F391096

General Info

Members Datasets Scaffolds Average Seq Length
292 186 584 574

Family's Representative Sequence

Representative Sequence 3300045976|Ga0466967_0088905|Ga0466967_0088905_177_2102
Length 641
Sequence MTPIGPIRGLKLRAAGIAVDLCQSRSDVSCAAANARSKTAKNTLAAGTTGRKIDLSSCRSREVQMDRPSSEARPSAYLESLMQAGQQATKQFDDAFVAAMGIEDKPSQGERPSPFAIAAGLQHQYWSPILDFWRGFFGDKSGPGTNASARVSRGDRRFKDDVWGQSPYYDLLKRSYLSSSKQLSELVDQALVDDRSKLQLRFYARQFIDAMSPSNFPATNPDVIRTAIRTRSASLASGMQNLIEDIQKGRITRVDEAAFEIGRNLAVTPGAVVFENELIQLIQYTPTTAEVEKTPLLIVPPCINKYYLLDLGAGNSFVEYAVAQGHQVFLISWRSAVAETQHLTWDDYLTLGPLKAIDVVRDIADVDKVHALGFCVGGTILGCAAGVLAARGEDKLATMTLLTTMLDFADTGEIGLLIDQASTAMREAAIGSGGILPGKELAFTFGTLRANDLIWRYVVDSYMKGAPPEAFDLLYWDSDSVSLPGPMYCWYTRNTYVENKIKQPGATTQCGVPVDLSKARMPLYLLASREDHIVPWQSAYRSKGLIGKDARFVLAASGHVAGVINPPARNKRSYWTRADLDDDAADWLDKAEEKPGSWWPDWDAWMKRYSTGTVAAPAGPGNARYRFIEDAPGRYVKQKSN

Samples

Sample ID Description Type Environment
1 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
36 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
37 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
38 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
39 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
40 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
41 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
42 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
43 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
44 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
45 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
46 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
51 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
52 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
53 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
54 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
58 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
59 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
60 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
61 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
65 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
66 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
67 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
68 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
105 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
109 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
110 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
111 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
112 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
113 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
114 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
115 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
116 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
117 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
118 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
119 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
120 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
121 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
122 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
123 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
124 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
125 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
126 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
127 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
128 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
129 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
130 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
131 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
132 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
133 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
134 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
135 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
136 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
137 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
138 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
139 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
140 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
141 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
142 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
143 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
144 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
145 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
146 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
147 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
148 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
149 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
150 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
151 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
152 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
153 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
154 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
155 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
156 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
157 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
158 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
159 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
160 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
161 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
162 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
163 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
164 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
165 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
166 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
167 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
168 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
172 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
173 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
174 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
175 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
176 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
177 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
178 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
179 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
180 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
181 2524023228 Bradyrhizobium sp. Th.b2 Isolate Nodule
182 2526164512 Azovibrio restrictus DSM 23866 Isolate Unclassified
183 2791355199
184 2841957949 Bradyrhizobium sp. CIR1 Isolate Nodule
185 2885409591 Bradyrhizobium sp. NAS80.1 Isolate Unclassified
186 2904699407

Type Distribution

Type Percentage (%)
Metagenomes 98.28
Metatranscriptomes 0.34
Isolates 1.38

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.42
Nodule 0.68
Rhizoplane 6.85
Rhizosphere 85.62
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466967_0088905 3300045976 Bacteria 2804
2 JGI24740J21852_10002193 3300001979 Bacteria 8926
3 JGI24739J22299_10005524 3300001989 Bacteria 4795
4 JGI24737J22298_10002109 3300001990 Bacteria 7093
5 Ga0068868_100022976 3300005338 Bacteria 4715
6 Ga0070661_100061166 3300005344 Bacteria 2764
7 Ga0070661_100063597 3300005344 Bacteria 2711
8 Ga0070668_100045943 3300005347 Bacteria 3351
9 Ga0070668_100061580 3300005347 Bacteria 2907
10 Ga0070675_100158133 3300005354 Bacteria 1947
11 Ga0070674_100059226 3300005356 Bacteria 2665
12 Ga0070709_10001701 3300005434 Bacteria 11962
13 Ga0070709_10015359 3300005434 Bacteria 4356
14 Ga0070714_100012107 3300005435 Bacteria 6870
15 Ga0070713_100001489 3300005436 Bacteria 14921
16 Ga0070710_10000992 3300005437 Bacteria 13504
17 Ga0070710_10022245 3300005437 Bacteria 3313
18 Ga0070710_10024735 3300005437 Bacteria 3172
19 Ga0070710_10058819 3300005437 Bacteria 2181
20 Ga0070711_100022518 3300005439 Bacteria 4085
21 Ga0070700_100020405 3300005441 Bacteria 3838
22 Ga0070663_100020753 3300005455 Bacteria 4353
23 Ga0070663_100097397 3300005455 Bacteria 2190
24 Ga0070678_100011962 3300005456 Bacteria 5375
25 Ga0070662_100006597 3300005457 Bacteria 7491
26 Ga0070662_100016209 3300005457 Bacteria 5000
27 Ga0070681_10013614 3300005458 Bacteria 8092
28 Ga0068867_100015513 3300005459 Bacteria 5406
29 Ga0070706_100150828 3300005467 Bacteria 2170
30 Ga0070698_100031823 3300005471 Bacteria 5467
31 Ga0068853_100011174 3300005539 Bacteria 7283
32 Ga0068853_100081561 3300005539 Bacteria 2832
33 Ga0068853_100131988 3300005539 Bacteria 2237
34 Ga0070665_100014156 3300005548 Bacteria 8015
35 Ga0070665_100054641 3300005548 Bacteria 4005
36 Ga0070665_100083780 3300005548 Bacteria 3193
37 Ga0068855_100034974 3300005563 Bacteria 5987
38 Ga0068857_100006113 3300005577 Bacteria 10281
39 Ga0068857_100046675 3300005577 Bacteria 3844
40 Ga0068857_100156040 3300005577 Bacteria 2070
41 Ga0068854_100005743 3300005578 Bacteria 7848
42 Ga0068854_100006394 3300005578 Bacteria 7493
43 Ga0068856_100027426 3300005614 Bacteria 5557
44 Ga0068852_100063596 3300005616 Bacteria 3213
45 Ga0068866_10008367 3300005718 Bacteria 4357
46 Ga0068863_100161684 3300005841 Bacteria 2145
47 Ga0068858_100083291 3300005842 Bacteria 2974
48 Ga0068858_100103050 3300005842 Bacteria 2662
49 Ga0068860_100103282 3300005843 Bacteria 2720
50 Ga0068862_100033244 3300005844 Bacteria 4358
51 Ga0068862_100049888 3300005844 Bacteria 3576
52 Ga0081455_10002308 3300005937 Bacteria 22737
53 Ga0081455_10007349 3300005937 Bacteria 11617
54 Ga0081455_10013277 3300005937 Bacteria 8158
55 Ga0081455_10034096 3300005937 Bacteria 4565
56 Ga0081540_1001375 3300005983 Bacteria 21094
57 Ga0081540_1002604 3300005983 Bacteria 14664
58 Ga0081540_1002628 3300005983 Bacteria 14598
59 Ga0081540_1008073 3300005983 Bacteria 7398
60 Ga0081540_1010793 3300005983 Bacteria 6141
61 Ga0081540_1019753 3300005983 Bacteria 4081
62 Ga0081539_10002611 3300005985 Bacteria 24703
63 Ga0075365_10015050 3300006038 Bacteria 4669
64 Ga0075363_100004654 3300006048 Bacteria 6034
65 Ga0075363_100021177 3300006048 Bacteria 3271
66 Ga0070715_10001016 3300006163 Bacteria 7905
67 Ga0070716_100071667 3300006173 Bacteria 2038
68 Ga0070712_100079007 3300006175 Bacteria 2377
69 Ga0075370_10004812 3300006353 Bacteria 6611
70 Ga0068871_100030886 3300006358 Bacteria 4222
71 Ga0068865_100005595 3300006881 Bacteria 7623
72 Ga0099794_10012607 3300007265 Bacteria 3654
73 Ga0105240_10008280 3300009093 Bacteria 14884
74 Ga0105240_10016402 3300009093 Bacteria 10030
75 Ga0105240_10018785 3300009093 Bacteria 9261
76 Ga0105240_10020973 3300009093 Bacteria 8696
77 Ga0111539_10021105 3300009094 Bacteria 8020
78 Ga0105245_10033424 3300009098 Bacteria 4559
79 Ga0105245_10064135 3300009098 Bacteria 3320
80 Ga0105247_10016354 3300009101 Bacteria 4444
81 Ga0105247_10028118 3300009101 Bacteria 3402
82 Ga0105241_10010704 3300009174 Bacteria 6730
83 Ga0105242_10021746 3300009176 Bacteria 5040
84 Ga0105248_10044246 3300009177 Bacteria 4993
85 Ga0105248_10065408 3300009177 Bacteria 4083
86 Ga0105248_10185985 3300009177 Bacteria 2341
87 Ga0105238_10000816 3300009551 Bacteria 32325
88 Ga0105238_10002016 3300009551 Bacteria 20491
89 Ga0105238_10031814 3300009551 Bacteria 5369
90 Ga0105238_10047428 3300009551 Bacteria 4331
91 Ga0105249_10112786 3300009553 Bacteria 2572
92 Ga0105239_10002547 3300010375 Bacteria 23135
93 Ga0105239_10029471 3300010375 Bacteria 6034
94 Ga0105239_10034688 3300010375 Bacteria 5542
95 Ga0105239_10051768 3300010375 Bacteria 4501
96 Ga0105246_10030172 3300011119 Bacteria 3578
97 Ga0157370_10029603 3300013104 Bacteria 5371
98 Ga0157369_10064817 3300013105 Bacteria 3934
99 Ga0157374_10063522 3300013296 Bacteria 3463
100 Ga0157374_10078163 3300013296 Bacteria 3133
101 Ga0157378_10048594 3300013297 Bacteria 3773
102 Ga0163162_10003361 3300013306 Bacteria 15303
103 Ga0163162_10063440 3300013306 Bacteria 3738
104 Ga0163162_10180976 3300013306 Bacteria 2234
105 Ga0157375_10035715 3300013308 Bacteria 4748
106 Ga0157375_10045168 3300013308 Bacteria 4287
107 Ga0157375_10085718 3300013308 Bacteria 3200
108 Ga0157375_10102592 3300013308 Bacteria 2946
109 Ga0157375_10103499 3300013308 Bacteria 2934
110 Ga0157375_10154271 3300013308 Bacteria 2434
111 Ga0157380_10030243 3300014326 Bacteria 4147
112 Ga0157380_10065964 3300014326 Bacteria 2911
113 Ga0157380_10176738 3300014326 Bacteria 1871
114 Ga0157376_10026647 3300014969 Bacteria 4571
115 Ga0157376_10087163 3300014969 Bacteria 2693
116 Ga0157376_10128421 3300014969 Bacteria 2258
117 Ga0163161_10043616 3300017792 Bacteria 3230
118 Ga0163161_10071088 3300017792 Bacteria 2545
119 Ga0224712_10029552 3300022467 Bacteria 1970
120 Ga0207692_10043287 3300025898 Bacteria 2240
121 Ga0207688_10015740 3300025901 Bacteria 4102
122 Ga0207647_10011760 3300025904 Bacteria 6122
123 Ga0207647_10033117 3300025904 Bacteria 3312
124 Ga0207685_10035723 3300025905 Bacteria 1816
125 Ga0207699_10051828 3300025906 Bacteria 2426
126 Ga0207684_10084874 3300025910 Bacteria 2697
127 Ga0207654_10000927 3300025911 Bacteria 16209
128 Ga0207707_10038399 3300025912 Bacteria 4184
129 Ga0207695_10013303 3300025913 Bacteria 9819
130 Ga0207695_10041025 3300025913 Bacteria 4955
131 Ga0207671_10019603 3300025914 Bacteria 5169
132 Ga0207693_10004012 3300025915 Bacteria 12514
133 Ga0207693_10017137 3300025915 Bacteria 5779
134 Ga0207693_10020193 3300025915 Bacteria 5299
135 Ga0207693_10040964 3300025915 Bacteria 3648
136 Ga0207693_10116909 3300025915 Bacteria 2094
137 Ga0207663_10001611 3300025916 Bacteria 10618
138 Ga0207649_10048321 3300025920 Bacteria 2624
139 Ga0207694_10000212 3300025924 Bacteria 56506
140 Ga0207687_10054032 3300025927 Bacteria 2809
141 Ga0207644_10070510 3300025931 Bacteria 2555
142 Ga0207706_10012110 3300025933 Bacteria 7855
143 Ga0207706_10023653 3300025933 Bacteria 5516
144 Ga0207709_10007384 3300025935 Bacteria 6124
145 Ga0207669_10001807 3300025937 Bacteria 9062
146 Ga0207665_10000118 3300025939 Bacteria 52078
147 Ga0207665_10005492 3300025939 Bacteria 8461
148 Ga0207665_10028455 3300025939 Bacteria 3691
149 Ga0207665_10028683 3300025939 Bacteria 3678
150 Ga0207691_10077688 3300025940 Bacteria 2990
151 Ga0207711_10007473 3300025941 Bacteria 9142
152 Ga0207711_10037386 3300025941 Bacteria 4123
153 Ga0207689_10021652 3300025942 Bacteria 5406
154 Ga0207667_10015869 3300025949 Bacteria 8533
155 Ga0207712_10026502 3300025961 Bacteria 3863
156 Ga0207668_10027384 3300025972 Bacteria 3711
157 Ga0207668_10030361 3300025972 Bacteria 3551
158 Ga0207668_10052747 3300025972 Bacteria 2815
159 Ga0207677_10043717 3300026023 Bacteria 2980
160 Ga0207639_10040408 3300026041 Bacteria 3481
161 Ga0207639_10084536 3300026041 Bacteria 2521
162 Ga0207639_10093590 3300026041 Bacteria 2410
163 Ga0207678_10012380 3300026067 Bacteria 7487
164 Ga0207678_10019882 3300026067 Bacteria 5902
165 Ga0207678_10023477 3300026067 Bacteria 5393
166 Ga0207678_10182761 3300026067 Bacteria 1791
167 Ga0207708_10024110 3300026075 Bacteria 4600
168 Ga0207708_10059826 3300026075 Bacteria 2908
169 Ga0207702_10000003 3300026078 Bacteria 434196
170 Ga0207702_10107133 3300026078 Bacteria 2478
171 Ga0207648_10005529 3300026089 Bacteria 12738
172 Ga0207648_10065733 3300026089 Bacteria 3162
173 Ga0207674_10006204 3300026116 Bacteria 14085
174 Ga0207674_10008379 3300026116 Bacteria 11956
175 Ga0207674_10022409 3300026116 Bacteria 6783
176 Ga0207674_10212469 3300026116 Bacteria 1883
177 Ga0207675_100013983 3300026118 Bacteria 7484
178 Ga0207675_100131566 3300026118 Bacteria 2373
179 Ga0207683_10028295 3300026121 Bacteria 4846
180 Ga0207683_10059791 3300026121 Bacteria 3348
181 Ga0207683_10073799 3300026121 Bacteria 3018
182 Ga0207683_10124306 3300026121 Bacteria 2318
183 Ga0209588_1007695 3300027671 Bacteria 3179
184 Ga0207428_10034987 3300027907 Bacteria 4110
185 Ga0207428_10095367 3300027907 Bacteria 2305
186 Ga0268266_10000807 3300028379 Bacteria 41568
187 Ga0268266_10016489 3300028379 Bacteria 6315
188 Ga0268265_10007492 3300028380 Bacteria 7370
189 Ga0268264_10199824 3300028381 Bacteria 1828
190 Ga0307509_10000079 3300031507 Bacteria 135772
191 Ga0307509_10038464 3300031507 Bacteria 5218
192 Ga0307509_10121398 3300031507 Bacteria 2590
193 Ga0265314_10041934 3300031711 Bacteria 3270
194 Ga0307516_10022231 3300031730 Bacteria 6517
195 Ga0307510_10001063 3300033180 Bacteria 29201
196 Ga0307510_10010662 3300033180 Bacteria 10924
197 Ga0373954_0047479 3300035118 Bacteria 2010
198 Ga0373927_0006468 3300035695 Bacteria 7982
199 Ga0373937_0009266 3300036401 Bacteria 8548
200 Ga0373937_0029105 3300036401 Bacteria 5002
201 Ga0373925_0073033 3300037068 Bacteria 2596
202 Ga0395900_0010762 3300037418 Bacteria 9358
203 Ga0395905_0087913 3300037471 Bacteria 2913
204 Ga0453684_0003766 3300044712 Bacteria 33538
205 Ga0451576_0018700 3300045051 Bacteria 7581
206 Ga0495617_005938 3300046452 Bacteria 4308
207 Ga0495603_0038670 3300046455 Bacteria 2861
208 Ga0495638_0053875 3300046460 Bacteria 2502
209 Ga0495638_0067204 3300046460 Bacteria 2201
210 Ga0495651_0001967 3300046462 Bacteria 15902
211 Ga0495653_0005788 3300046463 Bacteria 10114
212 Ga0495605_0038210 3300046474 Bacteria 2410
213 Ga0495605_0056400 3300046474 Bacteria 1895
214 Ga0495664_0015265 3300046477 Bacteria 4364
215 Ga0495664_0048685 3300046477 Bacteria 2516
216 Ga0495664_0058974 3300046477 Bacteria 2284
217 Ga0495584_0041815 3300046491 Bacteria 2313
218 Ga0495585_0031476 3300046492 Bacteria 3011
219 Ga0495608_0004911 3300046511 Bacteria 9576
220 Ga0495628_0043910 3300046516 Bacteria 3558
221 Ga0495628_0107770 3300046516 Bacteria 2145
222 Ga0495631_0038869 3300046518 Bacteria 2114
223 Ga0495643_0054613 3300046522 Bacteria 2138
224 Ga0495652_0014954 3300046529 Bacteria 6955
225 Ga0495652_0022047 3300046529 Bacteria 5657
226 Ga0495587_0001243 3300046536 Bacteria 16921
227 Ga0495587_0013058 3300046536 Bacteria 5224
228 Ga0495645_0011391 3300046543 Bacteria 6257
229 Ga0495622_0036977 3300046557 Bacteria 2275
230 Ga0495667_0000593 3300046559 Bacteria 23047
231 Ga0495667_0034455 3300046559 Bacteria 3386
232 Ga0495656_0006443 3300046615 Bacteria 4119
233 Ga0495668_0015371 3300046616 Bacteria 4471
234 Ga0495659_0003164 3300046664 Bacteria 5281
235 Ga0495657_0000637 3300046675 Bacteria 31781
236 Ga0495657_0001501 3300046675 Bacteria 20104
237 Ga0495623_0010488 3300046679 Bacteria 5997
238 Ga0495669_0002903 3300046684 Bacteria 7039
239 Ga0495669_0020768 3300046684 Bacteria 2845
240 Ga0495649_0034721 3300046694 Bacteria 2775
241 Ga0495600_0000157 3300046809 Bacteria 39158
242 Ga0495600_0015312 3300046809 Bacteria 4846
243 Ga0495604_0008415 3300047317 Bacteria 8152
244 Ga0495674_0039690 3300047319 Bacteria 4217
245 Ga0495674_0054366 3300047319 Bacteria 3516
246 Ga0495676_0047921 3300047321 Bacteria 3450
247 Ga0495680_0002928 3300047322 Bacteria 17140
248 Ga0495675_0001960 3300047444 Bacteria 12278
249 Ga0495675_0061623 3300047444 Bacteria 2376
250 Ga0495679_028783 3300047446 Bacteria 1819
251 Ga0495673_0030513 3300047469 Bacteria 2531
252 Ga0495602_0007959 3300048088 Bacteria 11078
253 Ga0495602_0015932 3300048088 Bacteria 7568
254 Ga0496100_0016145 3300048903 Bacteria 4378
255 Ga0496100_0097532 3300048903 Bacteria 2019
256 Ga0496102_0127763 3300048905 Bacteria 2377
257 Ga0496103_0009614 3300048906 Bacteria 5725
258 Ga0496104_0045900 3300048907 Bacteria 4111
259 Ga0496104_0149979 3300048907 Bacteria 2239
260 Ga0496105_0005122 3300048908 Bacteria 9937
261 Ga0496106_0020961 3300048909 Bacteria 4850
262 Ga0496106_0079557 3300048909 Bacteria 2517
263 Ga0496107_0039576 3300048910 Bacteria 3382
264 Ga0496108_0001200 3300048911 Bacteria 20310
265 Ga0496109_0055242 3300048912 Bacteria 3622
266 Ga0496110_0019705 3300048913 Bacteria 5683
267 Ga0496110_0060132 3300048913 Bacteria 3350
268 Ga0496112_0017894 3300048915 Bacteria 6669
269 Ga0496112_0078039 3300048915 Bacteria 3275
270 Ga0496113_0047862 3300048916 Bacteria 3179
271 Ga0496114_0137532 3300048917 Bacteria 2113
272 Ga0496115_0004785 3300048918 Bacteria 9825
273 Ga0496115_0081423 3300048918 Bacteria 2637
274 Ga0501034_0000638 3300049571 Bacteria 54454
275 Ga0501038_0131488 3300049574 Bacteria 2054
276 Ga0501047_0054457 3300049581 Bacteria 3869
277 Ga0501067_0021688 3300049583 Bacteria 3555
278 Ga0501070_0021678 3300049586 Bacteria 5387
279 nmdc:mga03n38_8678_c1 3300050490 Bacteria 3660
280 nmdc:mga0yw44_15454_c1 3300050492 Bacteria 4090
281 nmdc:mga0k408_72311_c1 3300050493 Bacteria 2014
282 nmdc:mga07m45_71750_c1 3300050496 Bacteria 1970
283 nmdc:mga0n895_73107_c1 3300050512 Bacteria 3403
284 nmdc:mga0sz30_15034_c1 3300050516 Bacteria 3055
285 Ga0495619_0016940 3300053085 Bacteria 4616
286 Ga0500651_0017082 3300053093 Bacteria 4468
287 2524533901 2524023228 Bacteria 10118060
288 2526210649 2526164512 Bacteria 4025691
289 2793083825
290 2841964571 2841957949 Bacteria 8652217
291 2885414964 2885409591 Bacteria 9235467
292 2904704389
293 Ga0466967_0088905
294 JGI24740J21852_10002193
295 JGI24739J22299_10005524
296 JGI24737J22298_10002109
297 Ga0068868_100022976
298 Ga0070661_100061166
299 Ga0070661_100063597
300 Ga0070668_100045943
301 Ga0070668_100061580
302 Ga0070675_100158133
303 Ga0070674_100059226
304 Ga0070709_10001701
305 Ga0070709_10015359
306 Ga0070714_100012107
307 Ga0070713_100001489
308 Ga0070710_10000992
309 Ga0070710_10022245
310 Ga0070710_10024735
311 Ga0070710_10058819
312 Ga0070711_100022518
313 Ga0070700_100020405
314 Ga0070663_100020753
315 Ga0070663_100097397
316 Ga0070678_100011962
317 Ga0070662_100006597
318 Ga0070662_100016209
319 Ga0070681_10013614
320 Ga0068867_100015513
321 Ga0070706_100150828
322 Ga0070698_100031823
323 Ga0068853_100011174
324 Ga0068853_100081561
325 Ga0068853_100131988
326 Ga0070665_100014156
327 Ga0070665_100054641
328 Ga0070665_100083780
329 Ga0068855_100034974
330 Ga0068857_100006113
331 Ga0068857_100046675
332 Ga0068857_100156040
333 Ga0068854_100005743
334 Ga0068854_100006394
335 Ga0068856_100027426
336 Ga0068852_100063596
337 Ga0068866_10008367
338 Ga0068863_100161684
339 Ga0068858_100083291
340 Ga0068858_100103050
341 Ga0068860_100103282
342 Ga0068862_100033244
343 Ga0068862_100049888
344 Ga0081455_10002308
345 Ga0081455_10007349
346 Ga0081455_10013277
347 Ga0081455_10034096
348 Ga0081540_1001375
349 Ga0081540_1002604
350 Ga0081540_1002628
351 Ga0081540_1008073
352 Ga0081540_1010793
353 Ga0081540_1019753
354 Ga0081539_10002611
355 Ga0075365_10015050
356 Ga0075363_100004654
357 Ga0075363_100021177
358 Ga0070715_10001016
359 Ga0070716_100071667
360 Ga0070712_100079007
361 Ga0075370_10004812
362 Ga0068871_100030886
363 Ga0068865_100005595
364 Ga0099794_10012607
365 Ga0105240_10008280
366 Ga0105240_10016402
367 Ga0105240_10018785
368 Ga0105240_10020973
369 Ga0111539_10021105
370 Ga0105245_10033424
371 Ga0105245_10064135
372 Ga0105247_10016354
373 Ga0105247_10028118
374 Ga0105241_10010704
375 Ga0105242_10021746
376 Ga0105248_10044246
377 Ga0105248_10065408
378 Ga0105248_10185985
379 Ga0105238_10000816
380 Ga0105238_10002016
381 Ga0105238_10031814
382 Ga0105238_10047428
383 Ga0105249_10112786
384 Ga0105239_10002547
385 Ga0105239_10029471
386 Ga0105239_10034688
387 Ga0105239_10051768
388 Ga0105246_10030172
389 Ga0157370_10029603
390 Ga0157369_10064817
391 Ga0157374_10063522
392 Ga0157374_10078163
393 Ga0157378_10048594
394 Ga0163162_10003361
395 Ga0163162_10063440
396 Ga0163162_10180976
397 Ga0157375_10035715
398 Ga0157375_10045168
399 Ga0157375_10085718
400 Ga0157375_10102592
401 Ga0157375_10103499
402 Ga0157375_10154271
403 Ga0157380_10030243
404 Ga0157380_10065964
405 Ga0157380_10176738
406 Ga0157376_10026647
407 Ga0157376_10087163
408 Ga0157376_10128421
409 Ga0163161_10043616
410 Ga0163161_10071088
411 Ga0224712_10029552
412 Ga0207692_10043287
413 Ga0207688_10015740
414 Ga0207647_10011760
415 Ga0207647_10033117
416 Ga0207685_10035723
417 Ga0207699_10051828
418 Ga0207684_10084874
419 Ga0207654_10000927
420 Ga0207707_10038399
421 Ga0207695_10013303
422 Ga0207695_10041025
423 Ga0207671_10019603
424 Ga0207693_10004012
425 Ga0207693_10017137
426 Ga0207693_10020193
427 Ga0207693_10040964
428 Ga0207693_10116909
429 Ga0207663_10001611
430 Ga0207649_10048321
431 Ga0207694_10000212
432 Ga0207687_10054032
433 Ga0207644_10070510
434 Ga0207706_10012110
435 Ga0207706_10023653
436 Ga0207709_10007384
437 Ga0207669_10001807
438 Ga0207665_10000118
439 Ga0207665_10005492
440 Ga0207665_10028455
441 Ga0207665_10028683
442 Ga0207691_10077688
443 Ga0207711_10007473
444 Ga0207711_10037386
445 Ga0207689_10021652
446 Ga0207667_10015869
447 Ga0207712_10026502
448 Ga0207668_10027384
449 Ga0207668_10030361
450 Ga0207668_10052747
451 Ga0207677_10043717
452 Ga0207639_10040408
453 Ga0207639_10084536
454 Ga0207639_10093590
455 Ga0207678_10012380
456 Ga0207678_10019882
457 Ga0207678_10023477
458 Ga0207678_10182761
459 Ga0207708_10024110
460 Ga0207708_10059826
461 Ga0207702_10000003
462 Ga0207702_10107133
463 Ga0207648_10005529
464 Ga0207648_10065733
465 Ga0207674_10006204
466 Ga0207674_10008379
467 Ga0207674_10022409
468 Ga0207674_10212469
469 Ga0207675_100013983
470 Ga0207675_100131566
471 Ga0207683_10028295
472 Ga0207683_10059791
473 Ga0207683_10073799
474 Ga0207683_10124306
475 Ga0209588_1007695
476 Ga0207428_10034987
477 Ga0207428_10095367
478 Ga0268266_10000807
479 Ga0268266_10016489
480 Ga0268265_10007492
481 Ga0268264_10199824
482 Ga0307509_10000079
483 Ga0307509_10038464
484 Ga0307509_10121398
485 Ga0265314_10041934
486 Ga0307516_10022231
487 Ga0307510_10001063
488 Ga0307510_10010662
489 Ga0373954_0047479
490 Ga0373927_0006468
491 Ga0373937_0009266
492 Ga0373937_0029105
493 Ga0373925_0073033
494 Ga0395900_0010762
495 Ga0395905_0087913
496 Ga0453684_0003766
497 Ga0451576_0018700
498 Ga0495617_005938
499 Ga0495603_0038670
500 Ga0495638_0053875
501 Ga0495638_0067204
502 Ga0495651_0001967
503 Ga0495653_0005788
504 Ga0495605_0038210
505 Ga0495605_0056400
506 Ga0495664_0015265
507 Ga0495664_0048685
508 Ga0495664_0058974
509 Ga0495584_0041815
510 Ga0495585_0031476
511 Ga0495608_0004911
512 Ga0495628_0043910
513 Ga0495628_0107770
514 Ga0495631_0038869
515 Ga0495643_0054613
516 Ga0495652_0014954
517 Ga0495652_0022047
518 Ga0495587_0001243
519 Ga0495587_0013058
520 Ga0495645_0011391
521 Ga0495622_0036977
522 Ga0495667_0000593
523 Ga0495667_0034455
524 Ga0495656_0006443
525 Ga0495668_0015371
526 Ga0495659_0003164
527 Ga0495657_0000637
528 Ga0495657_0001501
529 Ga0495623_0010488
530 Ga0495669_0002903
531 Ga0495669_0020768
532 Ga0495649_0034721
533 Ga0495600_0000157
534 Ga0495600_0015312
535 Ga0495604_0008415
536 Ga0495674_0039690
537 Ga0495674_0054366
538 Ga0495676_0047921
539 Ga0495680_0002928
540 Ga0495675_0001960
541 Ga0495675_0061623
542 Ga0495679_028783
543 Ga0495673_0030513
544 Ga0495602_0007959
545 Ga0495602_0015932
546 Ga0496100_0016145
547 Ga0496100_0097532
548 Ga0496102_0127763
549 Ga0496103_0009614
550 Ga0496104_0045900
551 Ga0496104_0149979
552 Ga0496105_0005122
553 Ga0496106_0020961
554 Ga0496106_0079557
555 Ga0496107_0039576
556 Ga0496108_0001200
557 Ga0496109_0055242
558 Ga0496110_0019705
559 Ga0496110_0060132
560 Ga0496112_0017894
561 Ga0496112_0078039
562 Ga0496113_0047862
563 Ga0496114_0137532
564 Ga0496115_0004785
565 Ga0496115_0081423
566 Ga0501034_0000638
567 Ga0501038_0131488
568 Ga0501047_0054457
569 Ga0501067_0021688
570 Ga0501070_0021678
571 nmdc:mga03n38_8678_c1
572 nmdc:mga0yw44_15454_c1
573 nmdc:mga0k408_72311_c1
574 nmdc:mga07m45_71750_c1
575 nmdc:mga0n895_73107_c1
576 nmdc:mga0sz30_15034_c1
577 Ga0495619_0016940
578 Ga0500651_0017082
579 2524533901
580 2526210649
581 2793083825
582 2841964571
583 2885414964
584 2904704389

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07167

PhaC_N

Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus

154

321

0.99

PF00561

Abhydrolase_1

alpha/beta hydrolase fold

295

566

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
5xav-assembly1.cif.gz_B structure of phac from chromobacterium sp. usm2 0.9442 193 570
5xav-assembly1.cif.gz_A structure of phac from chromobacterium sp. usm2 0.9424 193 570
6k3c-assembly1.cif.gz_A crystal structure of class i pha synthase (phac) mutant from chromobacterium sp. usm2 bound to coenzyme a. 0.9337 193 570
5xav-assembly1.cif.gz_B structure of phac from chromobacterium sp. usm2 0.92 193 570
5xav-assembly1.cif.gz_A structure of phac from chromobacterium sp. usm2 0.9181 193 570
ID Description Score Start End Superfamily
af_K7KHX7_124_277_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.7894 453 494 3.40.50.1820
af_O33185_49_361_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.7612 213 541 3.40.50.1820
af_O33185_49_361_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.7544 213 541 3.40.50.1820
af_Q9N366_39_241_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.7365 204 503 3.40.50.1820
5cmlB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.7108 214 494 3.40.50.1820
ID Description Score Start End GO Terms
AF-A0A3B8W951-F1-model_v4 Class I poly(R)-hydroxyalkanoic acid synthase 0.9928 206 349 GO:0016746
GO:0042619
AF-A0A1I5AME1-F1-model_v4 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 0.9825 213 322 GO:0016746
GO:0042619
AF-A0A537FIE3-F1-model_v4 Alpha/beta fold hydrolase 0.9747 231 575 GO:0016787
AF-A0A356HNP0-F1-model_v4 deleted 0.9743 217 571
AF-A0A158KMC3-F1-model_v4 Poly(R)-hydroxyalkanoic acid synthase, class I 0.9721 289 571

Map