F391126

General Info

Members Datasets Scaffolds Average Seq Length
292 215 584 327

Family's Representative Sequence

Representative Sequence 3300046530|Ga0495654_0001260|Ga0495654_0001260_8473_9567
Length 364
Sequence MACTAPFFRKALKQLICARLRQLLIRQQIKPLKHWRLMLKISENTSTSRTMRSVVLGGRGFIGTHLIEALLDQGHTVRCFDRPNVVALGDSHTTDTRFELYEGDFTSEADISEALRDCDVCYHLVSTTLPKSSNADPVFDIESNLVGTIRLLNLAVEAGIKKIVFVSSGGTVYGDPVQVPISETHPTDPACSYGIAKLAIEKYLALFHRLHGLDYTVLRLANPYGEGQRTHSSQGAVAVFLGKVLRGEPIEIWGDGSVVRDYIHVADVVQALLASIERSTDEHVFNIGSGHGHSLNELLDAIEKITGRVADRQYLAARGFDVPVSVLCIERAKRSLGWAPAVSFEQGLKQFVAWLEESPSSRIA

Samples

Sample ID Description Type Environment
1 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
2 2124908027 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v1 Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
7 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
8 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
28 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
29 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
31 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
35 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
36 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
37 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
38 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
39 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
40 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
41 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
42 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
43 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
44 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
45 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
46 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
47 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
48 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
49 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
50 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
51 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
75 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
76 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
77 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
80 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
81 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
82 3300030735 Rhizosphere soil microbial communities in a healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 4 Metagenome Rhizosphere
83 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
84 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
85 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
86 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
87 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
88 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
89 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
90 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
91 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
92 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
93 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
94 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
95 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
96 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
97 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
98 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
99 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
100 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
101 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
102 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
103 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
104 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
105 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
106 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
107 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
108 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
109 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
110 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
111 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
112 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
113 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
114 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
115 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
116 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
117 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
118 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
119 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
120 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
121 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
122 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
123 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
124 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
125 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
126 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
127 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
128 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
129 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
130 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
131 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
132 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
133 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
134 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
135 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
136 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
137 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
138 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
139 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
140 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
141 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
142 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
143 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
144 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
145 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
146 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
147 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
148 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
149 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
150 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
151 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
152 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
153 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
154 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
155 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
156 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
157 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
158 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
159 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
160 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
161 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
162 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
163 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
164 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
165 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
166 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
167 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
168 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
169 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
170 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
171 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
172 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
173 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
174 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
175 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
176 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
177 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
178 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
179 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
180 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
181 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
182 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
183 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
184 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
185 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
186 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
187 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
188 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
189 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
190 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
191 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
192 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
193 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
194 2510917028 Rhizobium sp. CF122 Isolate Rhizosphere
195 2599185292 Achromobacter sp. NFACC18-2 Isolate Rhizoplane
196 2623620443 Pseudomonas sp. DR 5-09 Isolate Unclassified
197 2623620446 Pseudomonas sp. GR 6-02 Isolate Unclassified
198 2667528176 Pseudomonas sp. NFACC11-2 Isolate Rhizoplane
199 2738541296 Paraburkholderia sp. GV073 Isolate Unclassified
200 2738541298 Paraburkholderia sp. GV068 Isolate Unclassified
201 2738541306 Paraburkholderia sp. GV052 Isolate Unclassified
202 2738543002 Paraburkholderia sp. GV072 Isolate Unclassified
203 2738543008 Paraburkholderia sp. GV060 Isolate Unclassified
204 2767802442 Phyllobacterium brassicacearum 29-15 Isolate Rhizoplane
205 2775506902 Phyllobacterium zundukense Tri-48 Isolate Unclassified
206 2775506904 Phyllobacterium zundukense Tri-38 Isolate Unclassified
207 2818991448 Rhizobium miluonense 1234 Isolate Unclassified
208 2860339153 Pseudomonas sp. JAI111 Isolate Rhizosphere
209 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
210 2919527303 Paraburkholderia strydomiana 3827 Isolate Unclassified
211 2919697872 Pseudomonas frederiksbergensis 4169 Isolate Unclassified
212 2931396565 Pseudomonas sp. DR48 Isolate Rhizosphere
213 2945972063 Variovorax paradoxus W2I8 Isolate Rhizosphere
214 2953994433 Luteibacter sp. W1I16 Isolate Rhizosphere
215 8019775933 Pseudomonas sp. PvR083 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.47
Metatranscriptomes 0
Isolates 7.53

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.08
Nodule 1.37
Rhizoplane 3.08
Rhizosphere 83.9
Stem 0
Stem Tuber 0
Unclassified 4.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495654_0001260 3300046530 Bacteria 17847
2 MRS2a_Contig_6431 2124908027 Bacteria 3711
3 JGI24740J21852_10000291 3300001979 Bacteria 21452
4 JGI24735J21928_10003549 3300002067 Bacteria 5309
5 rootH1_10313850 3300003323 Bacteria 1357
6 Ga0055526_1000186 3300003771 Bacteria 54240
7 Ga0055530_10024286 3300003791 Bacteria 1723
8 Ga0065714_10002270 3300005288 Bacteria 29515
9 Ga0065714_10091014 3300005288 Bacteria 1924
10 Ga0070666_10023678 3300005335 Bacteria 3998
11 Ga0070680_100259228 3300005336 Bacteria 1470
12 Ga0070660_100097744 3300005339 Bacteria 2323
13 Ga0070674_100027673 3300005356 Bacteria 3717
14 Ga0070659_100202450 3300005366 Bacteria 1635
15 Ga0070708_100316227 3300005445 Unclassified 1471
16 Ga0070678_100107374 3300005456 Bacteria 2177
17 Ga0070678_100357563 3300005456 Bacteria 1257
18 Ga0068867_100032634 3300005459 Bacteria 3767
19 Ga0070707_100003764 3300005468 Bacteria 14297
20 Ga0068853_100019236 3300005539 Bacteria 5659
21 Ga0068853_100057921 3300005539 Bacteria 3344
22 Ga0070665_100015139 3300005548 Bacteria 7742
23 Ga0068855_100005342 3300005563 Bacteria 15677
24 Ga0068855_100200014 3300005563 Unclassified 2250
25 Ga0068857_100019379 3300005577 Bacteria 5973
26 Ga0068856_100013087 3300005614 Bacteria 8036
27 Ga0068856_100085857 3300005614 Bacteria 3127
28 Ga0070702_100135186 3300005615 Bacteria 1563
29 Ga0068859_100014175 3300005617 Bacteria 7994
30 Ga0068859_100493247 3300005617 Bacteria 1320
31 Ga0068870_10176649 3300005840 Bacteria 1278
32 Ga0068863_100050111 3300005841 Bacteria 3960
33 Ga0068858_100018470 3300005842 Bacteria 6528
34 Ga0068858_100231421 3300005842 Bacteria 1752
35 Ga0068862_100006067 3300005844 Bacteria 10060
36 Ga0097620_100014175 3300006931 Bacteria 7994
37 Ga0097620_100493196 3300006931 Bacteria 1320
38 Ga0099824_1028299 3300006942 Bacteria 2565
39 Ga0105250_10009634 3300009092 Bacteria 4060
40 Ga0105240_10026031 3300009093 Bacteria 7683
41 Ga0105240_10035354 3300009093 Bacteria 6440
42 Ga0114129_10443730 3300009147 Bacteria 1703
43 Ga0105241_10004255 3300009174 Bacteria 10581
44 Ga0105242_10427765 3300009176 Bacteria 1242
45 Ga0105248_10003226 3300009177 Bacteria 18084
46 Ga0105237_10016503 3300009545 Bacteria 7672
47 Ga0105238_10001122 3300009551 Bacteria 27062
48 Ga0105238_10029257 3300009551 Bacteria 5613
49 Ga0105239_10017541 3300010375 Bacteria 7918
50 Ga0105239_10038792 3300010375 Bacteria 5219
51 Ga0157373_10000380 3300013100 Bacteria 35597
52 Ga0157373_10000529 3300013100 Bacteria 29839
53 Ga0157371_10001343 3300013102 Bacteria 25909
54 Ga0157371_10002287 3300013102 Bacteria 18466
55 Ga0157371_10002921 3300013102 Bacteria 15964
56 Ga0157370_10003020 3300013104 Bacteria 19973
57 Ga0157370_10098289 3300013104 Bacteria 2745
58 Ga0171462_1010 3300013250 Bacteria 310590
59 Ga0157378_10017426 3300013297 Bacteria 6304
60 Ga0163162_10012747 3300013306 Bacteria 8211
61 Ga0163162_10093401 3300013306 Bacteria 3093
62 Ga0157375_10030928 3300013308 Bacteria 5053
63 Ga0157375_10119674 3300013308 Bacteria 2741
64 Ga0182008_10014241 3300014497 Bacteria 4167
65 Ga0182008_10132850 3300014497 Bacteria 1242
66 Ga0182006_1001142 3300015261 Bacteria 16891
67 Ga0182005_1000064 3300015265 Bacteria 95976
68 Ga0163161_10001482 3300017792 Bacteria 17332
69 Ga0209676_1005064 3300025292 Bacteria 7044
70 Ga0209564_1000023 3300025295 Bacteria 555102
71 Ga0209050_1000904 3300025298 Bacteria 39210
72 Ga0209051_1014660 3300025303 Bacteria 3646
73 Ga0207696_1045638 3300025711 Bacteria 1266
74 Ga0207655_1011830 3300025728 Bacteria 5156
75 Ga0207655_1014617 3300025728 Bacteria 4422
76 Ga0207647_10079880 3300025904 Bacteria 1962
77 Ga0207654_10000136 3300025911 Bacteria 47311
78 Ga0207695_10002311 3300025913 Bacteria 28436
79 Ga0207695_10039974 3300025913 Bacteria 5036
80 Ga0207695_10429173 3300025913 Unclassified 1205
81 Ga0207671_10009100 3300025914 Bacteria 8343
82 Ga0207671_10283092 3300025914 Bacteria 1308
83 Ga0207657_10165304 3300025919 Bacteria 1795
84 Ga0207646_10019948 3300025922 Bacteria 6219
85 Ga0207694_10000135 3300025924 Bacteria 75715
86 Ga0207690_10154991 3300025932 Bacteria 1702
87 Ga0207669_10078283 3300025937 Bacteria 2106
88 Ga0207711_10002081 3300025941 Bacteria 18081
89 Ga0207667_10018774 3300025949 Bacteria 7743
90 Ga0207667_10277936 3300025949 Bacteria 1711
91 Ga0207640_10443191 3300025981 Bacteria 1068
92 Ga0207639_10015524 3300026041 Bacteria 5376
93 Ga0207702_10000026 3300026078 Bacteria 186067
94 Ga0207702_10049897 3300026078 Bacteria 3532
95 Ga0207674_10034098 3300026116 Bacteria 5323
96 Ga0207683_10054558 3300026121 Unclassified 3504
97 Ga0207698_10009063 3300026142 Bacteria 6321
98 Ga0209389_1000089 3300027296 Bacteria 83505
99 Ga0209589_1000148 3300027357 Bacteria 77222
100 Ga0209489_100512 3300027361 Bacteria 72878
101 Ga0268266_10001076 3300028379 Bacteria 34200
102 Ga0268265_10002115 3300028380 Bacteria 15403
103 Ga0265318_10013218 3300028577 Bacteria 3496
104 Ga0265338_10045254 3300028800 Bacteria 4049
105 Ga0265324_10001985 3300029957 Bacteria 10937
106 Ga0316178_1080346 3300030735 Bacteria 35595
107 Ga0316181_1105892 3300030744 Bacteria 14290
108 Ga0265330_10004615 3300031235 Bacteria 6965
109 Ga0265325_10003211 3300031241 Bacteria 10754
110 Ga0265325_10022889 3300031241 Bacteria 3419
111 Ga0265340_10012112 3300031247 Bacteria 4560
112 Ga0265339_10001890 3300031249 Bacteria 15351
113 Ga0265331_10079326 3300031250 Unclassified 1528
114 Ga0265327_10000645 3300031251 Bacteria 56357
115 Ga0265327_10001763 3300031251 Bacteria 25592
116 Ga0265327_10012398 3300031251 Bacteria 5757
117 Ga0265316_10037398 3300031344 Bacteria 3917
118 Ga0265313_10001710 3300031595 Bacteria 20207
119 Ga0265314_10006547 3300031711 Bacteria 10275
120 Ga0265314_10054967 3300031711 Bacteria 2751
121 Ga0265314_10082906 3300031711 Bacteria 2109
122 Ga0265342_10011646 3300031712 Bacteria 6001
123 Ga0373953_0100821 3300035117 Bacteria 1215
124 Ga0373955_0052455 3300035172 Bacteria 2225
125 Ga0373935_0048115 3300035692 Bacteria 2699
126 Ga0373935_0059314 3300035692 Unclassified 2446
127 Ga0373927_0179150 3300035695 Unclassified 1390
128 Ga0373947_0016665 3300035725 Bacteria 4222
129 Ga0373937_0002582 3300036401 Bacteria 15066
130 Ga0373937_0034202 3300036401 Bacteria 4623
131 Ga0373937_0146413 3300036401 Unclassified 2211
132 Ga0373925_0013184 3300037068 Bacteria 5983
133 Ga0373925_0034920 3300037068 Bacteria 3708
134 Ga0373925_0156757 3300037068 Bacteria 1791
135 Ga0400489_33879 3300039093 Bacteria 2026
136 Ga0436363_0309102 3300039450 Bacteria 1887
137 Ga0439438_000273 3300041405 Bacteria 23210
138 Ga0439447_015827 3300041407 Bacteria 2083
139 Ga0451849_1084675 3300041505 Bacteria 5966
140 Ga0439432_000110 3300042006 Bacteria 26479
141 Ga0439432_000190 3300042006 Bacteria 21984
142 Ga0439452_005941 3300042010 Bacteria 3869
143 Ga0451577_0000002 3300042876 Bacteria 1731375
144 Ga0451577_0308552 3300042876 Unclassified 1434
145 Ga0451577_0411865 3300042876 Unclassified 1227
146 Ga0453683_0000002 3300044673 Bacteria 1244396
147 Ga0453683_0000013 3300044673 Bacteria 371932
148 Ga0453683_0000742 3300044673 Bacteria 33166
149 Ga0453683_0105136 3300044673 Unclassified 1773
150 Ga0453684_0000002 3300044712 Bacteria 1731375
151 Ga0453684_0000040 3300044712 Bacteria 690210
152 Ga0453684_0022802 3300044712 Bacteria 9271
153 Ga0451576_0000037 3300045051 Bacteria 372173
154 Ga0451576_0001954 3300045051 Bacteria 32866
155 Ga0495617_025709 3300046452 Bacteria 1984
156 Ga0495627_000169 3300046453 Bacteria 74332
157 Ga0495591_000593 3300046458 Bacteria 27415
158 Ga0495591_011464 3300046458 Bacteria 3357
159 Ga0495629_0007482 3300046459 Bacteria 8050
160 Ga0495629_0083324 3300046459 Bacteria 2232
161 Ga0495638_0005865 3300046460 Bacteria 9031
162 Ga0495638_0006677 3300046460 Bacteria 8365
163 Ga0495641_0040739 3300046461 Bacteria 2159
164 Ga0495653_0039771 3300046463 Bacteria 3681
165 Ga0495653_0043800 3300046463 Bacteria 3476
166 Ga0495653_0066436 3300046463 Bacteria 2713
167 Ga0495650_0001040 3300046471 Bacteria 31076
168 Ga0495580_0101656 3300046472 Unclassified 1999
169 Ga0495582_0000196 3300046473 Bacteria 33588
170 Ga0495605_0000753 3300046474 Bacteria 23741
171 Ga0495605_0013803 3300046474 Bacteria 4440
172 Ga0495639_0000020 3300046475 Bacteria 73983
173 Ga0495639_0003060 3300046475 Bacteria 7279
174 Ga0495584_0034485 3300046491 Bacteria 2560
175 Ga0495585_0001241 3300046492 Bacteria 20587
176 Ga0495585_0001746 3300046492 Bacteria 16559
177 Ga0495594_0003510 3300046499 Bacteria 8078
178 Ga0495594_0173608 3300046499 Bacteria 1226
179 Ga0495607_0029728 3300046501 Bacteria 3361
180 Ga0495607_0040823 3300046501 Bacteria 2759
181 Ga0495583_0002002 3300046506 Bacteria 18649
182 Ga0495606_0001684 3300046507 Bacteria 28532
183 Ga0495608_0015181 3300046511 Bacteria 5344
184 Ga0495610_0106095 3300046512 Bacteria 1251
185 Ga0495616_0004669 3300046513 Bacteria 8594
186 Ga0495630_0090537 3300046517 Bacteria 2311
187 Ga0495630_0145177 3300046517 Bacteria 1804
188 Ga0495631_0001718 3300046518 Bacteria 13005
189 Ga0495632_0000481 3300046519 Bacteria 37903
190 Ga0495632_0000744 3300046519 Bacteria 29345
191 Ga0495643_0015630 3300046522 Bacteria 4479
192 Ga0495643_0022625 3300046522 Bacteria 3584
193 Ga0495644_0000498 3300046523 Bacteria 16771
194 Ga0495666_0009365 3300046526 Bacteria 4900
195 Ga0495666_0019136 3300046526 Bacteria 3401
196 Ga0495666_0021687 3300046526 Bacteria 3179
197 Ga0495642_0000173 3300046528 Bacteria 37882
198 Ga0495654_0014352 3300046530 Bacteria 4215
199 Ga0495587_0000318 3300046536 Bacteria 34260
200 Ga0495587_0000727 3300046536 Bacteria 22034
201 Ga0495587_0028740 3300046536 Bacteria 3379
202 Ga0495609_0000661 3300046538 Bacteria 26766
203 Ga0495597_0058494 3300046542 Bacteria 1684
204 Ga0495645_0071111 3300046543 Bacteria 2510
205 Ga0495667_0000797 3300046559 Bacteria 20273
206 Ga0495668_0027942 3300046616 Bacteria 3194
207 Ga0495634_0221269 3300046642 Bacteria 1168
208 Ga0495611_0011148 3300046648 Bacteria 3809
209 Ga0495625_0016385 3300046660 Bacteria 5835
210 Ga0495635_0027540 3300046663 Bacteria 3952
211 Ga0495635_0087159 3300046663 Bacteria 2136
212 Ga0495659_0004629 3300046664 Bacteria 4329
213 Ga0495659_0019741 3300046664 Bacteria 2256
214 Ga0495661_0041263 3300046665 Bacteria 2856
215 Ga0495657_0008406 3300046675 Bacteria 7899
216 Ga0495623_0039153 3300046679 Bacteria 3030
217 Ga0495646_0000141 3300046680 Bacteria 36806
218 Ga0495646_0009457 3300046680 Bacteria 6185
219 Ga0495647_0063488 3300046681 Bacteria 1463
220 Ga0495658_0000958 3300046683 Bacteria 15355
221 Ga0495669_0000808 3300046684 Bacteria 13340
222 Ga0495613_0001873 3300046689 Bacteria 15975
223 Ga0495613_0098808 3300046689 Bacteria 2109
224 Ga0495671_0005186 3300046692 Bacteria 7666
225 Ga0495649_0000957 3300046694 Bacteria 22804
226 Ga0495589_0001569 3300046794 Bacteria 13144
227 Ga0495600_0004005 3300046809 Bacteria 8755
228 Ga0495600_0010602 3300046809 Bacteria 5724
229 Ga0495660_0003249 3300046810 Bacteria 10101
230 Ga0495581_0002410 3300047315 Bacteria 10564
231 Ga0495581_0018308 3300047315 Bacteria 4069
232 Ga0495604_0020783 3300047317 Bacteria 5241
233 Ga0495672_0001866 3300047320 Bacteria 20066
234 Ga0495672_0001998 3300047320 Bacteria 19270
235 Ga0495680_0000664 3300047322 Bacteria 38534
236 Ga0495680_0002689 3300047322 Bacteria 17947
237 Ga0495683_0003032 3300047323 Bacteria 9880
238 Ga0495687_001469 3300047443 Bacteria 21608
239 Ga0495687_005049 3300047443 Bacteria 8593
240 Ga0495675_0000630 3300047444 Bacteria 22434
241 Ga0495675_0091623 3300047444 Bacteria 1908
242 Ga0495677_0000289 3300047445 Bacteria 21903
243 Ga0495679_005232 3300047446 Bacteria 5793
244 Ga0495673_0002275 3300047469 Bacteria 13764
245 Ga0495684_0078000 3300047471 Unclassified 2514
246 Ga0495686_0041788 3300047472 Bacteria 2918
247 Ga0495593_0000168 3300047673 Bacteria 33647
248 Ga0495593_0007018 3300047673 Bacteria 6604
249 Ga0496100_0003506 3300048903 Bacteria 8190
250 Ga0496101_0005244 3300048904 Bacteria 8249
251 Ga0496102_0000519 3300048905 Bacteria 42011
252 Ga0496103_0001796 3300048906 Bacteria 14004
253 Ga0496106_0207754 3300048909 Bacteria 1559
254 Ga0496107_0223774 3300048910 Bacteria 1400
255 Ga0496116_0000427 3300048919 Bacteria 59167
256 Ga0496117_0004742 3300048920 Bacteria 14764
257 Ga0496117_0039965 3300048920 Bacteria 3456
258 Ga0496117_0075048 3300048920 Bacteria 2248
259 Ga0496118_0001202 3300048921 Bacteria 39851
260 Ga0496118_0166902 3300048921 Bacteria 1351
261 Ga0496121_0002139 3300048924 Bacteria 31028
262 Ga0496123_0074502 3300048926 Bacteria 2101
263 Ga0496126_0019237 3300048929 Bacteria 6730
264 Ga0495682_0000341 3300049460 Bacteria 34546
265 Ga0495682_0000536 3300049460 Bacteria 26226
266 Ga0495682_0108352 3300049460 Bacteria 995
267 Ga0501043_0144193 3300049579 Bacteria 1865
268 nmdc:mga0sz30_12221_c1 3300050516 Bacteria 2119
269 Ga0500618_000735 3300053125 Bacteria 18723
270 Ga0500616_0012007 3300053153 Bacteria 5087
271 2511181803 2510917028 Bacteria 6185411
272 2599904358 2599185292 Bacteria 6290804
273 2624481955 2623620443 Bacteria 6427864
274 2624490954 2623620446 Bacteria 6500345
275 2671125967 2667528176 Bacteria 6724917
276 2738819942 2738541296 Bacteria 7285013
277 2738832422 2738541298 Bacteria 7286732
278 2738873949 2738541306 Bacteria 7284992
279 2739185579 2738543002 Bacteria 7284546
280 2739220547 2738543008 Bacteria 7282815
281 2770199683 2767802442 Bacteria 5747986
282 2776268366 2775506902 Bacteria 6208009
283 2776283193 2775506904 Bacteria 5954060
284 2819613358 2818991448 Bacteria 6772224
285 2860340867 2860339153 Bacteria 6846989
286 2917703677 2917699015 Bacteria 7043791
287 2919530066 2919527303 Bacteria 7718827
288 2919701946 2919697872 Bacteria 6553725
289 2931396610 2931396565 Bacteria 7251677
290 2945975227 2945972063 Bacteria 6086495
291 2953995643 2953994433 Bacteria 4303959
292 8019779319 8019775933 Bacteria 6858656
293 Ga0495654_0001260
294 MRS2a_Contig_6431
295 JGI24740J21852_10000291
296 JGI24735J21928_10003549
297 rootH1_10313850
298 Ga0055526_1000186
299 Ga0055530_10024286
300 Ga0065714_10002270
301 Ga0065714_10091014
302 Ga0070666_10023678
303 Ga0070680_100259228
304 Ga0070660_100097744
305 Ga0070674_100027673
306 Ga0070659_100202450
307 Ga0070708_100316227
308 Ga0070678_100107374
309 Ga0070678_100357563
310 Ga0068867_100032634
311 Ga0070707_100003764
312 Ga0068853_100019236
313 Ga0068853_100057921
314 Ga0070665_100015139
315 Ga0068855_100005342
316 Ga0068855_100200014
317 Ga0068857_100019379
318 Ga0068856_100013087
319 Ga0068856_100085857
320 Ga0070702_100135186
321 Ga0068859_100014175
322 Ga0068859_100493247
323 Ga0068870_10176649
324 Ga0068863_100050111
325 Ga0068858_100018470
326 Ga0068858_100231421
327 Ga0068862_100006067
328 Ga0097620_100014175
329 Ga0097620_100493196
330 Ga0099824_1028299
331 Ga0105250_10009634
332 Ga0105240_10026031
333 Ga0105240_10035354
334 Ga0114129_10443730
335 Ga0105241_10004255
336 Ga0105242_10427765
337 Ga0105248_10003226
338 Ga0105237_10016503
339 Ga0105238_10001122
340 Ga0105238_10029257
341 Ga0105239_10017541
342 Ga0105239_10038792
343 Ga0157373_10000380
344 Ga0157373_10000529
345 Ga0157371_10001343
346 Ga0157371_10002287
347 Ga0157371_10002921
348 Ga0157370_10003020
349 Ga0157370_10098289
350 Ga0171462_1010
351 Ga0157378_10017426
352 Ga0163162_10012747
353 Ga0163162_10093401
354 Ga0157375_10030928
355 Ga0157375_10119674
356 Ga0182008_10014241
357 Ga0182008_10132850
358 Ga0182006_1001142
359 Ga0182005_1000064
360 Ga0163161_10001482
361 Ga0209676_1005064
362 Ga0209564_1000023
363 Ga0209050_1000904
364 Ga0209051_1014660
365 Ga0207696_1045638
366 Ga0207655_1011830
367 Ga0207655_1014617
368 Ga0207647_10079880
369 Ga0207654_10000136
370 Ga0207695_10002311
371 Ga0207695_10039974
372 Ga0207695_10429173
373 Ga0207671_10009100
374 Ga0207671_10283092
375 Ga0207657_10165304
376 Ga0207646_10019948
377 Ga0207694_10000135
378 Ga0207690_10154991
379 Ga0207669_10078283
380 Ga0207711_10002081
381 Ga0207667_10018774
382 Ga0207667_10277936
383 Ga0207640_10443191
384 Ga0207639_10015524
385 Ga0207702_10000026
386 Ga0207702_10049897
387 Ga0207674_10034098
388 Ga0207683_10054558
389 Ga0207698_10009063
390 Ga0209389_1000089
391 Ga0209589_1000148
392 Ga0209489_100512
393 Ga0268266_10001076
394 Ga0268265_10002115
395 Ga0265318_10013218
396 Ga0265338_10045254
397 Ga0265324_10001985
398 Ga0316178_1080346
399 Ga0316181_1105892
400 Ga0265330_10004615
401 Ga0265325_10003211
402 Ga0265325_10022889
403 Ga0265340_10012112
404 Ga0265339_10001890
405 Ga0265331_10079326
406 Ga0265327_10000645
407 Ga0265327_10001763
408 Ga0265327_10012398
409 Ga0265316_10037398
410 Ga0265313_10001710
411 Ga0265314_10006547
412 Ga0265314_10054967
413 Ga0265314_10082906
414 Ga0265342_10011646
415 Ga0373953_0100821
416 Ga0373955_0052455
417 Ga0373935_0048115
418 Ga0373935_0059314
419 Ga0373927_0179150
420 Ga0373947_0016665
421 Ga0373937_0002582
422 Ga0373937_0034202
423 Ga0373937_0146413
424 Ga0373925_0013184
425 Ga0373925_0034920
426 Ga0373925_0156757
427 Ga0400489_33879
428 Ga0436363_0309102
429 Ga0439438_000273
430 Ga0439447_015827
431 Ga0451849_1084675
432 Ga0439432_000110
433 Ga0439432_000190
434 Ga0439452_005941
435 Ga0451577_0000002
436 Ga0451577_0308552
437 Ga0451577_0411865
438 Ga0453683_0000002
439 Ga0453683_0000013
440 Ga0453683_0000742
441 Ga0453683_0105136
442 Ga0453684_0000002
443 Ga0453684_0000040
444 Ga0453684_0022802
445 Ga0451576_0000037
446 Ga0451576_0001954
447 Ga0495617_025709
448 Ga0495627_000169
449 Ga0495591_000593
450 Ga0495591_011464
451 Ga0495629_0007482
452 Ga0495629_0083324
453 Ga0495638_0005865
454 Ga0495638_0006677
455 Ga0495641_0040739
456 Ga0495653_0039771
457 Ga0495653_0043800
458 Ga0495653_0066436
459 Ga0495650_0001040
460 Ga0495580_0101656
461 Ga0495582_0000196
462 Ga0495605_0000753
463 Ga0495605_0013803
464 Ga0495639_0000020
465 Ga0495639_0003060
466 Ga0495584_0034485
467 Ga0495585_0001241
468 Ga0495585_0001746
469 Ga0495594_0003510
470 Ga0495594_0173608
471 Ga0495607_0029728
472 Ga0495607_0040823
473 Ga0495583_0002002
474 Ga0495606_0001684
475 Ga0495608_0015181
476 Ga0495610_0106095
477 Ga0495616_0004669
478 Ga0495630_0090537
479 Ga0495630_0145177
480 Ga0495631_0001718
481 Ga0495632_0000481
482 Ga0495632_0000744
483 Ga0495643_0015630
484 Ga0495643_0022625
485 Ga0495644_0000498
486 Ga0495666_0009365
487 Ga0495666_0019136
488 Ga0495666_0021687
489 Ga0495642_0000173
490 Ga0495654_0014352
491 Ga0495587_0000318
492 Ga0495587_0000727
493 Ga0495587_0028740
494 Ga0495609_0000661
495 Ga0495597_0058494
496 Ga0495645_0071111
497 Ga0495667_0000797
498 Ga0495668_0027942
499 Ga0495634_0221269
500 Ga0495611_0011148
501 Ga0495625_0016385
502 Ga0495635_0027540
503 Ga0495635_0087159
504 Ga0495659_0004629
505 Ga0495659_0019741
506 Ga0495661_0041263
507 Ga0495657_0008406
508 Ga0495623_0039153
509 Ga0495646_0000141
510 Ga0495646_0009457
511 Ga0495647_0063488
512 Ga0495658_0000958
513 Ga0495669_0000808
514 Ga0495613_0001873
515 Ga0495613_0098808
516 Ga0495671_0005186
517 Ga0495649_0000957
518 Ga0495589_0001569
519 Ga0495600_0004005
520 Ga0495600_0010602
521 Ga0495660_0003249
522 Ga0495581_0002410
523 Ga0495581_0018308
524 Ga0495604_0020783
525 Ga0495672_0001866
526 Ga0495672_0001998
527 Ga0495680_0000664
528 Ga0495680_0002689
529 Ga0495683_0003032
530 Ga0495687_001469
531 Ga0495687_005049
532 Ga0495675_0000630
533 Ga0495675_0091623
534 Ga0495677_0000289
535 Ga0495679_005232
536 Ga0495673_0002275
537 Ga0495684_0078000
538 Ga0495686_0041788
539 Ga0495593_0000168
540 Ga0495593_0007018
541 Ga0496100_0003506
542 Ga0496101_0005244
543 Ga0496102_0000519
544 Ga0496103_0001796
545 Ga0496106_0207754
546 Ga0496107_0223774
547 Ga0496116_0000427
548 Ga0496117_0004742
549 Ga0496117_0039965
550 Ga0496117_0075048
551 Ga0496118_0001202
552 Ga0496118_0166902
553 Ga0496121_0002139
554 Ga0496123_0074502
555 Ga0496126_0019237
556 Ga0495682_0000341
557 Ga0495682_0000536
558 Ga0495682_0108352
559 Ga0501043_0144193
560 nmdc:mga0sz30_12221_c1
561 Ga0500618_000735
562 Ga0500616_0012007
563 2511181803
564 2599904358
565 2624481955
566 2624490954
567 2671125967
568 2738819942
569 2738832422
570 2738873949
571 2739185579
572 2739220547
573 2770199683
574 2776268366
575 2776283193
576 2819613358
577 2860340867
578 2917703677
579 2919530066
580 2919701946
581 2931396610
582 2945975227
583 2953995643
584 8019779319

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

53

288

0.96

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

54

351

0.87

PF04321

RmlD_sub_bind

RmlD substrate binding domain

51

308

0.85

PF13460

NAD_binding_10

NAD(P)H-binding

57

277

0.8

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

53

319

0.79

PF05368

NmrA

NmrA-like family

54

314

0.79

PF07993

NAD_binding_4

Male sterility protein

55

272

0.75

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

54

284

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ys9-assembly1.cif.gz_B crystal structure of udp-glucose 4-epimerase (rv3634c) in complex with both udp-glucose and udp-galactose in chaina from mycobacterium tuberculosis 0.9542 40 345
7ys8-assembly1.cif.gz_B crystal structure of udp-glucose 4-epimerase (rv3634c) from mycobacterium tuberculosis 0.9479 40 346
6wjb-assembly1.cif.gz_A udp-glcnac c4-epimerase from pseudomonas protegens in complex with nad and udp-glcnac 0.9425 39 341
6wja-assembly1.cif.gz_A udp-glcnac c4-epimerase mutant s121a/y146f from pseudomonas protegens in complex with udp-galnac 0.9387 39 341
7ys9-assembly1.cif.gz_B crystal structure of udp-glucose 4-epimerase (rv3634c) in complex with both udp-glucose and udp-galactose in chaina from mycobacterium tuberculosis 0.9363 40 345
ID Description Score Start End Superfamily
6dntA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9236 36 275 3.40.50.720
4zrmB02 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.9172 213 345 3.90.25.10
6dntA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9148 36 275 3.40.50.720
af_Q4E0S3_8_323_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9129 39 347 3.40.50.720
af_P72050_1_314_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9122 40 348 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A1B3PHC0-F1-model_v4 NAD dependent epimerase/dehydratase family protein 0.979 181 345
AF-A0A2U1WT06-F1-model_v4 NAD-dependent epimerase/dehydratase domain-containing protein 0.9719 38 347
AF-A0A855KUL5-F1-model_v4 deleted 0.97 36 347
AF-A0A1E3W606-F1-model_v4 NAD-dependent epimerase/dehydratase domain-containing protein 0.9685 66 348
AF-A0A1M6P1Q5-F1-model_v4 UDP-glucose 4-epimerase 0.9658 38 346

Map