F391711

General Info

Members Datasets Scaffolds Average Seq Length
293 184 586 256

Family's Representative Sequence

Representative Sequence 3300048917|Ga0496114_0025124|Ga0496114_0025124_1895_2737
Length 280
Sequence VSTRASQFSAGVEAREKLSPHLVRLTLSVDPGFTSTGVLDEWVGLVVPGQFQSRYYTVRSYAGSELVLDVVLHDVGLVTEWVLRDDCVGSTVTVSEPKGSYALPEGARWQLLVGDLTGLPAMARIAEASGLPTRIWAEVPDLLPSYLPASAEATWLESPADGSSRLAEVVESIDWPPGEGYFWMAGESAQMRAIRKHLMRERKLPATAYDVMGYWRSSTGRQPRAVDPGPIWREGKAQGLSDEQIWARYDSIPDDPEPPRLRSSASRSSGDPGTAYEARS

Samples

Sample ID Description Type Environment
1 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
27 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
32 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
33 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
34 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
35 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
38 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
39 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
40 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
43 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
44 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
45 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
46 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
47 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
48 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
49 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
50 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
77 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
78 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
79 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
80 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
81 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
82 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
83 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
84 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
85 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
86 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
87 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
88 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
89 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
90 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
91 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
92 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
93 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
94 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
95 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
96 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
97 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
98 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
99 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
100 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
101 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
102 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
103 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
104 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
105 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
106 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
107 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
108 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
109 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
110 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
111 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
112 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
113 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
114 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
115 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
116 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
117 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
118 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
119 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
120 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
121 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
122 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
123 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
124 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
125 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
126 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
141 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
142 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
143 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
144 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
145 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
146 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
147 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
148 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
149 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
150 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
151 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
152 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
155 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
156 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
157 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
158 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
159 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
160 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
161 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
162 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
163 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
164 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
165 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
166 2643221561 Nocardioides sp. Root151 Isolate Unclassified
167 2643221576 Nocardioides sp. Root614 Isolate Unclassified
168 2643221590 Nocardioides sp. Root682 Isolate Unclassified
169 2643221604 Nocardioides sp. Root190 Isolate Unclassified
170 2643221617 Nocardioides sp. Root79 Isolate Unclassified
171 2643221620 Nocardioides sp. Root240 Isolate Unclassified
172 2643221641 Nocardioides sp. Root122 Isolate Unclassified
173 2643221696 Nocardioides sp. Root140 Isolate Unclassified
174 2738541305 Nocardioides sp. CF167 Isolate Unclassified
175 2739367898 Nocardioides sp. CF479 Isolate Unclassified
176 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
177 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
178 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
179 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
180 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
181 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
182 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
183 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
184 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root

Type Distribution

Type Percentage (%)
Metagenomes 93.17
Metatranscriptomes 0.34
Isolates 6.48

Biome Distribution

Category Percentage (%)
Aerial Root 0.68
Bulb 0
Endosphere 11.6
Nodule 0
Rhizoplane 12.63
Rhizosphere 67.24
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496114_0025124 3300048917 Bacteria 4867
2 JGI24740J21852_10055128 3300001979 Bacteria 1120
3 JGI24735J21928_10005169 3300002067 Bacteria 4342
4 rootH2_10253182 3300003320 Bacteria 1171
5 Ga0006562J51391_1079336 3300003578 Bacteria 1272
6 Ga0070658_10051919 3300005327 Bacteria 3324
7 Ga0070676_10099632 3300005328 Bacteria 1793
8 Ga0070683_100000705 3300005329 Bacteria 24278
9 Ga0070683_100037409 3300005329 Bacteria 4443
10 Ga0068869_100144172 3300005334 Bacteria 1842
11 Ga0070682_100011162 3300005337 Bacteria 5125
12 Ga0070659_100316925 3300005366 Bacteria 1303
13 Ga0070659_100319819 3300005366 Bacteria 1297
14 Ga0070701_10239683 3300005438 Bacteria 1090
15 Ga0070708_100467455 3300005445 Bacteria 1190
16 Ga0070663_100101977 3300005455 Bacteria 2143
17 Ga0070707_100087087 3300005468 Bacteria 3021
18 Ga0070698_100005194 3300005471 Bacteria 14242
19 Ga0070679_100011811 3300005530 Bacteria 8330
20 Ga0070684_100000618 3300005535 Bacteria 24517
21 Ga0068853_100134810 3300005539 Bacteria 2213
22 Ga0070672_100436914 3300005543 Bacteria 1126
23 Ga0070665_100009441 3300005548 Bacteria 9871
24 Ga0070665_100138733 3300005548 Bacteria 2435
25 Ga0068855_100857564 3300005563 Bacteria 962
26 Ga0070664_100063180 3300005564 Bacteria 3157
27 Ga0070664_100070620 3300005564 Bacteria 2991
28 Ga0068857_100003249 3300005577 Bacteria 13504
29 Ga0068856_100048797 3300005614 Bacteria 4173
30 Ga0068856_100450593 3300005614 Bacteria 1308
31 Ga0068861_100117924 3300005719 Bacteria 2137
32 Ga0068870_10408514 3300005840 Bacteria 885
33 Ga0068858_100047823 3300005842 Bacteria 3965
34 Ga0068860_100006533 3300005843 Bacteria 11704
35 Ga0068862_100137012 3300005844 Bacteria 2170
36 Ga0075365_10008659 3300006038 Bacteria 5794
37 Ga0075365_10023741 3300006038 Bacteria 3860
38 Ga0075365_10049950 3300006038 Bacteria 2757
39 Ga0075365_10050278 3300006038 Bacteria 2749
40 Ga0075363_100003383 3300006048 Bacteria 6778
41 Ga0075363_100048203 3300006048 Bacteria 2264
42 Ga0075363_100071436 3300006048 Bacteria 1886
43 Ga0075363_100083441 3300006048 Bacteria 1751
44 Ga0075364_10089306 3300006051 Bacteria 2043
45 Ga0075364_10153648 3300006051 Bacteria 1551
46 Ga0075367_10011245 3300006178 Bacteria 4727
47 Ga0075367_10014149 3300006178 Bacteria 4312
48 Ga0075370_10007515 3300006353 Bacteria 5554
49 Ga0075370_10113828 3300006353 Bacteria 1572
50 Ga0068871_100248795 3300006358 Bacteria 1548
51 Ga0068865_100021340 3300006881 Bacteria 4210
52 Ga0068865_100279448 3300006881 Bacteria 1329
53 Ga0105243_10268118 3300009148 Bacteria 1532
54 Ga0105248_11121634 3300009177 Bacteria 889
55 Ga0105249_10021209 3300009553 Bacteria 5816
56 Ga0105239_10023179 3300010375 Bacteria 6842
57 Ga0105239_10156529 3300010375 Bacteria 2545
58 Ga0105246_10001084 3300011119 Bacteria 15747
59 Ga0105246_10199980 3300011119 Bacteria 1553
60 Ga0157369_11010348 3300013105 Bacteria 851
61 Ga0163162_10007664 3300013306 Bacteria 10512
62 Ga0157372_10002275 3300013307 Bacteria 20816
63 Ga0157372_11290743 3300013307 Bacteria 842
64 Ga0157375_10009438 3300013308 Bacteria 8566
65 Ga0157379_10023721 3300014968 Bacteria 5446
66 Ga0157376_10259342 3300014969 Bacteria 1628
67 Ga0157376_10392255 3300014969 Bacteria 1340
68 Ga0163161_10337027 3300017792 Bacteria 1196
69 Ga0207642_10103601 3300025899 Bacteria 1434
70 Ga0207647_10011612 3300025904 Bacteria 6168
71 Ga0207647_10047544 3300025904 Bacteria 2668
72 Ga0207643_10373825 3300025908 Bacteria 898
73 Ga0207705_10044495 3300025909 Bacteria 3191
74 Ga0207660_10453313 3300025917 Bacteria 1037
75 Ga0207652_10014910 3300025921 Bacteria 6302
76 Ga0207694_10142676 3300025924 Bacteria 1926
77 Ga0207659_10489987 3300025926 Bacteria 1039
78 Ga0207690_10067773 3300025932 Bacteria 2449
79 Ga0207706_10279914 3300025933 Bacteria 1455
80 Ga0207709_10204317 3300025935 Bacteria 1413
81 Ga0207704_10342285 3300025938 Bacteria 1161
82 Ga0207691_10321617 3300025940 Bacteria 1326
83 Ga0207689_10131931 3300025942 Bacteria 2056
84 Ga0207661_10003929 3300025944 Bacteria 10378
85 Ga0207679_10069563 3300025945 Bacteria 2649
86 Ga0207712_10172390 3300025961 Bacteria 1692
87 Ga0207703_10101332 3300026035 Bacteria 2441
88 Ga0207639_10088515 3300026041 Bacteria 2471
89 Ga0207678_10281834 3300026067 Bacteria 1426
90 Ga0207676_10014046 3300026095 Bacteria 5752
91 Ga0207674_10001564 3300026116 Bacteria 29469
92 Ga0207675_100049145 3300026118 Bacteria 3937
93 Ga0207683_10079666 3300026121 Bacteria 2904
94 Ga0268266_10022246 3300028379 Bacteria 5402
95 Ga0268264_10000695 3300028381 Bacteria 39117
96 Ga0307408_100329989 3300031548 Bacteria 1288
97 Ga0307405_10032950 3300031731 Bacteria 3068
98 Ga0307405_10145527 3300031731 Bacteria 1659
99 Ga0307413_10099692 3300031824 Bacteria 1916
100 Ga0307406_10337305 3300031901 Bacteria 1173
101 Ga0307407_10037364 3300031903 Bacteria 2683
102 Ga0307412_10018364 3300031911 Bacteria 4207
103 Ga0307412_10158151 3300031911 Bacteria 1680
104 Ga0307409_100001390 3300031995 Bacteria 11831
105 Ga0307409_100919549 3300031995 Bacteria 889
106 Ga0307416_100284386 3300032002 Bacteria 1633
107 Ga0307416_100843590 3300032002 Bacteria 1014
108 Ga0307415_100006433 3300032126 Bacteria 6334
109 Ga0307415_100046166 3300032126 Bacteria 2925
110 Ga0373925_0172557 3300037068 Bacteria 1708
111 Ga0395900_0198555 3300037418 Bacteria 2031
112 Ga0395900_0349469 3300037418 Bacteria 1452
113 Ga0395905_0036938 3300037471 Bacteria 4589
114 Ga0395901_0069234 3300038443 Bacteria 3675
115 Ga0395901_0136967 3300038443 Bacteria 2573
116 Ga0436365_1468263 3300039437 Bacteria 1075
117 Ga0451837_0374015 3300041494 Bacteria 1637
118 Ga0451853_0481686 3300041512 Bacteria 1083
119 Ga0439431_0001871 3300041997 Bacteria 4668
120 Ga0439457_067886 3300042014 Bacteria 811
121 Ga0439434_0001490 3300042435 Bacteria 6734
122 Ga0466972_0022624 3300044658 Bacteria 3128
123 Ga0466972_0050407 3300044658 Bacteria 2010
124 Ga0466972_0078703 3300044658 Bacteria 1570
125 Ga0466965_0006845 3300044683 Bacteria 5209
126 Ga0466965_0018809 3300044683 Bacteria 3315
127 Ga0466966_0163705 3300044684 Bacteria 1354
128 Ga0466963_0046602 3300044694 Bacteria 2859
129 Ga0466963_0069846 3300044694 Bacteria 2362
130 Ga0466964_0011597 3300044706 Bacteria 3332
131 Ga0466964_0029202 3300044706 Bacteria 2176
132 Ga0466964_0044459 3300044706 Bacteria 1804
133 Ga0466971_0054398 3300044719 Bacteria 1804
134 Ga0466970_0003075 3300044765 Bacteria 8102
135 Ga0466970_0056354 3300044765 Bacteria 2100
136 Ga0466970_0059166 3300044765 Bacteria 2052
137 Ga0466970_0059882 3300044765 Bacteria 2039
138 Ga0466970_0163907 3300044765 Bacteria 1230
139 Ga0466970_0260520 3300044765 Bacteria 973
140 Ga0466957_0022172 3300044842 Bacteria 3745
141 Ga0466960_0009223 3300044901 Bacteria 4062
142 Ga0466960_0032077 3300044901 Bacteria 2429
143 Ga0466960_0058421 3300044901 Bacteria 1884
144 Ga0466959_0262950 3300045049 Bacteria 1187
145 Ga0451576_0287250 3300045051 Bacteria 1720
146 Ga0466967_0016326 3300045976 Bacteria 5852
147 Ga0466967_0119719 3300045976 Bacteria 2430
148 Ga0495629_0244154 3300046459 Bacteria 1236
149 Ga0495651_0107331 3300046462 Bacteria 2069
150 Ga0495656_0221001 3300046615 Bacteria 947
151 Ga0495658_0036372 3300046683 Bacteria 2716
152 Ga0495593_0208236 3300047673 Bacteria 982
153 Ga0496100_0133094 3300048903 Bacteria 1754
154 Ga0496100_0215677 3300048903 Bacteria 1406
155 Ga0496100_0385604 3300048903 Bacteria 1065
156 Ga0496101_0135309 3300048904 Bacteria 1875
157 Ga0496102_0036952 3300048905 Bacteria 4403
158 Ga0496102_0088855 3300048905 Bacteria 2857
159 Ga0496102_0218602 3300048905 Bacteria 1796
160 Ga0496102_0224818 3300048905 Bacteria 1770
161 Ga0496104_0156859 3300048907 Bacteria 2184
162 Ga0496105_0003094 3300048908 Bacteria 12235
163 Ga0496105_0055301 3300048908 Bacteria 3277
164 Ga0496105_0094425 3300048908 Bacteria 2470
165 Ga0496107_0023827 3300048910 Bacteria 4326
166 Ga0496107_0323665 3300048910 Bacteria 1147
167 Ga0496107_0382869 3300048910 Bacteria 1046
168 Ga0496108_0044057 3300048911 Bacteria 3726
169 Ga0496108_0347498 3300048911 Bacteria 1294
170 Ga0496109_0015369 3300048912 Bacteria 6669
171 Ga0496109_0026838 3300048912 Bacteria 5137
172 Ga0496109_0122437 3300048912 Bacteria 2424
173 Ga0496109_0156827 3300048912 Bacteria 2132
174 Ga0496109_0210402 3300048912 Bacteria 1829
175 Ga0496110_0216318 3300048913 Bacteria 1742
176 Ga0496111_0012308 3300048914 Bacteria 5788
177 Ga0496111_0096828 3300048914 Bacteria 2166
178 Ga0496111_0150991 3300048914 Bacteria 1723
179 Ga0496111_0309433 3300048914 Bacteria 1171
180 Ga0496112_0334440 3300048915 Bacteria 1458
181 Ga0496113_0158301 3300048916 Bacteria 1790
182 Ga0496113_0186064 3300048916 Bacteria 1647
183 Ga0496114_0013178 3300048917 Bacteria 6627
184 Ga0496114_0016580 3300048917 Bacteria 5938
185 Ga0496114_0024857 3300048917 Bacteria 4890
186 Ga0496114_0140676 3300048917 Bacteria 2089
187 Ga0496115_0015612 3300048918 Bacteria 5765
188 Ga0496115_0106733 3300048918 Bacteria 2299
189 Ga0496124_0075575 3300048927 Bacteria 2783
190 Ga0501031_0010157 3300049568 Bacteria 6134
191 Ga0501031_0310782 3300049568 Bacteria 1021
192 Ga0501032_0113137 3300049569 Bacteria 1795
193 Ga0501034_0009415 3300049571 Bacteria 10227
194 Ga0501034_0082717 3300049571 Bacteria 3212
195 Ga0501034_0229881 3300049571 Bacteria 1804
196 Ga0501036_0052503 3300049572 Bacteria 3452
197 Ga0501036_0291927 3300049572 Bacteria 1364
198 Ga0501036_0295567 3300049572 Bacteria 1355
199 Ga0501037_0121246 3300049573 Bacteria 1880
200 Ga0501037_0249120 3300049573 Bacteria 1243
201 Ga0501038_0009977 3300049574 Bacteria 8696
202 Ga0501038_0032920 3300049574 Bacteria 4568
203 Ga0501039_0051007 3300049575 Bacteria 3202
204 Ga0501039_0198762 3300049575 Bacteria 1576
205 Ga0501040_0101648 3300049576 Bacteria 2006
206 Ga0501040_0229020 3300049576 Bacteria 1323
207 Ga0501041_0257258 3300049577 Bacteria 1098
208 Ga0501042_0006720 3300049578 Bacteria 7497
209 Ga0501042_0132483 3300049578 Bacteria 1797
210 Ga0501042_0234195 3300049578 Bacteria 1325
211 Ga0501043_0070997 3300049579 Bacteria 2735
212 Ga0501046_0002365 3300049580 Bacteria 17744
213 Ga0501046_0004417 3300049580 Bacteria 12762
214 Ga0501047_0010367 3300049581 Bacteria 8815
215 Ga0501048_0080179 3300049582 Bacteria 2303
216 Ga0501048_0216038 3300049582 Bacteria 1360
217 Ga0501048_0389651 3300049582 Bacteria 995
218 Ga0501067_0000532 3300049583 Bacteria 20747
219 Ga0501067_0016616 3300049583 Bacteria 4066
220 Ga0501068_0005844 3300049584 Bacteria 6749
221 Ga0501068_0036768 3300049584 Bacteria 2930
222 Ga0501070_0002362 3300049586 Bacteria 16548
223 Ga0501070_0003694 3300049586 Bacteria 13230
224 Ga0501070_0030459 3300049586 Bacteria 4522
225 Ga0501070_0068904 3300049586 Bacteria 2928
226 Ga0501070_0068919 3300049586 Bacteria 2928
227 Ga0501070_0098956 3300049586 Bacteria 2412
228 Ga0501070_0134166 3300049586 Bacteria 2044
229 Ga0501070_0545219 3300049586 Bacteria 929
230 Ga0501071_0002274 3300049587 Bacteria 11567
231 Ga0501072_0078227 3300049588 Bacteria 2618
232 Ga0501072_0161753 3300049588 Bacteria 1786
233 Ga0501072_0193129 3300049588 Bacteria 1623
234 Ga0501072_0284228 3300049588 Bacteria 1316
235 Ga0501073_0032041 3300049589 Bacteria 3749
236 Ga0501073_0057859 3300049589 Bacteria 2710
237 Ga0501074_0010660 3300049590 Bacteria 6672
238 Ga0501074_0041684 3300049590 Bacteria 3323
239 Ga0501074_0243749 3300049590 Bacteria 1278
240 Ga0501075_0421052 3300049591 Bacteria 1018
241 Ga0501077_0009491 3300049593 Bacteria 6048
242 Ga0501079_0093881 3300049741 Bacteria 2325
243 Ga0501080_0051350 3300049742 Bacteria 3837
244 Ga0501080_0166280 3300049742 Bacteria 2035
245 Ga0501083_0009174 3300049744 Bacteria 6989
246 Ga0501083_0116184 3300049744 Bacteria 1756
247 Ga0501035_0022527 3300049822 Bacteria 5785
248 Ga0501035_0374597 3300049822 Bacteria 1188
249 Ga0501044_0025843 3300049823 Bacteria 6224
250 Ga0501044_0452356 3300049823 Bacteria 1190
251 Ga0501045_0355539 3300049824 Bacteria 1090
252 nmdc:mga03n38_106395_c1 3300050490 Bacteria 1360
253 nmdc:mga03n38_245597_c1 3300050490 Bacteria 944
254 nmdc:mga00v17_50456_c1 3300050491 Bacteria 2528
255 nmdc:mga0yw44_121779_c1 3300050492 Bacteria 1681
256 nmdc:mga0yw44_173778_c1 3300050492 Bacteria 1416
257 nmdc:mga0yw44_18573_c1 3300050492 Bacteria 3813
258 nmdc:mga0yw44_198374_c1 3300050492 Bacteria 1325
259 nmdc:mga0yw44_24265_c1 3300050492 Bacteria 3429
260 nmdc:mga0yw44_47370_c1 3300050492 Bacteria 2587
261 nmdc:mga0yw44_7351_c1 3300050492 Bacteria 5411
262 nmdc:mga0yw44_96726_c1 3300050492 Bacteria 1875
263 nmdc:mga06z11_195964_c1 3300050494 Bacteria 1171
264 nmdc:mga06z11_32049_c1 3300050494 Bacteria 2560
265 nmdc:mga04h51_8743_c1 3300050495 Bacteria 2718
266 nmdc:mga07m45_211465_c1 3300050496 Bacteria 1128
267 nmdc:mga07m45_212786_c1 3300050496 Bacteria 1124
268 nmdc:mga07m45_9929_c1 3300050496 Bacteria 4953
269 nmdc:mga0sz30_2393_c1 3300050516 Bacteria 6693
270 Ga0500556_0000760 3300053104 Bacteria 19167
271 Ga0500573_0002919 3300053140 Bacteria 8714
272 Ga0501084_0009881 3300054114 Bacteria 7886
273 Ga0501084_0011540 3300054114 Bacteria 7315
274 Ga0501082_0587721 3300060353 Bacteria 974
275 2643828431 2643221561 Bacteria 4984412
276 2643892965 2643221576 Bacteria 5214352
277 2643962726 2643221590 Bacteria 5214697
278 2644034264 2643221604 Bacteria 5014917
279 2644098655 2643221617 Bacteria 5139111
280 2644116016 2643221620 Bacteria 5134593
281 2644230594 2643221641 Bacteria 4490190
282 2644535245 2643221696 Bacteria 5431823
283 2738871492 2738541305 Bacteria 4910150
284 2740167773 2739367898 Bacteria 4367674
285 2774397108 2773857762 Bacteria 5971770
286 2809198754 2808606439 Bacteria 5952208
287 2812333571 2811994874 Bacteria 5367947
288 2812352676 2811994878 Bacteria 5992952
289 2855389846 2855386786 Bacteria 4752232
290 2857482820 2857481737 Bacteria 4761446
291 2891969785 2891968417 Bacteria 5821697
292 2984576717 2984576629 Bacteria 4248407
293 2990258481 2990256926 Bacteria 4252839
294 Ga0496114_0025124
295 JGI24740J21852_10055128
296 JGI24735J21928_10005169
297 rootH2_10253182
298 Ga0006562J51391_1079336
299 Ga0070658_10051919
300 Ga0070676_10099632
301 Ga0070683_100000705
302 Ga0070683_100037409
303 Ga0068869_100144172
304 Ga0070682_100011162
305 Ga0070659_100316925
306 Ga0070659_100319819
307 Ga0070701_10239683
308 Ga0070708_100467455
309 Ga0070663_100101977
310 Ga0070707_100087087
311 Ga0070698_100005194
312 Ga0070679_100011811
313 Ga0070684_100000618
314 Ga0068853_100134810
315 Ga0070672_100436914
316 Ga0070665_100009441
317 Ga0070665_100138733
318 Ga0068855_100857564
319 Ga0070664_100063180
320 Ga0070664_100070620
321 Ga0068857_100003249
322 Ga0068856_100048797
323 Ga0068856_100450593
324 Ga0068861_100117924
325 Ga0068870_10408514
326 Ga0068858_100047823
327 Ga0068860_100006533
328 Ga0068862_100137012
329 Ga0075365_10008659
330 Ga0075365_10023741
331 Ga0075365_10049950
332 Ga0075365_10050278
333 Ga0075363_100003383
334 Ga0075363_100048203
335 Ga0075363_100071436
336 Ga0075363_100083441
337 Ga0075364_10089306
338 Ga0075364_10153648
339 Ga0075367_10011245
340 Ga0075367_10014149
341 Ga0075370_10007515
342 Ga0075370_10113828
343 Ga0068871_100248795
344 Ga0068865_100021340
345 Ga0068865_100279448
346 Ga0105243_10268118
347 Ga0105248_11121634
348 Ga0105249_10021209
349 Ga0105239_10023179
350 Ga0105239_10156529
351 Ga0105246_10001084
352 Ga0105246_10199980
353 Ga0157369_11010348
354 Ga0163162_10007664
355 Ga0157372_10002275
356 Ga0157372_11290743
357 Ga0157375_10009438
358 Ga0157379_10023721
359 Ga0157376_10259342
360 Ga0157376_10392255
361 Ga0163161_10337027
362 Ga0207642_10103601
363 Ga0207647_10011612
364 Ga0207647_10047544
365 Ga0207643_10373825
366 Ga0207705_10044495
367 Ga0207660_10453313
368 Ga0207652_10014910
369 Ga0207694_10142676
370 Ga0207659_10489987
371 Ga0207690_10067773
372 Ga0207706_10279914
373 Ga0207709_10204317
374 Ga0207704_10342285
375 Ga0207691_10321617
376 Ga0207689_10131931
377 Ga0207661_10003929
378 Ga0207679_10069563
379 Ga0207712_10172390
380 Ga0207703_10101332
381 Ga0207639_10088515
382 Ga0207678_10281834
383 Ga0207676_10014046
384 Ga0207674_10001564
385 Ga0207675_100049145
386 Ga0207683_10079666
387 Ga0268266_10022246
388 Ga0268264_10000695
389 Ga0307408_100329989
390 Ga0307405_10032950
391 Ga0307405_10145527
392 Ga0307413_10099692
393 Ga0307406_10337305
394 Ga0307407_10037364
395 Ga0307412_10018364
396 Ga0307412_10158151
397 Ga0307409_100001390
398 Ga0307409_100919549
399 Ga0307416_100284386
400 Ga0307416_100843590
401 Ga0307415_100006433
402 Ga0307415_100046166
403 Ga0373925_0172557
404 Ga0395900_0198555
405 Ga0395900_0349469
406 Ga0395905_0036938
407 Ga0395901_0069234
408 Ga0395901_0136967
409 Ga0436365_1468263
410 Ga0451837_0374015
411 Ga0451853_0481686
412 Ga0439431_0001871
413 Ga0439457_067886
414 Ga0439434_0001490
415 Ga0466972_0022624
416 Ga0466972_0050407
417 Ga0466972_0078703
418 Ga0466965_0006845
419 Ga0466965_0018809
420 Ga0466966_0163705
421 Ga0466963_0046602
422 Ga0466963_0069846
423 Ga0466964_0011597
424 Ga0466964_0029202
425 Ga0466964_0044459
426 Ga0466971_0054398
427 Ga0466970_0003075
428 Ga0466970_0056354
429 Ga0466970_0059166
430 Ga0466970_0059882
431 Ga0466970_0163907
432 Ga0466970_0260520
433 Ga0466957_0022172
434 Ga0466960_0009223
435 Ga0466960_0032077
436 Ga0466960_0058421
437 Ga0466959_0262950
438 Ga0451576_0287250
439 Ga0466967_0016326
440 Ga0466967_0119719
441 Ga0495629_0244154
442 Ga0495651_0107331
443 Ga0495656_0221001
444 Ga0495658_0036372
445 Ga0495593_0208236
446 Ga0496100_0133094
447 Ga0496100_0215677
448 Ga0496100_0385604
449 Ga0496101_0135309
450 Ga0496102_0036952
451 Ga0496102_0088855
452 Ga0496102_0218602
453 Ga0496102_0224818
454 Ga0496104_0156859
455 Ga0496105_0003094
456 Ga0496105_0055301
457 Ga0496105_0094425
458 Ga0496107_0023827
459 Ga0496107_0323665
460 Ga0496107_0382869
461 Ga0496108_0044057
462 Ga0496108_0347498
463 Ga0496109_0015369
464 Ga0496109_0026838
465 Ga0496109_0122437
466 Ga0496109_0156827
467 Ga0496109_0210402
468 Ga0496110_0216318
469 Ga0496111_0012308
470 Ga0496111_0096828
471 Ga0496111_0150991
472 Ga0496111_0309433
473 Ga0496112_0334440
474 Ga0496113_0158301
475 Ga0496113_0186064
476 Ga0496114_0013178
477 Ga0496114_0016580
478 Ga0496114_0024857
479 Ga0496114_0140676
480 Ga0496115_0015612
481 Ga0496115_0106733
482 Ga0496124_0075575
483 Ga0501031_0010157
484 Ga0501031_0310782
485 Ga0501032_0113137
486 Ga0501034_0009415
487 Ga0501034_0082717
488 Ga0501034_0229881
489 Ga0501036_0052503
490 Ga0501036_0291927
491 Ga0501036_0295567
492 Ga0501037_0121246
493 Ga0501037_0249120
494 Ga0501038_0009977
495 Ga0501038_0032920
496 Ga0501039_0051007
497 Ga0501039_0198762
498 Ga0501040_0101648
499 Ga0501040_0229020
500 Ga0501041_0257258
501 Ga0501042_0006720
502 Ga0501042_0132483
503 Ga0501042_0234195
504 Ga0501043_0070997
505 Ga0501046_0002365
506 Ga0501046_0004417
507 Ga0501047_0010367
508 Ga0501048_0080179
509 Ga0501048_0216038
510 Ga0501048_0389651
511 Ga0501067_0000532
512 Ga0501067_0016616
513 Ga0501068_0005844
514 Ga0501068_0036768
515 Ga0501070_0002362
516 Ga0501070_0003694
517 Ga0501070_0030459
518 Ga0501070_0068904
519 Ga0501070_0068919
520 Ga0501070_0098956
521 Ga0501070_0134166
522 Ga0501070_0545219
523 Ga0501071_0002274
524 Ga0501072_0078227
525 Ga0501072_0161753
526 Ga0501072_0193129
527 Ga0501072_0284228
528 Ga0501073_0032041
529 Ga0501073_0057859
530 Ga0501074_0010660
531 Ga0501074_0041684
532 Ga0501074_0243749
533 Ga0501075_0421052
534 Ga0501077_0009491
535 Ga0501079_0093881
536 Ga0501080_0051350
537 Ga0501080_0166280
538 Ga0501083_0009174
539 Ga0501083_0116184
540 Ga0501035_0022527
541 Ga0501035_0374597
542 Ga0501044_0025843
543 Ga0501044_0452356
544 Ga0501045_0355539
545 nmdc:mga03n38_106395_c1
546 nmdc:mga03n38_245597_c1
547 nmdc:mga00v17_50456_c1
548 nmdc:mga0yw44_121779_c1
549 nmdc:mga0yw44_173778_c1
550 nmdc:mga0yw44_18573_c1
551 nmdc:mga0yw44_198374_c1
552 nmdc:mga0yw44_24265_c1
553 nmdc:mga0yw44_47370_c1
554 nmdc:mga0yw44_7351_c1
555 nmdc:mga0yw44_96726_c1
556 nmdc:mga06z11_195964_c1
557 nmdc:mga06z11_32049_c1
558 nmdc:mga04h51_8743_c1
559 nmdc:mga07m45_211465_c1
560 nmdc:mga07m45_212786_c1
561 nmdc:mga07m45_9929_c1
562 nmdc:mga0sz30_2393_c1
563 Ga0500556_0000760
564 Ga0500573_0002919
565 Ga0501084_0009881
566 Ga0501084_0011540
567 Ga0501082_0587721
568 2643828431
569 2643892965
570 2643962726
571 2644034264
572 2644098655
573 2644116016
574 2644230594
575 2644535245
576 2738871492
577 2740167773
578 2774397108
579 2809198754
580 2812333571
581 2812352676
582 2855389846
583 2857482820
584 2891969785
585 2984576717
586 2990258481

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04954

SIP

Siderophore-interacting protein

107

218

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
2gpj-assembly1.cif.gz_A crystal structure of a siderophore-interacting protein (sputcn32_0076) from shewanella putrefaciens cn-32 at 2.20 a resolution 0.8512 24 237
6tek-assembly1.cif.gz_B structure of siderophore interaction domain of irtab 0.8302 23 235
7xlz-assembly2.cif.gz_B structure of siderophore-interacting protein from vibrio anguillarum 0.8296 23 237
4yhb-assembly1.cif.gz_A crystal structure of a siderophore utilization protein from t. fusca 0.8282 23 235
6l2u-assembly1.cif.gz_B soluble methane monooxygenase reductase fad-binding domain from methylosinus sporium. 0.8241 24 116
ID Description Score Start End Superfamily
af_P9WL31_2_128_2.40.30.10 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.8669 24 116 2.40.30.10
4wqmA02 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.8558 23 117 2.40.30.10
af_P9WQJ9_14_115_2.40.30.10 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.8548 23 111 2.40.30.10
1krhB02 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.8471 23 113 2.40.30.10
af_Q9URY5_176_283_2.40.30.10 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.8465 24 117 2.40.30.10
ID Description Score Start End GO Terms
AF-A0A3L8P2K3-F1-model_v4 Siderophore-interacting protein 0.934 18 241 GO:0016491
AF-A0A7L4YM92-F1-model_v4 SIP domain-containing protein 0.9249 22 232 GO:0016491
AF-A0A3L8P2K3-F1-model_v4 Siderophore-interacting protein 0.9219 18 241 GO:0016491
AF-A0A4Q4CP00-F1-model_v4 Siderophore-interacting protein 0.9215 20 241 GO:0016491
AF-A0A3B0RM18-F1-model_v4 FAD-binding FR-type domain-containing protein 0.9118 23 157 GO:0016491

Map