
4c00A04 Mainly Beta;Beta Barrel;Porin;membrane protein fhac: a member of the omp85/tpsb transporter family 0.6761 50 409 2.40.160.50
4c00A04 Mainly Beta;Beta Barrel;Porin;membrane protein fhac: a member of the omp85/tpsb transporter family 0.6743 50 409 2.40.160.50
af_Q9FHQ9_1_163_2.40.160.10 Mainly Beta;Beta Barrel;Porin;Porin 0.6467 52 296 2.40.160.10
af_P46576_102_433_2.40.160.50 Mainly Beta;Beta Barrel;Porin;membrane protein fhac: a member of the omp85/tpsb transporter family 0.6406 53 406 2.40.160.50
af_P46576_102_433_2.40.160.50 Mainly Beta;Beta Barrel;Porin;membrane protein fhac: a member of the omp85/tpsb transporter family 0.6373 53 406 2.40.160.50
ID Description Score Start End GO Terms
AF-A0A4Q3C412-F1-model_v4 Bacterial surface antigen (D15) domain-containing protein 0.9432 109 409 GO:0019867
AF-A0A1H0TV27-F1-model_v4 Surface antigen 0.9419 23 409
AF-A0A5M9H3Q7-F1-model_v4 BamA/TamA family outer membrane protein 0.9402 30 409 GO:0019867
AF-A0A4Q3C412-F1-model_v4 Bacterial surface antigen (D15) domain-containing protein 0.9401 109 409 GO:0019867
AF-A0A5M9H3Q7-F1-model_v4 BamA/TamA family outer membrane protein 0.9354 30 409 GO:0019867

Feature Viewer

pLDDT pTM Quality
80.92 0.8 High
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Predicted Structure (AlphaFold2)

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