F391073

General Info

Members Datasets Scaffolds Average Seq Length
292 157 256 375

Family's Representative Sequence

Representative Sequence 3300042006|Ga0439432_017994|Ga0439432_017994_875_2101
Length 408
Sequence MTPICSITSRSTASEGASPIHALFADTTVSMTNTDHRVQGLDNDDVAADWPAIDDAELAWLRGHYPVLEGDCHVVWHSPRPFSAAALVECGSRRCFIKRHHRRVRTADVLVEEHRFIAHLAAAGLPVVQVLQACDGATAIAHGDWTYELHAQGDGHDLYRDSPSWTPLGDAAQARTAGAMLARLHLASASYPAPQRSTHLLVARDDLIRAHDPLSLLQRELPDRPGLASYLSRQQWEHDLQRAVLPWHAALGDRLAAEPVLWGHNDWHVSNLLWHGQGATASIATVFDFGLASPTSALFDLATAIERNAIAWLDAGGDGPLAHADIALALLAGYRQVRPLEAAQVHLLADLLPVVHLDFALSEVEYFQGVTGSPANADVAYHTFLLGHADWFASPPGRALLDALHAAA

Samples

Sample ID Description Type Environment
1 2547132130 Stenotrophomonas maltophilia RR-10 Isolate Unclassified
2 2576861471 Stenotrophomonas rhizophila DSM 14405 Isolate Rhizosphere
3 2593339238 Luteibacter sp. UNCMF366Tsu5.1 Isolate Unclassified
4 2593339239 Luteibacter sp. UNCMF331Sha3.1 Isolate Unclassified
5 2643221562 Rhodanobacter sp. Root561 Isolate Unclassified
6 2718218334 Luteibacter rhizovicinus LJ96 Isolate Rhizosphere
7 2738543009 Luteibacter sp. OK325 Isolate Unclassified
8 2747842428 Stenotrophomonas sp. WCS2014-113 Isolate Unclassified
9 2765235840 Stenotrophomonas maltophilia AA1 Isolate Unclassified
10 2816332141 Stenotrophomonas muris 1190 (v2) (version 2) Isolate Unclassified
11 2842391507 Stenotrophomonas maltophilia SEMIA 4027 Isolate Nodule
12 2842757796 Stenotrophomonas sp. R-72406 Isolate Unclassified
13 2842780639 Pseudoxanthomonas sp. R-71986 Isolate Unclassified
14 2842914999 Luteibacter sp. R-72151 Isolate Unclassified
15 2842918807 Luteibacter sp. R-73110 Isolate Unclassified
16 2852649853 Stenotrophomonas sp. JAI102 Isolate Rhizosphere
17 2857442823 Stenotrophomonas sp. R-74235 Isolate Unclassified
18 2874220319 Stenotrophomonas maltophilia PS5 Isolate Unclassified
19 2884338543 Luteibacter pinisoli MAH-14 Isolate Rhizosphere
20 2919089067 Stenotrophomonas sp. 1337 Isolate Rhizosphere
21 2919134579 Stenotrophomonas geniculata 1733 Isolate Rhizosphere
22 2919404418 Luteibacter sp. 3190 Isolate Unclassified
23 2928496128 Stenotrophomonas indicatrix 1163 Isolate Unclassified
24 2931380184 Stenotrophomonas sp. DR822 Isolate Rhizosphere
25 2937610967 Stenotrophomonas maltophilia EP20 Isolate Unclassified
26 2939589442 Stenotrophomonas rhizophila 716 Isolate Rhizosphere
27 2939622612 Stenotrophomonas sp. 2619 Isolate Rhizosphere
28 2939626828 Stenotrophomonas sp. 2694 Isolate Rhizosphere
29 2941475908 Stenotrophomonas rhizophila 2680 Isolate Rhizosphere
30 2953994433 Luteibacter sp. W1I16 Isolate Rhizosphere
31 2961047084 Stenotrophomonas maltophilia EP5 Isolate Unclassified
32 2961064222 Stenotrophomonas maltophilia EP13 Isolate Unclassified
33 2974307012 Stenotrophomonas sp. SORGH_AS_0282 Isolate Unclassified
34 2977247770 Stenotrophomonas rhizophila SORGH_AS 457 Isolate Unclassified
35 2984514374 Stenotrophomonas sp. SORGH_AS282 Isolate Aerial Root
36 2987605356 Stenotrophomonas sp. ATCM1_4 Isolate Unclassified
37 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
38 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
39 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
40 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
41 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
42 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
43 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
44 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
45 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
46 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
47 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
48 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
49 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
50 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
51 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
52 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
53 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
54 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
55 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
56 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
57 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
60 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
63 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
64 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
65 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
66 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
67 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
69 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
71 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
72 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
73 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
74 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
76 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
77 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
79 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
80 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
90 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
91 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
92 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
93 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
94 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
95 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
96 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
97 3300042533 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 Metagenome Rhizosphere
98 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
99 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
100 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
101 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
102 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
103 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
104 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
105 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
106 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
107 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
108 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
109 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
110 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
111 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
112 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
113 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
114 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
115 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
116 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
117 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
118 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
119 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
120 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
121 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
122 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
123 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
124 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
125 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
126 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
127 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
128 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
129 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
130 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
131 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
132 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
133 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
134 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
135 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
136 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
137 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
138 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
139 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
140 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
141 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
142 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
143 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
144 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
145 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
146 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
147 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
148 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
149 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
150 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
151 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
152 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
153 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
154 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
155 3300053128 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 endosphere Metagenome Endosphere
156 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
157 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.33
Metatranscriptomes 0.34
Isolates 12.33

Biome Distribution

Category Percentage (%)
Aerial Root 0.34
Bulb 0
Endosphere 14.38
Nodule 0.34
Rhizoplane 3.08
Rhizosphere 47.26
Stem 0
Stem Tuber 0
Unclassified 34.59

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24738J21930_10000953 3300002075 Bacteria 8301
2 JGI25152J39213_1013035 3300002773 Bacteria 1751
3 rootH2_10013664 3300003320 Bacteria 18163
4 Ga0006562J51391_1030999 3300003578 Bacteria 2970
5 Ga0055526_1000087 3300003771 Bacteria 85247
6 Ga0055537_1000105 3300003773 Bacteria 63223
7 Ga0055536_1004310 3300003781 Bacteria 7319
8 Ga0055536_1004317 3300003781 Bacteria 7311
9 Ga0055534_1000125 3300003784 Bacteria 57350
10 Ga0055528_1000381 3300003790 Bacteria 36007
11 Ga0055530_10000694 3300003791 Bacteria 28438
12 Ga0055530_10003099 3300003791 Bacteria 9852
13 Ga0055531_10005596 3300003794 Bacteria 7319
14 Ga0055531_10005604 3300003794 Bacteria 7311
15 Ga0055531_10033754 3300003794 Bacteria 1640
16 Ga0058692_1000005 3300003856 Bacteria 398815
17 Ga0065165_1000205 3300005262 Bacteria 102670
18 Ga0065704_10028386 3300005289 Bacteria 1582
19 Ga0065704_10122132 3300005289 Bacteria 1754
20 Ga0070668_100000821 3300005347 Bacteria 21404
21 Ga0070669_100083507 3300005353 Bacteria 2382
22 Ga0070665_100010527 3300005548 Bacteria 9360
23 Ga0070665_100049263 3300005548 Bacteria 4227
24 Ga0081539_10039381 3300005985 Bacteria 2789
25 Ga0075369_10005597 3300006186 Bacteria 4703
26 Ga0105244_10006101 3300009036 Bacteria 7875
27 Ga0105243_10089312 3300009148 Bacteria 2533
28 Ga0105239_10002546 3300010375 Bacteria 23137
29 Ga0157371_10000209 3300013102 Bacteria 85823
30 Ga0157371_10108164 3300013102 Bacteria 1973
31 Ga0157371_10123195 3300013102 Bacteria 1843
32 Ga0157371_10124710 3300013102 Bacteria 1831
33 Ga0157370_10017326 3300013104 Bacteria 7271
34 Ga0157370_10055795 3300013104 Bacteria 3761
35 Ga0163162_10149031 3300013306 Bacteria 2456
36 Ga0182008_10000031 3300014497 Bacteria 166109
37 Ga0182008_10004514 3300014497 Bacteria 8125
38 Ga0182006_1000171 3300015261 Bacteria 68591
39 Ga0182006_1003914 3300015261 Bacteria 7458
40 Ga0182006_1006178 3300015261 Bacteria 5596
41 Ga0182007_10000004 3300015262 Bacteria 485875
42 Ga0182007_10026313 3300015262 Bacteria 2018
43 Ga0182005_1001004 3300015265 Bacteria 12093
44 Ga0182005_1004131 3300015265 Bacteria 4746
45 Ga0182005_1023890 3300015265 Bacteria 1670
46 Ga0182005_1023913 3300015265 Bacteria 1670
47 Ga0163161_10000436 3300017792 Bacteria 34952
48 Ga0163161_10007097 3300017792 Bacteria 7744
49 Ga0163161_10017425 3300017792 Bacteria 5027
50 Ga0209674_102991 3300025226 Bacteria 3273
51 Ga0209437_101036 3300025233 Bacteria 9363
52 Ga0209148_1001867 3300025254 Bacteria 8754
53 Ga0209129_1000392 3300025258 Bacteria 35184
54 Ga0209565_1000033 3300025263 Bacteria 313960
55 Ga0209673_1000205 3300025273 Bacteria 118408
56 Ga0209675_1000018 3300025291 Bacteria 377481
57 Ga0209676_1000550 3300025292 Bacteria 57330
58 Ga0209676_1000920 3300025292 Bacteria 36566
59 Ga0209676_1001589 3300025292 Bacteria 20228
60 Ga0209564_1000568 3300025295 Bacteria 58602
61 Ga0209758_1007929 3300025297 Bacteria 7044
62 Ga0209050_1000158 3300025298 Bacteria 157468
63 Ga0209050_1000354 3300025298 Bacteria 88429
64 Ga0209050_1022229 3300025298 Bacteria 2278
65 Ga0209256_1002021 3300025299 Bacteria 18090
66 Ga0209256_1005379 3300025299 Bacteria 7412
67 Ga0207426_1004892 3300025302 Bacteria 6327
68 Ga0209051_1001080 3300025303 Bacteria 25301
69 Ga0209257_1000180 3300025304 Bacteria 158090
70 Ga0209257_1000666 3300025304 Bacteria 53728
71 Ga0209257_1001021 3300025304 Bacteria 37671
72 Ga0209257_1006873 3300025304 Bacteria 7135
73 Ga0207655_1035721 3300025728 Bacteria 2214
74 Ga0207647_10000013 3300025904 Bacteria 144052
75 Ga0207649_10140052 3300025920 Bacteria 1654
76 Ga0207709_10000818 3300025935 Bacteria 24069
77 Ga0207668_10000469 3300025972 Bacteria 25356
78 Ga0209371_1000031 3300027312 Bacteria 399263
79 Ga0268266_10018973 3300028379 Bacteria 5859
80 Ga0268256_1000034 3300030500 Bacteria 398909
81 Ga0316183_1002809 3300030742 Bacteria 2187
82 Ga0307412_10000497 3300031911 Bacteria 23444
83 Ga0307412_10001990 3300031911 Bacteria 11315
84 Ga0439436_0000005 3300041404 Bacteria 168483
85 Ga0439465_0000093 3300041413 Bacteria 20099
86 Ga0439432_003860 3300042006 Bacteria 5525
87 Ga0439432_017994 3300042006 Bacteria 2366
88 Ga0450911_001145 3300042115 Bacteria 6536
89 Ga0450908_000006 3300042184 Bacteria 56117
90 Ga0450901_000884 3300042533 Bacteria 3509
91 Ga0466982_0000027 3300044672 Bacteria 62332
92 Ga0495627_003249 3300046453 Bacteria 7291
93 Ga0495627_010142 3300046453 Bacteria 3439
94 Ga0495590_0021359 3300046457 Bacteria 2295
95 Ga0495638_0000536 3300046460 Bacteria 43871
96 Ga0495638_0000877 3300046460 Bacteria 31058
97 Ga0495638_0036522 3300046460 Bacteria 3130
98 Ga0495650_0001908 3300046471 Bacteria 18486
99 Ga0495650_0027364 3300046471 Bacteria 2636
100 Ga0495584_0001814 3300046491 Bacteria 12391
101 Ga0495585_0000999 3300046492 Bacteria 23656
102 Ga0495607_0000196 3300046501 Bacteria 63991
103 Ga0495607_0004741 3300046501 Bacteria 9940
104 Ga0495583_0019447 3300046506 Bacteria 3545
105 Ga0495606_0000222 3300046507 Bacteria 100766
106 Ga0495606_0003796 3300046507 Bacteria 15696
107 Ga0495606_0005641 3300046507 Bacteria 11865
108 Ga0495606_0012190 3300046507 Bacteria 6927
109 Ga0495606_0045814 3300046507 Bacteria 2895
110 Ga0495610_0000858 3300046512 Bacteria 28398
111 Ga0495610_0006452 3300046512 Bacteria 8066
112 Ga0495610_0010726 3300046512 Bacteria 5667
113 Ga0495610_0022611 3300046512 Bacteria 3435
114 Ga0495610_0133280 3300046512 Bacteria 1077
115 Ga0495616_0000056 3300046513 Bacteria 101901
116 Ga0495616_0018941 3300046513 Bacteria 3764
117 Ga0495616_0103539 3300046513 Bacteria 1332
118 Ga0495620_0000789 3300046515 Bacteria 19450
119 Ga0495631_0000120 3300046518 Bacteria 52656
120 Ga0495631_0000204 3300046518 Bacteria 40651
121 Ga0495631_0000595 3300046518 Bacteria 23959
122 Ga0495632_0000014 3300046519 Bacteria 243913
123 Ga0495632_0006581 3300046519 Bacteria 7438
124 Ga0495632_0018706 3300046519 Bacteria 3794
125 Ga0495632_0086402 3300046519 Bacteria 1492
126 Ga0495637_0016089 3300046520 Bacteria 3501
127 Ga0495643_0000363 3300046522 Bacteria 61710
128 Ga0495648_0001431 3300046524 Bacteria 23362
129 Ga0495663_0000442 3300046525 Bacteria 15163
130 Ga0495663_0002336 3300046525 Bacteria 5739
131 Ga0495663_0002739 3300046525 Bacteria 5221
132 Ga0495633_0003393 3300046558 Bacteria 10660
133 Ga0495633_0007051 3300046558 Bacteria 6543
134 Ga0495611_0000034 3300046648 Bacteria 103287
135 Ga0495611_0000078 3300046648 Bacteria 68937
136 Ga0495625_0000002 3300046660 Bacteria 813323
137 Ga0495625_0001745 3300046660 Bacteria 25143
138 Ga0495625_0054043 3300046660 Bacteria 2869
139 Ga0495625_0090209 3300046660 Bacteria 2121
140 Ga0495625_0096333 3300046660 Bacteria 2038
141 Ga0495625_0268222 3300046660 Bacteria 1102
142 Ga0495661_0001142 3300046665 Bacteria 23194
143 Ga0495661_0091237 3300046665 Bacteria 1733
144 Ga0495670_0000166 3300046691 Bacteria 28919
145 Ga0495670_0001707 3300046691 Bacteria 10801
146 Ga0495670_0020670 3300046691 Bacteria 3246
147 Ga0495649_0004145 3300046694 Bacteria 9518
148 Ga0495589_0000192 3300046794 Bacteria 53416
149 Ga0495660_0000156 3300046810 Bacteria 74271
150 Ga0495660_0000273 3300046810 Bacteria 48544
151 Ga0495660_0005918 3300046810 Bacteria 7285
152 Ga0495672_0000330 3300047320 Bacteria 62176
153 Ga0495683_0001529 3300047323 Bacteria 14997
154 Ga0495679_000003 3300047446 Bacteria 787868
155 Ga0495673_0000004 3300047469 Bacteria 1354526
156 Ga0495673_0000127 3300047469 Bacteria 140402
157 Ga0495673_0001542 3300047469 Bacteria 18120
158 Ga0495681_0019559 3300047470 Bacteria 3693
159 Ga0495686_0000024 3300047472 Bacteria 400343
160 Ga0495686_0000375 3300047472 Bacteria 71924
161 Ga0495686_0005144 3300047472 Bacteria 10431
162 Ga0495686_0006156 3300047472 Bacteria 9277
163 Ga0495686_0028419 3300047472 Bacteria 3642
164 Ga0496100_0010154 3300048903 Bacteria 5323
165 Ga0496101_0000359 3300048904 Bacteria 30569
166 Ga0496102_0522715 3300048905 Bacteria 1109
167 Ga0496104_0401269 3300048907 Bacteria 1283
168 Ga0496105_0071317 3300048908 Bacteria 2871
169 Ga0496106_0000887 3300048909 Bacteria 21830
170 Ga0496106_0090273 3300048909 Bacteria 2364
171 Ga0496110_0089731 3300048913 Bacteria 2748
172 Ga0496113_0223927 3300048916 Bacteria 1499
173 Ga0496116_0000754 3300048919 Bacteria 41159
174 Ga0496116_0000987 3300048919 Bacteria 34890
175 Ga0496116_0044314 3300048919 Bacteria 3023
176 Ga0496117_0000351 3300048920 Bacteria 81280
177 Ga0496117_0002699 3300048920 Bacteria 21941
178 Ga0496117_0004543 3300048920 Bacteria 15219
179 Ga0496117_0013352 3300048920 Bacteria 7170
180 Ga0496117_0165735 3300048920 Bacteria 1289
181 Ga0496117_0172930 3300048920 Bacteria 1251
182 Ga0496118_0000056 3300048921 Bacteria 228660
183 Ga0496118_0000510 3300048921 Bacteria 64271
184 Ga0496118_0000714 3300048921 Bacteria 53628
185 Ga0496118_0001108 3300048921 Bacteria 41809
186 Ga0496118_0011272 3300048921 Bacteria 8746
187 Ga0496118_0012309 3300048921 Bacteria 8232
188 Ga0496118_0041464 3300048921 Bacteria 3644
189 Ga0496118_0052059 3300048921 Bacteria 3127
190 Ga0496118_0058834 3300048921 Bacteria 2868
191 Ga0496118_0060101 3300048921 Bacteria 2824
192 Ga0496119_0000047 3300048922 Bacteria 188401
193 Ga0496119_0006489 3300048922 Bacteria 10802
194 Ga0496119_0019908 3300048922 Bacteria 4917
195 Ga0496119_0046865 3300048922 Bacteria 2694
196 Ga0496119_0096075 3300048922 Bacteria 1673
197 Ga0496119_0115910 3300048922 Bacteria 1479
198 Ga0496120_0000260 3300048923 Bacteria 88375
199 Ga0496120_0086681 3300048923 Bacteria 1682
200 Ga0496121_0000829 3300048924 Bacteria 56313
201 Ga0496121_0001307 3300048924 Bacteria 42738
202 Ga0496121_0002059 3300048924 Bacteria 31832
203 Ga0496121_0005297 3300048924 Bacteria 16603
204 Ga0496121_0013451 3300048924 Bacteria 8786
205 Ga0496121_0029252 3300048924 Bacteria 5101
206 Ga0496121_0032511 3300048924 Bacteria 4741
207 Ga0496121_0073502 3300048924 Bacteria 2739
208 Ga0496121_0111177 3300048924 Bacteria 2090
209 Ga0496121_0277704 3300048924 Bacteria 1148
210 Ga0496122_0000791 3300048925 Bacteria 60779
211 Ga0496122_0007580 3300048925 Bacteria 12004
212 Ga0496122_0010571 3300048925 Bacteria 9482
213 Ga0496122_0014374 3300048925 Bacteria 7659
214 Ga0496122_0025931 3300048925 Bacteria 5074
215 Ga0496122_0038563 3300048925 Bacteria 3825
216 Ga0496122_0043699 3300048925 Bacteria 3507
217 Ga0496122_0044798 3300048925 Bacteria 3448
218 Ga0496123_0000658 3300048926 Bacteria 57055
219 Ga0496123_0001582 3300048926 Bacteria 30970
220 Ga0496123_0006858 3300048926 Bacteria 10908
221 Ga0496123_0011488 3300048926 Bacteria 7671
222 Ga0496123_0015774 3300048926 Bacteria 6174
223 Ga0496123_0042790 3300048926 Bacteria 3120
224 Ga0496123_0064846 3300048926 Bacteria 2325
225 Ga0496123_0101588 3300048926 Bacteria 1671
226 Ga0496123_0151290 3300048926 Bacteria 1252
227 Ga0496124_0000009 3300048927 Bacteria 734820
228 Ga0496124_0000282 3300048927 Bacteria 96697
229 Ga0496124_0000455 3300048927 Bacteria 71439
230 Ga0496124_0003607 3300048927 Bacteria 18803
231 Ga0496124_0004230 3300048927 Bacteria 16892
232 Ga0496124_0084450 3300048927 Bacteria 2603
233 Ga0496124_0099050 3300048927 Bacteria 2364
234 Ga0496124_0126962 3300048927 Bacteria 2030
235 Ga0496124_0142736 3300048927 Bacteria 1887
236 Ga0496124_0166329 3300048927 Bacteria 1713
237 Ga0496125_0001130 3300048928 Bacteria 40721
238 Ga0496125_0002397 3300048928 Bacteria 24412
239 Ga0496125_0003876 3300048928 Bacteria 17683
240 Ga0496125_0008465 3300048928 Bacteria 10767
241 Ga0496125_0012661 3300048928 Bacteria 8349
242 Ga0496125_0022955 3300048928 Bacteria 5778
243 Ga0496125_0026971 3300048928 Bacteria 5216
244 Ga0496125_0049961 3300048928 Bacteria 3468
245 Ga0496125_0130194 3300048928 Bacteria 1773
246 Ga0496126_0000238 3300048929 Bacteria 118994
247 Ga0496126_0039753 3300048929 Bacteria 4363
248 Ga0496126_0172090 3300048929 Bacteria 1844
249 Ga0495678_000026 3300049459 Bacteria 226978
250 Ga0495682_0002904 3300049460 Bacteria 7864
251 Ga0501034_0032619 3300049571 Bacteria 5289
252 Ga0500643_000138 3300053087 Bacteria 73474
253 Ga0500555_000108 3300053103 Bacteria 39384
254 Ga0500626_050506 3300053128 Bacteria 1871
255 Ga0500633_0000668 3300053160 Bacteria 5745
256 Ga0500645_001061 3300053730 Bacteria 15232

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046660 Ga0495625_0268222 Ga0495625_0268222_77_1000 301
2 3300046512 Ga0495610_0133280 Ga0495610_0133280_138_1055 304
3 3300048924 Ga0496121_0073502 Ga0496121_0073502_11_991 320
4 3300048924 Ga0496121_0277704 Ga0496121_0277704_128_1135 334
5 3300025292 Ga0209676_1000550 Ga0209676_10005508 340
6 3300046512 Ga0495610_0000858 Ga0495610_0000858_21935_23065 341
7 3300046518 Ga0495631_0000204 Ga0495631_0000204_30039_31169 341
8 3300048926 Ga0496123_0151290 Ga0496123_0151290_130_1233 343
9 3300013104 Ga0157370_10055795 Ga0157370_100557952 347
10 3300009036 Ga0105244_10006101 Ga0105244_100061012 348
11 3300009148 Ga0105243_10089312 Ga0105243_100893121 348
12 3300010375 Ga0105239_10002546 Ga0105239_1000254618 348
13 3300025728 Ga0207655_1035721 Ga0207655_10357213 348
14 3300025935 Ga0207709_10000818 Ga0207709_100008186 348
15 3300048920 Ga0496117_0000351 Ga0496117_0000351_3333_4466 348
16 3300048921 Ga0496118_0000056 Ga0496118_0000056_150713_151846 348
17 3300048927 Ga0496124_0004230 Ga0496124_0004230_12303_13436 348
18 3300048905 Ga0496102_0522715 Ga0496102_0522715_31_1098 349
19 3300003791 Ga0055530_10003099 Ga0055530_100030996 355
20 3300005985 Ga0081539_10039381 Ga0081539_100393812 355
21 3300025298 Ga0209050_1000158 Ga0209050_100015845 355
22 3300048925 Ga0496122_0000791 Ga0496122_0000791_44932_46068 356
23 3300048926 Ga0496123_0000658 Ga0496123_0000658_14708_15844 356
24 3300049571 Ga0501034_0032619 Ga0501034_0032619_3597_4730 356
25 3300003781 Ga0055536_1004310 Ga0055536_10043101 357
26 3300003791 Ga0055530_10000694 Ga0055530_1000069421 357
27 3300003794 Ga0055531_10005596 Ga0055531_100055961 357
28 3300025292 Ga0209676_1000920 Ga0209676_100092013 357
29 3300025298 Ga0209050_1000354 Ga0209050_100035419 357
30 3300025299 Ga0209256_1005379 Ga0209256_10053798 357
31 3300025303 Ga0209051_1001080 Ga0209051_10010808 357
32 3300025304 Ga0209257_1001021 Ga0209257_100102119 357
33 3300042184 Ga0450908_000006 Ga0450908_000006_21889_23040 358
34 3300025298 Ga0209050_1022229 Ga0209050_10222292 359
35 3300048927 Ga0496124_0000455 Ga0496124_0000455_9320_10456 359
36 3300048928 Ga0496125_0130194 Ga0496125_0130194_333_1502 359
37 3300046660 Ga0495625_0096333 Ga0495625_0096333_691_1917 360
38 3300002773 JGI25152J39213_1013035 JGI25152J39213_10130352 361
39 3300025254 Ga0209148_1001867 Ga0209148_10018678 361
40 3300025258 Ga0209129_1000392 Ga0209129_10003925 361
41 3300025297 Ga0209758_1007929 Ga0209758_10079294 361
42 3300046558 Ga0495633_0003393 Ga0495633_0003393_1858_2994 366
43 3300003578 Ga0006562J51391_1030999 Ga0006562J51391_10309992 367
44 3300048919 Ga0496116_0000987 Ga0496116_0000987_21199_22305 367
45 iso_pu_bacteria 2593339239 2595452802 368
46 iso_pu_bacteria 2547132130 2547502772 369
47 iso_pu_bacteria 2816332141 2816519742 369
48 iso_pu_bacteria 2842391507 2842393311 369
49 iso_pu_bacteria 2919134579 2919138621 369
50 iso_pu_bacteria 2919404418 2919407834 369
51 iso_pu_bacteria 2961064222 2961068043 369
52 3300048927 Ga0496124_0000282 Ga0496124_0000282_23276_24457 370
53 iso_pu_bacteria 2747842428 2747947596 370
54 iso_pu_bacteria 2765235840 2765577138 370
55 iso_pu_bacteria 2874220319 2874223952 370
56 iso_pu_bacteria 2919089067 2919090105 370
57 iso_pu_bacteria 2928496128 2928498074 370
58 iso_pu_bacteria 2931380184 2931382588 370
59 iso_pu_bacteria 2937610967 2937613579 370
60 iso_pu_bacteria 2939626828 2939627997 370
61 iso_pu_bacteria 2961047084 2961050716 370
62 3300003320 rootH2_10013664 rootH2_100136646 373
63 3300003856 Ga0058692_1000005 Ga0058692_1000005148 373
64 3300006186 Ga0075369_10005597 Ga0075369_100055974 373
65 3300027312 Ga0209371_1000031 Ga0209371_1000031146 373
66 3300030500 Ga0268256_1000034 Ga0268256_1000034205 373
67 3300048907 Ga0496104_0401269 Ga0496104_0401269_148_1272 373
68 3300048920 Ga0496117_0172930 Ga0496117_0172930_94_1218 373
69 3300048922 Ga0496119_0096075 Ga0496119_0096075_127_1251 373
70 3300048923 Ga0496120_0086681 Ga0496120_0086681_138_1262 373
71 iso_pu_bacteria 2576861471 2578460168 373
72 iso_pu_bacteria 2593339238 2595449067 373
73 iso_pu_bacteria 2718218334 2721025733 373
74 iso_pu_bacteria 2738543009 2739225716 373
75 iso_pu_bacteria 2842757796 2842760945 373
76 iso_pu_bacteria 2842780639 2842781182 373
77 iso_pu_bacteria 2842918807 2842920726 373
78 iso_pu_bacteria 2852649853 2852650492 373
79 iso_pu_bacteria 2857442823 2857443580 373
80 iso_pu_bacteria 2884338543 2884339061 373
81 iso_pu_bacteria 2939589442 2939592668 373
82 iso_pu_bacteria 2939622612 2939623384 373
83 iso_pu_bacteria 2941475908 2941476138 373
84 iso_pu_bacteria 2953994433 2953996004 373
85 iso_pu_bacteria 2974307012 2974310604 373
86 iso_pu_bacteria 2977247770 2977251351 373
87 iso_pu_bacteria 2984514374 2984518022 373
88 iso_pu_bacteria 2987605356 2987608209 373
89 3300005289 Ga0065704_10028386 Ga0065704_100283862 374
90 3300005347 Ga0070668_100000821 Ga0070668_1000008219 374
91 3300005548 Ga0070665_100010527 Ga0070665_1000105275 374
92 3300013102 Ga0157371_10123195 Ga0157371_101231952 374
93 3300013102 Ga0157371_10124710 Ga0157371_101247102 374
94 3300025972 Ga0207668_10000469 Ga0207668_1000046912 374
95 3300028379 Ga0268266_10018973 Ga0268266_100189735 374
96 3300031911 Ga0307412_10001990 Ga0307412_100019908 374
97 3300042115 Ga0450911_001145 Ga0450911_001145_997_2124 374
98 3300046525 Ga0495663_0002336 Ga0495663_0002336_4419_5546 374
99 3300046558 Ga0495633_0007051 Ga0495633_0007051_4287_5414 374
100 3300048909 Ga0496106_0090273 Ga0496106_0090273_233_1360 374
101 3300048916 Ga0496113_0223927 Ga0496113_0223927_183_1310 374
102 3300048921 Ga0496118_0012309 Ga0496118_0012309_3985_5112 374
103 3300048922 Ga0496119_0006489 Ga0496119_0006489_665_1834 374
104 3300048922 Ga0496119_0046865 Ga0496119_0046865_1479_2606 374
105 3300048924 Ga0496121_0013451 Ga0496121_0013451_603_1730 374
106 3300048924 Ga0496121_0029252 Ga0496121_0029252_234_1361 374
107 3300048928 Ga0496125_0022955 Ga0496125_0022955_245_1372 374
108 3300046810 Ga0495660_0005918 Ga0495660_0005918_1562_2692 375
109 3300003781 Ga0055536_1004317 Ga0055536_10043171 376
110 3300003794 Ga0055531_10005604 Ga0055531_100056041 376
111 3300015261 Ga0182006_1003914 Ga0182006_10039144 376
112 3300025292 Ga0209676_1001589 Ga0209676_100158911 376
113 3300025299 Ga0209256_1002021 Ga0209256_10020216 376
114 3300025304 Ga0209257_1000666 Ga0209257_10006668 376
115 iso_pu_bacteria 2643221562 2643831535 376
116 3300002075 JGI24738J21930_10000953 JGI24738J21930_100009535 377
117 3300003771 Ga0055526_1000087 Ga0055526_100008781 377
118 3300003773 Ga0055537_1000105 Ga0055537_100010525 377
119 3300003784 Ga0055534_1000125 Ga0055534_10001256 377
120 3300003790 Ga0055528_1000381 Ga0055528_10003816 377
121 3300003794 Ga0055531_10033754 Ga0055531_100337542 377
122 3300005262 Ga0065165_1000205 Ga0065165_100020525 377
123 3300005289 Ga0065704_10122132 Ga0065704_101221321 377
124 3300005353 Ga0070669_100083507 Ga0070669_1000835073 377
125 3300005548 Ga0070665_100049263 Ga0070665_1000492632 377
126 3300013102 Ga0157371_10000209 Ga0157371_1000020962 377
127 3300013102 Ga0157371_10108164 Ga0157371_101081642 377
128 3300013104 Ga0157370_10017326 Ga0157370_100173266 377
129 3300013306 Ga0163162_10149031 Ga0163162_101490312 377
130 3300014497 Ga0182008_10000031 Ga0182008_1000003137 377
131 3300014497 Ga0182008_10004514 Ga0182008_100045145 377
132 3300015261 Ga0182006_1000171 Ga0182006_100017130 377
133 3300015261 Ga0182006_1006178 Ga0182006_10061783 377
134 3300015262 Ga0182007_10000004 Ga0182007_1000000446 377
135 3300015262 Ga0182007_10026313 Ga0182007_100263132 377
136 3300015265 Ga0182005_1001004 Ga0182005_100100412 377
137 3300015265 Ga0182005_1004131 Ga0182005_10041312 377
138 3300015265 Ga0182005_1023890 Ga0182005_10238902 377
139 3300015265 Ga0182005_1023913 Ga0182005_10239132 377
140 3300017792 Ga0163161_10000436 Ga0163161_1000043626 377
141 3300017792 Ga0163161_10007097 Ga0163161_100070976 377
142 3300017792 Ga0163161_10017425 Ga0163161_100174254 377
143 3300025226 Ga0209674_102991 Ga0209674_1029912 377
144 3300025233 Ga0209437_101036 Ga0209437_1010364 377
145 3300025263 Ga0209565_1000033 Ga0209565_100003339 377
146 3300025273 Ga0209673_1000205 Ga0209673_10002059 377
147 3300025291 Ga0209675_1000018 Ga0209675_1000018140 377
148 3300025295 Ga0209564_1000568 Ga0209564_100056834 377
149 3300025302 Ga0207426_1004892 Ga0207426_10048922 377
150 3300025304 Ga0209257_1000180 Ga0209257_100018090 377
151 3300025304 Ga0209257_1006873 Ga0209257_10068733 377
152 3300025904 Ga0207647_10000013 Ga0207647_1000001350 377
153 3300025920 Ga0207649_10140052 Ga0207649_101400522 377
154 3300030742 Ga0316183_1002809 Ga0316183_10028092 377
155 3300031911 Ga0307412_10000497 Ga0307412_100004979 377
156 3300041404 Ga0439436_0000005 Ga0439436_0000005_129836_130969 377
157 3300041413 Ga0439465_0000093 Ga0439465_0000093_192_1325 377
158 3300042006 Ga0439432_003860 Ga0439432_003860_2026_3162 377
159 3300042006 Ga0439432_017994 Ga0439432_017994_875_2101 377
160 3300042533 Ga0450901_000884 Ga0450901_000884_984_2135 377
161 3300044672 Ga0466982_0000027 Ga0466982_0000027_32729_33862 377
162 3300046453 Ga0495627_003249 Ga0495627_003249_6136_7272 377
163 3300046453 Ga0495627_010142 Ga0495627_010142_712_1848 377
164 3300046457 Ga0495590_0021359 Ga0495590_0021359_376_1527 377
165 3300046460 Ga0495638_0000536 Ga0495638_0000536_28729_29880 377
166 3300046460 Ga0495638_0000877 Ga0495638_0000877_6144_7280 377
167 3300046460 Ga0495638_0036522 Ga0495638_0036522_667_1893 377
168 3300046471 Ga0495650_0001908 Ga0495650_0001908_1695_2846 377
169 3300046471 Ga0495650_0027364 Ga0495650_0027364_1411_2547 377
170 3300046491 Ga0495584_0001814 Ga0495584_0001814_7224_8360 377
171 3300046492 Ga0495585_0000999 Ga0495585_0000999_13985_15136 377
172 3300046501 Ga0495607_0000196 Ga0495607_0000196_48822_49973 377
173 3300046501 Ga0495607_0004741 Ga0495607_0004741_3100_4239 377
174 3300046506 Ga0495583_0019447 Ga0495583_0019447_2378_3529 377
175 3300046507 Ga0495606_0000222 Ga0495606_0000222_56476_57612 377
176 3300046507 Ga0495606_0003796 Ga0495606_0003796_7722_8855 377
177 3300046507 Ga0495606_0005641 Ga0495606_0005641_6389_7540 377
178 3300046507 Ga0495606_0012190 Ga0495606_0012190_3734_4873 377
179 3300046507 Ga0495606_0045814 Ga0495606_0045814_372_1505 377
180 3300046512 Ga0495610_0006452 Ga0495610_0006452_5584_6717 377
181 3300046512 Ga0495610_0010726 Ga0495610_0010726_4193_5344 377
182 3300046512 Ga0495610_0022611 Ga0495610_0022611_1008_2147 377
183 3300046513 Ga0495616_0000056 Ga0495616_0000056_43453_44589 377
184 3300046513 Ga0495616_0018941 Ga0495616_0018941_727_1863 377
185 3300046513 Ga0495616_0103539 Ga0495616_0103539_87_1226 377
186 3300046515 Ga0495620_0000789 Ga0495620_0000789_2646_3797 377
187 3300046518 Ga0495631_0000120 Ga0495631_0000120_35859_37010 377
188 3300046518 Ga0495631_0000595 Ga0495631_0000595_8466_9617 377
189 3300046519 Ga0495632_0000014 Ga0495632_0000014_80369_81502 377
190 3300046519 Ga0495632_0006581 Ga0495632_0006581_6117_7268 377
191 3300046519 Ga0495632_0018706 Ga0495632_0018706_75_1211 377
192 3300046519 Ga0495632_0086402 Ga0495632_0086402_262_1413 377
193 3300046520 Ga0495637_0016089 Ga0495637_0016089_933_2084 377
194 3300046522 Ga0495643_0000363 Ga0495643_0000363_45976_47112 377
195 3300046524 Ga0495648_0001431 Ga0495648_0001431_13953_15104 377
196 3300046525 Ga0495663_0000442 Ga0495663_0000442_4784_5920 377
197 3300046525 Ga0495663_0002739 Ga0495663_0002739_302_1438 377
198 3300046648 Ga0495611_0000034 Ga0495611_0000034_75289_76440 377
199 3300046648 Ga0495611_0000078 Ga0495611_0000078_15667_16818 377
200 3300046660 Ga0495625_0000002 Ga0495625_0000002_785325_786476 377
201 3300046660 Ga0495625_0001745 Ga0495625_0001745_17993_19144 377
202 3300046660 Ga0495625_0054043 Ga0495625_0054043_953_2179 377
203 3300046660 Ga0495625_0090209 Ga0495625_0090209_490_1626 377
204 3300046665 Ga0495661_0001142 Ga0495661_0001142_8097_9248 377
205 3300046665 Ga0495661_0091237 Ga0495661_0091237_122_1273 377
206 3300046691 Ga0495670_0000166 Ga0495670_0000166_11618_12751 377
207 3300046691 Ga0495670_0001707 Ga0495670_0001707_1818_2969 377
208 3300046691 Ga0495670_0020670 Ga0495670_0020670_2054_3190 377
209 3300046694 Ga0495649_0004145 Ga0495649_0004145_3199_4332 377
210 3300046794 Ga0495589_0000192 Ga0495589_0000192_13006_14157 377
211 3300046810 Ga0495660_0000156 Ga0495660_0000156_47286_48437 377
212 3300046810 Ga0495660_0000273 Ga0495660_0000273_35811_36962 377
213 3300047320 Ga0495672_0000330 Ga0495672_0000330_46218_47354 377
214 3300047323 Ga0495683_0001529 Ga0495683_0001529_10738_11874 377
215 3300047446 Ga0495679_000003 Ga0495679_000003_13970_15121 377
216 3300047469 Ga0495673_0000004 Ga0495673_0000004_988575_989726 377
217 3300047469 Ga0495673_0000127 Ga0495673_0000127_95311_96462 377
218 3300047469 Ga0495673_0001542 Ga0495673_0001542_12968_14119 377
219 3300047470 Ga0495681_0019559 Ga0495681_0019559_1922_3058 377
220 3300047472 Ga0495686_0000024 Ga0495686_0000024_228663_229814 377
221 3300047472 Ga0495686_0000375 Ga0495686_0000375_18661_19797 377
222 3300047472 Ga0495686_0005144 Ga0495686_0005144_5415_6641 377
223 3300047472 Ga0495686_0006156 Ga0495686_0006156_643_1779 377
224 3300047472 Ga0495686_0028419 Ga0495686_0028419_2134_3285 377
225 3300048903 Ga0496100_0010154 Ga0496100_0010154_3986_5137 377
226 3300048904 Ga0496101_0000359 Ga0496101_0000359_5040_6191 377
227 3300048908 Ga0496105_0071317 Ga0496105_0071317_1017_2153 377
228 3300048909 Ga0496106_0000887 Ga0496106_0000887_875_2011 377
229 3300048913 Ga0496110_0089731 Ga0496110_0089731_574_1710 377
230 3300048919 Ga0496116_0000754 Ga0496116_0000754_30676_31812 377
231 3300048919 Ga0496116_0044314 Ga0496116_0044314_552_1688 377
232 3300048920 Ga0496117_0002699 Ga0496117_0002699_15418_16554 377
233 3300048920 Ga0496117_0004543 Ga0496117_0004543_216_1352 377
234 3300048920 Ga0496117_0013352 Ga0496117_0013352_5890_7026 377
235 3300048920 Ga0496117_0165735 Ga0496117_0165735_87_1238 377
236 3300048921 Ga0496118_0000510 Ga0496118_0000510_45772_46908 377
237 3300048921 Ga0496118_0000714 Ga0496118_0000714_4011_5162 377
238 3300048921 Ga0496118_0001108 Ga0496118_0001108_35295_36431 377
239 3300048921 Ga0496118_0011272 Ga0496118_0011272_5839_6975 377
240 3300048921 Ga0496118_0041464 Ga0496118_0041464_1895_3031 377
241 3300048921 Ga0496118_0052059 Ga0496118_0052059_107_1243 377
242 3300048921 Ga0496118_0058834 Ga0496118_0058834_149_1285 377
243 3300048921 Ga0496118_0060101 Ga0496118_0060101_1494_2630 377
244 3300048922 Ga0496119_0000047 Ga0496119_0000047_77300_78436 377
245 3300048922 Ga0496119_0019908 Ga0496119_0019908_2639_3772 377
246 3300048922 Ga0496119_0115910 Ga0496119_0115910_208_1344 377
247 3300048923 Ga0496120_0000260 Ga0496120_0000260_78208_79344 377
248 3300048924 Ga0496121_0000829 Ga0496121_0000829_51139_52290 377
249 3300048924 Ga0496121_0001307 Ga0496121_0001307_25480_26616 377
250 3300048924 Ga0496121_0002059 Ga0496121_0002059_6677_7813 377
251 3300048924 Ga0496121_0005297 Ga0496121_0005297_6121_7272 377
252 3300048924 Ga0496121_0032511 Ga0496121_0032511_91_1227 377
253 3300048924 Ga0496121_0111177 Ga0496121_0111177_214_1350 377
254 3300048925 Ga0496122_0007580 Ga0496122_0007580_170_1306 377
255 3300048925 Ga0496122_0010571 Ga0496122_0010571_8177_9313 377
256 3300048925 Ga0496122_0014374 Ga0496122_0014374_773_1909 377
257 3300048925 Ga0496122_0025931 Ga0496122_0025931_1082_2233 377
258 3300048925 Ga0496122_0038563 Ga0496122_0038563_694_1845 377
259 3300048925 Ga0496122_0043699 Ga0496122_0043699_331_1557 377
260 3300048925 Ga0496122_0044798 Ga0496122_0044798_73_1224 377
261 3300048926 Ga0496123_0001582 Ga0496123_0001582_22781_23932 377
262 3300048926 Ga0496123_0006858 Ga0496123_0006858_7763_8914 377
263 3300048926 Ga0496123_0011488 Ga0496123_0011488_102_1238 377
264 3300048926 Ga0496123_0015774 Ga0496123_0015774_4178_5404 377
265 3300048926 Ga0496123_0042790 Ga0496123_0042790_541_1692 377
266 3300048926 Ga0496123_0064846 Ga0496123_0064846_170_1306 377
267 3300048926 Ga0496123_0101588 Ga0496123_0101588_170_1306 377
268 3300048927 Ga0496124_0000009 Ga0496124_0000009_79005_80144 377
269 3300048927 Ga0496124_0003607 Ga0496124_0003607_4225_5361 377
270 3300048927 Ga0496124_0084450 Ga0496124_0084450_166_1302 377
271 3300048927 Ga0496124_0099050 Ga0496124_0099050_1063_2199 377
272 3300048927 Ga0496124_0126962 Ga0496124_0126962_42_1178 377
273 3300048927 Ga0496124_0142736 Ga0496124_0142736_690_1826 377
274 3300048927 Ga0496124_0166329 Ga0496124_0166329_216_1352 377
275 3300048928 Ga0496125_0001130 Ga0496125_0001130_152_1288 377
276 3300048928 Ga0496125_0002397 Ga0496125_0002397_21338_22489 377
277 3300048928 Ga0496125_0003876 Ga0496125_0003876_9584_10720 377
278 3300048928 Ga0496125_0008465 Ga0496125_0008465_119_1255 377
279 3300048928 Ga0496125_0012661 Ga0496125_0012661_7061_8197 377
280 3300048928 Ga0496125_0026971 Ga0496125_0026971_833_1969 377
281 3300048928 Ga0496125_0049961 Ga0496125_0049961_929_2149 377
282 3300048929 Ga0496126_0000238 Ga0496126_0000238_9530_10666 377
283 3300048929 Ga0496126_0039753 Ga0496126_0039753_784_2010 377
284 3300048929 Ga0496126_0172090 Ga0496126_0172090_54_1190 377
285 3300049459 Ga0495678_000026 Ga0495678_000026_211836_212987 377
286 3300049460 Ga0495682_0002904 Ga0495682_0002904_87_1238 377
287 3300053087 Ga0500643_000138 Ga0500643_000138_23924_25075 377
288 3300053103 Ga0500555_000108 Ga0500555_000108_5043_6194 377
289 3300053128 Ga0500626_050506 Ga0500626_050506_659_1795 377
290 3300053160 Ga0500633_0000668 Ga0500633_0000668_3914_5065 377
291 3300053730 Ga0500645_001061 Ga0500645_001061_8257_9408 377
292 iso_pu_bacteria 2842914999 2842917169 377

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01636

APH

Phosphotransferase enzyme family

82

340

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ppq-assembly1.cif.gz_A-2 crystal structure of the homoserine kinase from agrobacterium tumefaciens 0.7351 23 360
2ppq-assembly1.cif.gz_A-2 crystal structure of the homoserine kinase from agrobacterium tumefaciens 0.7222 23 360
3tdw-assembly1.cif.gz_A the gdp complex of the aminoglycoside 2'-phosphotransfere-iiia f108l mutant 0.6979 23 363
3tdw-assembly1.cif.gz_A the gdp complex of the aminoglycoside 2'-phosphotransfere-iiia f108l mutant 0.69 23 363
6ctz-assembly1.cif.gz_A "structure of the gdp and kanamycin complex of aph(2"")-iiia" 0.6776 24 359
ID Description Score Start End Superfamily
af_P0C0K3_17_108_3.30.200.70 Alpha Beta;2-Layer Sandwich;Phosphorylase Kinase; domain 1; 0.8908 41 122 3.30.200.70
af_Q2FV31_3_86_3.30.200.20 Alpha Beta;2-Layer Sandwich;Phosphorylase Kinase; domain 1;Phosphorylase Kinase; domain 1 0.837 41 121 3.30.200.20
af_P0C0K3_17_108_3.30.200.70 Alpha Beta;2-Layer Sandwich;Phosphorylase Kinase; domain 1; 0.7927 41 122 3.30.200.70
af_Q4DMM9_2_90_3.30.200.20 Alpha Beta;2-Layer Sandwich;Phosphorylase Kinase; domain 1;Phosphorylase Kinase; domain 1 0.7523 22 121 3.30.200.20
af_Q4DMM9_2_90_3.30.200.20 Alpha Beta;2-Layer Sandwich;Phosphorylase Kinase; domain 1;Phosphorylase Kinase; domain 1 0.7452 22 121 3.30.200.20
ID Description Score Start End GO Terms
AF-A0A833GM57-F1-model_v4 Phosphotransferase 0.9866 140 374 GO:0004413
GO:0009088
AF-A0A1K1RQX7-F1-model_v4 Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist 0.9805 1 376 GO:0004413
GO:0009088
AF-M4NJ57-F1-model_v4 Putative homoserine kinase type II (Protein kinase fold) 0.9759 1 377 GO:0004413
GO:0009088
AF-A0A1K1RQX7-F1-model_v4 Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist 0.9754 1 376 GO:0004413
GO:0009088
AF-A0A833GM57-F1-model_v4 Phosphotransferase 0.9742 140 374 GO:0004413
GO:0009088

Feature Viewer

pLDDT pTM Quality
90 0.9 High
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Predicted Structure (AlphaFold2)

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